ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| rbags9d15 | 650 | AV920086 | not_full | gb|AF475122.1| Triticum aestivum ribosomal protein mRNA, partial cds Length = 366 | 500 | not_full | RL11_MEDSA (P46287) 60S ribosomal protein L11 (L5) Length = 181 | 222 | -- | --- | - | -- | --- | - |
| rbags9d12 | 615 | AV920085 | not_full | gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 174 | -- | --- | - | -- | --- | - |
| rbags9d11 | 719 | AV920084 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 113 | not_full | CAS1_ARATH (P38605) Cycloartenol synthase (EC 5.4.99.8) (2,3-epoxysqualene--cycloartenol cyclase) Length = 759 | 19 | -- | --- | - | -- | --- | - |
| rbags9d10 | 667 | AV920083 | not_full | gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 | 500 | not_full | VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) Length = 605 | 12 | -- | --- | - | -- | --- | - |
| rbags9d09 | 653 | AV920082 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 148 | -- | --- | - | -- | --- | - |
| rbags9d07 | 382 | AV920081 | not_full | gb|AY123418.1| Triticum aestivum putative ribosomal protein S18 mRNA, complete cds Length = 868 | 500 | not_full | HES5_RAT (Q03062) Transcription factor HES-5 (Hairy and enhancer of split 5) Length = 166 | 9 | -- | --- | - | -- | --- | - |
| rbags9d05 | 733 | AV920080 | not_full | dbj|AK121233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093E21, full insert sequence Length = 935 | 252 | not_full | VATL_AVESA (P23957) Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) Length = 165 | 57 | -- | --- | - | -- | --- | - |
| rbags9d03 | 493 | AV920079 | not_full | dbj|AB115914.1| Triticum aestivum Wrab18 mRNA for ABA inducible protein, complete cds Length = 852 | 105 | not_full | LEA1_HORVU (P14928) ABA-inducible protein PHV A1 Length = 213 | 13 | -- | --- | - | -- | --- | - |
| rbags9d02 | 660 | AV920078 | not_full | gb|BT018957.1| Zea mays clone Contig188.F mRNA sequence Length = 1329 | 45 | not_full | AHSA1_MOUSE (Q8BK64) Activator of 90 kDa heat shock protein ATPase homolog 1 (AHA1) Length = 338 | 9 | -- | --- | - | -- | --- | - |
| rbags9d01 | 601 | AV920077 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 29 | full | LEF4_NPVAC (P41477) Late expression factor 4 Length = 464 | 6 | -- | --- | - | -- | --- | - |
| rbags9c24 | 656 | AV920076 | not_full | ref|NM_185178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 | 244 | not_full | Y4597_ARATH (P0C042) Hypothetical protein At4g15970 Length = 367 | 4 | -- | --- | - | -- | --- | - |
| rbags9c23 | 690 | AV920075 | not_full | ref|XM_483553.1| Oryza sativa (japonica cultivar-group), mRNA Length = 624 | 92 | not_full | MD2L2_MOUSE (Q9D752) Mitotic spindle assembly checkpoint protein MAD2B (MAD2-like 2) Length = 211 | 5 | -- | --- | - | -- | --- | - |
| rbags9c19 | 673 | AV920074 | not_full | emb|AM039897.1| Hordeum vulgare mRNA for S-adenosyl-L-homocysteine hydrolase (ahh1 gene) Length = 1472 | 226 | not_full | SAHH_WHEAT (P32112) Adenosylhomocysteinase (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 485 | 129 | -- | --- | - | -- | --- | - |
| rbags9c18 | 664 | AV920073 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 52 | not_full | CD68_HUMAN (P34810) Macrosialin precursor (GP110) (CD68 antigen) Length = 354 | 1 | -- | --- | - | -- | --- | - |
| rbags9c17 | 639 | AV920072 | not_full | ref|XM_478169.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1179 | 32 | not_full | FKBA_ECOLI (P45523) FKBP-type peptidyl-prolyl cis-trans isomerase fkpA precursor (EC 5.2.1.8) (PPIase) (Rotamase) Length = 270 | 162 | -- | --- | - | -- | --- | - |
| rbags9c16 | 726 | AV920071 | not_full | gb|AF443601.1|AF443601 Oryza sativa clathrin assembly protein AP17-like protein mRNA, complete cds Length = 842 | 66 | not_full | AP2S1_MAIZE (O50016) AP-2 complex subunit sigma-1 (Clathrin coat assembly protein AP17) (Clathrin coat-associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (Clathrin assembly protein 2 small chain) Length = 132 | 48 | -- | --- | - | -- | --- | - |
| rbags9c15 | 521 | AV920070 | not_full | gb|AF475123.1| Triticum aestivum acidic ribosomal protein P2a-2 mRNA, partial cds Length = 339 | 307 | not_full | RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2) Length = 111 | 50 | -- | --- | - | -- | --- | - |
| rbags9c13 | 710 | AV920069 | not_full | emb|AM156907.1| Zea mays mRNA for transcription factor MYB39 (myb39 gene) Length = 1078 | 500 | not_full | MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) Length = 257 | 64 | -- | --- | - | -- | --- | - |
| rbags9c12 | 731 | AV920068 | not_full | dbj|AK060853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E12, full insert sequence Length = 1245 | 56 | not_full | NU6M_EQUAS (P92486) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH dehydrogenase subunit 6) Length = 175 | 4 | -- | --- | - | -- | --- | - |
| rbags9c11 | 80 | AV920067 | not_full | dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 | 58 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9c10 | 734 | AV920066 | not_full | gb|AY137456.1| Hordeum vulgare subsp. vulgare ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast gene for chloroplast product Length = 1589 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| rbags9c08 | 714 | AV920065 | not_full | gb|AY062186.1| Oryza sativa chromatin-remodeling factor CHD3 (PKL) mRNA, complete cds Length = 4443 | 44 | not_full | PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-) (Protein GYMNOS) Length = 1384 | 19 | -- | --- | - | -- | --- | - |
| rbags9c07 | 98 | AV920064 | not_full | gb|AF475122.1| Triticum aestivum ribosomal protein mRNA, partial cds Length = 366 | 43 | not_full | RL111_ARATH (P42795) 60S ribosomal protein L11-1 (L16A) Length = 182 | 15 | -- | --- | - | -- | --- | - |
| rbags9c06 | 600 | AV920063 | not_full | gb|M31545.1|BLYGSA Barley glutamate 1-semialdehyde aminotransferase (GSA) mRNA, complete cds Length = 1620 | 80 | not_full | GSA_HORVU (P18492) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 469 | 147 | -- | --- | - | -- | --- | - |
| rbags9c05 | 740 | AV920062 | not_full | ref|NM_187471.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 | 500 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 59 | -- | --- | - | -- | --- | - |
| rbags9c03 | 642 | AV920061 | not_full | gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 | 49 | not_full | TCPB_HUMAN (P78371) T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta) Length = 534 | 257 | -- | --- | - | -- | --- | - |
| rbags9b24 | 292 | AV920060 | not_full | gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 | 24 | not_full | 2AAG_ARATH (Q38951) Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform (PP2A, subunit A, gamma isoform) (AtA gamma) Length = 587 | 4 | -- | --- | - | -- | --- | - |
| rbags9b23 | 716 | AV920059 | not_full | dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full insert sequence Length = 1475 | 78 | not_full | GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1 precursor (EC 3.1.4.46) Length = 766 | 11 | -- | --- | - | -- | --- | - |
| rbags9b20 | 712 | AV920058 | not_full | dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 | 106 | not_full | UBE2N_RAT (Q9EQX9) Ubiquitin-conjugating enzyme E2 N (EC 6.3.2.19) (Ubiquitin-protein ligase N) (Ubiquitin carrier protein N) (Bendless-like ubiquitin-conjugating enzyme) Length = 152 | 180 | -- | --- | - | -- | --- | - |
| rbags9b18 | 695 | AV920057 | not_full | ref|NM_197199.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.6), mRNA Length = 1073 | 72 | not_full | MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING finger protein 64) Length = 485 | 18 | -- | --- | - | -- | --- | - |
| rbags9b16 | 185 | AV920056 | not_full | ref|XM_475688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 891 | 69 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9b14 | 587 | AV834270 | not_full | dbj|AK068482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153L21, full insert sequence Length = 3108 | 21 | not_full | MATK_GOSSC (Q7HTB5) Maturase K (Intron maturase) Length = 504 | 6 | -- | --- | - | -- | --- | - |
| rbags9b12 | 604 | AV920055 | not_full | emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 | 500 | not_full | EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 138 | -- | --- | - | -- | --- | - |
| rbags9b11 | 706 | AV920054 | not_full | gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 | 42 | not_full | DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3) (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 | 11 | -- | --- | - | -- | --- | - |
| rbags9b09 | 629 | AV920053 | not_full | dbj|AK120035.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-C08, full insert sequence Length = 1004 | 500 | not_full | ARF_ORYSA (P51823) ADP-ribosylation factor Length = 180 | 139 | -- | --- | - | -- | --- | - |
| rbags9b08 | 610 | AV920052 | not_full | gb|AY105690.1| Zea mays PCO065072 mRNA sequence Length = 1632 | 63 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 203 | -- | --- | - | -- | --- | - |
| rbags9b06 | 680 | AV920051 | not_full | gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 | 382 | not_full | CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 | 13 | -- | --- | - | -- | --- | - |
| rbags9b03 | 676 | AV920050 | not_full | gb|BT009251.1| Triticum aestivum clone wlk4.pk0006.e8:fis, full insert mRNA sequence Length = 1553 | 140 | not_full | IMA1A_ORYSA (Q71VM4) Importin alpha-1a subunit Length = 526 | 39 | -- | --- | - | -- | --- | - |
| rbags9b02 | 602 | AV920049 | not_full | ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4423 | 52 | not_full | ADAM8_MOUSE (Q05910) ADAM 8 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 8) (Cell surface antigen MS2) (Macrophage cysteine-rich glycoprotein) (CD156 antigen) Length = 826 | 4 | -- | --- | - | -- | --- | - |
| rbags9b01 | 650 | AV920048 | not_full | dbj|AK121443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O18, full insert sequence Length = 841 | 95 | not_full | RL24_RICPR (Q9ZCR6) 50S ribosomal protein L24 Length = 113 | 142 | -- | --- | - | -- | --- | - |
| rbags9a24 | 653 | AV920047 | not_full | gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 | 294 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| rbags9a23 | 652 | AV920046 | not_full | gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds Length = 1199 | 94 | not_full | TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1) Length = 1360 | 10 | -- | --- | - | -- | --- | - |
| rbags9a22 | 585 | AV920045 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 42 | not_full | LRRK2_HUMAN (Q5S007) Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (Dardarin) Length = 2527 | 8 | -- | --- | - | -- | --- | - |
| rbags9a21 | 610 | AV920044 | not_full | dbj|AK060267.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-D04, full insert sequence Length = 742 | 470 | not_full | CYC_WHEAT (P00068) Cytochrome c Length = 112 | 178 | -- | --- | - | -- | --- | - |
| rbags9a20 | 470 | AV920043 | not_full | ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 | 98 | not_full | RL5A_ORYSA (P49625) 60S ribosomal protein L5-1 Length = 304 | 56 | -- | --- | - | -- | --- | - |
| rbags9a19 | 622 | AV920042 | not_full | ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2184 | 39 | not_full | MFPA_BRANA (O49809) Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Includes: Enoyl-CoA hydratase (EC 4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3); 3-hydroxyacyl-CoA dehydrogenase | 70 | -- | --- | - | -- | --- | - |
| rbags9a18 | 298 | AV920041 | not_full | gb|AY224466.1| Oryza sativa (japonica cultivar-group) isolate 23949 heat shock-related protein mRNA, partial cds Length = 1257 | 27 | not_full | HSP7S_PEA (Q02028) Stromal 70 kDa heat shock-related protein, chloroplast precursor Length = 706 | 150 | -- | --- | - | -- | --- | - |
| rbags9a17 | 711 | AV920040 | not_full | gb|BT012823.1| Lycopersicon esculentum clone 113874R, mRNA sequence Length = 1125 | 27 | not_full | SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 | 500 | -- | --- | - | -- | --- | - |
| rbags9a15 | 687 | AV920039 | not_full | ref|XM_476650.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3250 | 62 | not_full | NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting partner of anaplastic lymphoma kinase) (Zinc finger C3HC-type protein 1) Length = 502 | 8 | -- | --- | - | -- | --- | - |
| rbags9a14 | 130 | AV834269 | not_full | gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 | 53 | not_full | SLO_DROME (Q03720) Calcium-activated potassium channel slowpoke (Maxi K channel) (MaxiK) (BK channel) (dSlo) Length = 1200 | 1 | -- | --- | - | -- | --- | - |
