ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF443601.1|AF443601 Oryza sativa clathrin assembly protein AP... 533 e-148
2dbj|AK069232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 533 e-148
3dbj|AK104086.1| Oryza sativa (japonica cultivar-group) cDNA clon... 517 e-143
4gb|AY108944.1| Zea mays PCO070889 mRNA sequence 387 e-104
5gb|AF358763.1| Oryza sativa clone Osh64 clathrin coat assembly p... 371 2e-99
6emb|X96758.1|ZMCCAP Z.mays mRNA for clathrin coat assembly protein 315 1e-82
7gb|AY273900.1| Gossypium barbadense clathrin coat assembly prote... 194 3e-46
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 194 3e-46
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 194 3e-46
10emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F... 194 3e-46
11emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa... 194 3e-46
12ref|NM_103681.2| Arabidopsis thaliana unknown protein AT1G47830 ... 165 3e-37
13gb|BT003048.1| Arabidopsis thaliana At1g47830 gene, complete cds 165 3e-37
14gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana... 96 2e-16
15dbj|AB022210.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.010
16ref|NM_179165.1| Arabidopsis thaliana unknown protein AT4G35410 ... 44 0.64
17ref|XM_470047.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.64
18emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 44 0.64
19emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B... 44 0.64
20gb|AC007485.10| Homo sapiens chromosome 17, clone RP11-257O5, co... 44 0.64
21gb|AC023399.4|AC023399 Homo sapiens chromosome 17, clone RP11-78... 44 0.64
22gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II sectio... 44 0.64
23dbj|AK071871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.64
24gb|U92086.1|ATU92086 Arabidopsis thaliana clathrin assembly prot... 44 0.64
25gb|U92085.1|ATU92085 Arabidopsis thaliana clathrin assembly prot... 44 0.64
26ref|NM_127293.2| Arabidopsis thaliana AP19 AT2G17380 (AP19) mRNA... 42 2.5
27ref|NM_119707.2| Arabidopsis thaliana unknown protein AT4G35410 ... 42 2.5
28gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 2.5
29gb|BT025619.1| Arabidopsis thaliana At2g17380 mRNA, complete cds 42 2.5
30ref|XM_389749.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.5
31emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on ch... 42 2.5
32gb|AC134174.1| Drosophila pseudoobscura FOSMID DPSF1-548A7 (Chi... 42 2.5
33emb|Z54285.2|SPAC22F3 S.pombe chromosome I cosmid c22F3 42 2.5
34ref|NM_001018426.1| Schizosaccharomyces pombe 972h- hypothetical... 42 2.5
35gb|BT004964.1| Arabidopsis thaliana clone U51102 putative clathr... 42 2.5
36gb|AY086242.1| Arabidopsis thaliana clone 22906 mRNA, complete s... 42 2.5
37gb|AY085130.1| Arabidopsis thaliana clone 13246 mRNA, complete s... 42 2.5
38dbj|AK119004.1| Arabidopsis thaliana At4g35410 mRNA for putative... 42 2.5
39gb|U92084.1|ATU92084 Arabidopsis thaliana clathrin assembly prot... 42 2.5
40emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on ch... 42 2.5
41ref|XM_635826.1| Dictyostelium discoideum hypothetical protein (... 40 9.9
42gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome... 40 9.9
43ref|XM_705039.1| Candida albicans SC5314 L1-like non-LTR retrotr... 40 9.9
44emb|CT010448.4| Mouse DNA sequence from clone RP23-290P4 on chro... 40 9.9
45gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome... 40 9.9
46emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A1... 40 9.9
47emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4,... 40 9.9
48gb|AC123298.4| Rattus norvegicus BAC CH230-352N4 (Children's Ho... 40 9.9
49gb|AY122194.1| Drosophila melanogaster LD44686 full insert cDNA 40 9.9
50ref|NM_176728.1| Drosophila melanogaster CG33174-RA, transcript ... 40 9.9
51ref|NM_176727.1| Drosophila melanogaster CG33174-RD, transcript ... 40 9.9
52gb|AC099517.2| Homo sapiens chromosome 5 clone RP11-5H14, comple... 40 9.9
53gb|AF139376.1| Candida albicans non-LTR retrotransposon Zorro 1 ... 40 9.9
54gb|AC015524.7|AC015524 Homo sapiens chromosome 18, clone RP11-20... 40 9.9
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
57emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4,... 40 9.9
58gb|AC147908.2| Xenopus tropicalis clone CH216-7L4, complete sequ... 40 9.9
59gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosom... 40 9.9
60dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
61gb|AC147209.2| Xenopus tropicalis clone CH216-50L16, complete se... 40 9.9
62gb|AC006160.9|AC006160 Homo sapiens chromosome 4 clone C0481P14 ... 40 9.9
63emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122... 40 9.9
64emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014... 40 9.9
65gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 9.9
66gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complet... 40 9.9 
>gb|AF443601.1|AF443601 Oryza sativa clathrin assembly protein AP17-like protein mRNA,
           complete cds
          Length = 842

 Score =  533 bits (269), Expect = e-148
 Identities = 395/437 (90%)
 Strand = Plus / Minus

                                                                       
Query: 267 tttcttcttaatccagcttctcaagttcacccattctctctataatcgcctttttgcttg 326
           |||||||||| |||||||||||||| |||||||||| |||||| || ||| |||||||||
Sbjct: 496 tttcttcttattccagcttctcaagctcacccattcgctctattattgcccttttgcttg 437

                                                                       
Query: 327 tttcttgcagctctccagcgagaataaactcatccaatatcaagtaaaccttgtggaagt 386
           | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 436 tctcttgaagttctccagcgagaataaactcatccaatatcaaataaaccttgtggaaat 377

                                                                       
Query: 387 taaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatctccacaaata 446
           |||||||||| || ||||||||||| |||||||||||||| || |||||||| ||||| |
Sbjct: 376 taaatactaagtcgagttcacacacattgctgaagaaatgatctaatatctcgacaaaca 317

                                                                       
Query: 447 agtggatacattccaaatataccaactcattatccgtgatatctacacatattgagaaaa 506
           ||||||| |||||||| ||| |||||||||| || |||||||| ||||| ||||||||||
Sbjct: 316 agtggatgcattccaagtatgccaactcattgtcagtgatatccacacacattgagaaaa 257

                                                                       
Query: 507 atagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacgaagttagtga 566
           | ||||||||||||| |||||| |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 256 acagtcctgcatatcgcctgtatataactttatgcgtccggaactcaacgaagttggtga 197

                                                                       
Query: 567 acttgggatccctgttgacgaccagccgatgcacctcatactcaaccttgtgcttctccg 626
           |||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 196 acttgggatcccggttgaccaccagccgatgcacctcgtactcgaccttgtgcttctccg 137

                                                                       
Query: 627 agtcctcgagcgggacgtagtacttggcaagccgcgtcttcccctgccggttctgtaata 686
           |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 136 agtcctcgagcgggacgtagtacttggccagccgcgtcttcccctgccgattctgcagca 77

                            
Query: 687 gtatgaaacggatcatg 703
           | ||||| |||||||||
Sbjct: 76  ggatgaaccggatcatg 60
to top
>dbj|AK069232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010A09, full
           insert sequence
          Length = 907

 Score =  533 bits (269), Expect = e-148
 Identities = 395/437 (90%)
 Strand = Plus / Minus

                                                                       
Query: 267 tttcttcttaatccagcttctcaagttcacccattctctctataatcgcctttttgcttg 326
           |||||||||| |||||||||||||| |||||||||| |||||| || ||| |||||||||
Sbjct: 570 tttcttcttattccagcttctcaagctcacccattcgctctattattgcccttttgcttg 511

                                                                       
Query: 327 tttcttgcagctctccagcgagaataaactcatccaatatcaagtaaaccttgtggaagt 386
           | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 510 tctcttgaagttctccagcgagaataaactcatccaatatcaaataaaccttgtggaaat 451

                                                                       
Query: 387 taaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatctccacaaata 446
           |||||||||| || ||||||||||| |||||||||||||| || |||||||| ||||| |
Sbjct: 450 taaatactaagtcgagttcacacacattgctgaagaaatgatctaatatctcgacaaaca 391

                                                                       
Query: 447 agtggatacattccaaatataccaactcattatccgtgatatctacacatattgagaaaa 506
           ||||||| |||||||| ||| |||||||||| || |||||||| ||||| ||||||||||
Sbjct: 390 agtggatgcattccaagtatgccaactcattgtcagtgatatccacacacattgagaaaa 331

                                                                       
Query: 507 atagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacgaagttagtga 566
           | ||||||||||||| |||||| |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 330 acagtcctgcatatcgcctgtatataactttatgcgtccggaactcaacgaagttggtga 271

                                                                       
Query: 567 acttgggatccctgttgacgaccagccgatgcacctcatactcaaccttgtgcttctccg 626
           |||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 270 acttgggatcccggttgaccaccagccgatgcacctcgtactcgaccttgtgcttctccg 211

                                                                       
Query: 627 agtcctcgagcgggacgtagtacttggcaagccgcgtcttcccctgccggttctgtaata 686
           |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 210 agtcctcgagcgggacgtagtacttggccagccgcgtcttcccctgccgattctgcagca 151

                            
Query: 687 gtatgaaacggatcatg 703
           | ||||| |||||||||
Sbjct: 150 ggatgaaccggatcatg 134
to top
>dbj|AK104086.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F07, full
           insert sequence
          Length = 848

 Score =  517 bits (261), Expect = e-143
 Identities = 393/437 (89%)
 Strand = Plus / Minus

                                                                       
Query: 267 tttcttcttaatccagcttctcaagttcacccattctctctataatcgcctttttgcttg 326
           |||||||||| |||||||||||||| |||||||||| |||||| || ||| |||||||||
Sbjct: 569 tttcttcttattccagcttctcaagctcacccattcgctctattattgcccttttgcttg 510

                                                                       
Query: 327 tttcttgcagctctccagcgagaataaactcatccaatatcaagtaaaccttgtggaagt 386
           | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 509 tctcttgaagttctccagcgagaataaactcatccaatatcaaataaaccttgtggaaat 450

                                                                       
Query: 387 taaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatctccacaaata 446
           |||||||||| || ||||||||||| |||||||||||||| || |||||||| ||||| |
Sbjct: 449 taaatactaagtcgagttcacacacattgctgaagaaatgatctaatatctcgacaaaca 390

                                                                       
Query: 447 agtggatacattccaaatataccaactcattatccgtgatatctacacatattgagaaaa 506
           ||||||| |||||||| ||| |||||||||| || ||||||||  |||| ||||||||||
Sbjct: 389 agtggatgcattccaagtatgccaactcattgtcagtgatatccccacacattgagaaaa 330

                                                                       
Query: 507 atagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacgaagttagtga 566
           | ||||||||||||| |||||| |||||||| ||||| ||||||||| ||||||| ||||
Sbjct: 329 acagtcctgcatatcgcctgtatataactttatgcgtccggaactcagcgaagttggtga 270

                                                                       
Query: 567 acttgggatccctgttgacgaccagccgatgcacctcatactcaaccttgtgcttctccg 626
           |||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 269 acttgggatcccggttgaccaccagccgatgcacctcgtactcgaccttgtgcttctccg 210

                                                                       
Query: 627 agtcctcgagcgggacgtagtacttggcaagccgcgtcttcccctgccggttctgtaata 686
           |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |  |
Sbjct: 209 agtcctcgagcgggacgtagtacttggccagccgcgtcttcccctgccgattctgcagca 150

                            
Query: 687 gtatgaaacggatcatg 703
           | ||||| |||||||||
Sbjct: 149 ggatgaaccggatcatg 133
to top
>gb|AY108944.1| Zea mays PCO070889 mRNA sequence
          Length = 846

 Score =  387 bits (195), Expect = e-104
 Identities = 369/427 (86%)
 Strand = Plus / Minus

                                                                       
Query: 278 tccagcttctcaagttcacccattctctctataatcgcctttttgcttgtttcttgcagc 337
           ||||||||||| ||||||||||||| ||| || || ||||||||||||||||||||||||
Sbjct: 665 tccagcttctccagttcacccattcgctcaattattgcctttttgcttgtttcttgcagc 606

                                                                       
Query: 338 tctccagcgagaataaactcatccaatatcaagtaaaccttgtggaagttaaatactaaa 397
           || ||||| |||||||| ||||| | ||||| |||||||||||| || ||||| ||||||
Sbjct: 605 tccccagcaagaataaattcatctagtatcaggtaaaccttgtgaaaattaaacactaaa 546

                                                                       
Query: 398 tcaagttcacacacgttgctgaagaaatggtccaatatctccacaaataagtggatacat 457
           || || ||||| || ||||| |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 545 tcgagctcacaaacattgctaaagaaatggtccaatatctcgacaaacaagtgaatgcat 486

                                                                       
Query: 458 tccaaatataccaactcattatccgtgatatctacacatattgagaaaaatagtcctgca 517
           ||||| ||| |||| |||||||| || || || ||||||||||| ||||| ||||| |||
Sbjct: 485 tccaagtatgccaattcattatcagttatgtccacacatattgaaaaaaacagtccagca 426

                                                                       
Query: 518 tatctcctgtagataactttgtgcgtacggaactcaacgaagttagtgaacttgggatcc 577
           ||||||||||||||||||||||| || || ||||| |||||||| |||||||| || |||
Sbjct: 425 tatctcctgtagataactttgtgtgtgcgaaactcgacgaagttggtgaacttagggtcc 366

                                                                       
Query: 578 ctgttgacgaccagccgatgcacctcatactcaaccttgtgcttctccgagtcctcgagc 637
           |  ||||| || ||||| || ||||| || |||||||||||||| |||||||||||||||
Sbjct: 365 cgattgaccacgagccggtgtacctcgtattcaaccttgtgcttttccgagtcctcgagc 306

                                                                       
Query: 638 gggacgtagtacttggcaagccgcgtcttcccctgccggttctgtaatagtatgaaacgg 697
           |||||||| |||||||| || || |||||||||||||||||||| |  || ||||| |||
Sbjct: 305 gggacgtaatacttggccagtcgagtcttcccctgccggttctgcagcaggatgaagcgg 246

                  
Query: 698 atcatgc 704
           |||||||
Sbjct: 245 atcatgc 239
to top
>gb|AF358763.1| Oryza sativa clone Osh64 clathrin coat assembly protein mRNA,
           partial cds
          Length = 337

 Score =  371 bits (187), Expect = 2e-99
 Identities = 296/331 (89%), Gaps = 1/331 (0%)
 Strand = Plus / Minus

                                                                       
Query: 267 tttcttcttaatccagcttctcaagttcacccattctctctataatcgcctttttgcttg 326
           |||||||||| |||||||||||||| |||||||||| |||||| || ||| |||||||||
Sbjct: 331 tttcttcttattccagcttctcaagctcacccattcgctctattattgcccttttgcttg 272

                                                                       
Query: 327 tttcttgcagctctccagcgagaataaactcatccaatatcaagtaaaccttgtggaagt 386
           | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 271 tctcttgaagttctccagcgagaataaactcatccaatatcaaataaaccttgtggaaat 212

                                                                       
Query: 387 taaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatctccacaaata 446
           |||||||||| || ||||||||||| |||||||||||||| || |||||||| ||||| |
Sbjct: 211 taaatactaagtcgagttcacacacattgctgaagaaatgatctaatatctcgacaaaca 152

                                                                       
Query: 447 agtggatacattccaaatataccaactcattatccgtgatatctacacatattgagaaaa 506
           ||||||| |||||||| ||| |||||||||| || |||||||| ||||| ||||||||||
Sbjct: 151 agtggatgcattccaagtatgccaactcattgtcagtgatatccacacacattgagaaaa 92

                                                                       
Query: 507 atagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacgaagttagtga 566
           | ||||||||||||| |||| | |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 91  acagtcctgcatatcgcctggatataactttatgcgttcggaactcaacgaagttggtga 32

                                          
Query: 567 acttgggatccctgttgacgaccagccgatg 597
           |||||||||||| | |||| |||||||||||
Sbjct: 31  acttgggatcccgggtgac-accagccgatg 2
to top
>emb|X96758.1|ZMCCAP Z.mays mRNA for clathrin coat assembly protein
          Length = 887

 Score =  315 bits (159), Expect = 1e-82
 Identities = 367/434 (84%), Gaps = 8/434 (1%)
 Strand = Plus / Minus

                                                                       
Query: 278 tccagcttctcaag-ttcacccattctctctataatcgcctttttgcttgtttcttgcag 336
           ||||||||||| || ||||||||||| ||| || || ||||||| |||||||||||||||
Sbjct: 585 tccagcttctccaggttcacccattcgctcaattattgcctttt-gcttgtttcttgcag 527

                                                                       
Query: 337 ctctccagcgagaataaactcatccaatatcaagtaa------accttgtggaagttaaa 390
           ||| ||||| |||||||| ||||| | ||||| ||||      |||||||| || |||||
Sbjct: 526 ctccccagcaagaataaattcatctagtatcaggtaacggtaaaccttgtgaaaattaaa 467

                                                                       
Query: 391 tactaaatcaagttcacacacgttgctgaagaaatggtccaatatctccacaaataagtg 450
            |||||||| || ||||| || ||||| |||||||||||||||||||| ||||| |||||
Sbjct: 466 cactaaatcgagctcacaaacattgctaaagaaatggtccaatatctcgacaaacaagtg 407

                                                                       
Query: 451 gatacattccaaatataccaactcattatccgtgatatctacacatattgagaaaaatag 510
            || |||||||| ||| |||| |||||||| || || || ||||||||||| ||||| ||
Sbjct: 406 aatgcattccaagtatgccaattcattatcagttatgtccacacatattgaaaaaaacag 347

                                                                       
Query: 511 tcctgcatatctcctgtagataactttgtgcgtacggaactcaacgaagttagtgaactt 570
           ||| ||||||||||| |||||||||||||| || || ||||| |||||||| ||||||||
Sbjct: 346 tccagcatatctcctatagataactttgtgtgtgcgaaactcgacgaagttggtgaactt 287

                                                                       
Query: 571 gggatccctgttgacgaccagccgatgcacctcatactcaaccttgtgcttctccgagtc 630
            || ||||  ||||| || ||||| || ||||| || |||||||||||||| ||||||||
Sbjct: 286 agggtcccgattgaccacgagccggtgtacctcgtattcaaccttgtgcttttccgagtc 227

                                                                       
Query: 631 ctcgagcgggacgtagtacttggcaagccgcgtcttcccctgccggttctgtaatagtat 690
           ||||||||||||||| |||||||| || || |||||||||||||||||||| |  || ||
Sbjct: 226 ctcgagcgggacgtaatacttggccagtcgagtcttcccctgccggttctgcagcaggat 167

                         
Query: 691 gaaacggatcatgc 704
           ||| ||||||||||
Sbjct: 166 gaagcggatcatgc 153
to top
>gb|AY273900.1| Gossypium barbadense clathrin coat assembly protein mRNA, complete
           cds
          Length = 721

 Score =  194 bits (98), Expect = 3e-46
 Identities = 305/374 (81%)
 Strand = Plus / Minus

                                                                       
Query: 281 agcttctcaagttcacccattctctctataatcgcctttttgcttgtttcttgcagctct 340
           |||||||| || || |||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 475 agcttctccagctctcccattctctctattatagcctttttgcttgtttcttgaagctct 416

                                                                       
Query: 341 ccagcgagaataaactcatccaatatcaagtaaaccttgtggaagttaaatactaaatca 400
           ||||| ||||| || ||||| | |||||  || |||||||| || || || || || |||
Sbjct: 415 ccagcaagaatgaattcatcgagtatcagatagaccttgtgaaaattgaaaaccaagtca 356

                                                                       
Query: 401 agttcacacacgttgctgaagaaatggtccaatatctccacaaataagtggatacattcc 460
           || ||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 355 agctcacaaacattgctgaagaaatgatccaatatctccacaaataaatggatgcattcc 296

                                                                       
Query: 461 aaatataccaactcattatccgtgatatctacacatattgagaaaaatagtcctgcatat 520
           || ||| ||||||| ||||| || || || ||||| |  ||||| || | ||| ||||| 
Sbjct: 295 aagtatgccaactcgttatcggttatgtcaacacacaaggagaagaacaatccggcatac 236

                                                                       
Query: 521 ctcctgtagataactttgtgcgtacggaactcaacgaagttagtgaacttgggatccctg 580
           | |||||| || || || |||||||| ||||||||||| || || || || ||||| || 
Sbjct: 235 cgcctgtatattaccttatgcgtacgaaactcaacgaaattggtaaattttggatctcta 176

                                                                       
Query: 581 ttgacgaccagccgatgcacctcatactcaaccttgtgcttctccgagtcctcgagcggg 640
           || || ||||  ||||| ||||| || || |||||||||||||| || || ||||| || 
Sbjct: 175 ttaacaaccaatcgatgaacctcgtattcgaccttgtgcttctcggaatcttcgagggga 116

                         
Query: 641 acgtagtacttggc 654
           || ||||| |||||
Sbjct: 115 acatagtatttggc 102
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  194 bits (98), Expect = 3e-46
 Identities = 158/178 (88%)
 Strand = Plus / Minus

                                                                           
Query: 374     accttgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaat 433
               ||||||||||| ||||||||||| || ||||||||||| |||||||||||||| || |||
Sbjct: 5602997 accttgtggaaattaaatactaagtcgagttcacacacattgctgaagaaatgatctaat 5602938

                                                                           
Query: 434     atctccacaaataagtggatacattccaaatataccaactcattatccgtgatatctaca 493
               ||||| ||||| |||||||| |||||||| ||| |||||||||| || |||||||| |||
Sbjct: 5602937 atctcgacaaacaagtggatgcattccaagtatgccaactcattgtcagtgatatccaca 5602878

                                                                         
Query: 494     catattgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaact 551
               || ||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||
Sbjct: 5602877 cacattgagaaaaacagtcctgcatatcgcctgtatataactttatgcgtccggaact 5602820



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                           
Query: 598     cacctcatactcaaccttgtgcttctccgagtcctcgagcgggacgtagtacttggcaag 657
               |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5601520 cacctcgtactcgaccttgtgcttctccgagtcctcgagcgggacgtagtacttggccag 5601461

                                       
Query: 658     ccgcgtcttcccctgccggttctg 681
               |||||||||||||||||| |||||
Sbjct: 5601460 ccgcgtcttcccctgccgattctg 5601437



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                           
Query: 318     ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
               |||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 5603926 ttttgcttgtctcttgaagttctccagcgagaataaactcatccaatatcaaataaacct 5603867



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 550     ctcaacgaagttagtgaacttgggatccctgttgacgaccagccgatgcacct 602
               |||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 5601651 ctcaacgaagttggtgaacttgggatcccggttgaccaccagccgatgcacct 5601599



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                          
Query: 267     tttcttcttaatccagcttctcaagttcacccattctctctat 309
               |||||||||| |||||||||||||| |||||||||| ||||||
Sbjct: 5604807 tttcttcttattccagcttctcaagctcacccattcgctctat 5604765



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 452      atacattccaaatataccaa 471
                ||||||||||||||||||||
Sbjct: 26762326 atacattccaaatataccaa 26762345
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  194 bits (98), Expect = 3e-46
 Identities = 158/178 (88%)
 Strand = Plus / Minus

                                                                           
Query: 374     accttgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaat 433
               ||||||||||| ||||||||||| || ||||||||||| |||||||||||||| || |||
Sbjct: 5602986 accttgtggaaattaaatactaagtcgagttcacacacattgctgaagaaatgatctaat 5602927

                                                                           
Query: 434     atctccacaaataagtggatacattccaaatataccaactcattatccgtgatatctaca 493
               ||||| ||||| |||||||| |||||||| ||| |||||||||| || |||||||| |||
Sbjct: 5602926 atctcgacaaacaagtggatgcattccaagtatgccaactcattgtcagtgatatccaca 5602867

                                                                         
Query: 494     catattgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaact 551
               || ||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||
Sbjct: 5602866 cacattgagaaaaacagtcctgcatatcgcctgtatataactttatgcgtccggaact 5602809



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                           
Query: 598     cacctcatactcaaccttgtgcttctccgagtcctcgagcgggacgtagtacttggcaag 657
               |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5601509 cacctcgtactcgaccttgtgcttctccgagtcctcgagcgggacgtagtacttggccag 5601450

                                       
Query: 658     ccgcgtcttcccctgccggttctg 681
               |||||||||||||||||| |||||
Sbjct: 5601449 ccgcgtcttcccctgccgattctg 5601426



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                           
Query: 318     ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
               |||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 5603915 ttttgcttgtctcttgaagttctccagcgagaataaactcatccaatatcaaataaacct 5603856



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 550     ctcaacgaagttagtgaacttgggatccctgttgacgaccagccgatgcacct 602
               |||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 5601640 ctcaacgaagttggtgaacttgggatcccggttgaccaccagccgatgcacct 5601588



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                          
Query: 267     tttcttcttaatccagcttctcaagttcacccattctctctat 309
               |||||||||| |||||||||||||| |||||||||| ||||||
Sbjct: 5604796 tttcttcttattccagcttctcaagctcacccattcgctctat 5604754



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 452      atacattccaaatataccaa 471
                ||||||||||||||||||||
Sbjct: 26690496 atacattccaaatataccaa 26690515
to top
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 160556

 Score =  194 bits (98), Expect = 3e-46
 Identities = 158/178 (88%)
 Strand = Plus / Minus

                                                                          
Query: 374    accttgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaat 433
              ||||||||||| ||||||||||| || ||||||||||| |||||||||||||| || |||
Sbjct: 155802 accttgtggaaattaaatactaagtcgagttcacacacattgctgaagaaatgatctaat 155743

                                                                          
Query: 434    atctccacaaataagtggatacattccaaatataccaactcattatccgtgatatctaca 493
              ||||| ||||| |||||||| |||||||| ||| |||||||||| || |||||||| |||
Sbjct: 155742 atctcgacaaacaagtggatgcattccaagtatgccaactcattgtcagtgatatccaca 155683

                                                                        
Query: 494    catattgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaact 551
              || ||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||
Sbjct: 155682 cacattgagaaaaacagtcctgcatatcgcctgtatataactttatgcgtccggaact 155625



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Minus

                                                                          
Query: 598    cacctcatactcaaccttgtgcttctccgagtcctcgagcgggacgtagtacttggcaag 657
              |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 154325 cacctcgtactcgaccttgtgcttctccgagtcctcgagcgggacgtagtacttggccag 154266

                                      
Query: 658    ccgcgtcttcccctgccggttctg 681
              |||||||||||||||||| |||||
Sbjct: 154265 ccgcgtcttcccctgccgattctg 154242



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 318    ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
              |||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 156731 ttttgcttgtctcttgaagttctccagcgagaataaactcatccaatatcaaataaacct 156672



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                   
Query: 550    ctcaacgaagttagtgaacttgggatccctgttgacgaccagccgatgcacct 602
              |||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 154456 ctcaacgaagttggtgaacttgggatcccggttgaccaccagccgatgcacct 154404



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                         
Query: 267    tttcttcttaatccagcttctcaagttcacccattctctctat 309
              |||||||||| |||||||||||||| |||||||||| ||||||
Sbjct: 157612 tttcttcttattccagcttctcaagctcacccattcgctctat 157570
to top
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  194 bits (98), Expect = 3e-46
 Identities = 158/178 (88%)
 Strand = Plus / Plus

                                                                         
Query: 374   accttgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaat 433
             ||||||||||| ||||||||||| || ||||||||||| |||||||||||||| || |||
Sbjct: 49888 accttgtggaaattaaatactaagtcgagttcacacacattgctgaagaaatgatctaat 49947

                                                                         
Query: 434   atctccacaaataagtggatacattccaaatataccaactcattatccgtgatatctaca 493
             ||||| ||||| |||||||| |||||||| ||| |||||||||| || |||||||| |||
Sbjct: 49948 atctcgacaaacaagtggatgcattccaagtatgccaactcattgtcagtgatatccaca 50007

                                                                       
Query: 494   catattgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaact 551
             || ||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||
Sbjct: 50008 cacattgagaaaaacagtcctgcatatcgcctgtatataactttatgcgtccggaact 50065



 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                         
Query: 598   cacctcatactcaaccttgtgcttctccgagtcctcgagcgggacgtagtacttggcaag 657
             |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 51365 cacctcgtactcgaccttgtgcttctccgagtcctcgagcgggacgtagtacttggccag 51424

                                     
Query: 658   ccgcgtcttcccctgccggttctg 681
             |||||||||||||||||| |||||
Sbjct: 51425 ccgcgtcttcccctgccgattctg 51448



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                         
Query: 318   ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
             |||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 48959 ttttgcttgtctcttgaagttctccagcgagaataaactcatccaatatcaaataaacct 49018



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                  
Query: 550   ctcaacgaagttagtgaacttgggatccctgttgacgaccagccgatgcacct 602
             |||||||||||| |||||||||||||||| |||||| ||||||||||||||||
Sbjct: 51234 ctcaacgaagttggtgaacttgggatcccggttgaccaccagccgatgcacct 51286



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 267   tttcttcttaatccagcttctcaagttcacccattctctctat 309
             |||||||||| |||||||||||||| |||||||||| ||||||
Sbjct: 48078 tttcttcttattccagcttctcaagctcacccattcgctctat 48120
to top
>ref|NM_103681.2| Arabidopsis thaliana unknown protein AT1G47830 mRNA, complete cds
          Length = 808

 Score =  165 bits (83), Expect = 3e-37
 Identities = 212/255 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
           |||||||||||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||
Sbjct: 516 ttttgcttgtttcttggagctccccagcaagaatgaactcatcgagtatcaagtacacct 457

                                                                       
Query: 378 tgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatct 437
           ||||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||
Sbjct: 456 tgtggaaattaaacaccaaatctagctcacaaacattgctgaagaaatggtccaatatct 397

                                                                       
Query: 438 ccacaaataagtggatacattccaaatataccaactcattatccgtgatatctacacata 497
           ||||||| || |||||||  ||||| ||  |||||||||| || || ||||| || || |
Sbjct: 396 ccacaaacaaatggatactctccaagtaagccaactcattgtcggttatatccacgcaca 337

                                                                       
Query: 498 ttgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacga 557
             |||||||| | ||| ||||| | |||||| || || ||||| || |  ||||||||||
Sbjct: 336 cagagaaaaacaatccagcataacgcctgtatatcaccttgtgtgttctaaactcaacga 277

                          
Query: 558 agttagtgaacttgg 572
           |||| ||||| ||||
Sbjct: 276 agttggtgaatttgg 262
to top
>gb|BT003048.1| Arabidopsis thaliana At1g47830 gene, complete cds
          Length = 429

 Score =  165 bits (83), Expect = 3e-37
 Identities = 212/255 (83%)
 Strand = Plus / Minus

                                                                       
Query: 318 ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
           |||||||||||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||
Sbjct: 385 ttttgcttgtttcttggagctccccagcaagaatgaactcatcgagtatcaagtacacct 326

                                                                       
Query: 378 tgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatct 437
           ||||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||
Sbjct: 325 tgtggaaattaaacaccaaatctagctcacaaacattgctgaagaaatggtccaatatct 266

                                                                       
Query: 438 ccacaaataagtggatacattccaaatataccaactcattatccgtgatatctacacata 497
           ||||||| || |||||||  ||||| ||  |||||||||| || || ||||| || || |
Sbjct: 265 ccacaaacaaatggatactctccaagtaagccaactcattgtcggttatatccacgcaca 206

                                                                       
Query: 498 ttgagaaaaatagtcctgcatatctcctgtagataactttgtgcgtacggaactcaacga 557
             |||||||| | ||| ||||| | |||||| || || ||||| || |  ||||||||||
Sbjct: 205 cagagaaaaacaatccagcataacgcctgtatatcaccttgtgtgttctaaactcaacga 146

                          
Query: 558 agttagtgaacttgg 572
           |||| ||||| ||||
Sbjct: 145 agttggtgaatttgg 131
to top
>gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana BAC T2E6 from chromosome I,
             complete sequence
          Length = 95816

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                         
Query: 374   accttgtggaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaat 433
             ||||||||||| ||||| || ||||| || ||||| || |||||||||||||||||||||
Sbjct: 29379 accttgtggaaattaaacaccaaatctagctcacaaacattgctgaagaaatggtccaat 29320

                                                         
Query: 434   atctccacaaataagtggatacattccaaatataccaactcatt 477
             ||||||||||| || |||||||  ||||| ||  ||||||||||
Sbjct: 29319 atctccacaaacaaatggatactctccaagtaagccaactcatt 29276



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 318   ttttgcttgtttcttgcagctctccagcgagaataaactcatccaatatcaagtaaacct 377
             |||||||||||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||
Sbjct: 29903 ttttgcttgtttcttggagctccccagcaagaatgaactcatcgagtatcaagtacacct 29844

              
Query: 378   t 378
             |
Sbjct: 29843 t 29843
to top
>dbj|AB022210.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16E1
          Length = 33963

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 382   gaagttaaatactaaatcaagttcacacacgttgctgaagaaatggtccaatatctc 438
             ||||||||| || |||||||  ||||| || |||||||||||||| ||||| |||||
Sbjct: 14014 gaagttaaacaccaaatcaatctcacaaacattgctgaagaaatgatccaaaatctc 13958
to top
>ref|NM_179165.1| Arabidopsis thaliana unknown protein AT4G35410 transcript variant
           AT4G35410.1 mRNA, complete cds
          Length = 884

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 374 accttgtggaagttaaatactaaatcaagttcacacac 411
           ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 400 accttgtggaagttaaaaatcaaatcgagttcacacac 363
to top
>ref|XM_470047.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 793

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 355 ctcatccaatatcaagtaaaccttgtggaagttaaata 392
           |||||||||||| |||||  ||||||||||||| ||||
Sbjct: 509 ctcatccaatataaagtatgccttgtggaagttgaata 472
to top
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 374   accttgtggaagttaaatactaaatcaagttcacacac 411
             ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 98046 accttgtggaagttaaaaatcaaatcgagttcacacac 98009
to top
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA
            project)
          Length = 86710

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 374  accttgtggaagttaaatactaaatcaagttcacacac 411
            ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 5305 accttgtggaagttaaaaatcaaatcgagttcacacac 5342
to top
>gb|AC007485.10| Homo sapiens chromosome 17, clone RP11-257O5, complete sequence
          Length = 164731

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 287    tcaagttcacccattctctctataat 312
              ||||||||||||||||||| ||||||
Sbjct: 132733 tcaagttcacccattctctttataat 132758
to top
>gb|AC023399.4|AC023399 Homo sapiens chromosome 17, clone RP11-780O8, complete sequence
          Length = 175446

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 287    tcaagttcacccattctctctataat 312
              ||||||||||||||||||| ||||||
Sbjct: 122411 tcaagttcacccattctctttataat 122386
to top
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete
             sequence. Sequence from clones T23A1, F5J6, MJB20
          Length = 76170

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 374   accttgtggaagttaaatactaaatcaagttcacacac 411
             ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 55370 accttgtggaagttaaaaatcaaatcgagttcacacac 55333
to top
>dbj|AK071871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118N18, full
           insert sequence
          Length = 898

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 355 ctcatccaatatcaagtaaaccttgtggaagttaaata 392
           |||||||||||| |||||  ||||||||||||| ||||
Sbjct: 463 ctcatccaatataaagtatgccttgtggaagttgaata 426
to top
>gb|U92086.1|ATU92086 Arabidopsis thaliana clathrin assembly protein AP19 homolog (AAP19-2)
            gene, complete cds
          Length = 2833

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 374  accttgtggaagttaaatactaaatcaagttcacacac 411
            ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 1940 accttgtggaagttaaaaatcaaatcgagttcacacac 1903
to top
>gb|U92085.1|ATU92085 Arabidopsis thaliana clathrin assembly protein AP19 homolog (AAP19-1)
            gene, complete cds
          Length = 3964

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 374  accttgtggaagttaaatactaaatcaagttcacacac 411
            ||||||||||||||||| |  ||||| |||||||||||
Sbjct: 2832 accttgtggaagttaaaaatcaaatcgagttcacacac 2795
to top
>ref|NM_127293.2| Arabidopsis thaliana AP19 AT2G17380 (AP19) mRNA, complete cds
          Length = 764

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 448 ccttgtggaagttaaaaatcaaatcgagttcacacac 412
to top
>ref|NM_119707.2| Arabidopsis thaliana unknown protein AT4G35410 transcript variant
           AT4G35410.2 mRNA, complete cds
          Length = 766

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 399 ccttgtggaagttaaaaatcaaatcgagttcacacac 363
to top
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 349     aataaactcatccaatatcaa 369
               |||||||||||||||||||||
Sbjct: 2391663 aataaactcatccaatatcaa 2391683
to top
>gb|BT025619.1| Arabidopsis thaliana At2g17380 mRNA, complete cds
          Length = 486

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 328 ccttgtggaagttaaaaatcaaatcgagttcacacac 292
to top
>ref|XM_389749.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09573.1)
            partial mRNA
          Length = 2079

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 330  cttgcagctctccagcgagaa 350
            |||||||||||||||||||||
Sbjct: 1450 cttgcagctctccagcgagaa 1470
to top
>emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on chromosome Xq13.3-21.1
             Contains the 5' end of the NSBP1 gene for nucleosomal
             binding protein 1 and the SH3BGRL gene for SH3 domain
             binding glutamic acid-rich protein like, complete sequence
          Length = 164012

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 487   atctacacatattgagaaaaatagt 511
             ||||||||||||||| |||||||||
Sbjct: 68110 atctacacatattgaaaaaaatagt 68134
to top
>gb|AC134174.1| Drosophila pseudoobscura  FOSMID DPSF1-548A7 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 41626

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 701   atgctgggtgatgatgatggc 721
             |||||||||||||||||||||
Sbjct: 15672 atgctgggtgatgatgatggc 15692
to top
>emb|Z54285.2|SPAC22F3 S.pombe chromosome I cosmid c22F3
          Length = 38648

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 88   acaaagcaaccatcataaagt 108
            |||||||||||||||||||||
Sbjct: 1007 acaaagcaaccatcataaagt 987
to top
>ref|NM_001018426.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1D4.14),
           partial mRNA
          Length = 4704

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  acaaagcaaccatcataaagt 108
           |||||||||||||||||||||
Sbjct: 931 acaaagcaaccatcataaagt 911
to top
>gb|BT004964.1| Arabidopsis thaliana clone U51102 putative clathrin assembly
           protein AP19 homolog (At4g35410) mRNA, complete cds
          Length = 520

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 328 ccttgtggaagttaaaaatcaaatcgagttcacacac 292
to top
>gb|AY086242.1| Arabidopsis thaliana clone 22906 mRNA, complete sequence
          Length = 758

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 399 ccttgtggaagttaaaaatcaaatcgagttcacacac 363
to top
>gb|AY085130.1| Arabidopsis thaliana clone 13246 mRNA, complete sequence
          Length = 708

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 448 ccttgtggaagttaaaaatcaaatcgagttcacacac 412
to top
>dbj|AK119004.1| Arabidopsis thaliana At4g35410 mRNA for putative clathrin assembly
           protein AP19, complete cds, clone: RAFL21-33-K13
          Length = 757

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 399 ccttgtggaagttaaaaatcaaatcgagttcacacac 363
to top
>gb|U92084.1|ATU92084 Arabidopsis thaliana clathrin assembly protein AP19 mRNA, complete
           cds
          Length = 762

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 375 ccttgtggaagttaaatactaaatcaagttcacacac 411
           |||||||||||||||| |  ||||| |||||||||||
Sbjct: 407 ccttgtggaagttaaaaatcaaatcgagttcacacac 371
to top
>emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on chromosome 11, complete
              sequence
          Length = 225399

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     gatggcaaggaattcctggca 56
              |||||||||||||||||||||
Sbjct: 130634 gatggcaaggaattcctggca 130654
to top
>ref|XM_635826.1| Dictyostelium discoideum hypothetical protein (DDB0204117), partial
            mRNA
          Length = 3318

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  aaatataccaactcattatc 480
            ||||||||||||||||||||
Sbjct: 2157 aaatataccaactcattatc 2176
to top
>gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome 8, complete sequence
          Length = 169014

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 653    gcaagccgcgtcttcccctg 672
              ||||||||||||||||||||
Sbjct: 146742 gcaagccgcgtcttcccctg 146761
to top
>ref|XM_705039.1| Candida albicans SC5314 L1-like non-LTR retrotransposon Zorro 1
            polyprotein (CaO19.3387), mRNA
          Length = 3594

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gccatacagaagttgatgaa 143
            ||||||||||||||||||||
Sbjct: 2003 gccatacagaagttgatgaa 1984
to top
>emb|CT010448.4| Mouse DNA sequence from clone RP23-290P4 on chromosome 17, complete
             sequence
          Length = 136671

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   tctccacaaataagtggata 454
             ||||||||||||||||||||
Sbjct: 85412 tctccacaaataagtggata 85393
to top
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence
          Length = 186848

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   cacatattgagaaaaatagt 511
             ||||||||||||||||||||
Sbjct: 95453 cacatattgagaaaaatagt 95472
to top
>emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A17 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 105104

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   cacaaataagtggatacatt 458
             ||||||||||||||||||||
Sbjct: 33665 cacaaataagtggatacatt 33684
to top
>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21,
             complete sequence
          Length = 151218

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   atacattccaaatataccaa 471
             ||||||||||||||||||||
Sbjct: 77670 atacattccaaatataccaa 77651
to top
>gb|AC123298.4| Rattus norvegicus  BAC CH230-352N4 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 175621

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   tttttgcttgtttcttgcag 336
             ||||||||||||||||||||
Sbjct: 42150 tttttgcttgtttcttgcag 42131
to top
>gb|AY122194.1| Drosophila melanogaster LD44686 full insert cDNA
          Length = 3901

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 488 tctacacatattgagaaaaatagt 511
           |||||||||||||| |||||||||
Sbjct: 905 tctacacatattgaaaaaaatagt 882
to top
>ref|NM_176728.1| Drosophila melanogaster CG33174-RA, transcript variant A (CG33174),
           mRNA
          Length = 2786

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 488 tctacacatattgagaaaaatagt 511
           |||||||||||||| |||||||||
Sbjct: 905 tctacacatattgaaaaaaatagt 882
to top
>ref|NM_176727.1| Drosophila melanogaster CG33174-RD, transcript variant D (CG33174),
           mRNA
          Length = 5883

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 488 tctacacatattgagaaaaatagt 511
           |||||||||||||| |||||||||
Sbjct: 905 tctacacatattgaaaaaaatagt 882
to top
>gb|AC099517.2| Homo sapiens chromosome 5 clone RP11-5H14, complete sequence
          Length = 150438

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   ttcacccattctctctataa 311
             ||||||||||||||||||||
Sbjct: 60672 ttcacccattctctctataa 60691
to top
>gb|AF139376.1| Candida albicans non-LTR retrotransposon Zorro 1 reverse
           transcriptase gene, partial cds
          Length = 1055

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 gccatacagaagttgatgaa 143
           ||||||||||||||||||||
Sbjct: 443 gccatacagaagttgatgaa 424
to top
>gb|AC015524.7|AC015524 Homo sapiens chromosome 18, clone RP11-202D1, complete sequence
          Length = 178985

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 483   tgatatctacacatattgagaaaa 506
             ||||||||||||||||||| ||||
Sbjct: 71884 tgatatctacacatattgaaaaaa 71861
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 452      atacattccaaatataccaa 471
                ||||||||||||||||||||
Sbjct: 13083857 atacattccaaatataccaa 13083838
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 452     atacattccaaatataccaa 471
               ||||||||||||||||||||
Sbjct: 6339040 atacattccaaatataccaa 6339021
to top
>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23,
             complete sequence
          Length = 165683

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   atacattccaaatataccaa 471
             ||||||||||||||||||||
Sbjct: 16067 atacattccaaatataccaa 16048
to top
>gb|AC147908.2| Xenopus tropicalis clone CH216-7L4, complete sequence
          Length = 183527

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   agtaaaccttgtggaagttaaata 392
             ||||||||||||||| ||||||||
Sbjct: 40230 agtaaaccttgtggatgttaaata 40207
to top
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete
             sequence
          Length = 227632

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   cacatattgagaaaaatagt 511
             ||||||||||||||||||||
Sbjct: 91397 cacatattgagaaaaatagt 91378
to top
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   atacattccaaatataccaa 471
             ||||||||||||||||||||
Sbjct: 89600 atacattccaaatataccaa 89581
to top
>gb|AC147209.2| Xenopus tropicalis clone CH216-50L16, complete sequence
          Length = 176731

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   agtaaaccttgtggaagttaaata 392
             ||||||||||||||| ||||||||
Sbjct: 31149 agtaaaccttgtggatgttaaata 31126
to top
>gb|AC006160.9|AC006160 Homo sapiens chromosome 4 clone C0481P14 map 4p16, complete sequence
          Length = 179310

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   acacattttcttcttaatccagct 284
             |||||||||||||||||| |||||
Sbjct: 89974 acacattttcttcttaatacagct 89951
to top
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 83015

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  atacattccaaatataccaa 471
            ||||||||||||||||||||
Sbjct: 8800 atacattccaaatataccaa 8781
to top
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104849

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   atacattccaaatataccaa 471
             ||||||||||||||||||||
Sbjct: 36652 atacattccaaatataccaa 36633
to top
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 359     tccaatatcaagtaaacctt 378
               ||||||||||||||||||||
Sbjct: 1388038 tccaatatcaagtaaacctt 1388019
to top
>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 653   gcaagccgcgtcttcccctg 672
             ||||||||||||||||||||
Sbjct: 62497 gcaagccgcgtcttcccctg 62516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,034,837
Number of Sequences: 3902068
Number of extensions: 7034837
Number of successful extensions: 125189
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124871
Number of HSP's gapped (non-prelim): 317
length of query: 726
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 703
effective length of database: 17,143,297,704
effective search space: 12051738285912
effective search space used: 12051738285912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top