ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags9c11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 Score = 105 bits (53), Expect = 2e-20 Identities = 72/79 (91%) Strand = Plus / Minus Query: 2 tcaatgcctcagaatcaggccttggcagcagcctgagctgcggcatccctcttcctctgc 61 |||| |||||||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 907 tcaacgcctcagaatcaggccttggcagctgcctgggcagcggcatccctcttcctctgc 848 Query: 62 tcctnaatgntggtgagct 80 |||| |||| |||| |||| Sbjct: 847 tcctcaatgatggtcagct 829
>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds Length = 1037 Score = 50.1 bits (25), Expect = 9e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctc 63 |||||||||||||| || |||||||||| |||||| ||||| Sbjct: 862 ttggcagcagcctgggcagcggcatcccgcttcctttgctc 822
>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds Length = 1013 Score = 50.1 bits (25), Expect = 9e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctc 63 |||||||||||||| || |||||||||| |||||| ||||| Sbjct: 864 ttggcagcagcctgggcagcggcatcccgcttcctttgctc 824
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.003 Identities = 49/58 (84%) Strand = Plus / Plus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || || ||||||| |||||| ||||||| ||| || |||||| Sbjct: 316967 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagct 317024
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 48.1 bits (24), Expect = 0.003 Identities = 49/58 (84%) Strand = Plus / Plus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || || ||||||| |||||| ||||||| ||| || |||||| Sbjct: 45751 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagct 45808
>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full insert sequence Length = 1016 Score = 48.1 bits (24), Expect = 0.003 Identities = 49/58 (84%) Strand = Plus / Minus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || || ||||||| |||||| ||||||| ||| || |||||| Sbjct: 886 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagct 829
>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full insert sequence Length = 1157 Score = 48.1 bits (24), Expect = 0.003 Identities = 49/58 (84%) Strand = Plus / Minus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || || ||||||| |||||| ||||||| ||| || |||||| Sbjct: 890 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagct 833
>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full insert sequence Length = 1079 Score = 48.1 bits (24), Expect = 0.003 Identities = 49/58 (84%) Strand = Plus / Minus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || || ||||||| |||||| ||||||| ||| || |||||| Sbjct: 882 ttggcagcagcctgggcggcagcatcccgcttcctttgctcctcgatgatgctgagct 825
>ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 768 Score = 42.1 bits (21), Expect = 0.21 Identities = 46/55 (83%) Strand = Plus / Minus Query: 26 gcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || ||||| | ||||||||| |||| ||| || |||||| Sbjct: 758 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagct 704
>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence Length = 1145 Score = 42.1 bits (21), Expect = 0.21 Identities = 36/41 (87%) Strand = Plus / Plus Query: 23 ttggcagcagcctgagctgcggcatccctcttcctctgctc 63 |||||||||||||| || || ||||||| |||||| ||||| Sbjct: 178 ttggcagcagcctgggcagcagcatcccgcttcctttgctc 218
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.21 Identities = 46/55 (83%) Strand = Plus / Minus Query: 26 gcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || ||||| | ||||||||| |||| ||| || |||||| Sbjct: 14497969 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagct 14497915
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 42.1 bits (21), Expect = 0.21 Identities = 46/55 (83%) Strand = Plus / Minus Query: 26 gcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || ||||| | ||||||||| |||| ||| || |||||| Sbjct: 57282 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagct 57228
>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full insert sequence Length = 1035 Score = 42.1 bits (21), Expect = 0.21 Identities = 46/55 (83%) Strand = Plus / Minus Query: 26 gcagcagcctgagctgcggcatccctcttcctctgctcctnaatgntggtgagct 80 |||||||||||||| || ||||| | ||||||||| |||| ||| || |||||| Sbjct: 875 gcagcagcctgagcagcagcatctcgcttcctctgttcctcgatgatgctgagct 821
>gb|BC025658.1| Homo sapiens glycine/arginine rich protein 1, mRNA (cDNA clone MGC:34152 IMAGE:5198480), complete cds Length = 1554 Score = 40.1 bits (20), Expect = 0.84 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gaatcaggccttggcagcagcctg 36 |||||||||||||||||| ||||| Sbjct: 421 gaatcaggccttggcagccgcctg 398
>ref|XM_509097.1| PREDICTED: Pan troglodytes similar to EIG-1 (LOC451938), mRNA Length = 606 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 606 tcaggccttagcagtagcctgagctgc 580
>gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome 16, complete sequence Length = 206061 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 tcagaatcaggccttggca 28 ||||||||||||||||||| Sbjct: 106713 tcagaatcaggccttggca 106695
>gb|AY585261.1| Bifidobacterium breve strain UCC2003 response regulator gene, partial cds; and hypothetical proteins, GroEL (groEL), and CspA (cspA) genes, complete cds Length = 4210 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 ggccttggcagcagcctga 37 ||||||||||||||||||| Sbjct: 2462 ggccttggcagcagcctga 2480
>ref|NM_175556.2| Mus musculus phospholipase C-like 4 (Plcl4), mRNA Length = 5324 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 4607 cagcagcctgagctgcggc 4625
>gb|DQ176851.1| Mus musculus strain C57BL/6J phospholipase C-eta2 (Plc-eta2) mRNA, complete cds Length = 4791 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 4074 cagcagcctgagctgcggc 4092
>ref|NM_002624.3| Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 1, mRNA Length = 743 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 582 tcaggccttagcagtagcctgagctgc 556
>ref|NM_145897.2| Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 3, mRNA Length = 608 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 447 tcaggccttagcagtagcctgagctgc 421
>ref|NM_145896.2| Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 2, mRNA Length = 711 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 550 tcaggccttagcagtagcctgagctgc 524
>gb|AC147681.8| Canis Familiaris, clone XX-10A1, complete sequence Length = 160031 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 tccctcttcctctgctcct 65 ||||||||||||||||||| Sbjct: 75373 tccctcttcctctgctcct 75391
>ref|NM_174732.2| Bos taurus prefoldin 5 (PFDN5), mRNA Length = 957 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 |||||||||||| | |||||||||||| Sbjct: 477 tcaggccttggcggtagcctgagctgc 451
>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete sequence Length = 239237 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 tggcagcagcctgagctgc 42 ||||||||||||||||||| Sbjct: 207075 tggcagcagcctgagctgc 207057
>gb|BC062671.1| Homo sapiens prefoldin subunit 5, transcript variant 1, mRNA (cDNA clone MGC:71907 IMAGE:6458093), complete cds Length = 625 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 494 tcaggccttagcagtagcctgagctgc 468
>gb|AY266334.1| Bifidobacterium longum bv. Infantis heat shock protein 60 gene, partial cds; hypothetical protein gene, complete cds; birB-like and bikB-like genes, complete sequence; and cold shock protein B and hypothetical protein genes, complete cds Length = 7001 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 ggccttggcagcagcctga 37 ||||||||||||||||||| Sbjct: 456 ggccttggcagcagcctga 438
>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains the 3' end of the SIAT7E gene for sialyltransferase 7 ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, a novel gene and 3' end of the PIGK gene for phosphatidylinositol glycan class K, complete sequence Length = 138783 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ggcatccctcttcctctgc 61 ||||||||||||||||||| Sbjct: 37522 ggcatccctcttcctctgc 37504
>ref|XM_795025.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC581083 (LOC581083), mRNA Length = 1197 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 tccctcttcctctgctcct 65 ||||||||||||||||||| Sbjct: 764 tccctcttcctctgctcct 746
>emb|AL935260.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 9/11 Length = 298050 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 caggccttggcagcagcct 35 ||||||||||||||||||| Sbjct: 130819 caggccttggcagcagcct 130801
>gb|AC158920.4| Mus musculus chromosome 5, clone RP24-238C7, complete sequence Length = 156671 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttggcagcagcctgagc 39 ||||||||||||||||||| Sbjct: 41450 ccttggcagcagcctgagc 41468
>emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 in linkage group 23 Contains three novel genes and a CpG island, complete sequence Length = 205160 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 gcatccctcttcctctgct 62 ||||||||||||||||||| Sbjct: 129839 gcatccctcttcctctgct 129857
>emb|CR858881.1| Pongo pygmaeus mRNA; cDNA DKFZp469G1410 (from clone DKFZp469G1410) Length = 650 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 491 tcaggccttagcagtagcctgagctgc 465
>emb|CR597448.1| full-length cDNA clone CS0DI057YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 575 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 470 tcaggccttagcagtagcctgagctgc 444
>dbj|AK024094.1| Homo sapiens cDNA FLJ14032 fis, clone HEMBA1004353, highly similar to C-MYC BINDING PROTEIN MM-1 Length = 1983 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 1882 tcaggccttagcagtagcctgagctgc 1856
>dbj|AB055805.1| Homo sapiens mRNA for MM-1 gamma, complete cds Length = 517 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 356 tcaggccttagcagtagcctgagctgc 330
>dbj|AB055804.1| Homo sapiens mRNA for MM-1 beta, complete cds Length = 600 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 459 tcaggccttagcagtagcctgagctgc 433
>dbj|AB055803.1| Homo sapiens mRNA for MM-1 alpha, complete cds Length = 599 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 491 tcaggccttagcagtagcctgagctgc 465
>gb|BC003373.1| Homo sapiens prefoldin subunit 5, transcript variant 1, mRNA (cDNA clone IMAGE:2900793) Length = 622 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 500 tcaggccttagcagtagcctgagctgc 474
>gb|BC102252.1| Bos taurus prefoldin 5, mRNA (cDNA clone MGC:127075 IMAGE:7943026), complete cds Length = 642 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 |||||||||||| | |||||||||||| Sbjct: 485 tcaggccttggcggtagcctgagctgc 459
>dbj|AK044619.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930027K05 product:hypothetical Phosphatidylinositol-specific phospholipase C, X domain containing protein, full insert sequence Length = 5324 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 4607 cagcagcctgagctgcggc 4625
>gb|AC158655.4| Mus musculus BAC RP23-406J21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201519 Score = 38.2 bits (19), Expect = 3.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 43 ggcatccctcttcctctgctcct 65 ||||||||||| ||||||||||| Sbjct: 71726 ggcatccctctgcctctgctcct 71748
>gb|AF463679.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 934 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 39 ctgcggcatccctcttcctctgctcct 65 |||||| |||||||| ||||||||||| Sbjct: 481 ctgcggaatccctctgcctctgctcct 455
>gb|AC073611.29| Homo sapiens 12 BAC RP11-680A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106551 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 25109 tcaggccttagcagtagcctgagctgc 25083
>gb|AF520958.1| Bos taurus prefoldin 5 mRNA, complete cds Length = 957 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 |||||||||||| | |||||||||||| Sbjct: 477 tcaggccttggcggtagcctgagctgc 451
>dbj|AK129147.1| Mus musculus mRNA for mKIAA0450 protein Length = 5333 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 4365 cagcagcctgagctgcggc 4383
>gb|BC060083.1| Mus musculus phospholipase C-like 4, mRNA (cDNA clone IMAGE:5715900), partial cds Length = 3226 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 2216 cagcagcctgagctgcggc 2234
>gb|BC052329.1| Mus musculus phospholipase C-like 4, mRNA (cDNA clone IMAGE:6466491), partial cds Length = 4362 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 3560 cagcagcctgagctgcggc 3578
>gb|BC040465.1| Mus musculus phospholipase C-like 4, mRNA (cDNA clone IMAGE:4507377), partial cds Length = 4205 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 3438 cagcagcctgagctgcggc 3456
>gb|BC036966.1| Mus musculus phospholipase C-like 4, mRNA (cDNA clone IMAGE:4511285), with apparent retained intron Length = 1662 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 934 cagcagcctgagctgcggc 952
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 gccttggcagcagcctgag 38 ||||||||||||||||||| Sbjct: 10596 gccttggcagcagcctgag 10614
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 39 ctgcggcatccctcttcctctgctcct 65 |||||| |||||||| ||||||||||| Sbjct: 123561 ctgcggaatccctctgcctctgctcct 123587
>emb|BX004788.7| Mouse DNA sequence from clone RP24-89N4 on chromosome 4, complete sequence Length = 81476 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 cagcagcctgagctgcggc 45 ||||||||||||||||||| Sbjct: 65884 cagcagcctgagctgcggc 65866
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 ggccttggcagcagcctga 37 ||||||||||||||||||| Sbjct: 1797 ggccttggcagcagcctga 1779
>gb|AC132834.4| Homo sapiens chromosome 8, clone CTD-2344M9, complete sequence Length = 156318 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 tccctcttcctctgctcct 65 ||||||||||||||||||| Sbjct: 102851 tccctcttcctctgctcct 102833
>emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chromosome 2, complete sequence Length = 200141 Score = 38.2 bits (19), Expect = 3.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tcaatgcctcagaatcagg 20 ||||||||||||||||||| Sbjct: 85522 tcaatgcctcagaatcagg 85504
>dbj|D89667.1| Homo sapiens mRNA for c-myc binding protein, complete cds Length = 1035 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 927 tcaggccttagcagtagcctgagctgc 901
>dbj|AB055802.1| Homo sapiens gene for MM-1, complete cds Length = 7870 Score = 38.2 bits (19), Expect = 3.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 16 tcaggccttggcagcagcctgagctgc 42 ||||||||| |||| |||||||||||| Sbjct: 7038 tcaggccttagcagtagcctgagctgc 7012 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 747,769 Number of Sequences: 3902068 Number of extensions: 747769 Number of successful extensions: 61402 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61301 Number of HSP's gapped (non-prelim): 101 length of query: 80 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 59 effective length of database: 17,151,101,840 effective search space: 1011915008560 effective search space used: 1011915008560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
