ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor 54 2e-07
2BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor 54 2e-07
3BLC_CITFR (Q46036) Outer membrane lipoprotein blc precursor 53 4e-07
4YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor 48 2e-05
5BLC_VIBCH (Q08790) Outer membrane lipoprotein blc precursor (Pro... 47 2e-05
6C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-de... 31 1.5
7LAZA_SCHAM (P49291) Lazarillo protein precursor 30 2.5
8Y1163_AQUAE (O67227) Hypothetical protein aq_1163 30 2.5
9YR75_ECOLI (P21314) Hypothetical 36.8 kDa protein (ORF5) (Retron... 30 3.3

>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 36/94 (38%), Positives = 49/94 (52%)
 Frame = -2

Query: 472 KGKRDYIEGTAYKADPAXDEAKLKVKXYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPR 293
           +G     EG AY    A   A LKV  + P +       G Y V+ +D +Y++ALV  P 
Sbjct: 83  RGMWQQSEGKAYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPD 134

Query: 292 RKSLWILCRKTHIEEEVYNQLLXKAKEEGYDVAK 191
           R  LWIL R   I +EV  ++L  A  EG+DV+K
Sbjct: 135 RDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168



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>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 36/94 (38%), Positives = 49/94 (52%)
 Frame = -2

Query: 472 KGKRDYIEGTAYKADPAXDEAKLKVKXYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPR 293
           +G     EG AY    A   A LKV  + P +       G Y V+ +D +Y++ALV  P 
Sbjct: 83  RGMWQQSEGKAYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPD 134

Query: 292 RKSLWILCRKTHIEEEVYNQLLXKAKEEGYDVAK 191
           R  LWIL R   I +EV  ++L  A  EG+DV+K
Sbjct: 135 RDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168



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>BLC_CITFR (Q46036) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = -2

Query: 451 EGTAY-KADPAXDEAKLKVKXYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLWI 275
           EG AY   DP+   A LKV  + P +       G Y V+ +D +Y++ALV  P R  LWI
Sbjct: 90  EGKAYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 140

Query: 274 LCRKTHIEEEVYNQLLXKAKEEGYDVAKL 188
           L R   I +E+  Q+L  A  EG++V KL
Sbjct: 141 LSRTPTISDEMKQQMLAIATREGFEVNKL 169



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>YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor|
          Length = 169

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 34/54 (62%)
 Frame = -2

Query: 349 YWVLYVDDDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLXKAKEEGYDVAKL 188
           Y V+++D++YQYA+V      +LWIL R  +I +  YNQL+     +GYDV  L
Sbjct: 114 YNVIFIDENYQYAIVSGGN-DTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166



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>BLC_VIBCH (Q08790) Outer membrane lipoprotein blc precursor (Protein vlp)|
          Length = 171

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
 Frame = -2

Query: 472 KGKRDYIEGTAYKADPAXDEAKLKVKXYVPPFLPIIPVVGDYWVLYVD-DDYQYALVGEP 296
           KG+    EG AY  + + D   LKV  + P +       G Y V  +D ++Y YA V  P
Sbjct: 78  KGEWKEAEGKAYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGP 129

Query: 295 RRKSLWILCRKTHIEEEVYNQLLXKAKEEGYDVAKL 188
             + LW+L R   +E  + ++ +  +KE G+D  +L
Sbjct: 130 NTEYLWLLSRTPTVERGILDKFIEMSKERGFDTNRL 165



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>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty|
           acid omega-hydroxylase)
          Length = 513

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 280 WILCRKTHIEEEVYNQLLXKAKEEGYDVAK 191
           W+L + +H+E E+  ++  K++  GYD  K
Sbjct: 327 WLLSKHSHVENEILKEITGKSETVGYDEVK 356



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>LAZA_SCHAM (P49291) Lazarillo protein precursor|
          Length = 214

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = -2

Query: 373 PIIPVVGDYWVLYVD-DDYQ--YALVGEP----RRKSLWILCRKTHIEEEVYNQLLXKAK 215
           P  P VG+YW+L  D D+Y   ++ V  P      +  WIL R  +       ++  + K
Sbjct: 113 PNSPSVGNYWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTLERVEDELK 172

Query: 214 EEGYDVAKLHKTPQS 170
               D+ K  KT QS
Sbjct: 173 NLQLDLNKYTKTEQS 187



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>Y1163_AQUAE (O67227) Hypothetical protein aq_1163|
          Length = 125

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -2

Query: 361 VVGDYWVLYVDDDYQYALVGE---PRRKSLWILCRKTHIEEEVYNQLLXKAKEEGYD 200
           V G+ W++YVD    +A + E   PR ++ W   R   I E  +      ++EE YD
Sbjct: 61  VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYD 117



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>YR75_ECOLI (P21314) Hypothetical 36.8 kDa protein (ORF5) (Retron EC67)|
          Length = 326

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +3

Query: 12  YTKIDXDKHTSWLLQY----RPTSYTDG*TYHLPKSDLNHQ 122
           YT+   D  T W +QY    +P  +T G  +HL + D+N +
Sbjct: 133 YTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLLEPDINQE 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,071,769
Number of Sequences: 219361
Number of extensions: 585911
Number of successful extensions: 1986
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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