ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, c... 48 0.006
2gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 44 0.099
3gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complet... 42 0.39
4ref|XM_637317.1| Dictyostelium discoideum hypothetical protein (... 40 1.5
5ref|XM_916213.2| PREDICTED: Mus musculus RIKEN cDNA 2310047C04 g... 40 1.5
6gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome... 40 1.5
7gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complet... 40 1.5
8emb|AL133338.8| Human DNA sequence from clone RP3-467N11 on chro... 40 1.5
9emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on ch... 40 1.5
10emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chrom... 40 1.5
11gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map... 40 1.5
12gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complet... 40 1.5
13dbj|AK039172.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 1.5
14gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosom... 40 1.5
15ref|XM_221487.3| PREDICTED: Rattus norvegicus similar to Ubiquit... 40 1.5
16emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encepha... 40 1.5
17gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, comp... 40 1.5
18gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome ... 38 6.1
19gb|AC170149.2| Phakopsora pachyrhizi clone JGIAFNA-1029M13, comp... 38 6.1
20ref|XM_470927.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.1
21gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromo... 38 6.1
22gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, com... 38 6.1
23gb|AC134583.5| Mus musculus BAC clone RP24-94C12 from chromosome... 38 6.1
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 6.1
25gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 1... 38 6.1
26gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete... 38 6.1
27gb|AC104139.6| Mus musculus BAC clone RP24-378M10 from chromosom... 38 6.1
28gb|AC144403.2| Felis catus clone RP86-60G24, complete sequence 38 6.1
29emb|BX649597.2| Human DNA sequence from clone RP11-186G6 on chro... 38 6.1
30emb|BX248112.4| Human DNA sequence from clone CTD-2340F8 on chro... 38 6.1
31emb|AL953911.4| Human DNA sequence from clone RP11-242D12 on chr... 38 6.1
32emb|AL162415.16| Human DNA sequence from clone RP11-286O1 on chr... 38 6.1
33emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on ... 38 6.1
34gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genom... 38 6.1
35emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 i... 38 6.1
36emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in ... 38 6.1
37emb|AL591867.13| Human DNA sequence from clone RP11-133N6 on chr... 38 6.1
38gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, com... 38 6.1
39gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-3... 38 6.1
40gb|AF287142.1|AF287142 Mus musculus ATP-binding cassette transpo... 38 6.1
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.1
42gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromo... 38 6.1
43gb|AC097650.3| Homo sapiens BAC clone RP11-96K18 from 2, complet... 38 6.1
44gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, comple... 38 6.1
45gb|AC124017.2| Homo sapiens BAC clone RP11-317M11 from 4, comple... 38 6.1
46dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 38 6.1
47emb|X91390.1|LELIN6 L.esculentum mRNA for invertase (LIN6) 38 6.1
48gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, compl... 38 6.1
49emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, ... 38 6.1
50emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 i... 38 6.1
51emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chr... 38 6.1
52gb|AC140244.3| Mus musculus BAC clone RP24-285J23 from 14, compl... 38 6.1
53emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on ch... 38 6.1 
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence
          Length = 211799

 Score = 48.1 bits (24), Expect = 0.006
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 96     aaacacaagtccaaaaactgaaaa 119
              ||||||||||||||||||||||||
Sbjct: 152881 aaacacaagtccaaaaactgaaaa 152858
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 44.1 bits (22), Expect = 0.099
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 102   aagtccaaaaactgaaaacagt 123
             ||||||||||||||||||||||
Sbjct: 97290 aagtccaaaaactgaaaacagt 97311
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>gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complete sequence
          Length = 190110

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 106    ccaaaaactgaaaacagtgac 126
              |||||||||||||||||||||
Sbjct: 144108 ccaaaaactgaaaacagtgac 144088
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>ref|XM_637317.1| Dictyostelium discoideum hypothetical protein (DDB0205501), partial
            mRNA
          Length = 2226

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   aaacagaggacaacaaggaa 93
            ||||||||||||||||||||
Sbjct: 1772 aaacagaggacaacaaggaa 1791
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>ref|XM_916213.2| PREDICTED: Mus musculus RIKEN cDNA 2310047C04 gene, transcript
            variant 7 (2310047C04Rik), mRNA
          Length = 4459

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  aactgaaaacagtgacattt 130
            ||||||||||||||||||||
Sbjct: 2725 aactgaaaacagtgacattt 2744
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>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     cagaaacagaggacaacaaggaaa 94
              ||||||||||||| ||||||||||
Sbjct: 144277 cagaaacagaggagaacaaggaaa 144254
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>gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complete sequence
          Length = 194266

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    cagaaacagaggacaacaaggaaa 94
             ||||||||||||| ||||||||||
Sbjct: 11644 cagaaacagaggagaacaaggaaa 11621
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>emb|AL133338.8| Human DNA sequence from clone RP3-467N11 on chromosome 6q16.1-16.3
           Contains the 5' end of the RNAH gene for an RNA helicase
           and a CpG island, complete sequence
          Length = 120314

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 91  gaaataaacacaagtccaaa 110
           ||||||||||||||||||||
Sbjct: 156 gaaataaacacaagtccaaa 175
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>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the
             3' end of the Mgl2 gene for macrophage galactose
             N-acetyl-galactosamine specific lectin 2, the Mgl1 gene
             for macrophage galactose N-acetyl-galactosamine specific
             lectin 1, the gene for a novel RNA polymerase Rpb1
             C-terminal repeat domain containing protein, three novel
             genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B,
             the Alox12 gene for arachidonate 12-lipoxygenase and four
             CpG islands, complete sequence
          Length = 174390

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    aggacaacaaggaaataaac 99
             ||||||||||||||||||||
Sbjct: 64731 aggacaacaaggaaataaac 64750
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>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete
             sequence
          Length = 212982

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    aggacaacaaggaaataaac 99
             ||||||||||||||||||||
Sbjct: 44752 aggacaacaaggaaataaac 44771
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>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete
            sequence
          Length = 52784

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 90   ggaaataaacacaagtccaaaaac 113
            |||||||||||| |||||||||||
Sbjct: 9166 ggaaataaacactagtccaaaaac 9143
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>gb|AC074194.6| Homo sapiens BAC clone RP11-739P1 from 4, complete sequence
          Length = 177273

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   acaagtccaaaaactgaaaacagt 123
             |||||||||||| |||||||||||
Sbjct: 67807 acaagtccaaaatctgaaaacagt 67784
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>dbj|AK039172.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230104G20 product:similar to KIAA0675
            PROTEIN [Homo sapiens], full insert sequence
          Length = 2731

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  aactgaaaacagtgacattt 130
            ||||||||||||||||||||
Sbjct: 2685 aactgaaaacagtgacattt 2704
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>gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosome 16, complete sequence
          Length = 212505

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aactgaaaacagtgacattt 130
              ||||||||||||||||||||
Sbjct: 131438 aactgaaaacagtgacattt 131457
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>ref|XM_221487.3| PREDICTED: Rattus norvegicus similar to Ubiquitin ligase protein
            DZIP3 (DAZ-interacting protein 3 homolog) (LOC303963),
            mRNA
          Length = 3876

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  aactgaaaacagtgacattt 130
            ||||||||||||||||||||
Sbjct: 2576 aactgaaaacagtgacattt 2595
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>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 218329

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    tttccaagtctgtcgacccagaaa 76
             ||||||||||||| ||||||||||
Sbjct: 23611 tttccaagtctgtagacccagaaa 23588
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>gb|AC117665.6| Mus musculus chromosome 8, clone RP23-360I9, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 102   aagtccaaaaactgaaaacagtgacatt 129
             |||| ||||||||| |||||||||||||
Sbjct: 82842 aagtacaaaaactggaaacagtgacatt 82815
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>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence
          Length = 214638

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 92     aaataaacacaagtccaaaaact 114
              ||||||| |||||||||||||||
Sbjct: 177917 aaataaatacaagtccaaaaact 177895
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>gb|AC170149.2| Phakopsora pachyrhizi clone JGIAFNA-1029M13, complete sequence
          Length = 39091

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 99    cacaagtccaaaaactgaaaaca 121
             ||||||||||||| |||||||||
Sbjct: 12148 cacaagtccaaaagctgaaaaca 12170
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>ref|XM_470927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 876

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 4   aagatccttggccttgcct 22
           |||||||||||||||||||
Sbjct: 187 aagatccttggccttgcct 205
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>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete
             sequence
          Length = 188947

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   tccaaaaactgaaaacagt 123
             |||||||||||||||||||
Sbjct: 75960 tccaaaaactgaaaacagt 75978
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>gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, complete sequence
          Length = 134271

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   caaaaactgaaaacagtga 125
             |||||||||||||||||||
Sbjct: 58825 caaaaactgaaaacagtga 58843
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>gb|AC134583.5| Mus musculus BAC clone RP24-94C12 from chromosome 8, complete sequence
          Length = 184447

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 78    agaggacaacaaggaaataaaca 100
             |||||| ||||||||||||||||
Sbjct: 84795 agaggagaacaaggaaataaaca 84817
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 4        aagatccttggccttgcct 22
                |||||||||||||||||||
Sbjct: 16430482 aagatccttggccttgcct 16430464
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>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence
          Length = 216489

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 92    aaataaacacaagtccaaaaact 114
             ||||||| |||||||||||||||
Sbjct: 12517 aaataaatacaagtccaaaaact 12495
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>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence
          Length = 152927

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   tccaaaaactgaaaacagt 123
             |||||||||||||||||||
Sbjct: 17161 tccaaaaactgaaaacagt 17143
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>gb|AC104139.6| Mus musculus BAC clone RP24-378M10 from chromosome 17, complete
             sequence
          Length = 138171

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    cttgcctataatctttctt 34
             |||||||||||||||||||
Sbjct: 58752 cttgcctataatctttctt 58734
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>gb|AC144403.2| Felis catus clone RP86-60G24, complete sequence
          Length = 147664

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    ataaacacaagtccaaaaa 112
             |||||||||||||||||||
Sbjct: 98851 ataaacacaagtccaaaaa 98833
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>emb|BX649597.2| Human DNA sequence from clone RP11-186G6 on chromosome 9 Contains a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), a RAB28,
             member RAS oncogene family (RAB28) pseudogene, a
             pseudogene similar to part of ATP synthase, H+
             transporting, mitochondrial F1 complex, alpha subunit,
             isoform 1, cardiac muscle (ATP5A1), a novel pseudogene and
             a FK506 binding protein 4, 59kDa (FKBP4) pseudogene,
             complete sequence
          Length = 165995

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 86    acaaggaaataaacacaagtccaaaaa 112
             |||||||||||||||| ||||| ||||
Sbjct: 95555 acaaggaaataaacactagtcctaaaa 95529
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>emb|BX248112.4| Human DNA sequence from clone CTD-2340F8 on chromosome 9 Contains a
             FK506 binding protein 4, 59kDa (FKBP4) pseudogene, a
             pseudogene similar to part of NAD(P) dependent steroid
             dehydrogenase-like (HSPC105) and a pseudogene similar to
             part of ATP synthase, H+ transporting, mitochondrial F1
             complex, alpha subunit, isoform 1, cardiac muscle
             (ATP5A1), complete sequence
          Length = 75046

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 86    acaaggaaataaacacaagtccaaaaa 112
             |||||||||||||||| ||||| ||||
Sbjct: 27351 acaaggaaataaacactagtcctaaaa 27377
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>emb|AL953911.4| Human DNA sequence from clone RP11-242D12 on chromosome 9, complete
              sequence
          Length = 150770

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 86     acaaggaaataaacacaagtccaaaaa 112
              |||||||||||||||| ||||| ||||
Sbjct: 105173 acaaggaaataaacactagtcctaaaa 105199
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>emb|AL162415.16| Human DNA sequence from clone RP11-286O1 on chromosome 9 Contains a
              pseudogene similar to part of contactin associated
              protein-like family, a FK506 binding protein 4, 59kDa
              (FKBP4) pseudogene, a pseudogene similar to part of NAD(P)
              dependent steroid dehydrogenase-like (HSPC105) and
              pseudogene similar to part of ATP synthase, H+
              transporting, mitochondrial F1 complex, alpha subunit
              family, complete sequence
          Length = 169667

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 86     acaaggaaataaacacaagtccaaaaa 112
              |||||||||||||||| ||||| ||||
Sbjct: 108453 acaaggaaataaacactagtcctaaaa 108479
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>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3 Contains
              part of a novel gene (FLJ32928), two novel genes, and the
              5' end of the gene for androgen induced protein (AIG-1,
              CGI-103) (includes FLJ10485). Contains a CpG island,
              complete sequence
          Length = 137947

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     aataaacacaagtccaaaa 111
              |||||||||||||||||||
Sbjct: 118704 aataaacacaagtccaaaa 118722
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>gb|AC133932.4| Oryza sativa chromosome 3 BAC OSJNBb0074M06 genomic sequence, complete
             sequence
          Length = 146775

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aagatccttggccttgcct 22
             |||||||||||||||||||
Sbjct: 36728 aagatccttggccttgcct 36746
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>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
             complete sequence
          Length = 229078

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    aaataaacacaagtccaaa 110
             |||||||||||||||||||
Sbjct: 76233 aaataaacacaagtccaaa 76251
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>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8,
             complete sequence
          Length = 219913

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    aaataaacacaagtccaaa 110
             |||||||||||||||||||
Sbjct: 94571 aaataaacacaagtccaaa 94589
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>emb|AL591867.13| Human DNA sequence from clone RP11-133N6 on chromosome 9 Contains a
             pseudogene similar to part of ATP synthase, H+
             transporting, mitochondrial F1 complex, alpha subunit,
             isoform 1, cardiac muscle (ATP5A1), a novel pseudogene and
             a FK506 binding protein 4, 59kDa (FKBP4) pseudogene,
             complete sequence
          Length = 84506

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 86    acaaggaaataaacacaagtccaaaaa 112
             |||||||||||||||| ||||| ||||
Sbjct: 17411 acaaggaaataaacactagtcctaaaa 17385
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>gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, complete sequence
          Length = 146310

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   caaaaactgaaaacagtga 125
             |||||||||||||||||||
Sbjct: 70137 caaaaactgaaaacagtga 70119
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>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence
          Length = 185825

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 92     aaataaacacaagtccaaaaact 114
              ||||||| |||||||||||||||
Sbjct: 168812 aaataaatacaagtccaaaaact 168790
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>gb|AF287142.1|AF287142 Mus musculus ATP-binding cassette transporter sub-family A member 7
             (Abca7) gene, complete cds
          Length = 22881

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 92    aaataaacacaagtccaaaaact 114
             ||||||| |||||||||||||||
Sbjct: 19805 aaataaatacaagtccaaaaact 19783
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 4        aagatccttggccttgcct 22
                |||||||||||||||||||
Sbjct: 16424115 aagatccttggccttgcct 16424097
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>gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromosome unknown, complete
              sequence
          Length = 207792

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 84     caacaaggaaataaacaca 102
              |||||||||||||||||||
Sbjct: 173824 caacaaggaaataaacaca 173842
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>gb|AC097650.3| Homo sapiens BAC clone RP11-96K18 from 2, complete sequence
          Length = 18106

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 93   aataaacacaagtccaaaaactg 115
            |||||||||||||| ||||||||
Sbjct: 3507 aataaacacaagtcaaaaaactg 3485
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>gb|AC016711.9| Homo sapiens BAC clone RP11-249O24 from 2, complete sequence
          Length = 122880

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    aaggaaataaacacaagtc 106
             |||||||||||||||||||
Sbjct: 65106 aaggaaataaacacaagtc 65124
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>gb|AC124017.2| Homo sapiens BAC clone RP11-317M11 from 4, complete sequence
          Length = 138271

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    caacaaggaaataaacaca 102
             |||||||||||||||||||
Sbjct: 10767 caacaaggaaataaacaca 10785
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     aacaaggaaataaacacaa 103
              |||||||||||||||||||
Sbjct: 427370 aacaaggaaataaacacaa 427352
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>emb|X91390.1|LELIN6 L.esculentum mRNA for invertase (LIN6)
          Length = 725

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  aaacacaagtccaaaaact 114
           |||||||||||||||||||
Sbjct: 218 aaacacaagtccaaaaact 236
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>gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, complete sequence
          Length = 177340

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    gaggacaacaaggaaataa 97
             |||||||||||||||||||
Sbjct: 32605 gaggacaacaaggaaataa 32587
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>emb|AL935143.9| Zebrafish DNA sequence from clone CH211-192E21, complete sequence
          Length = 157691

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     aataaacacaagtccaaaa 111
              |||||||||||||||||||
Sbjct: 123653 aataaacacaagtccaaaa 123635
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>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9,
             complete sequence
          Length = 182412

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    aggacaacaaggaaataaa 98
             |||||||||||||||||||
Sbjct: 30057 aggacaacaaggaaataaa 30075
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>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete
             sequence
          Length = 180309

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    acagaggacaacaaggaaa 94
             |||||||||||||||||||
Sbjct: 24798 acagaggacaacaaggaaa 24816
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>gb|AC140244.3| Mus musculus BAC clone RP24-285J23 from 14, complete sequence
          Length = 171011

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 108   aaaaactgaaaacagtgac 126
             |||||||||||||||||||
Sbjct: 68592 aaaaactgaaaacagtgac 68574
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>emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on chromosome 15, complete
             sequence
          Length = 161985

 Score = 38.2 bits (19), Expect = 6.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     gaagatccttggccttgcc 21
             |||||||||||||||||||
Sbjct: 46707 gaagatccttggccttgcc 46689


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,616,382
Number of Sequences: 3902068
Number of extensions: 1616382
Number of successful extensions: 122607
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122377
Number of HSP's gapped (non-prelim): 230
length of query: 130
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 109
effective length of database: 17,151,101,840
effective search space: 1869470100560
effective search space used: 1869470100560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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