>emb|X15692.1|HVLP90 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV90)
          Length = 660

 Score =  327 bits (165), Expect = 1e-86
 Identities = 248/276 (89%)
 Strand = Plus / Plus

                                                                       
Query: 74  aatggcgactatgatggccatgagctccttcgtcggcgccgccgtcctgcctcgtggctc 133
           ||||||||| |||||| ||||||||||||||| ||| || |||||| |||| ||  ||||
Sbjct: 30  aatggcgaccatgatgtccatgagctccttcgccggtgcggccgtcgtgccgcgcagctc 89

                                                                       
Query: 134 agctggccgcttcggcgcccgttcagtgccggcgctgggccggcgcgctcttgtcgtcag 193
            ||  || ||||||||||||| ||  |||| ||||||||||| ||||| || ||||||||
Sbjct: 90  ggccagcagcttcggcgcccggtctctgccagcgctgggccgacgcgccctcgtcgtcag 149

                                                                       
Query: 194 ggcacagaccgagggcccgagtgcaccaccgccaaacaaacccaaggcgagcacctcgat 253
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggcacagaccgagggcccgagcgcaccaccgccaaacaaacccaaggcgagcacctcgat 209

                                                                       
Query: 254 ctgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcggntagccat 313
           |||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 210 ctgggacgagatggcgttcagcggccctgcgccggagcgcatcaacgggcggctagccat 269

                                               
Query: 314 ggtaggcttcgaaacggcacttgcggtggaggcagg 349
           ||| |||||||  ||||| |||||||||||||||||
Sbjct: 270 ggtgggcttcgtgacggcgcttgcggtggaggcagg 305

>dbj|AB019617.1| Triticum aestivum wcr (wheat cold-regulated) 12 mRNA for early
           light-inducible protein (ELIP), complete cds
          Length = 818

 Score =  248 bits (125), Expect = 1e-62
 Identities = 243/283 (85%), Gaps = 6/283 (2%)
 Strand = Plus / Plus

                                                                       
Query: 73  taatggcgactatgatggccatgagctcctt------cgtcggcgccgccgtcctgcctc 126
           |||||||||  ||||||||||||||||||||      || |||||||||||||||||| |
Sbjct: 113 taatggcgatcatgatggccatgagctcctttgccggcgccggcgccgccgtcctgccgc 172

                                                                       
Query: 127 gtggctcagctggccgcttcggcgcccgttcagtgccggcgctgggccggcgcgctcttg 186
           |  |||| ||| |||||||||||||||  ||  |||| ||||||||| | ||||| || |
Sbjct: 173 gctgctcggctagccgcttcggcgcccagtctctgccagcgctgggcagacgcgccctcg 232

                                                                       
Query: 187 tcgtcagggcacagaccgagggcccgagtgcaccaccgccaaacaaacccaaggcgagca 246
           |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 233 tcgtcagggcacagaccgggggcccgagcgcaccaccgccaaacaaacccaaggcgagca 292

                                                                       
Query: 247 cctcgatctgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcggn 306
           |||| |||||||||||| |||||||||||||||| |||||||||||||| || |||||  
Sbjct: 293 cctctatctgggacgcgctggcgttcagcggccctgcgccggagcgcattaatgggcgcc 352

                                                      
Query: 307 tagccatggtaggcttcgaaacggcacttgcggtggaggcagg 349
           | |||||||| || ||||  ||||| || || |||||||||||
Sbjct: 353 tggccatggtgggtttcgtgacggcgctcgccgtggaggcagg 395

>emb|X15691.1|HVLP60 Barley mRNA for chloroplast low molecular mass early
           light-inducible protein (ELIP) (clone HV60)
          Length = 764

 Score =  244 bits (123), Expect = 2e-61
 Identities = 173/190 (91%)
 Strand = Plus / Plus

                                                                       
Query: 160 tgccggcgctgggccggcgcgctcttgtcgtcagggcacagaccgagggcccgagtgcac 219
           |||| ||||||||||| ||  | || ||||||||||||||||||||||||||||  ||||
Sbjct: 197 tgccagcgctgggccgacgtaccctcgtcgtcagggcacagaccgagggcccgaacgcac 256

                                                                       
Query: 220 caccgccaaacaaacccaaggcgagcacctcgatctgggacgcgatggcgttcagcggcc 279
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 257 caccgccaaacaaacccaaggcgagcacctccatctgggacgcgatggcgttcagcggcc 316

                                                                       
Query: 280 cggcgccggagcgcatcaacgggcggntagccatggtaggcttcgaaacggcacttgcgg 339
           | |||||||||||||||||||||||| |||||||||| |||||||  ||||| || || |
Sbjct: 317 ctgcgccggagcgcatcaacgggcggctagccatggtgggcttcgtgacggcgctggctg 376

                     
Query: 340 tggaggcagg 349
           ||||||||||
Sbjct: 377 tggaggcagg 386



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 73  taatggcgactatgatggccatgagctccttcgtcggcgccgccgtcctgcctcgtggct 132
           |||||||||| |||||||||||||||||||||| ||| || |||||| |||| || ||||
Sbjct: 125 taatggcgaccatgatggccatgagctccttcgccggtgcggccgtcttgccgcgcggct 184

            
Query: 133 c 133
           |
Sbjct: 185 c 185

>emb|X15693.1|HVLP58 Barley mRNA for chloroplast high molecular mass early
           light-inducible protein (ELIP) (clone HV58)
          Length = 860

 Score =  109 bits (55), Expect = 6e-21
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                       
Query: 247 cctcgatctgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcggn 306
           ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 429 cctcggtctgggacgcgctcgcgttcagcggcccggcgccggagcgcatcaacggccggc 488

                             
Query: 307 tagccatggtaggcttcg 324
           | ||||||||||||||||
Sbjct: 489 tggccatggtaggcttcg 506



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 172 gccggcgcgctcttgtcgtcagggcacagaccgagg 207
           |||||||| | || ||||||||||| ||||||||||
Sbjct: 159 gccggcgcaccctcgtcgtcagggcccagaccgagg 194

>gb|AF365951.1|AF365951 Zea mays early light-inducible protein ELIP mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 852

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 253 tctgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcggntagcca 312
           ||||||||||| ||||||||||||| || ||||||||||| |||||||||||| | || |
Sbjct: 316 tctgggacgcgctggcgttcagcgggcccgcgccggagcggatcaacgggcggctggcga 375

                       
Query: 313 tggtaggcttcg 324
           |||| |||||||
Sbjct: 376 tggtgggcttcg 387

>ref|NM_188763.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 271 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 321

>ref|XM_476845.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 226 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 276

>ref|XM_476844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 265 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 315

>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 25483 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 25533

>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 58021 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 58071

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                  
Query: 255     tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
               ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 4178496 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 4178546



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                  
Query: 255     tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
               ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 4176055 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 4176105



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     cgatctgggacgcgatggcg 269
               ||||||||||||||||||||
Sbjct: 3291267 cgatctgggacgcgatggcg 3291286

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                  
Query: 255     tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
               ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 8061370 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 8061420

>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1361_E02
          Length = 100168

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 62118 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 62168



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 59677 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 59727

>dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E06, full
           insert sequence
          Length = 942

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 420 tgggacgtgctggcgttcagcgggccggcgccggagcggatcaacgggcgg 470

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 255     tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
               ||||||| | ||||||||||||| |||||||||||||  ||||||||||||
Sbjct: 9470816 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcgg 9470766

>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0006C08
          Length = 151987

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||||||||||  ||||||||||||
Sbjct: 84377 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacgggcgg 84327

>ref|XM_468708.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 669

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||||||| |||||  ||||||| ||||||||||||
Sbjct: 250 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcgg 300

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 255      tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
                ||||||| | ||||||||||||| |||||  ||||||| ||||||||||||
Sbjct: 17148521 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcgg 17148471

>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 255   tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
             ||||||| | ||||||||||||| |||||  ||||||| ||||||||||||
Sbjct: 39914 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcgg 39864

>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
              complete sequence
          Length = 142814

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 255    tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
              ||||||| | ||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 137716 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcgg 137666

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 255      tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
                ||||||| | ||||||||||||| |||||||||||||  |||||| |||||
Sbjct: 11129061 tgggacgtgctggcgttcagcgggccggcgccggagccgatcaacaggcgg 11129011

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 255      tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
                ||||||| | ||||||||||||| |||||  ||||||| ||||||||||||
Sbjct: 17142090 tgggacgtgctggcgttcagcgggccggcaacggagcggatcaacgggcgg 17142040

>gb|AF017356.1|AF017356 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 818

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||| ||| ||||||||||| || ||||||||||||
Sbjct: 330 tgggacgtgctggcgttcaacgggccggcgccggaacggatcaacgggcgg 380

>gb|AF017357.1|AF017357 Oryza sativa low molecular early light-inducible protein mRNA,
           complete cds
          Length = 883

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                              
Query: 255 tgggacgcgatggcgttcagcggcccggcgccggagcgcatcaacgggcgg 305
           ||||||| | ||||||||| ||| ||||||||||| || ||||||||||||
Sbjct: 395 tgggacgtgctggcgttca-cgggccggcgccggaacggatcaacgggcgg 444

>gb|AY546021.1| Fungal endophyte WMS28 internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 465

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 161 gccggcgctgggccggcgcgc 181
           |||||||||||||||||||||
Sbjct: 79  gccggcgctgggccggcgcgc 59

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccttcgtcggcgccgccgtcctgcc 124
               |||||||||||||||||| ||||||
Sbjct: 2592286 ccttcgtcggcgccgccgccctgcc 2592262

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 139     gccgcttcggcgcccgttcag 159
               |||||||||||||||||||||
Sbjct: 2442046 gccgcttcggcgcccgttcag 2442066

>ref|XM_476698.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 cgatctgggacgcgatggcg 269
           ||||||||||||||||||||
Sbjct: 780 cgatctgggacgcgatggcg 799

>ref|XM_506171.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.127
           mRNA
          Length = 1913

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 cgatctgggacgcgatggcg 269
           ||||||||||||||||||||
Sbjct: 792 cgatctgggacgcgatggcg 811

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     ttcgtcggcgccgccgtcct 121
               ||||||||||||||||||||
Sbjct: 1000498 ttcgtcggcgccgccgtcct 1000517

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ccggcgctgggccggcgcgc 181
              ||||||||||||||||||||
Sbjct: 527740 ccggcgctgggccggcgcgc 527721

>dbj|AK098844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B24, full
           insert sequence
          Length = 1902

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 cgatctgggacgcgatggcg 269
           ||||||||||||||||||||
Sbjct: 780 cgatctgggacgcgatggcg 799

>dbj|AK065047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I08, full
           insert sequence
          Length = 1915

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 cgatctgggacgcgatggcg 269
           ||||||||||||||||||||
Sbjct: 792 cgatctgggacgcgatggcg 811

>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cgatctgggacgcgatggcg 269
              ||||||||||||||||||||
Sbjct: 100960 cgatctgggacgcgatggcg 100979


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,685,330
Number of Sequences: 3902068
Number of extensions: 1685330
Number of successful extensions: 37100
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 36647
Number of HSP's gapped (non-prelim): 454
length of query: 352
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 330
effective length of database: 17,147,199,772
effective search space: 5658575924760
effective search space used: 5658575924760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)