ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4k22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
2dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
3dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
4dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
6gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 103 6e-19
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
8dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
9ref|NM_191091.1| Oryza sativa (japonica cultivar-group), predic... 70 8e-09
10ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter A... 50 0.007
11emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BA... 50 0.007
12emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Co... 50 0.007
13emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Co... 50 0.007
14emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Co... 50 0.007
15gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115)... 50 0.007
16gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.7
17gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.7
18emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 i... 42 1.7
19emb|BX832718.1|CNS0A0X1 Arabidopsis thaliana Full-length cDNA Co... 42 1.7
20dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.7
21gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 40 6.9
22gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence 40 6.9
23emb|AL731546.4| Human DNA sequence from clone RP11-293L1 on chro... 40 6.9
24emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 6.9
25gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosom... 40 6.9
26gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, comp... 40 6.9
27gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complet... 40 6.9
28dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.9 
>dbj|AK070194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041H12, full
            insert sequence
          Length = 1930

 Score =  161 bits (81), Expect = 3e-36
 Identities = 159/185 (85%)
 Strand = Plus / Plus

                                                                        
Query: 9    atgacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctct 68
            ||||||||||||||||||||||| | ||||||||||| || |||||||| || ||||| |
Sbjct: 1312 atgacaaaatgttcaagtttgtcttgctactgcagcattctatgcccacatctgtgctgt 1371

                                                                        
Query: 69   caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
            ||||||| ||||| ||||| || || || || |||||||| || || |||||||||||||
Sbjct: 1372 caggtgctgttgcaaacctgaggggctgtggaaaagaatctgctgctatcttgttctggg 1431

                                                                        
Query: 129  tgcacatttttgcagtgttctccatggcggggtggattattttctacttgacgttgctct 188
            ||||||| ||||| |||||||||||||| || ||||||||||| || ||||  || ||||
Sbjct: 1432 tgcacatctttgctgtgttctccatggcaggatggattattttgtatttgagcttactct 1491

                 
Query: 189  tctaa 193
            |||||
Sbjct: 1492 tctaa 1496
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>dbj|AK069848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034N13, full
            insert sequence
          Length = 1975

 Score =  161 bits (81), Expect = 3e-36
 Identities = 159/185 (85%)
 Strand = Plus / Plus

                                                                        
Query: 9    atgacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctct 68
            ||||||||||||||||||||||| | ||||||||||| || |||||||| || ||||| |
Sbjct: 1288 atgacaaaatgttcaagtttgtcttgctactgcagcattctatgcccacatctgtgctgt 1347

                                                                        
Query: 69   caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
            ||||||| ||||| ||||| || || || || |||||||| || || |||||||||||||
Sbjct: 1348 caggtgctgttgcaaacctgaggggctgtggaaaagaatctgctgctatcttgttctggg 1407

                                                                        
Query: 129  tgcacatttttgcagtgttctccatggcggggtggattattttctacttgacgttgctct 188
            ||||||| ||||| |||||||||||||| || ||||||||||| || ||||  || ||||
Sbjct: 1408 tgcacatctttgctgtgttctccatggcaggatggattattttgtatttgagcttactct 1467

                 
Query: 189  tctaa 193
            |||||
Sbjct: 1468 tctaa 1472
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>dbj|AK119626.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H11, full
            insert sequence
          Length = 1737

 Score =  147 bits (74), Expect = 4e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                        
Query: 11   gacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctctca 70
            ||||| ||||||||||| |||||  ||||||||||||| |||||||| || || || |||
Sbjct: 1294 gacaagatgttcaagttcgtcctgttactgcagcactctatgcccacatcggtactatca 1353

                                                                        
Query: 71   ggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctgggtg 130
            ||||| ||||| ||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 1354 ggtgctgttgcaaacctaagaggttgtggcaaggaatcagctgcaatcttgttctgggtg 1413

                                                  
Query: 131  cacatttttgcagtgttctccatggcggggtggattat 168
            ||||||||||| || ||||||||||| || ||||||||
Sbjct: 1414 cacatttttgctgtcttctccatggcaggatggattat 1451
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>dbj|AK106744.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B08, full
            insert sequence
          Length = 1705

 Score =  147 bits (74), Expect = 4e-32
 Identities = 137/158 (86%)
 Strand = Plus / Plus

                                                                        
Query: 11   gacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctctca 70
            ||||| ||||||||||| |||||  ||||||||||||| |||||||| || || || |||
Sbjct: 1259 gacaagatgttcaagttcgtcctgttactgcagcactctatgcccacatcggtactatca 1318

                                                                        
Query: 71   ggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctgggtg 130
            ||||| ||||| ||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 1319 ggtgctgttgcaaacctaagaggttgtggcaaggaatcagctgcaatcttgttctgggtg 1378

                                                  
Query: 131  cacatttttgcagtgttctccatggcggggtggattat 168
            ||||||||||| || ||||||||||| || ||||||||
Sbjct: 1379 cacatttttgctgtcttctccatggcaggatggattat 1416
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                            
Query: 69       caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
                ||||||| ||||| ||||||||||| || || || |||||||| || |||||||||||||
Sbjct: 23553039 caggtgctgttgcaaacctaagaggttgtggcaaggaatcagctgcaatcttgttctggg 23552980

                                                        
Query: 129      tgcacatttttgcagtgttctccatggcggggtggattat 168
                ||||||||||||| || ||||||||||| || ||||||||
Sbjct: 23552979 tgcacatttttgctgtcttctccatggcaggatggattat 23552940



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 11       gacaaaatgttcaagtttgtcctactactgcagcactcgatgcccac 57
                ||||| ||||||||||| |||||  ||||||||||||| ||||||||
Sbjct: 23553200 gacaagatgttcaagttcgtcctgttactgcagcactctatgcccac 23553154
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                         
Query: 69    caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
             ||||||| ||||| ||||||||||| || || || |||||||| || |||||||||||||
Sbjct: 90211 caggtgctgttgcaaacctaagaggttgtggcaaggaatcagctgcaatcttgttctggg 90152

                                                     
Query: 129   tgcacatttttgcagtgttctccatggcggggtggattat 168
             ||||||||||||| || ||||||||||| || ||||||||
Sbjct: 90151 tgcacatttttgctgtcttctccatggcaggatggattat 90112



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 11    gacaaaatgttcaagtttgtcctactactgcagcactcgatgcccac 57
             ||||| ||||||||||| |||||  ||||||||||||| ||||||||
Sbjct: 90372 gacaagatgttcaagttcgtcctgttactgcagcactctatgcccac 90326
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                            
Query: 69       caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
                ||||||| ||||| ||||| || || || || |||||||| || || |||||||||||||
Sbjct: 34831330 caggtgctgttgcaaacctgaggggctgtggaaaagaatctgctgctatcttgttctggg 34831389

                                                                            
Query: 129      tgcacatttttgcagtgttctccatggcggggtggattattttctacttgacgttgctct 188
                ||||||| ||||| |||||||||||||| || ||||||||||| || ||||  || ||||
Sbjct: 34831390 tgcacatctttgctgtgttctccatggcaggatggattattttgtatttgagcttactct 34831449

                     
Query: 189      tctaa 193
                |||||
Sbjct: 34831450 tctaa 34831454



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 9        atgacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctct 68
                ||||||||||||||||||||||| | ||||||||||| || |||||||| || ||||| |
Sbjct: 34831081 atgacaaaatgttcaagtttgtcttgctactgcagcattctatgcccacatctgtgctgt 34831140

                     
Query: 69       caggt 73
                |||||
Sbjct: 34831141 caggt 34831145
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>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0454H12
          Length = 161004

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                         
Query: 69    caggtgccgttgccaacctaagagggtgcgggaaagaatcagccgcgatcttgttctggg 128
             ||||||| ||||| ||||| || || || || |||||||| || || |||||||||||||
Sbjct: 90502 caggtgctgttgcaaacctgaggggctgtggaaaagaatctgctgctatcttgttctggg 90561

                                                                         
Query: 129   tgcacatttttgcagtgttctccatggcggggtggattattttctacttgacgttgctct 188
             ||||||| ||||| |||||||||||||| || ||||||||||| || ||||  || ||||
Sbjct: 90562 tgcacatctttgctgtgttctccatggcaggatggattattttgtatttgagcttactct 90621

                  
Query: 189   tctaa 193
             |||||
Sbjct: 90622 tctaa 90626



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 9     atgacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctct 68
             ||||||||||||||||||||||| | ||||||||||| || |||||||| || ||||| |
Sbjct: 90253 atgacaaaatgttcaagtttgtcttgctactgcagcattctatgcccacatctgtgctgt 90312

                  
Query: 69    caggt 73
             |||||
Sbjct: 90313 caggt 90317
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>ref|NM_191091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2475

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9    atgacaaaatgttcaagtttgtcctactactgcagcactcgatgcccacctcagtgctct 68
            ||||||||||||||||||||||| | ||||||||||| || |||||||| || ||||| |
Sbjct: 1112 atgacaaaatgttcaagtttgtcttgctactgcagcattctatgcccacatctgtgctgt 1171

               
Query: 69   cag 71
            |||
Sbjct: 1172 cag 1174
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>ref|NM_120277.3| Arabidopsis thaliana auxin:hydrogen symporter AT5G01990 mRNA,
            complete cds
          Length = 1749

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1455 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 1507
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>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project)
          Length = 87581

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 8538 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 8486
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>emb|BX829737.1|CNS0A1BL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB32ZB10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1483

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1203 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 1255
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>emb|BX829574.1|CNS0A1GI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB22ZB07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1509

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1225 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 1277
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>emb|BX832768.1|CNS0A11R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH9ZF09 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1471

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1177 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 1229
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>gb|BT002925.1| Arabidopsis thaliana clone RAFL15-04-F05 (R20115) At5g01990 mRNA,
            complete sequence
          Length = 1468

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||||||||| |||||
Sbjct: 1190 cagcacacaatgcctacatcagtgctctcaggagctgttgccaaccttagagg 1242
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>gb|AE009156.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 182
            of 256 of the complete sequence
          Length = 11936

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 107  tcagccgcgatcttgttctgggtgc 131
            ||||||||||||| |||||||||||
Sbjct: 8799 tcagccgcgatctggttctgggtgc 8823
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 107     tcagccgcgatcttgttctgggtgc 131
               ||||||||||||| |||||||||||
Sbjct: 2015750 tcagccgcgatctggttctgggtgc 2015774
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>emb|BX537292.5| Zebrafish DNA sequence from clone CH211-213E17 in linkage group 10,
            complete sequence
          Length = 189446

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   tcagtgctctcaggtgccgtt 79
            |||||||||||||||||||||
Sbjct: 6188 tcagtgctctcaggtgccgtt 6208
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>emb|BX832718.1|CNS0A0X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH91ZH10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1331

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                 
Query: 41   cagcactcgatgcccacctcagtgctctcaggtgccgttgccaacctaagagg 93
            |||||| | ||||| || |||||||||||||| || ||||| ||||| |||||
Sbjct: 1164 cagcacacaatgcctacatcagtgctctcaggagctgttgcaaaccttagagg 1216
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>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15
          Length = 83689

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 agtagataccatgagaaaaca 244
           |||||||||||||||||||||
Sbjct: 269 agtagataccatgagaaaaca 249
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    tgtgcctgcccatattatta 452
              ||||||||||||||||||||
Sbjct: 215745 tgtgcctgcccatattatta 215764
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>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence
          Length = 174712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   caaaatgttcaagtttgtcc 32
            ||||||||||||||||||||
Sbjct: 8166 caaaatgttcaagtttgtcc 8185
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>emb|AL731546.4| Human DNA sequence from clone RP11-293L1 on chromosome 10, complete
             sequence
          Length = 92998

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tagtgtcatgaagtgtacaa 277
             ||||||||||||||||||||
Sbjct: 52782 tagtgtcatgaagtgtacaa 52801
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    gagaaaacatggaagaagat 255
              ||||||||||||||||||||
Sbjct: 109859 gagaaaacatggaagaagat 109878
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>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete
             sequence
          Length = 205283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   ttcctcgtacccatctttgt 361
             ||||||||||||||||||||
Sbjct: 89477 ttcctcgtacccatctttgt 89458
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>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence
          Length = 161720

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   tgtgcctgcccatattatta 452
             ||||||||||||||||||||
Sbjct: 51621 tgtgcctgcccatattatta 51602
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>gb|AC117207.5| Mus musculus BAC clone RP23-278A7 from 8, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 433  tgtgcctgcccatattatta 452
            ||||||||||||||||||||
Sbjct: 8235 tgtgcctgcccatattatta 8254
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
             complete sequence
          Length = 127049

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   attttctacttgacgttgct 186
             ||||||||||||||||||||
Sbjct: 80107 attttctacttgacgttgct 80088


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,565,918
Number of Sequences: 3902068
Number of extensions: 4565918
Number of successful extensions: 86926
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86805
Number of HSP's gapped (non-prelim): 121
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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