ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9d03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB115914.1| Triticum aestivum Wrab18 mRNA for ABA inducible protein, complete cds Length = 852 Score = 507 bits (256), Expect = e-140 Identities = 316/336 (94%) Strand = Plus / Minus Query: 157 atgcgtctagtgatccccggtgatcttcccagtggtggtgtccttgctggtgttggtgtt 216 ||||||||||||||||| ||||||||| | |||||| |||||||| |||||||||||| Sbjct: 628 atgcgtctagtgatccctagtgatcttctcggtggtgctgtccttggcggtgttggtgtt 569 Query: 217 gtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcac 276 ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 568 gtcgccgcccatgcccagcgtgttcgccacggcgtccttggcgcccaccacggcgctcac 509 Query: 277 caccgtctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacggcgga 336 |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 508 caccgtctcgccggcctgctggagcacgctgccggtcttgtccttgccggccacggcgga 449 Query: 337 ctccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtctccga 396 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 448 ctccttggtgtactgcgccgcgtcggaggacctctcctgcgcgtactgggccgtctccga 389 Query: 397 cgccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtctt 456 |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| Sbjct: 388 cgccttctgcttggccgcatcggttgcctcggcggtcttctgcttggccgcctccgtctt 329 Query: 457 ctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||||||||||| || ||||||||||||||||| Sbjct: 328 ctcgccgaggaagctgccggtctggtccttgctctc 293 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/54 (88%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 77 ggaaacatacaaatatatgtggaaggcccgcgaacgaccaaacgactaaaggaa 130 |||||||||||||||| || | ||||||||||||||||||||| |||||||| Sbjct: 706 ggaaacatacaaatat--gtaaagggcccgcgaacgaccaaacgagtaaaggaa 655 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/49 (89%), Gaps = 2/49 (4%) Strand = Plus / Minus Query: 2 gtaactaattacagaaccggacacgagta--ccatcaaatcaaaggcaa 48 |||||| |||||||||||||||||||||| ||||||||| ||||||| Sbjct: 788 gtaactcattacagaaccggacacgagtagtacatcaaatcgaaggcaa 740
>gb|AY148491.1| Triticum aestivum LEA2 protein (LEA2) mRNA, complete cds Length = 664 Score = 466 bits (235), Expect = e-128 Identities = 308/331 (93%), Gaps = 1/331 (0%) Strand = Plus / Minus Query: 163 ctagtgatccccggtgatcttcc-cagtggtggtgtccttgctggtgttggtgttgtcac 221 ||||||||||| ||||||||| | | ||||||||||||||| ||||||||||||||| | Sbjct: 544 ctagtgatccctggtgatctttctcggtggtggtgtccttggcggtgttggtgttgtcgc 485 Query: 222 cgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcaccaccg 281 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 484 cgcccatgcccagcgtgttcgccaccgcgtccttggcgcccaccacggcgttcaccaccg 425 Query: 282 tctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactcct 341 |||||| |||||||||||| ||| || |||||||||||||||||||||||| || |||| Sbjct: 424 tctcgctggcctgctggagcacgccgctggtcttgtccttgccggcgacggctgattcct 365 Query: 342 tggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtctccgacgcct 401 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 364 tggtgtactgtgcggcgtcggaggaccgctcctgcgcgtactgcgccgtctccgacgtct 305 Query: 402 tctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttctcgc 461 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 304 tctgcttggccgcctctgttgcctcggcggccttctgcttggccgcctccgtcttctcgc 245 Query: 462 cgaggaagctccccgtctggtccttgctctc 492 |||||||||| || ||||||||||||||||| Sbjct: 244 cgaggaagctgcctgtctggtccttgctctc 214 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 99 aaggcccgcgaacgaccaaacgactaaaggaa 130 ||||||||||||||||||||||| |||||||| Sbjct: 585 aaggcccgcgaacgaccaaacgagtaaaggaa 554
>gb|AF255052.1|AF255052 Triticum aestivum cold-responsive LEA/RAB-related COR protein (Wrab19) mRNA, complete cds Length = 698 Score = 442 bits (223), Expect = e-121 Identities = 285/305 (93%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 ||||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||| Sbjct: 593 gtggtggtgtccttggtggtg---gcattgtcaccacccatgcccagcgtgttcgccacg 537 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 536 gcgtccttggcgcccaccacggcgcccaccaccgtctcgccggcctgctggagcacgctg 477 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcggaggac 367 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccggtcttgtccttgccggccacggcggactccttggtgtactgcgcggcgtcggaggac 417 Query: 368 ctctcctgcgcgtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcg 427 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 416 ctctcctgcgcgtactgcgccgcctccgacgccttctgcttggccgcctcggccgtctcg 357 Query: 428 gcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttg 487 |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 356 gcggccttctgcttggccgcctccgtcttctcgccgaggaagctgccggtctggtccttg 297 Query: 488 ctctc 492 ||||| Sbjct: 296 ctctc 292
>gb|AF139915.1|AF139915 Triticum aestivum ABA-inducible protein WRAB1 mRNA, complete cds Length = 698 Score = 442 bits (223), Expect = e-121 Identities = 285/305 (93%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 ||||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||| Sbjct: 593 gtggtggtgtccttggtggtg---gcattgtcaccacccatgcccagcgtgttcgccacg 537 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 536 gcgtccttggcgcccaccacggcgcccaccaccgtctcgccggcctgctggagcacgctg 477 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcggaggac 367 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccggtcttgtccttgccggccacggcggactccttggtgtactgcgcggcgtcggaggac 417 Query: 368 ctctcctgcgcgtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcg 427 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 416 ctctcctgcgcgtactgcgccgcctccgacgccttctgcttggccgcctcggccgtctcg 357 Query: 428 gcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttg 487 |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 356 gcggccttctgcttggccgcctccgtcttctcgccgaggaagctgccggtctggtccttg 297 Query: 488 ctctc 492 ||||| Sbjct: 296 ctctc 292
>dbj|AB181486.1| Bromus inermis BiLEA2 mRNA for LEA protein, complete cds Length = 866 Score = 357 bits (180), Expect = 2e-95 Identities = 256/280 (91%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 212 gtgttgtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcg 271 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || || Sbjct: 635 gtgttgtccccgcccatgcccagcgtgttagccacggcgtccttggcacccacgaccacg 576 Query: 272 ttcaccaccgtctcgccggcctgctggagggcgctgccggt-cttgtccttgccggcgac 330 || ||||||||||||||||||||| ||| ||| | |||| |||||||||||||||||| Sbjct: 575 tttttcaccgtctcgccggcctgctgcaggacgccggcggttcttgtccttgccggcgac 516 Query: 331 ggcggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggcggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgt 456 Query: 391 ctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 450 ||| |||||||||||||| |||||||| || | |||||||||||| ||||| |||||||| Sbjct: 455 ctcggacgccttctgctttgccgcctccgtggtctcggcggccttctgcttcgccgcctc 396 Query: 451 cgtcttctcgccgaggaagctccccgtctggtccttgctc 490 ||||||||||||||||| ||| || ||||||||||||||| Sbjct: 395 cgtcttctcgccgaggacgctgccggtctggtccttgctc 356 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 107 cgaacgaccaaacgactaaaggaaagcaaatt 138 ||||| ||||||| |||||||||||||||||| Sbjct: 772 cgaacaaccaaacaactaaaggaaagcaaatt 741
>gb|AY148490.1| Triticum aestivum LEA1 protein (LEA1) mRNA, complete cds Length = 843 Score = 283 bits (143), Expect = 3e-73 Identities = 161/167 (96%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 652 gtggtgttgtccttggtggtgttggtgttgtccccgcccatgcccagcgtgttggccacg 593 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct: 592 gcgtccttggcgcccaccacggcgttcaccaccgtctcccctgcctgctggaggacgctg 533 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 354 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 486 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 494 gtactgcgccgtctccgacgccttctgcttggccgcctcggtcgcctcggcggccttctg 435 Query: 439 cttggccgcctccgt 453 | ||||||||||||| Sbjct: 434 cctggccgcctccgt 420 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||| |||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 442 gccttctgcctggccgcctccgtggtctcggcggccttctgcttggccgcctccgtcttc 383 Query: 458 tcgccgaggaagctccccgtctggtccttgc 488 ||||||||| ||| | ||||||||||||| Sbjct: 382 tcgccgagggtgctggcggtctggtccttgc 352 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 70 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaaac 119 ||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 785 aaagagtggaaacatacaaatat--gtagaaggcccgcgaacgaccaaac 738 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||||||||| || | |||||||||||| ||||| | |||||||| || Sbjct: 223 gccttctgcttggccgcctccgtggtctcggcggccttctgcttcgtggcctccgtggtc 164 Query: 458 tcgccg 463 |||||| Sbjct: 163 tcgccg 158 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgt 453 ||||||||||||| ||||||| | |||| |||||| ||||||||||||||||| Sbjct: 256 gccttctgcttggtggcctcggccgtctcgctggccttctgcttggccgcctccgt 201 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 381 actgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||| ||| ||||| ||||||||||| Sbjct: 327 actgcgccgtctcgtacgtcttctccttggccgcct 292
>emb|X56882.1|TA3LEA Wheat mRNA for a group 3 late embryogenesis abundant protein (LEA) Length = 934 Score = 268 bits (135), Expect = 2e-68 Identities = 159/167 (95%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 |||||| |||||||| ||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 653 gtggtgttgtccttggtggtgatggtgttgtccccgcccatgcccagcgtgttggccacg 594 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct: 593 gcgtccttggcgcccaccacggcgttcaccaccgtctcccctgcctgctggaggacgctg 534 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 354 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 533 ccggtcttgtccttgccggtgacggcggactccttggtgtactgcgc 487 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 495 gtactgcgccgtctccgacgccttctgcttggccgcctcggtcgcctcggcggccttctg 436 Query: 439 cttggccgcctccgt 453 | ||||||||||||| Sbjct: 435 cctggccgcctccgt 421 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||| |||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 443 gccttctgcctggccgcctccgtggtctcggcggccttctgcttggccgcctccgtcttc 384 Query: 458 tcgccgaggaagctccccgtctggtccttgc 488 ||||||||| ||| | ||||||||||||| Sbjct: 383 tcgccgagggtgctggcggtctggtccttgc 353 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Minus Query: 70 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaa--acgactaaag 127 ||||||||||||||||||||||| || |||||||||||||||||||| || ||||||| Sbjct: 786 aaagagtggaaacatacaaatat--gtagaaggcccgcgaacgaccaaacactactaaag 729 Query: 128 gaaagcaaatt 138 |||||||||| Sbjct: 728 caaagcaaatt 718 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||||||||| || | |||||||||||| ||||| | |||||||| || Sbjct: 224 gccttctgcttggccgcctccgtggtctcggcggccttctgcttcgtggcctccgtggtc 165 Query: 458 tcgccg 463 |||||| Sbjct: 164 tcgccg 159 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgt 453 ||||||||||||| ||||||| | |||| |||||| ||||||||||||||||| Sbjct: 257 gccttctgcttggtggcctcggccgtctcgctggccttctgcttggccgcctccgt 202 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 381 actgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||| ||| ||||| ||||||||||| Sbjct: 328 actgcgccgtctcgtacgtcttctccttggccgcct 293
>emb|X13498.1|HVABAIP Barley pHVA1 mRNA for an ABA-inducible protein Length = 997 Score = 254 bits (128), Expect = 2e-64 Identities = 164/176 (93%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 ||||||| ||||||| ||| | |||||||||| || ||||||||||||||||| |||||| Sbjct: 715 gtggtggcgtccttggtggcgctggtgttgtcccctcccatgcccagcgtgtttgccacg 656 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 655 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggaggacgctg 596 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcgga 363 |||||||||||||||||||| || ||||||||||||||||||||||| | |||||| Sbjct: 595 ccggtcttgtccttgccggccaccgcggactccttggtgtactgcgccgtgtcgga 540 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 gtactgcgccgtgtcggacgccttctgcttggccgcctcggttgcctcggcggccttctg 498 Query: 439 cttggccgcctccgtcttctcg 460 |||||||||||||||| ||||| Sbjct: 497 cttggccgcctccgtcgtctcg 476 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 505 gccttctgcttggccgcctccgtcgtctcggcggccttctgcttggccgcctccgtcttc 446 Query: 458 tcgccgaggaagctccccgtctggtccttgc 488 ||||||||| ||| || ||||||||||||| Sbjct: 445 tcgccgagggcgctgccggtctggtccttgc 415 Score = 60.0 bits (30), Expect = 7e-06 Identities = 89/108 (82%), Gaps = 13/108 (12%) Strand = Plus / Minus Query: 70 aaagagtggaaacatacaaat-----atatgtggaaggcccgcgaacgaccaa--acgac 122 ||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||| Sbjct: 855 aaagagtggaaacatacaaatatgaaatatgtagaaggccctcgaacgaccaaacacgac 796 Query: 123 taaaggaaagcaaatttaaactgagcgcgaatgcatgcgtctagtgat 170 |||||||| | |||| | |||||||| |||||||||||||||| Sbjct: 795 taaaggaacggaaat------taagcgcgaacgcatgcgtctagtgat 754 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 298 gagggcgctgccggtcttgtccttgcc 324 ||||||||||||||||| ||||||||| Sbjct: 440 gagggcgctgccggtctggtccttgcc 414 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 422 gcctcggcggccttgtgcttggccgcctccgtcttctcgccg 463 |||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 328 gcctcggcggccttctgcttggcggcctcggccgtctcgccg 287
>emb|X78205.1|HVHVA1 H.vulgare (Himalaya) HVA1 gene Length = 1804 Score = 254 bits (128), Expect = 2e-64 Identities = 164/176 (93%) Strand = Plus / Minus Query: 188 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 247 ||||||| ||||||| ||| | |||||||||| || ||||||||||||||||| |||||| Sbjct: 1194 gtggtggcgtccttggtggcgctggtgttgtcccctcccatgcccagcgtgtttgccacg 1135 Query: 248 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1134 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggaggacgctg 1075 Query: 308 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcgga 363 |||||||||||||||||||| || ||||||||||||||||||||||| | |||||| Sbjct: 1074 ccggtcttgtccttgccggccaccgcggactccttggtgtactgcgccgtgtcgga 1019 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1036 gtactgcgccgtgtcggacgccttctgcttggccgcctcggttgcctcggcggccttctg 977 Query: 439 cttggccgcctccgtcttctcg 460 |||||||||||||||| ||||| Sbjct: 976 cttggccgcctccgtcgtctcg 955 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 984 gccttctgcttggccgcctccgtcgtctcggcggccttctgcttggccgcctccgtcttc 925 Query: 458 tcgccgaggaagctccccgtctggtccttgc 488 ||||||||| ||| || ||||||||||||| Sbjct: 924 tcgccgagggcgctgccggtctggtccttgc 894 Score = 60.0 bits (30), Expect = 7e-06 Identities = 89/108 (82%), Gaps = 13/108 (12%) Strand = Plus / Minus Query: 70 aaagagtggaaacatacaaat-----atatgtggaaggcccgcgaacgaccaa--acgac 122 ||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||| Sbjct: 1334 aaagagtggaaacatacaaatatgaaatatgtagaaggccctcgaacgaccaaacacgac 1275 Query: 123 taaaggaaagcaaatttaaactgagcgcgaatgcatgcgtctagtgat 170 |||||||| | |||| | |||||||| |||||||||||||||| Sbjct: 1274 taaaggaacggaaat------taagcgcgaacgcatgcgtctagtgat 1233 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 298 gagggcgctgccggtcttgtccttgcc 324 ||||||||||||||||| ||||||||| Sbjct: 919 gagggcgctgccggtctggtccttgcc 893 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 422 gcctcggcggccttgtgcttggccgcctccgtcttctcgccg 463 |||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 807 gcctcggcggccttctgcttggcggcctcggccgtctcgccg 766
>gb|AY148492.1| Triticum aestivum LEA3 protein (LEA3) mRNA, complete cds Length = 776 Score = 200 bits (101), Expect = 3e-48 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 228 tgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcaccaccgtctcgc 287 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 553 tgcccagcgtgttggccacggcgtccttggcgccatccacggcgttcaccaccgtctcgc 494 Query: 288 cggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgt 347 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 493 cggcctgctggaggacgctgccggtcttgtccttgccggcga---cggactccttggtgt 437 Query: 348 actgcgc 354 ||||||| Sbjct: 436 actgcgc 430 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 |||||||||||||||||| |||||||||||||| |||||||| | |||||||||||| || Sbjct: 438 gtactgcgccgtctccgaggccttctgcttggcagcctcggtcgtctcggcggccttctg 379 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||| |||| || |||||||||||| |||| Sbjct: 378 cttggccatctctgtcttctcgccgaggtagctgccggtctggtccttggtctc 325 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/70 (92%), Gaps = 4/70 (5%) Strand = Plus / Minus Query: 70 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaaac--gactaaag 127 ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 722 aaagagtggaaacatacaaatat--gtcgaaggcccgcgaacgaccaaacaggactaaag 665 Query: 128 gaaagcaaat 137 |||||||||| Sbjct: 664 gaaagcaaat 655
>dbj|AB181485.1| Bromus inermis BiLEA1 mRNA for LEA protein, complete cds Length = 855 Score = 157 bits (79), Expect = 4e-35 Identities = 175/207 (84%) Strand = Plus / Minus Query: 213 tgttgtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgt 272 ||||||| || ||||| ||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 572 tgttgtctccccccatccccagcgtgttggccaccgcgtctttggcgccaaccaccacgt 513 Query: 273 tcaccaccgtctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacgg 332 || |||| |||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 512 tcttcacctgctcgccggcctgagcgaggacgctgccggtcttgtccttgccggcgacgg 453 Query: 333 cggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtct 392 |||| ||||| ||||||||||| ||||||| || ||| ||||||| |||| || || || Sbjct: 452 cggagtccttcgtgtactgcgccgcgtcggcggccctgtcctgcgtgtaccccgtcgcct 393 Query: 393 ccgacgccttctgcttggccgcctcgg 419 || ||||||| |||||| ||||||| Sbjct: 392 gggaggccttctccttggcggcctcgg 366
>ref|XM_475821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 449 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 390 Query: 350 tgcgc 354 ||||| Sbjct: 389 tgcgc 385 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 393 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 334 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 333 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 280 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 225 ctgcgccgtctccgacgccctctccttcgccgcct 191
>dbj|AK119713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F03, full insert sequence Length = 968 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 550 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 491 Query: 350 tgcgc 354 ||||| Sbjct: 490 tgcgc 486 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 494 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 435 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 434 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 381 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 326 ctgcgccgtctccgacgccctctccttcgccgcct 292
>emb|Z68090.1|OSLEA3X1 O.sativa mRNA for group 3 LEA (type I) protein Length = 966 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 531 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 472 Query: 350 tgcgc 354 ||||| Sbjct: 471 tgcgc 467 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 475 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 416 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 415 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 362 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 307 ctgcgccgtctccgacgccctctccttcgccgcct 273
>gb|U57641.1|OSU57641 Oryza sativa LEA-like protein mRNA, embryo-specific clone Ose730, complete cds Length = 953 Score = 89.7 bits (45), Expect = 8e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 516 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 457 Query: 350 tgcgc 354 ||||| Sbjct: 456 tgcgc 452 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 460 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 401 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 400 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 347 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 292 ctgcgccgtctccgacgccctctccttcgccgcct 258
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 291 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 102455 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 102396 Query: 351 gcgc 354 |||| Sbjct: 102395 gcgc 102392 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 102400 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 102341 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 102340 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 102287 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 102232 ctgcgccgtctccgacgccctctccttcgccgcct 102198
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 291 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 3397 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 3338 Query: 351 gcgc 354 |||| Sbjct: 3337 gcgc 3334 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 3342 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 3283 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 3282 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 3229 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 3174 ctgcgccgtctccgacgccctctccttcgccgcct 3140
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 291 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 26721458 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 26721399 Query: 351 gcgc 354 |||| Sbjct: 26721398 gcgc 26721395 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 26721403 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 26721344 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 26721343 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 26721290 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 26721235 ctgcgccgtctccgacgccctctccttcgccgcct 26721201
>dbj|AK063984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D08, full insert sequence Length = 1277 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 291 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 643 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 584 Query: 351 gcgc 354 |||| Sbjct: 583 gcgc 580 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 379 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 438 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 588 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 529 Query: 439 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctc 492 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 528 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctc 475 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 382 ctgcgccgtctccgacgccttctgcttggccgcct 416 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 420 ctgcgccgtctccgacgccctctccttcgccgcct 386
>gb|AF046884.1|AF046884 Oryza sativa group 3 LEA protein (lea) gene, complete cds Length = 3734 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 291 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 2872 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 2813 Query: 351 gcgc 354 |||| Sbjct: 2812 gcgc 2809 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 424 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 483 |||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 2772 ctcggcggccttctgcttggcctgctcggtcttctcgccgaggaagccgccggtctggtc 2713 Query: 484 cttgctctc 492 ||||||||| Sbjct: 2712 cttgctctc 2704
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 296 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 495381 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 495435 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 29226786 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 29226837 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 424 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 483 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 495898 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 495957 Query: 484 cttgctctc 492 ||||||||| Sbjct: 495958 cttgctctc 495966
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 296 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 135582 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 135636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 424 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 483 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 136099 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 136158 Query: 484 cttgctctc 492 ||||||||| Sbjct: 136159 cttgctctc 136167
>dbj|AK120074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007J15, full insert sequence Length = 1459 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 296 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 350 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 874 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 820 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 424 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 483 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 357 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 298 Query: 484 cttgctctc 492 ||||||||| Sbjct: 297 cttgctctc 289
>ref|NM_191640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 503 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 444 Query: 350 tgcgcggcg 358 ||||||||| Sbjct: 443 tgcgcggcg 435
>dbj|AK073837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070H10, full insert sequence Length = 996 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 630 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 571 Query: 350 tgcgcggcg 358 ||||||||| Sbjct: 570 tgcgcggcg 562
>dbj|AK064074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H02, full insert sequence Length = 1006 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 632 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 573 Query: 350 tgcgcggcg 358 ||||||||| Sbjct: 572 tgcgcggcg 564
>dbj|D26536.1|RICWSI18 Oryza sativa (japonica cultivar-group) mRNA for WSI18 protein induced by water stress, complete cds Length = 978 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 290 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 349 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 612 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 553 Query: 350 tgcgcggcg 358 ||||||||| Sbjct: 552 tgcgcggcg 544
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 5649 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 5700
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 72573 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 72624
>dbj|AB001682.1| Oryza sativa DNA, cis-acting regulator of water stress specific gene Length = 2828 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 2385 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 2334
>emb|Z29512.1|ZMLEAMGL3 Z.mays mRNA for group 3 Lea protein MGL3 Length = 1094 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 289 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 348 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 349 ctgcgcggcgtcgg 362 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 458 tcgccg 463 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 458 tcgccg 463 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 458 tcgccg 463 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 458 tcgccg 463 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 422 gcctcggcggccttgtgcttggccgcctcc 451 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 458 tcgccgaggaagct 471 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357
>dbj|D26552.1|MZEG3LP Zea mays mRNA for group 3 Lea protein MGL3, complete cds Length = 1094 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 289 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 348 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 349 ctgcgcggcgtcgg 362 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 458 tcgccg 463 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 458 tcgccg 463 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 458 tcgccg 463 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 458 tcgccg 463 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 422 gcctcggcggccttgtgcttggccgcctcc 451 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 458 tcgccgaggaagct 471 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357
>gb|U05226.1|ZMU05226 Zea mays group 3 Lea protein MGL3 mRNA, complete cds Length = 1094 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 289 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 348 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 349 ctgcgcggcgtcgg 362 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 458 tcgccg 463 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 458 tcgccg 463 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 458 tcgccg 463 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 458 tcgccg 463 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 422 gcctcggcggccttgtgcttggccgcctcc 451 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.43 Identities = 61/74 (82%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 458 tcgccgaggaagct 471 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357
>emb|Y10779.1|SSY10779 S.stapfianus pSD.42 mRNA Length = 392 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 400 cttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 450 ||||||||||||| ||||||| | |||||||| ||| |||||||||||||| Sbjct: 215 cttctgcttggccacctcggtggtctcggcggtcttctgcttggccgcctc 165 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 400 cttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 450 ||||||||||||||||||||| | |||||||| ||| |||||||| ||||| Sbjct: 182 cttctgcttggccgcctcggtggtctcggcggtcttctgcttggcggcctc 132 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||||||| | |||||| | ||| ||||||||||||||||| || |||||| Sbjct: 118 gccttctgcttggttgactcggtggtctcaccggccttgtgcttggcctggtcggtcttc 59 Query: 458 tcgccgaggaagctccccgtct 479 | ||||||||||| ||||||| Sbjct: 58 tgaccgaggaagcttcccgtct 37 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 ccgtctccgacgccttctgcttgg 410 |||||||||| ||||||||||||| Sbjct: 42 ccgtctccgaggccttctgcttgg 19
>gb|AY104227.1| Zea mays PCO084365 mRNA sequence Length = 1024 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 289 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 348 ||||||||||| | ||| ||||| |||||||||||||| ||| |||| ||||||| ||| Sbjct: 583 ggcctgctggatgacgccgccggacttgtccttgccggagacagcggtgtccttggcgta 524 Query: 349 ctgcgcggcgtcgg 362 |||| | ||||||| Sbjct: 523 ctgcccagcgtcgg 510 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| | || ||||| ||||| |||||||| ||||||||| || Sbjct: 507 gccttctgcttggcggcctccatggcgtcggctgccttctgcttggcggcctccgtcgtc 448 Query: 458 tcgccg 463 |||||| Sbjct: 447 tcgccg 442 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 |||||||||||||| ||||| || | |||| ||||||| ||||||| ||||||||| || Sbjct: 474 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggtggcctccgtcgtc 415 Query: 458 tcgccg 463 |||||| Sbjct: 414 tcgccg 409 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 398 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 457 ||||||||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 441 gccttctgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 382 Query: 458 tcgccgaggaagct 471 | ||| ||| |||| Sbjct: 381 ttgcccaggtagct 368
>emb|AJ000100.1|HVAJ100 Hordeum vulgare mRNA for cold-regulated protein, partial Length = 594 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 446 gcctccgtcttctcgccgaggaagctccccgtctggtccttgc 488 |||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 151 gcctccgtcttctcgccgagaaagctggccgtctggtctttgc 109
>emb|X79466.1|HVES2A H.vulgare (Dbg 567) ES2A mRNA Length = 793 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 446 gcctccgtcttctcgccgaggaagctccccgtctggtccttgc 488 |||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 367 gcctccgtcttctcgccgagaaagctggccgtctggtctttgc 325
>gb|BT023964.1| Zea mays clone EL01N0409B10 mRNA sequence Length = 1065 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||| || ||| ||||||| |||| |||||||| Sbjct: 525 gccggtcttgtccttgccggccaccacggtgtccttggcgtacagcgcggcg 474
>gb|AY106518.1| Zea mays PCO092427 mRNA sequence Length = 583 Score = 48.1 bits (24), Expect = 0.027 Identities = 45/52 (86%) Strand = Plus / Minus Query: 307 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 358 ||||||||||||||||||||| || ||| ||||||| |||| |||||||| Sbjct: 121 gccggtcttgtccttgccggccaccacggtgtccttggcgtacagcgcggcg 70
>gb|U73217.1|TAU73217 Triticum aestivum cold acclimation protein WCOR615 (Wcor615) mRNA, complete cds Length = 776 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Minus Query: 425 tcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtcc 484 ||||||||| | | |||||| ||||| |||||||| |||| ||||| |||||||||| Sbjct: 345 tcggcggccatcttcttggcggcctcggtcttctcaccgaagaagccgaacgtctggtcc 286 Query: 485 ttgctctc 492 |||||||| Sbjct: 285 ttgctctc 278
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 194133 tggcgcccaccaaggcgttcaccacc 194158
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 caccaccgtctcgccggcctgc 295 |||||||||||||||||||||| Sbjct: 2966580 caccaccgtctcgccggcctgc 2966601 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 ctcggcggccttgtgcttggccgc 447 ||||||||||||||||| |||||| Sbjct: 1276844 ctcggcggccttgtgctcggccgc 1276821
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 85904 tggcgcccaccaaggcgttcaccacc 85879
>ref|NM_011323.1| Mus musculus sodium channel, voltage-gated, type VIII, alpha (Scn8a), mRNA Length = 5937 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 3964 tggcgcccaccaaggcgttcaccacc 3939
>dbj|AK083220.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630029C19 product:sodium channel, voltage-gated, type VIII, alpha polypeptide, full insert sequence Length = 4675 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 1615 tggcgcccaccaaggcgttcaccacc 1590
>gb|AF049617.1|AF049617 Mus musculus neuronal voltage-gated sodium channel alpha subunit (Scn8a) mRNA, complete cds Length = 5937 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 3964 tggcgcccaccaaggcgttcaccacc 3939
>gb|U26707.1|MMU26707 Mus musculus voltage-gated sodium channel alpha subunit SCN8A (Scn8a) mRNA, complete cds Length = 5352 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 255 tggcgcccaccacggcgttcaccacc 280 |||||||||||| ||||||||||||| Sbjct: 3238 tggcgcccaccaaggcgttcaccacc 3213
>ref|XM_464440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 180 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ttgccggcgacggcggactcc 340 ||||||||||||||||||||| Sbjct: 133 ttgccggcgacggcggactcc 153
>ref|XM_455818.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F16423g predicted mRNA Length = 1380 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 aaaagagtggaaacatacaaa 89 ||||||||||||||||||||| Sbjct: 1155 aaaagagtggaaacatacaaa 1175
>gb|AC146389.3| Pan troglodytes BAC clone RP43-143J12 from 7, complete sequence Length = 141930 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ggaaacatacaaatatatgtg 97 ||||||||||||||||||||| Sbjct: 7979 ggaaacatacaaatatatgtg 7999
>gb|AF031590.1| Streptomyces coelicolor thioredoxin (trxA) gene, partial cds; SpoOJ-like, Soj-like, GidB-like, Jag-like, inner membrane protein, and 9-10kDa protein-like genes, complete cds; RNase P protein (rnpA) gene, partial cds; and unknown gene Length = 6676 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tcggttgcctcggcggccttg 436 ||||||||||||||||||||| Sbjct: 2093 tcggttgcctcggcggccttg 2073
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 aaaagagtggaaacatacaaa 89 ||||||||||||||||||||| Sbjct: 1516942 aaaagagtggaaacatacaaa 1516922
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 tctgcttggccgcctcggttg 422 ||||||||||||||||||||| Sbjct: 204707 tctgcttggccgcctcggttg 204687
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 tcggttgcctcggcggccttg 436 ||||||||||||||||||||| Sbjct: 51194 tcggttgcctcggcggccttg 51214
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ttgccggcgacggcggactcc 340 ||||||||||||||||||||| Sbjct: 5232603 ttgccggcgacggcggactcc 5232623
>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence Length = 169199 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ggaaacatacaaatatatgtg 97 ||||||||||||||||||||| Sbjct: 91501 ggaaacatacaaatatatgtg 91481
>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence Length = 162931 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ggaaacatacaaatatatgtg 97 ||||||||||||||||||||| Sbjct: 29435 ggaaacatacaaatatatgtg 29415
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 cggcgttcaccaccgtctcgccggc 291 |||||| |||||||||||||||||| Sbjct: 3408378 cggcgtccaccaccgtctcgccggc 3408354
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 ttgccggcgacggcggactcc 340 ||||||||||||||||||||| Sbjct: 126056 ttgccggcgacggcggactcc 126076
>dbj|AB104882.1| Serratia marcescens sdeX, sdeY genes for multidrug efflux pump SdeX, multidrug efflux pump SdeY, complete cds Length = 4503 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 243 ccacggcgtccttggcgcccaccacggcg 271 |||||||| |||||||| ||||||||||| Sbjct: 541 ccacggcggccttggcggccaccacggcg 513
>gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene, partial cds; and TrxA (trxA), Orf205, ParB (parB), ParA (parA), GidB (gidB), Jag (jag), Orf431, Orf124, RNase P protein (rnpB), ribosomal protein rpmH (rpmH), DnaA (dnaA), and DnaN (dnaN) genes, complete cds Length = 12198 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tcggttgcctcggcggccttg 436 ||||||||||||||||||||| Sbjct: 2767 tcggttgcctcggcggccttg 2747
>gb|DQ124698.1| Aeromonas hydrophila strain AH-3 FliE (fliE), FliF (fliF), FliG (fliG), FliH (fliH), FliI (fliI), FliJ (fliJ), FliK (fliK), FliL (fliL), FliM (fliM), FliN (fliN), FliO (fliO), FliP (fliP), FliQ (fliQ), FliR (fliR), FlhB (flhB), FlhA (flhA), FlhF (flhF), FlhG (flhG), FliA (fliA), CheY (cheY), CheZ (cheZ), CheA (cheA), CheB (cheB), PomA (pomA), PomB (pomB), and CheW (cheW) genes, complete cds; and unknown genes Length = 29850 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 193 ggtgtccttgctggtgttggtgttg 217 |||||||||||||| |||||||||| Sbjct: 28815 ggtgtccttgctggcgttggtgttg 28839
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 283 ctcgccggcctgctggagggcgctgccg 310 ||||||||||||||||| ||||| |||| Sbjct: 222207 ctcgccggcctgctggatggcgccgccg 222180
>ref|XM_514687.1| PREDICTED: Pan troglodytes LOC458292 (LOC458292), mRNA Length = 2786 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1825 caccgcccatgcccagcgtg 1844
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 cttgtccttgccggcgacggcgga 336 |||||||||||||| ||||||||| Sbjct: 1787593 cttgtccttgccggtgacggcgga 1787616
>gb|AC159451.1| Trypanosoma brucei chromosome 8 clone RPCI93-5H5, complete sequence Length = 159463 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 cacggcgtccttggcgccca 263 |||||||||||||||||||| Sbjct: 117770 cacggcgtccttggcgccca 117789
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cacggcgtccttggcgccca 263 |||||||||||||||||||| Sbjct: 1502816 cacggcgtccttggcgccca 1502797
>gb|BC013365.2| Homo sapiens chromosome 20 open reading frame 67, mRNA (cDNA clone MGC:16205 IMAGE:3640928), complete cds Length = 2691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1523 caccgcccatgcccagcgtg 1542
>gb|BC010005.2| Homo sapiens chromosome 20 open reading frame 67, mRNA (cDNA clone MGC:15106 IMAGE:4131938), complete cds Length = 2691 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1524 caccgcccatgcccagcgtg 1543
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cgccgtctccgacgccttct 404 |||||||||||||||||||| Sbjct: 4858505 cgccgtctccgacgccttct 4858524
>ref|NM_022104.3| Homo sapiens chromosome 20 open reading frame 67 (C20orf67), mRNA Length = 2703 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1552 caccgcccatgcccagcgtg 1571
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 cggcggccttgtgcttggccgcct 449 ||||||||||| |||||||||||| Sbjct: 109460 cggcggccttgggcttggccgcct 109483
>ref|XM_756111.1| Ustilago maydis 521 hypothetical protein (UM05057.1) partial mRNA Length = 4410 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 gccgcctccgtcttctcgcc 462 |||||||||||||||||||| Sbjct: 3618 gccgcctccgtcttctcgcc 3599
>ref|XM_756804.1| Ustilago maydis 521 hypothetical protein (UM05750.1) partial mRNA Length = 1608 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccttgctggtgttggtgttg 217 |||||||||||||||||||| Sbjct: 1149 ccttgctggtgttggtgttg 1168
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgtccttgccggcgacggcg 334 |||||||||||||||||||| Sbjct: 25909 tgtccttgccggcgacggcg 25928
>ref|XM_819862.1| Trypanosoma brucei TREU927 clone RPCI93-5H5 DNA-directed RNA polymerase I largest subunit (Tb927.8.5090) partial mRNA Length = 5346 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cacggcgtccttggcgccca 263 |||||||||||||||||||| Sbjct: 84 cacggcgtccttggcgccca 65
>ref|XM_750611.1| Aspergillus fumigatus Af293 NADH-ubiquinone oxidoreductase 49 kDa subunit (Afu2g13710) partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ggtgttggtgttgtcaccgc 224 |||||||||||||||||||| Sbjct: 997 ggtgttggtgttgtcaccgc 1016
>gb|AC122866.4| Mus musculus BAC clone RP23-145J18 from 8, complete sequence Length = 200136 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gaaacatacaaatatatgtg 97 |||||||||||||||||||| Sbjct: 72776 gaaacatacaaatatatgtg 72795
>ref|XM_674992.1| Plasmodium berghei strain ANKA hypothetical protein (PB105992.00.0) partial mRNA Length = 504 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 ggtggtgtccttgctggtgttggtgttg 217 |||||||||| || |||||||||||||| Sbjct: 229 ggtggtgtccctggtggtgttggtgttg 256
>emb|AL929500.4| Human DNA sequence from clone CITF22-57B10 on chromosome 22, complete sequence Length = 8930 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gtgtccttgctggtgttggt 213 |||||||||||||||||||| Sbjct: 1511 gtgtccttgctggtgttggt 1492
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccagcgtgttggccacggcg 250 |||||||||||||||||||| Sbjct: 716948 ccagcgtgttggccacggcg 716929
>emb|X14399.1|TBRNPOL1 Trypanosoma brucei Trp11 gene for largest subunit of RNA polymerase I Length = 5780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cacggcgtccttggcgccca 263 |||||||||||||||||||| Sbjct: 414 cacggcgtccttggcgccca 395
>emb|AL137473.1|HSM802193 Homo sapiens mRNA; cDNA DKFZp434E1723 (from clone DKFZp434E1723) Length = 1363 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 92 caccgcccatgcccagcgtg 111
>dbj|AK056553.1| Homo sapiens cDNA FLJ31991 fis, clone NT2RP7009097 Length = 2795 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1530 caccgcccatgcccagcgtg 1549
>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete sequence Length = 179813 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aaggaaagcaaatttaaactgagc 148 |||||| ||||||||||||||||| Sbjct: 15469 aaggaaggcaaatttaaactgagc 15446
>gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, complete sequence Length = 125862 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cgactaaaggaaagcaaatt 138 |||||||||||||||||||| Sbjct: 123240 cgactaaaggaaagcaaatt 123221
>gb|AC022849.5| Homo sapiens, clone RP11-274M4, complete sequence Length = 154511 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 caacactgaaattcgggaaa 71 |||||||||||||||||||| Sbjct: 70108 caacactgaaattcgggaaa 70127
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 ggtcttgtccttgccggcgacggcggac 337 ||||||| |||| ||||||||||||||| Sbjct: 1361353 ggtcttggcctttccggcgacggcggac 1361326
>emb|AJ272265.1|HSA272265 Homo sapiens SPP2 gene for secreted phosphoprotein 24 precursor, exons 1-8 Length = 30000 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 125 aaggaaagcaaatttaaactgagc 148 |||||| ||||||||||||||||| Sbjct: 9066 aaggaaggcaaatttaaactgagc 9043
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctgcgcggcgtcggaggacc 368 |||||||||||||||||||| Sbjct: 17117329 ctgcgcggcgtcggaggacc 17117310 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccagtggtggtgtccttgctggtg 208 |||||||||||| ||||||||||| Sbjct: 15265829 ccagtggtggtgcccttgctggtg 15265806
>gb|AY826881.1| Heterocapsa triquetra clone HTPETA1 chloroplast cytochrome f mRNA, partial cds; nuclear gene for chloroplast product Length = 1256 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cgcgtactgcgccgtctccg 395 |||||||||||||||||||| Sbjct: 948 cgcgtactgcgccgtctccg 967
>gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chromosome unknown, complete sequence Length = 177940 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 aaggaaagcaaatttaaactgagc 148 |||||| ||||||||||||||||| Sbjct: 7616 aaggaaggcaaatttaaactgagc 7639
>gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, complete sequence Length = 108711 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 aaggaaagcaaatttaaactgagc 148 |||||| ||||||||||||||||| Sbjct: 70935 aaggaaggcaaatttaaactgagc 70958
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctgcgcggcgtcggaggacc 368 |||||||||||||||||||| Sbjct: 58086 ctgcgcggcgtcggaggacc 58067
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctgcgcggcgtcggaggacc 368 |||||||||||||||||||| Sbjct: 110988 ctgcgcggcgtcggaggacc 110969
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccagtggtggtgtccttgctggtg 208 |||||||||||| ||||||||||| Sbjct: 159805 ccagtggtggtgcccttgctggtg 159782
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 ccagtggtggtgtccttgctggtg 208 |||||||||||| ||||||||||| Sbjct: 45018 ccagtggtggtgcccttgctggtg 44995
>gb|AY552588.1| Trypanosoma cruzi clone C6:24B7 telomeric region Length = 34387 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tcggcggccttgtgcttggc 444 |||||||||||||||||||| Sbjct: 23338 tcggcggccttgtgcttggc 23319
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctgcgcggcgtcggaggacc 368 |||||||||||||||||||| Sbjct: 836 ctgcgcggcgtcggaggacc 855
>dbj|AB050014.1| Homo sapiens mRNA for posphorylated CTD interacting factor PCIF1, complete cds Length = 2674 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 1532 caccgcccatgcccagcgtg 1551
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 gttggccacggcgtccttggcgcc 261 ||||||||||||||| |||||||| Sbjct: 4734363 gttggccacggcgtctttggcgcc 4734340
>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete sequence Length = 150791 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 caccgcccatgcccagcgtg 238 |||||||||||||||||||| Sbjct: 32196 caccgcccatgcccagcgtg 32215
>gb|AC160104.2| Mus musculus BAC clone RP24-330A11 from chromosome 9, complete sequence Length = 223326 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aatcaaaggcaagctcaaca 56 |||||||||||||||||||| Sbjct: 153271 aatcaaaggcaagctcaaca 153290
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 taaaggaaagcaaatttaaa 142 |||||||||||||||||||| Sbjct: 155309 taaaggaaagcaaatttaaa 155290
>gb|M27164.1|TRBPOLI Trypanosoma brucei RNA polymerase I largest subunit (rpI196) gene, complete cds Length = 7077 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 cacggcgtccttggcgccca 263 |||||||||||||||||||| Sbjct: 419 cacggcgtccttggcgccca 400 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,894,537 Number of Sequences: 3902068 Number of extensions: 3894537 Number of successful extensions: 95499 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 93998 Number of HSP's gapped (non-prelim): 1467 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
