ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YLIF_ECOLI (P75801) Hypothetical membrane protein yliF 30 5.0
2YLIF_ECO57 (Q8X6V3) Hypothetical membrane protein yliF 30 5.0
3MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma ... 29 8.5

>YLIF_ECOLI (P75801) Hypothetical membrane protein yliF|
          Length = 442

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 40  AALDAHLSALRCRCQPKRVRER--ISRDLVLGAHFCSVLHGGVDYFLLDVALLNTVLN 207
           AAL A +S   C    +RV  R  + ++ ++  HF  VL GG+ +   DV  L ++ N
Sbjct: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293



to top

>YLIF_ECO57 (Q8X6V3) Hypothetical membrane protein yliF|
          Length = 442

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 40  AALDAHLSALRCRCQPKRVRER--ISRDLVLGAHFCSVLHGGVDYFLLDVALLNTVLN 207
           AAL A +S   C    +RV  R  + ++ ++  HF  VL GG+ +   DV  L ++ N
Sbjct: 236 AALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYN 293



to top

>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)|
           (CDC42-binding protein kinase gamma) (Myotonic dystrophy
           kinase-related CDC42-binding kinase gamma) (Myotonic
           dystrophy protein kinase-like alpha) (MRCK gamma)
           (DMPK-like gamma
          Length = 1551

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 18  CSSLSYYCSTRCPPQCSQVPLP 83
           C +  Y+C T C PQ    P+P
Sbjct: 909 CDACGYFCHTTCAPQAPPCPVP 930


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,481,248
Number of Sequences: 219361
Number of extensions: 1247962
Number of successful extensions: 3074
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3069
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top