| Clone Name | rbags9c23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MD2L2_MOUSE (Q9D752) Mitotic spindle assembly checkpoint protein... | 39 | 0.011 | 2 | MD2L2_HUMAN (Q9UI95) Mitotic spindle assembly checkpoint protein... | 39 | 0.011 | 3 | POLN_WEEV (P13896) Nonstructural polyprotein (Polyprotein nsP123... | 31 | 4.1 | 4 | VU47_HHV6U (Q06093) Glycoprotein U47 precursor | 30 | 5.3 | 5 | ADRB1_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenoce... | 30 | 9.1 |
|---|
>MD2L2_MOUSE (Q9D752) Mitotic spindle assembly checkpoint protein MAD2B| (MAD2-like 2) Length = 211 Score = 39.3 bits (90), Expect = 0.011 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = -1 Query: 573 RAXLIKLSVAEPLTKPLPSDSSWEITAYFRSLPAGGAKDKEEDEARMWIHTDIK-AWMQT 397 RA ++K+SV + + P ++ + + R + + + WI D + M Sbjct: 124 RAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHD 183 Query: 396 PQITPIKSMGCDPLKMQLYLEQ 331 P++ P+K+M D LKMQLY+E+ Sbjct: 184 PRLIPLKTMTSDILKMQLYVEE 205
>MD2L2_HUMAN (Q9UI95) Mitotic spindle assembly checkpoint protein MAD2B| (MAD2-like 2) (hREV7) Length = 211 Score = 39.3 bits (90), Expect = 0.011 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = -1 Query: 573 RAXLIKLSVAEPLTKPLPSDSSWEITAYFRSLPAGGAKDKEEDEARMWIHTDIK-AWMQT 397 RA ++K+SV + + P ++ + + R + + + WI D + M Sbjct: 124 RAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKDFPWILADEQDVHMHD 183 Query: 396 PQITPIKSMGCDPLKMQLYLEQ 331 P++ P+K+M D LKMQLY+E+ Sbjct: 184 PRLIPLKTMTSDILKMQLYVEE 205
>POLN_WEEV (P13896) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC Length = 2466 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%) Frame = +1 Query: 352 LQRITSH*LDGGYLRRLHPCLDVRMDPHPSLVLLLV--LRTACREGSEV 492 + R+TSH LD G+ RRL L+ + P P++ + V LR +E EV Sbjct: 450 IPRLTSHGLDMGFRRRLKLLLEPTVKPAPAITMADVEHLRGLQQEAEEV 498
>VU47_HHV6U (Q06093) Glycoprotein U47 precursor| Length = 651 Score = 30.4 bits (67), Expect = 5.3 Identities = 21/59 (35%), Positives = 27/59 (45%) Frame = +3 Query: 279 NQYFVPTKQDPLPXMGRVVLGRAASSKDHIPLT*WGLSAASASMP*CPYGSTSEPRPPP 455 +QYF KQ P P GRA + D I T ++AS + P P + P PPP Sbjct: 243 DQYF---KQSPKPINVTTSFGRAIVNFDSILTTTPSSTSASLTSPHIPSTNIPTPAPPP 298
>ADRB1_MELGA (P07700) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) (Beta-T) Length = 483 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +3 Query: 423 YGSTSEPRPPPCPSHR--LQGGIGSRR 497 YGS +P+PPP P H+ L G S+R Sbjct: 249 YGSQEQPQPPPLPQHQPILGNGRASKR 275 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,393,469 Number of Sequences: 219361 Number of extensions: 2000126 Number of successful extensions: 4874 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4662 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4871 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)