ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472941.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
2dbj|AK069013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
3dbj|AK061463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
4gb|AY105954.1| Zea mays PCO090799 mRNA sequence 188 2e-44
5emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 111 3e-21
6emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 111 3e-21
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
8emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 111 3e-21
9gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subu... 54 6e-04
10gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence 50 0.009
11gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribos... 50 0.009
12gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompat... 50 0.009
13gb|BT016708.1| Zea mays clone Contig541 mRNA sequence 48 0.035
14gb|BT016274.1| Zea mays clone Contig107 mRNA sequence 48 0.035
15gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, com... 48 0.035
16gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiq... 48 0.035
17emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial ... 48 0.035
18gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA 48 0.035
19dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 48 0.035
20gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA ... 48 0.035
21gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA... 48 0.035
22gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds 46 0.14
23gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence 46 0.14
24gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate de... 46 0.14
25gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA 46 0.14
26gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence 46 0.14
27gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence 46 0.14
28gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA 46 0.14
29gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRN... 46 0.14
30gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA ... 46 0.14
31gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA,... 46 0.14
32gb|AY572781.1| Arabidopsis thaliana CDC48-interacting UBX-domain... 44 0.55
33ref|NM_113645.2| Arabidopsis thaliana PUX1 (PLANT UBX DOMAIN-CON... 44 0.55
34gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA 44 0.55
35emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC sy... 44 0.55
36emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processe... 44 0.55
37gb|BT024476.1| Arabidopsis thaliana At3g27310 mRNA, complete cds 44 0.55
38gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA 44 0.55
39dbj|AK175284.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.55
40dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.55
41gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda... 44 0.55
42gb|AY533301.1| Petroselinum crispum mitogen-activated protein ki... 42 2.2
43emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein ... 42 2.2
44gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9... 42 2.2
45gb|AC122449.4| Mus musculus BAC clone RP24-247O14 from chromosom... 42 2.2
46gb|AY223271.1| Schistosoma japonicum clone ZZD474 mRNA sequence 42 2.2
47emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for... 42 2.2
48dbj|AB224127.1| Aspergillus oryzae cDNA, contig sequence: AoEST0969 42 2.2
49dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box pro... 42 2.2
50dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, ... 42 2.2
51gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA,... 42 2.2
52gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin dom... 42 2.2
53gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen ... 42 2.2
54gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacti... 42 2.2
55gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobu... 42 2.2
56gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobu... 42 2.2
57dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GT... 42 2.2
58gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Ra... 42 2.2
59gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protei... 42 2.2
60gb|AY109271.1| Zea mays PCO074636 mRNA sequence 42 2.2
61gb|AY106084.1| Zea mays PCO072275 mRNA sequence 42 2.2
62gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, ... 42 2.2
63gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, c... 42 2.2
64dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalecti... 42 2.2
65gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog ... 42 2.2
66dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohorm... 42 2.2
67gb|BT016288.1| Zea mays clone Contig121 mRNA sequence 40 8.6
68gb|AY812045.1| Schistosoma japonicum SJCHGC04761 protein mRNA, p... 40 8.6
69gb|AC156164.2| Mus musculus BAC clone RP24-75M13 from chromosome... 40 8.6
70gb|BC041619.1| Homo sapiens cDNA clone IMAGE:5923662, partial cds 40 8.6
71emb|BX927368.13| Zebrafish DNA sequence from clone CH211-15J16 i... 40 8.6
72gb|BC005885.1| Homo sapiens cDNA clone IMAGE:3537164, **** WARNI... 40 8.6
73gb|BC003593.1| Homo sapiens mRNA similar to protein phosphatase ... 40 8.6
74emb|AL590668.5| Human DNA sequence from clone RP11-463L20 on chr... 40 8.6
75emb|AL162590.15| Human DNA sequence from clone RP11-54K16 on chr... 40 8.6
76gb|AC159548.5| Mus musculus 6 BAC RP23-77B7 (Roswell Park Cancer... 40 8.6
77gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, com... 40 8.6
78gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, com... 40 8.6
79gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, compl... 40 8.6
80gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, com... 40 8.6
81gb|AC153992.7| Mus musculus 6 BAC RP24-116E17 (Roswell Park Canc... 40 8.6
82gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4... 40 8.6
83gb|AF427519.1| Salmo salar CD9 protein mRNA, complete cds 40 8.6
84emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidia... 40 8.6
85gb|AY111159.1| Zea mays CL14483_-2 mRNA sequence 40 8.6
86gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome... 40 8.6
87emb|AL732515.15| Zebrafish DNA sequence from clone RP71-1K13 in ... 40 8.6
88gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3... 40 8.6
89gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3... 40 8.6 
>ref|XM_472941.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 927

 Score =  222 bits (112), Expect = 1e-54
 Identities = 193/220 (87%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatctttaca 84
           ||||| ||||| |||| | |||||||||  ||||||||||||||||||||||||| || |
Sbjct: 551 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatctctata 610

                                                                       
Query: 85  cagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggctttg 144
           ||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| ||||
Sbjct: 611 cagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggttttg 670

                                                                       
Query: 145 ttcctggagctaatgtcttcttttcttatgatctgccagaagggtcggagttaaatacgg 204
           ||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||||| |
Sbjct: 671 ttcctggggctaatgtctacttctcttatgatctgccggaaggctcagagttaaatacag 730

                                                   
Query: 205 atggtgtaaaatccggaccatatctccgtgaagaaattcg 244
           |  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 731 acagtgtaaaatcaggaccttatctccgtgaagaaattcg 770



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 361 cagcaaataagaaatcagccaaaccgaagtggttcaaaaggtga 404
           ||||||| |||||| |||| ||||| ||||||||||||||||||
Sbjct: 884 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggtga 927
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>dbj|AK069013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001P21, full
           insert sequence
          Length = 1262

 Score =  222 bits (112), Expect = 1e-54
 Identities = 193/220 (87%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatctttaca 84
           ||||| ||||| |||| | |||||||||  ||||||||||||||||||||||||| || |
Sbjct: 522 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatctctata 581

                                                                       
Query: 85  cagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggctttg 144
           ||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| ||||
Sbjct: 582 cagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggttttg 641

                                                                       
Query: 145 ttcctggagctaatgtcttcttttcttatgatctgccagaagggtcggagttaaatacgg 204
           ||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||||| |
Sbjct: 642 ttcctggggctaatgtctacttctcttatgatctgccggaaggctcagagttaaatacag 701

                                                   
Query: 205 atggtgtaaaatccggaccatatctccgtgaagaaattcg 244
           |  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 702 acagtgtaaaatcaggaccttatctccgtgaagaaattcg 741



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 361 cagcaaataagaaatcagccaaaccgaagtggttcaaaaggtga 404
           ||||||| |||||| |||| ||||| ||||||||||||||||||
Sbjct: 855 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggtga 898
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>dbj|AK061463.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B12, full
           insert sequence
          Length = 1130

 Score =  222 bits (112), Expect = 1e-54
 Identities = 193/220 (87%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatctttaca 84
           ||||| ||||| |||| | |||||||||  ||||||||||||||||||||||||| || |
Sbjct: 508 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatctctata 567

                                                                       
Query: 85  cagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggctttg 144
           ||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| ||||
Sbjct: 568 cagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggttttg 627

                                                                       
Query: 145 ttcctggagctaatgtcttcttttcttatgatctgccagaagggtcggagttaaatacgg 204
           ||||||| |||||||||| ||| |||||||||||||| ||||| || ||||||||||| |
Sbjct: 628 ttcctggggctaatgtctacttctcttatgatctgccggaaggctcagagttaaatacag 687

                                                   
Query: 205 atggtgtaaaatccggaccatatctccgtgaagaaattcg 244
           |  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 688 acagtgtaaaatcaggaccttatctccgtgaagaaattcg 727



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 361 cagcaaataagaaatcagccaaaccgaagtggttcaaaaggtga 404
           ||||||| |||||| |||| ||||| ||||||||||||||||||
Sbjct: 841 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggtga 884
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>gb|AY105954.1| Zea mays PCO090799 mRNA sequence
          Length = 973

 Score =  188 bits (95), Expect = 2e-44
 Identities = 206/243 (84%)
 Strand = Plus / Plus

                                                                       
Query: 25  gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatctttaca 84
           |||| ||||| || |||||||||||| ||||||||||||| |||||||||||||| || |
Sbjct: 481 gtctagtggacctgctcatgaaagtacttgctagaccagatctgccattctatctctata 540

                                                                       
Query: 85  cagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggctttg 144
           |||| |||||||||||||||||| ||||||| |||||||||||||| |||  ||| ||||
Sbjct: 541 cagtacctccaaagaagcgaatactggacacatcacaggacttctatacatctggttttg 600

                                                                       
Query: 145 ttcctggagctaatgtcttcttttcttatgatctgccagaagggtcggagttaaatacgg 204
           ||||||||||||||||    ||||||||||||||||| ||||| | |  ||||||| | |
Sbjct: 601 ttcctggagctaatgttcatttttcttatgatctgcccgaaggtttgttgttaaatgcag 660

                                                                       
Query: 205 atggtgtaaaatccggaccatatctccgtgaagaaattcgaactttggatggtctgtcac 264
           ||| | ||||| | ||||| |  |||||||||| ||||| || |||||||||  ||||||
Sbjct: 661 atgatctaaaagcaggacccttcctccgtgaaggaattctaagtttggatggattgtcac 720

              
Query: 265 ttc 267
           |||
Sbjct: 721 ttc 723
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>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 84    acagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggcttt 143
             |||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| |||
Sbjct: 53684 acagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggtttt 53743

                                                         
Query: 144   gttcctggagctaatgtcttcttttcttatgatctgccagaagg 187
             |||||||| |||||||||| ||| |||||||||||||| |||||
Sbjct: 53744 gttcctggggctaatgtctacttctcttatgatctgccggaagg 53787



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 192   gagttaaatacggatggtgtaaaatccggaccatatctccgtgaagaaattcg 244
             ||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 53896 gagttaaatacagacagtgtaaaatcaggaccttatctccgtgaagaaattcg 53948



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 25    gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatct 79
             ||||| ||||| |||| | |||||||||  |||||||||||||||||||||||||
Sbjct: 52846 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatct 52900



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 361   cagcaaataagaaatcagccaaaccgaagtggttcaaaaggt 402
             ||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 54062 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggt 54103
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                          
Query: 84     acagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggcttt 143
              |||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| |||
Sbjct: 120497 acagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggtttt 120556

                                                          
Query: 144    gttcctggagctaatgtcttcttttcttatgatctgccagaagg 187
              |||||||| |||||||||| ||| |||||||||||||| |||||
Sbjct: 120557 gttcctggggctaatgtctacttctcttatgatctgccggaagg 120600



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                   
Query: 192    gagttaaatacggatggtgtaaaatccggaccatatctccgtgaagaaattcg 244
              ||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 120709 gagttaaatacagacagtgtaaaatcaggaccttatctccgtgaagaaattcg 120761



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 25     gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatct 79
              ||||| ||||| |||| | |||||||||  |||||||||||||||||||||||||
Sbjct: 119659 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatct 119713



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                        
Query: 361    cagcaaataagaaatcagccaaaccgaagtggttcaaaaggt 402
              ||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 120875 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggt 120916
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 84       acagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggcttt 143
                |||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| |||
Sbjct: 24231272 acagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggtttt 24231331

                                                            
Query: 144      gttcctggagctaatgtcttcttttcttatgatctgccagaagg 187
                |||||||| |||||||||| ||| |||||||||||||| |||||
Sbjct: 24231332 gttcctggggctaatgtctacttctcttatgatctgccggaagg 24231375



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 192      gagttaaatacggatggtgtaaaatccggaccatatctccgtgaagaaattcg 244
                ||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 24231484 gagttaaatacagacagtgtaaaatcaggaccttatctccgtgaagaaattcg 24231536



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 25       gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatct 79
                ||||| ||||| |||| | |||||||||  |||||||||||||||||||||||||
Sbjct: 24230434 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatct 24230488



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 361      cagcaaataagaaatcagccaaaccgaagtggttcaaaaggt 402
                ||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 24231650 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggt 24231691
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>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score =  111 bits (56), Expect = 3e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 84    acagttcctccaaagaagcgaataatggacacctcacaggacttctacacaattggcttt 143
             |||||||| ||||||||||| ||||  ||||| |||| ||| |||||||||||||| |||
Sbjct: 25988 acagttccaccaaagaagcggataaaagacacttcactggatttctacacaattggtttt 26047

                                                         
Query: 144   gttcctggagctaatgtcttcttttcttatgatctgccagaagg 187
             |||||||| |||||||||| ||| |||||||||||||| |||||
Sbjct: 26048 gttcctggggctaatgtctacttctcttatgatctgccggaagg 26091



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 192   gagttaaatacggatggtgtaaaatccggaccatatctccgtgaagaaattcg 244
             ||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||
Sbjct: 26200 gagttaaatacagacagtgtaaaatcaggaccttatctccgtgaagaaattcg 26252



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 25    gtctggtggatcttctcatgaaagtaattgctagaccagacctgccattctatct 79
             ||||| ||||| |||| | |||||||||  |||||||||||||||||||||||||
Sbjct: 25150 gtctgatggattttctgaagaaagtaatctctagaccagacctgccattctatct 25204



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 361   cagcaaataagaaatcagccaaaccgaagtggttcaaaaggt 402
             ||||||| |||||| |||| ||||| ||||||||||||||||
Sbjct: 26366 cagcaaacaagaaaccagctaaaccaaagtggttcaaaaggt 26407
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>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform
          mRNA, partial cds
          Length = 911

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  gcctcgtgccgaatcggcacgagggtc 27
          |||||||||||||||||||||||||||
Sbjct: 10 gcctcgtgccgaatcggcacgagggtc 36
to top
>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence
          Length = 780

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  gcctcgtgccgaatcggcacgaggg 25
          |||||||||||||||||||||||||
Sbjct: 8  gcctcgtgccgaatcggcacgaggg 32
to top
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20
          mRNA, complete cds
          Length = 536

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 2  cctcgtgccgaatcggcacgagggt 26
          |||||||||||||||||||||||||
Sbjct: 76 cctcgtgccgaatcggcacgagggt 52
to top
>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I
            receptor mRNA, complete cds
          Length = 1293

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 1    gcctcgtgccgaatcggcacgaggg 25
            |||||||||||||||||||||||||
Sbjct: 1088 gcctcgtgccgaatcggcacgaggg 1112
to top
>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence
          Length = 1331

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||||
Sbjct: 9  gcctcgtgccgaatcggcacgagg 32



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 33 gcctcgtgccgattcggcacgagg 10
to top
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence
          Length = 1486

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 1   gcctcgtgccgaatcggcacgagg 24
           ||||||||||||||||||||||||
Sbjct: 473 gcctcgtgccgaatcggcacgagg 496



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   gcctcgtgccgaatcggcacgagg 24
           |||||||||||| |||||||||||
Sbjct: 497 gcctcgtgccgattcggcacgagg 474
to top
>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds
          Length = 568

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 1   gcctcgtgccgaatcggcacgagg 24
           ||||||||||||||||||||||||
Sbjct: 83  gcctcgtgccgaatcggcacgagg 106
to top
>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone
          oxidoreductase 10 kDa subunit precursor mRNA, complete
          cds; nuclear gene for mitochondrial product
          Length = 868

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||||
Sbjct: 7  gcctcgtgccgaatcggcacgagg 30



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 31 gcctcgtgccgattcggcacgagg 8
to top
>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP
          synthase gamma chain, mitochondrial precursor
          Length = 1225

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||||
Sbjct: 9  gcctcgtgccgaatcggcacgagg 32
to top
>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA
          Length = 1224

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||||
Sbjct: 24 gcctcgtgccgaatcggcacgagg 1
to top
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393
          Length = 731

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 2  cctcgtgccgaatcggcacgaggg 25
          ||||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgaggg 24
to top
>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone
          IMAGE:3940750), complete cds
          Length = 847

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||||
Sbjct: 24 gcctcgtgccgaatcggcacgagg 1
to top
>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence
          Length = 1502

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 1    gcctcgtgccgaatcggcacgagg 24
            ||||||||||||||||||||||||
Sbjct: 1421 gcctcgtgccgaatcggcacgagg 1398
to top
>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds
          Length = 778

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1
to top
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence
          Length = 1546

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2    cctcgtgccgaatcggcacgagg 24
            |||||||||||||||||||||||
Sbjct: 1116 cctcgtgccgaatcggcacgagg 1138



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 2    cctcgtgccgaatcggcacgaggg 25
            ||||||||||| ||||||||||||
Sbjct: 1138 cctcgtgccgattcggcacgaggg 1115
to top
>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase
          (GPD1) mRNA, partial cds
          Length = 630

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 24 gcctcgtgccgattcggcacgagg 1
to top
>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA
          Length = 1541

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 24 gcctcgtgccgattcggcacgagg 1
to top
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence
          Length = 1276

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 23 cctcgtgccgaatcggcacgagg 1



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 2  cctcgtgccgaatcggcacgaggg 25
          ||||||||||| ||||||||||||
Sbjct: 1  cctcgtgccgattcggcacgaggg 24
to top
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence
          Length = 711

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 24 gcctcgtgccgattcggcacgagg 1
to top
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA
          Length = 1395

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23
to top
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds
          Length = 1337

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 3    ctcgtgccgaatcggcacgaggg 25
            |||||||||||||||||||||||
Sbjct: 1274 ctcgtgccgaatcggcacgaggg 1252
to top
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone
          MGC:10300 IMAGE:3941377), complete cds
          Length = 707

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 1  cctcgtgccgaatcggcacgagg 23



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 24 gcctcgtgccgattcggcacgagg 1
to top
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds
          Length = 1770

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 2  cctcgtgccgaatcggcacgagg 24
          |||||||||||||||||||||||
Sbjct: 24 cctcgtgccgaatcggcacgagg 2



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  gcctcgtgccgaatcggcacgagg 24
          |||||||||||| |||||||||||
Sbjct: 1  gcctcgtgccgattcggcacgagg 24
to top
>gb|AY572781.1| Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX1)
           mRNA, complete cds
          Length = 756

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 116 ctcacaggacttctacacaattggctttgttcctggagctaatgtcttcttttc 169
           |||||| ||||||||| ||  ||| |||||||||||||| | ||||| ||||||
Sbjct: 489 ctcacaagacttctactcagctgggtttgttcctggagccattgtctacttttc 542
to top
>ref|NM_113645.2| Arabidopsis thaliana PUX1 (PLANT UBX DOMAIN-CONTAINING PROTEIN 1)
           AT3G27310 (PUX1) mRNA, complete cds
          Length = 939

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 116 ctcacaggacttctacacaattggctttgttcctggagctaatgtcttcttttc 169
           |||||| ||||||||| ||  ||| |||||||||||||| | ||||| ||||||
Sbjct: 513 ctcacaagacttctactcagctgggtttgttcctggagccattgtctacttttc 566
to top
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA
          Length = 5154

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 2  cctcgtgccgaatcggcacgag 23
          ||||||||||||||||||||||
Sbjct: 22 cctcgtgccgaatcggcacgag 1
to top
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene)
          Length = 941

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 3  ctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgagg 22
to top
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for
          oestrogen receptor alpha (ERalpha gene)
          Length = 3812

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 3  ctcgtgccgaatcggcacgagg 24
          ||||||||||||||||||||||
Sbjct: 31 ctcgtgccgaatcggcacgagg 10
to top
>gb|BT024476.1| Arabidopsis thaliana At3g27310 mRNA, complete cds
          Length = 756

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 116 ctcacaggacttctacacaattggctttgttcctggagctaatgtcttcttttc 169
           |||||| ||||||||| ||  ||| |||||||||||||| | ||||| ||||||
Sbjct: 489 ctcacaagacttctactcagctgggtttgttcctggagccattgtctacttttc 542
to top
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA
          Length = 2338

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 2  cctcgtgccgaatcggcacgag 23
          ||||||||||||||||||||||
Sbjct: 22 cctcgtgccgaatcggcacgag 1
to top
>dbj|AK175284.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-72-C22
          Length = 934

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 116 ctcacaggacttctacacaattggctttgttcctggagctaatgtcttcttttc 169
           |||||| ||||||||| ||  ||| |||||||||||||| | ||||| ||||||
Sbjct: 501 ctcacaagacttctactcagctgggtttgttcctggagccattgtctacttttc 554
to top
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12
          Length = 63604

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 116   ctcacaggacttctacacaattggctttgttcctggagctaatgtcttcttttc 169
             |||||| ||||||||| ||  ||| |||||||||||||| | ||||| ||||||
Sbjct: 51830 ctcacaagacttctactcagctgggtttgttcctggagccattgtctacttttc 51777
to top
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@)
          mRNA, complete cds
          Length = 775

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 2  cctcgtgccgaatcggcacgag 23
          ||||||||||||||||||||||
Sbjct: 30 cctcgtgccgaatcggcacgag 9
to top
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2
          (MKK2) mRNA, complete cds
          Length = 1460

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 35 ctcgtgccgaatcggcacgag 15
to top
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene)
          Length = 2385

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA,
          complete cds
          Length = 774

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>gb|AC122449.4| Mus musculus BAC clone RP24-247O14 from chromosome 9, complete sequence
          Length = 155620

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 544   tccctgtgttacaccagggag 564
             |||||||||||||||||||||
Sbjct: 94052 tccctgtgttacaccagggag 94032
to top
>gb|AY223271.1| Schistosoma japonicum clone ZZD474 mRNA sequence
          Length = 1122

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                        
Query: 1   gcctcgtgccgaat-cggcacgagggtct 28
           |||||||||||||| ||||||||||||||
Sbjct: 332 gcctcgtgccgaattcggcacgagggtct 360
to top
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription
          factor (ceh-43 gene)
          Length = 1039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>dbj|AB224127.1| Aspergillus oryzae cDNA, contig sequence: AoEST0969
          Length = 729

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                       
Query: 2  cctcgtgccgaat-cggcacgagggtctg 29
          ||||||||||||| |||||||||||||||
Sbjct: 1  cctcgtgccgaattcggcacgagggtctg 29
to top
>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt,
          complete cds, clone: C1562
          Length = 2301

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 2  cctcgtgccgaatcggcacgagggt 26
          ||||||||||||| |||||||||||
Sbjct: 23 cctcgtgccgaattggcacgagggt 47
to top
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds
          Length = 2427

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 11 ctcgtgccgaatcggcacgag 31
to top
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds
          Length = 1601

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein
          F02G3.1 mRNA, complete cds
          Length = 3261

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 9  ctcgtgccgaatcggcacgag 29
to top
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds
          Length = 826

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA,
          complete cds
          Length = 903

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 28 ctcgtgccgaatcggcacgag 8
to top
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light
          chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6
to top
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light
          chain variable region mRNA, partial cds
          Length = 467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6
to top
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein,
          complete cds
          Length = 946

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 21 ctcgtgccgaatcggcacgag 1
to top
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA,
          complete cds
          Length = 503

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgag 21
to top
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete
          cds
          Length = 1907

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 15 ctcgtgccgaatcggcacgag 35
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>gb|AY109271.1| Zea mays PCO074636 mRNA sequence
          Length = 503

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 46 ctcgtgccgaatcggcacgag 26
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>gb|AY106084.1| Zea mays PCO072275 mRNA sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 28 ctcgtgccgaatcggcacgag 8
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>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds
          Length = 444

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 1  ctcgtgccgaatcggcacgag 21
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>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds
          Length = 777

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 4  ctcgtgccgaatcggcacgag 24
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>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete
          cds
          Length = 1427

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 10 ctcgtgccgaatcggcacgag 30
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>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete
          cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 27 ctcgtgccgaatcggcacgag 7
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>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds
          Length = 620

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 3  ctcgtgccgaatcggcacgag 23
          |||||||||||||||||||||
Sbjct: 26 ctcgtgccgaatcggcacgag 6
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>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   gcctcgtgccgaatcggcacgagg 24
           ||||||||||||||| ||||||||
Sbjct: 179 gcctcgtgccgaatcagcacgagg 202
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>gb|AY812045.1| Schistosoma japonicum SJCHGC04761 protein mRNA, partial cds
          Length = 1332

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tgatgtttcaaagacaaatt 309
           ||||||||||||||||||||
Sbjct: 470 tgatgtttcaaagacaaatt 489
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>gb|AC156164.2| Mus musculus BAC clone RP24-75M13 from chromosome 9, complete sequence
          Length = 183015

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    aatgtcttcttttcttatga 175
              ||||||||||||||||||||
Sbjct: 141701 aatgtcttcttttcttatga 141720
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>gb|BC041619.1| Homo sapiens cDNA clone IMAGE:5923662, partial cds
          Length = 3199

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 1    gcctcgtgccgaa-tcggcacgagggtc 27
            ||||||||||||| ||||||||||||||
Sbjct: 1422 gcctcgtgccgaattcggcacgagggtc 1395
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>emb|BX927368.13| Zebrafish DNA sequence from clone CH211-15J16 in linkage group 23,
              complete sequence
          Length = 176438

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    attcagctcatcagtctgaa 332
              ||||||||||||||||||||
Sbjct: 175927 attcagctcatcagtctgaa 175946
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>gb|BC005885.1| Homo sapiens cDNA clone IMAGE:3537164, **** WARNING: chimeric clone
            ****
          Length = 1972

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 1    gcctcgtgccgaat-cggcacgagggtc 27
            |||||||||||||| |||||||||||||
Sbjct: 1398 gcctcgtgccgaattcggcacgagggtc 1425
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>gb|BC003593.1| Homo sapiens mRNA similar to protein phosphatase 2, regulatory
            subunit B (B56), gamma isoform (cDNA clone IMAGE:2822439)
          Length = 5329

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 1    gcctcgtgccgaa-tcggcacgagggtc 27
            ||||||||||||| ||||||||||||||
Sbjct: 4112 gcctcgtgccgaattcggcacgagggtc 4085
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>emb|AL590668.5| Human DNA sequence from clone RP11-463L20 on chromosome 6 Contains the
             MUT gene for methylmalonyl Coenzyme A mutase snd the 5'
             end of a novel gene, complete sequence
          Length = 67410

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   agctaatgtcttcttttctt 171
             ||||||||||||||||||||
Sbjct: 48478 agctaatgtcttcttttctt 48497
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>emb|AL162590.15| Human DNA sequence from clone RP11-54K16 on chromosome 9p13.3-21.1
             Contains a cancer/testis antigen 1 (CTAG1) (LAGE2B)
             pseudogene, the DNAJA1 gene for DnaJ (Hsp40) homolog,
             subfamily A, member 1, the gene for homolog of C. elegans
             smu-1 (SMU-1) (FLJ10805), the 5' end of the  APTX gene for
             aprataxin and 3 CpG islands, complete sequence
          Length = 98271

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   ttcttttcttatgatctgcc 181
             ||||||||||||||||||||
Sbjct: 10713 ttcttttcttatgatctgcc 10694
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>gb|AC159548.5| Mus musculus 6 BAC RP23-77B7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207770

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   caaagacaaattctgattca 317
             ||||||||||||||||||||
Sbjct: 20916 caaagacaaattctgattca 20935
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>gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, complete sequence
          Length = 167416

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   aaagacaaattctgattcag 318
             ||||||||||||||||||||
Sbjct: 58180 aaagacaaattctgattcag 58199
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>gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, complete sequence
          Length = 170510

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ccaccagcagcaaataagaa 373
             ||||||||||||||||||||
Sbjct: 63344 ccaccagcagcaaataagaa 63363
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>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence
          Length = 164290

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   aaagacaaattctgattcag 318
             ||||||||||||||||||||
Sbjct: 81123 aaagacaaattctgattcag 81104
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>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence
          Length = 186012

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    aaagacaaattctgattcag 318
              ||||||||||||||||||||
Sbjct: 108963 aaagacaaattctgattcag 108982
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>gb|AC153992.7| Mus musculus 6 BAC RP24-116E17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 195972

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   caaagacaaattctgattca 317
             ||||||||||||||||||||
Sbjct: 90382 caaagacaaattctgattca 90401
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>gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4 map 3p, complete sequence
          Length = 161612

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    ttcaaagacaaattctgattcagc 319
              ||||||| ||||||||||||||||
Sbjct: 153169 ttcaaaggcaaattctgattcagc 153192
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>gb|AF427519.1| Salmo salar CD9 protein mRNA, complete cds
          Length = 2229

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                      
Query: 1  gcctcgtgccgaat-cggcacgagggtc 27
          |||||||||||||| |||||||||||||
Sbjct: 1  gcctcgtgccgaattcggcacgagggtc 28
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>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid
          desaturase (fad3 gene)
          Length = 2248

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 4  tcgtgccgaatcggcacgag 23
          ||||||||||||||||||||
Sbjct: 62 tcgtgccgaatcggcacgag 81
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>gb|AY111159.1| Zea mays CL14483_-2 mRNA sequence
          Length = 534

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 1   gcctcgtgccgaat-cggcacgagggtc 27
           |||||||||||||| |||||||||||||
Sbjct: 277 gcctcgtgccgaattcggcacgagggtc 304
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>gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome 17, complete sequence
          Length = 214723

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    gacctgattctgcaccacca 359
              ||||||||||||||||||||
Sbjct: 192534 gacctgattctgcaccacca 192515
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>emb|AL732515.15| Zebrafish DNA sequence from clone RP71-1K13 in linkage group 23,
             complete sequence
          Length = 154426

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   attcagctcatcagtctgaa 332
             ||||||||||||||||||||
Sbjct: 51406 attcagctcatcagtctgaa 51425
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>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence
          Length = 209168

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   ttcaaagacaaattctgattcagc 319
             ||||||| ||||||||||||||||
Sbjct: 89376 ttcaaaggcaaattctgattcagc 89399
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>gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3p, complete sequence
          Length = 153152

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 296    ttcaaagacaaattctgattcagc 319
              ||||||| ||||||||||||||||
Sbjct: 144703 ttcaaaggcaaattctgattcagc 144726


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,374,282
Number of Sequences: 3902068
Number of extensions: 5374282
Number of successful extensions: 97729
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 97551
Number of HSP's gapped (non-prelim): 178
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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