ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chl... 262 4e-70
2GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chl... 233 3e-61
3GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, ... 229 3e-60
4GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, ... 214 8e-56
5GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (E... 173 3e-43
6GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC ... 164 1e-40
7GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC ... 146 3e-35
8GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC ... 144 1e-34
9GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precu... 115 5e-26
10GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (E... 112 5e-25
11GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precu... 111 1e-24
12GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precu... 107 2e-23
13GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.... 106 3e-23
14GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1... 100 2e-21
15GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4... 73 4e-13
16DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein) 32 0.78
17MINC_THEMA (Q9X0D7) Probable septum site-determining protein minC 32 1.3
18NARG_BACSU (P42175) Nitrate reductase alpha chain (EC 1.7.99.4) 30 3.0
19Y1350_METJA (Q58745) Hypothetical protein MJ1350 30 3.9
20APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2 30 3.9
21ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor ... 30 3.9
22HFW1_DROPS (P84329) Protein halfway (Protein singed wings) 29 6.6
23NEUT_HUMAN (P30990) Neurotensin/neuromedin N precursor [Contains... 29 6.6
24DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein) 29 6.6
25SYD_SALTY (Q8ZNV2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 29 6.6
26SYD_SALTI (Q8Z5W1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 29 6.6
27SYD_SALPA (Q5PMZ6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 29 6.6
28SYD_ECOL6 (Q8FGQ9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 29 6.6
29PEX5_HUMAN (P50542) Peroxisomal targeting signal 1 receptor (Per... 29 8.6
30TRUB_BACSK (Q5WFU5) tRNA pseudouridine synthase B (EC 5.4.99.-) ... 29 8.6
31FMDC_METBF (Q48943) Molybdenum-containing formylmethanofuran deh... 29 8.6

>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  262 bits (670), Expect = 4e-70
 Identities = 130/142 (91%), Positives = 132/142 (92%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNSL QAVVEGTGDHCCEYMTGGCVVVLGK GRNVAAGMTGGLAY+LDEDDTLVPKV
Sbjct: 1475 FAVRNSLCQAVVEGTGDHCCEYMTGGCVVVLGKAGRNVAAGMTGGLAYILDEDDTLVPKV 1534

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  IL EWEAYLPLFWQLVPPSEEDS
Sbjct: 1535 NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAILREWEAYLPLFWQLVPPSEEDS 1594

Query: 361  PEACAEFERVLARQKTAVQSAK 426
            PEACAEFERVLA+Q T   SAK
Sbjct: 1595 PEACAEFERVLAKQATTQLSAK 1616



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>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  233 bits (593), Expect = 3e-61
 Identities = 112/141 (79%), Positives = 127/141 (90%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNSL +AVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAY+LDEDDTL+PKV
Sbjct: 1378 FAVRNSLAEAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKV 1437

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            NKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL +W+ YLPLFWQLVPPSEED+
Sbjct: 1438 NKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASILKDWDKYLPLFWQLVPPSEEDT 1497

Query: 361  PEACAEFERVLARQKTAVQSA 423
            PEA A FE+ +  +  ++QSA
Sbjct: 1498 PEASAMFEQ-MTSEGASLQSA 1517



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>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  229 bits (585), Expect = 3e-60
 Identities = 109/136 (80%), Positives = 123/136 (90%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNSL +AVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAY+LDEDDTL+PK+
Sbjct: 1509 FAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYLLDEDDTLLPKI 1568

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL+EWE YLPLFWQLVPPSEED+
Sbjct: 1569 NREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLPLFWQLVPPSEEDT 1628

Query: 361  PEACAEFERVLARQKT 408
            PEA A + R    + T
Sbjct: 1629 PEASAAYVRTSTGEVT 1644



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>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  214 bits (546), Expect = 8e-56
 Identities = 100/123 (81%), Positives = 114/123 (92%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNSL QAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAY+LDED+TL+PK+
Sbjct: 1484 FAVRNSLAQAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDNTLLPKM 1543

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+ EW+ YL +FWQLVPPSEED+
Sbjct: 1544 NKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKYLAMFWQLVPPSEEDT 1603

Query: 361  PEA 369
            PEA
Sbjct: 1604 PEA 1606



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>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score =  173 bits (438), Expect = 3e-43
 Identities = 83/123 (67%), Positives = 95/123 (77%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNS+G+AV+EG GDHCCEYMTGG +VVLG VGRNV AGMTGGLAY LDE   L  K+
Sbjct: 1419 FAVRNSVGKAVIEGAGDHCCEYMTGGVIVVLGPVGRNVGAGMTGGLAYFLDEVGDLPEKI 1478

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL+ W  YL  FWQ VPPSE+DS
Sbjct: 1479 NPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLGKFWQAVPPSEKDS 1538

Query: 361  PEA 369
            PEA
Sbjct: 1539 PEA 1541



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>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score =  164 bits (415), Expect = 1e-40
 Identities = 79/122 (64%), Positives = 91/122 (74%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNSL ++VVEG GDH CEYMTGG +VVLGK GRNV AGMTGGLAY LDE++  + +V
Sbjct: 1404 FAVRNSLAKSVVEGVGDHACEYMTGGTIVVLGKAGRNVGAGMTGGLAYFLDEENKFIERV 1463

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N EIVK+QRV   AG+ QLK LIE +  KTGS K   IL  W  YLP FWQ+VPPSE + 
Sbjct: 1464 NSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNILENWNTYLPQFWQVVPPSEANI 1523

Query: 361  PE 366
             E
Sbjct: 1524 EE 1525



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>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score =  146 bits (369), Expect = 3e-35
 Identities = 73/122 (59%), Positives = 88/122 (72%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNS   +V+EG GDH CEYMTGG VVVLGK GRN+AAGMTGG+AY LDE   L  KV
Sbjct: 1416 FAVRNSNAFSVLEGVGDHACEYMTGGRVVVLGKAGRNIAAGMTGGIAYFLDEYSNLPEKV 1475

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N +IV++QRV     + QL  LIE +V KTGS K   IL +WE ++  FWQ+VPPSE ++
Sbjct: 1476 NLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLILQQWEIFIHYFWQIVPPSESET 1535

Query: 361  PE 366
             E
Sbjct: 1536 SE 1537



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>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score =  144 bits (364), Expect = 1e-34
 Identities = 71/118 (60%), Positives = 84/118 (71%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNS G +VVEG GDH CEYMTGG +VVLG  GRN+ AGMTGG+AY LDED+TL  K+
Sbjct: 1404 FAVRNSNGYSVVEGVGDHACEYMTGGLIVVLGTFGRNIGAGMTGGIAYFLDEDNTLKNKL 1463

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 354
            N EIVK QR+     + QLK ++E Y  KT S K   IL  W  YL  F+Q+VPPSE+
Sbjct: 1464 NTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLILDNWSQYLAKFYQIVPPSEQ 1521



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>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score =  115 bits (289), Expect = 5e-26
 Identities = 60/114 (52%), Positives = 76/114 (66%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNS    VVEG G + CEYMTGG  V+LG+VG N AAGMTGG+AY+ D DD+L   +
Sbjct: 1382 FAVRNSGATVVVEGCGSNGCEYMTGGTAVILGRVGDNFAAGMTGGMAYVYDLDDSLPLYI 1441

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 342
            N E V  QR+     + QLK LIE +V +T S   A+IL++W   +  FWQ+VP
Sbjct: 1442 NDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWAREVTKFWQVVP 1495



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>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1550

 Score =  112 bits (281), Expect = 5e-25
 Identities = 60/140 (42%), Positives = 85/140 (60%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            F VRNS    VVE  GDH CEYMTGG VVVLG+ GRN AAGM+GG+AY+ DE      + 
Sbjct: 1396 FCVRNSGVNTVVEAVGDHGCEYMTGGKVVVLGQTGRNFAAGMSGGVAYIFDETGDFATRC 1455

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N  +V ++++  P     LK LI+ +V  T S KG  +L++WEA +P F +++P      
Sbjct: 1456 NSAMVGLEKLEDPEEIKDLKELIQNHVNYTDSAKGKAVLADWEASIPKFVKVMP------ 1509

Query: 361  PEACAEFERVLARQKTAVQS 420
                 +++RVL   K A+++
Sbjct: 1510 ----RDYKRVLQAIKKALEA 1525



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>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC|
            1.4.1.14) (NADH-GOGAT)
          Length = 2194

 Score =  111 bits (278), Expect = 1e-24
 Identities = 63/140 (45%), Positives = 83/140 (59%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            F VRNS   AVVEG GDH CEYMTGG VVVLGK GRN AAGM+GG+AY+LD D T   + 
Sbjct: 1495 FCVRNSGALAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDVDGTFQSRC 1554

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N E+V + +V      + L+ LI+ +   T S    ++L ++E  LP F ++ P      
Sbjct: 1555 NLELVDLDKVEEEEDIITLRMLIQQHQRHTNSLLAKEVLVDFENLLPKFVKVFP------ 1608

Query: 361  PEACAEFERVLARQKTAVQS 420
                 E++RVLA  K+   S
Sbjct: 1609 ----REYKRVLASMKSDAAS 1624



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>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score =  107 bits (267), Expect = 2e-23
 Identities = 62/140 (44%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            F VRNS    VVEG GD+ CEYMTGG V +LGK G N  AGMTGG AY+LDE      +V
Sbjct: 1379 FGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRV 1438

Query: 181  NKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEED 357
            N E+V++  V+A A  +  L+GLI  +V+ TGS +G +IL+ W  +   F  LV P   D
Sbjct: 1439 NPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKF-ALVKPKSSD 1497

Query: 358  SPEACAEFERVLARQKTAVQ 417
                     R  A  +   Q
Sbjct: 1498 VKALLGHRSRSAAELRVQAQ 1517



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>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score =  106 bits (265), Expect = 3e-23
 Identities = 62/142 (43%), Positives = 83/142 (58%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKV 180
            FAVRNS   AVVEG GDH CEYMTGG VV+LG  GRN AAGM+GG+AY+ D       K+
Sbjct: 1438 FAVRNSGAIAVVEGVGDHGCEYMTGGRVVILGSTGRNFAAGMSGGIAYVYDMQMDFAGKI 1497

Query: 181  NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEEDS 360
            N E+V +  V   A    L+GLI+ +   TGS    +ILS++  +L  F +++P      
Sbjct: 1498 NTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRILSDFPRHLSRFVKVLP------ 1551

Query: 361  PEACAEFERVLARQKTAVQSAK 426
                 E++ VL R+    + AK
Sbjct: 1552 ----REYKAVLEREAAKKEEAK 1569



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>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score =  100 bits (250), Expect = 2e-21
 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDED-DTLVPK 177
            FAVRNS    VVEG GDH CEYMTGG VVVLG VG+N AAGM+GG+AY+L ED      K
Sbjct: 1357 FAVRNSGVNVVVEGIGDHGCEYMTGGSVVVLGDVGKNFAAGMSGGIAYVLTEDVKRFKRK 1416

Query: 178  VNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVP 342
             N E++  + +       Q+K ++E +   T S K   +L +WE  +  F +++P
Sbjct: 1417 CNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDLLDQWEDSVKKFVKVIP 1471



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>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2144

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
 Frame = +1

Query: 1    FAVRNSLGQAVVEGT-GDHCCEYMTGGCVVVLGKV-GRNVAAGMTGGLAYMLDED-DTLV 171
            F VRNS    VVE   G++  EYMTGG  +VL ++   N  +G TGG+AY L  D D  V
Sbjct: 1430 FGVRNSGATIVVERIKGNNAFEYMTGGRAIVLSQMESLNAFSGATGGIAYCLTSDYDDFV 1489

Query: 172  PKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSE 351
             K+NK+ V+++ +  P     +K LI+ +   T S   A+IL  +  YL  F +++P   
Sbjct: 1490 GKINKDTVELESLCDPVEIAFVKNLIQEHWNYTQSDLAARILGNFNHYLKDFVKVIP--- 1546

Query: 352  EDSPEACAEFERVLARQKTAVQSAK 426
                    ++++VL ++K     AK
Sbjct: 1547 -------TDYKKVLLKEKAEAAKAK 1564



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>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 320  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 442
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307



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>MINC_THEMA (Q9X0D7) Probable septum site-determining protein minC|
          Length = 210

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 22  GQAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGG 135
           G  +V G  +   E + GG VVV GK   N+ AG+  G
Sbjct: 118 GDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEG 155



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>NARG_BACSU (P42175) Nitrate reductase alpha chain (EC 1.7.99.4)|
          Length = 1228

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
 Frame = +1

Query: 100  VGRNVAAGMTG--GLAYML-DEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKT 270
            +G NVA   +G  G+++ + DE ++L  ++  EI             + K   EA +  +
Sbjct: 896  LGPNVALKPSGTKGMSWSIADEYESLKQRLG-EITSDSVAKGCPNISEAKQAAEAILTLS 954

Query: 271  GSTKGAKILSEWEAYLPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQS 420
             ++ G   +  WE+   +    +    E+  E C  FE++ A+ KT + S
Sbjct: 955  STSNGKVAVKAWESLENITNLKLKDLAEEREEECFTFEQITAQPKTVITS 1004



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>Y1350_METJA (Q58745) Hypothetical protein MJ1350|
          Length = 261

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 10/48 (20%)
 Frame = +1

Query: 49  DHCCEYMTGGCVVV---------LGKV-GRNVAAGMTGGLAYMLDEDD 162
           D   EYM GG ++V         LGKV GR +  G+ GG  Y+  E D
Sbjct: 147 DFLGEYMAGGIIIVLNIDEKGNDLGKVKGRMIGTGIHGGAIYIRGEID 194



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>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = -1

Query: 360 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 193
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 192 NLLVNLWD 169
           ++ V LWD
Sbjct: 576 SIDVMLWD 583



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>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = +1

Query: 169 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 327
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 328 WQLVPPSEEDSP-EAC 372
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80



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>HFW1_DROPS (P84329) Protein halfway (Protein singed wings)|
          Length = 587

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 60  RVHDWWMCSCTRQSWKKRCSRNDRWPSLHV 149
           + + W+ C+ ++ S    CS   +W +LHV
Sbjct: 176 KANSWYCCNISQMSMISSCSNISKWTNLHV 205



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>NEUT_HUMAN (P30990) Neurotensin/neuromedin N precursor [Contains: Large|
           neuromedin N (NmN-125); Neuromedin N (NmN) (NN);
           Neurotensin (NT); Tail peptide]
          Length = 170

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -1

Query: 321 WQICLPLAQNFSTFRAARFFNIGLNQALELHLPSWSINSLHLDNLLVNL 175
           W +C    +      A    N+  ++  + H+PSW +  L++ +L+ NL
Sbjct: 20  WSLCSDSEEEMKALEADFLTNMHTSKISKAHVPSWKMTLLNVCSLVNNL 68



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>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3027

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 323  SSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 442
            +S S  HP KKTL + + SL + + GKK  ++   D   S
Sbjct: 1270 NSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDS 1309



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>SYD_SALTY (Q8ZNV2) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 590

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294
           GLAY+         KVN+    +  +N+P  +     ++EA +E+TG+  G  I
Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392



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>SYD_SALTI (Q8Z5W1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 590

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294
           GLAY+         KVN+    +  +N+P  +     ++EA +E+TG+  G  I
Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392



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>SYD_SALPA (Q5PMZ6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 590

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294
           GLAY+         KVN+    +  +N+P  +     ++EA +E+TG+  G  I
Sbjct: 348 GLAYI---------KVNERAKGLDGINSPVAKFLTADIVEAILERTGAQDGDMI 392



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>SYD_ECOL6 (Q8FGQ9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 590

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = +1

Query: 133 GLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKI 294
           GLAY+         KVN+    ++ +N+P  +     +IEA +E+TG+  G  I
Sbjct: 348 GLAYI---------KVNERAKGLEGINSPVAKFLNAEIIEAILERTGAQDGDMI 392



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>PEX5_HUMAN (P50542) Peroxisomal targeting signal 1 receptor (Peroxismore|
           receptor 1) (Peroxisomal C-terminal targeting signal
           import receptor) (PTS1-BP) (Peroxin-5) (PTS1 receptor)
          Length = 602

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 217 PAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLPLFWQLVPPSEE 354
           P  Q  L  L  ++  ++   +  + L +W  Y P +  LV P+EE
Sbjct: 363 PDNQTALMALAVSFTNESLQRQACETLRDWLRYTPAYAHLVTPAEE 408



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>TRUB_BACSK (Q5WFU5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 302

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
 Frame = +1

Query: 142 YMLDEDDTLVPKV-----------NKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGST 279
           YM D D T + +V           + E+V+ +RVN P  + +++ L++A++ K   T
Sbjct: 60  YMSDYDKTYIGEVTFGVATTTEDAHGEVVEEKRVNKPFTRTEIEALLQAFIGKIEQT 116



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>FMDC_METBF (Q48943) Molybdenum-containing formylmethanofuran dehydrogenase 1|
           subunit C (EC 1.2.99.5) (Molybdenum-containing
           formylmethanofuran dehydrogenase I subunit C)
          Length = 301

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
 Frame = +1

Query: 22  GQAVVEGTGDHCCEY-MTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLVPKVNKEIVK 198
           G+ +VEG     C     GG + V G   R V A M GG   +  + +   P    E V 
Sbjct: 201 GEILVEGDVKSFCGIRQNGGLIFVKGSALRGVGAEMAGGTIVIGGKIERFSP--GFEFVS 258

Query: 199 MQRVNAPAGQMQLKGLIEAYVEKTGSTKGAK 291
           M+  +  +G+++L G  + +      +K AK
Sbjct: 259 MEN-SITSGEVELIGEFKKFTGDYAISKRAK 288


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,836,164
Number of Sequences: 219361
Number of extensions: 1445973
Number of successful extensions: 4567
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4563
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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