>gb|BT012823.1| Lycopersicon esculentum clone 113874R, mRNA sequence
          Length = 1125

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 69  aatggaggcagcaaatcatgag 90
           ||||||||||||||||||||||
Sbjct: 155 aatggaggcagcaaatcatgag 176

>emb|Z92973.1|CEY6G8 Caenorhabditis elegans YAC Y6G8, complete sequence
          Length = 33038

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 397   tctgtgatttttctaacttgttactccaac 426
             ||||||||||||||||||| || |||||||
Sbjct: 14294 tctgtgatttttctaacttttttctccaac 14323

>emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chromosome X Contains gene
             FLJ30058, the 5' end of a novel gene and four CpG islands,
             complete sequence
          Length = 146343

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2     ataaaataatctgaatagtttt 23
             ||||||||||||||||||||||
Sbjct: 73338 ataaaataatctgaatagtttt 73317

>emb|AL139286.13| Human DNA sequence from clone RP4-789D17 on chromosome 1p34.1-34.3
             Contains the EIF2C1 gene for eukaryotic translation
             initiation factor 2C, 1, the 5' end of the EIF2C3 gene for
             eukaryotic translation initiation factor 2C, 3 and two CpG
             islands, complete sequence
          Length = 138177

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 397   tctgtgatttttctaacttgtt 418
             ||||||||||||||||||||||
Sbjct: 15560 tctgtgatttttctaacttgtt 15581

>emb|BX000480.6| Zebrafish DNA sequence from clone DKEY-14C5 in linkage group 17,
             complete sequence
          Length = 191781

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 210   agagcattttctgcctgctgtgaagtaact 239
             ||||||||||||||||| | ||||||||||
Sbjct: 72962 agagcattttctgcctggtttgaagtaact 72933

>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE
          Length = 136080

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 4    aaaataatctgaatagttttt 24
            |||||||||||||||||||||
Sbjct: 1613 aaaataatctgaatagttttt 1633

>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence
          Length = 149005

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     aaaataatctgaatagttttt 24
             |||||||||||||||||||||
Sbjct: 11084 aaaataatctgaatagttttt 11064

>gb|AC155300.2| Mus musculus BAC clone RP24-232D3 from chromosome 12, complete
            sequence
          Length = 176261

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 456  cccttctttccagtgagtat 475
            ||||||||||||||||||||
Sbjct: 2084 cccttctttccagtgagtat 2065

>gb|AC119892.10| Mus musculus chromosome 12, clone RP24-224L20, complete sequence
          Length = 153665

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   cccttctttccagtgagtat 475
             ||||||||||||||||||||
Sbjct: 99475 cccttctttccagtgagtat 99456

>gb|AE013103.1| Thermoanaerobacter tengcongensis MB4, section 130 of 244 of the
           complete genome
          Length = 6228

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 ttcgtacttgtttaagctgt 389
           ||||||||||||||||||||
Sbjct: 949 ttcgtacttgtttaagctgt 968

>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   gagtgatacgagtctatcaa 300
             ||||||||||||||||||||
Sbjct: 46856 gagtgatacgagtctatcaa 46875

>gb|AC163215.4| Mus musculus chromosome 3, clone RP24-61G19, complete sequence
          Length = 184123

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     acccaatatgatacatttct 115
              ||||||||||||||||||||
Sbjct: 104089 acccaatatgatacatttct 104108

>emb|AL355794.5| Human DNA sequence from clone RP4-781D12 on chromosome 1 Contains the
             5' end of a nucleosome assembly protein 1-like 4 (NAP1L4)
             pseudogene, the 5' end of the CD58  gene for CD58 antigen,
             (lymphocyte function-associated antigen 3), the 3' end of
             the IGSF3 gene for immunoglobulin superfamily member 3 and
             a CpG island, complete sequence
          Length = 88484

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ataccccttctttccagtga 471
             ||||||||||||||||||||
Sbjct: 76029 ataccccttctttccagtga 76048

>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the
             RAB18 gene for RAB18, member RAS oncogene family and a CpG
             island, complete sequence
          Length = 168217

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   atcaattatattttttgtac 315
             ||||||||||||||||||||
Sbjct: 19190 atcaattatattttttgtac 19209

>emb|AL136100.12| Human DNA sequence from clone RP11-534P19 on chromosome 6 Contains a
             pseudogene similar to zinc finger proteins, complete
             sequence
          Length = 172212

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   tatttctatgattattacac 492
             ||||||||||||||||||||
Sbjct: 16380 tatttctatgattattacac 16399

>gb|AC073585.8| Homo sapiens chromosome 10 clone RP11-564D11, complete sequence
          Length = 197295

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   gtgatttttctaacttgtta 419
             ||||||||||||||||||||
Sbjct: 88457 gtgatttttctaacttgtta 88438

>emb|CR538741.13| Zebrafish DNA sequence from clone DKEY-97J15 in linkage group 5, complete
              sequence
          Length = 122930

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    aataatcacagttacacttt 145
              ||||||||||||||||||||
Sbjct: 117650 aataatcacagttacacttt 117631

>gb|AC113397.2| Homo sapiens chromosome 5 clone RP11-433B15, complete sequence
          Length = 162386

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 631    caattttaggcaccaaattg 650
              ||||||||||||||||||||
Sbjct: 118893 caattttaggcaccaaattg 118874

>gb|AC051638.24| Mus musculus chromosome 6, clone RP23-177J17, complete sequence
          Length = 231841

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 638   aggcaccaaattgccatccaacaa 661
             |||||||||||||||||| |||||
Sbjct: 49149 aggcaccaaattgccatctaacaa 49172

>gb|AC020687.6| Homo sapiens chromosome 15, clone RP11-648K4, complete sequence
          Length = 169571

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     caagaacgccatatatttgc 67
              ||||||||||||||||||||
Sbjct: 159033 caagaacgccatatatttgc 159052

>gb|AC005815.1| Homo sapiens chromosome 22 clone 239d10 map 22q11, complete sequence
          Length = 183085

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ataccccttctttccagtga 471
             ||||||||||||||||||||
Sbjct: 78374 ataccccttctttccagtga 78393

>gb|AC026029.8| Homo sapiens BAC clone RP11-16G16 from 4, complete sequence
          Length = 173067

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      aaaataatctgaatagtttttaca 27
              ||||||||||||||| ||||||||
Sbjct: 148632 aaaataatctgaatattttttaca 148609

>gb|AC141634.4| Mus musculus BAC clone RP24-69A18 from chromosome 6, complete sequence
          Length = 227680

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 638    aggcaccaaattgccatccaacaa 661
              |||||||||||||||||| |||||
Sbjct: 226555 aggcaccaaattgccatctaacaa 226578

>emb|AL672215.11| Mouse DNA sequence from clone RP23-162B19 on chromosome X, complete
              sequence
          Length = 196276

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tctgaatagtttttacaaag 30
              ||||||||||||||||||||
Sbjct: 147677 tctgaatagtttttacaaag 147658

>gb|AC005875.2|AC005875 citb_188_b_12, complete sequence
          Length = 131535

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    atcaattatattttttgtac 315
              ||||||||||||||||||||
Sbjct: 120688 atcaattatattttttgtac 120707

>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete
              sequence
          Length = 148490

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ctttccagtgagtatttcta 480
              ||||||||||||||||||||
Sbjct: 139617 ctttccagtgagtatttcta 139598

>dbj|AB017651.2| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB615C6, complete
             sequence
          Length = 131668

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   ctttccagtgagtatttcta 480
             ||||||||||||||||||||
Sbjct: 37566 ctttccagtgagtatttcta 37547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,844,999
Number of Sequences: 3902068
Number of extensions: 6844999
Number of successful extensions: 127351
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127291
Number of HSP's gapped (non-prelim): 60
length of query: 711
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 688
effective length of database: 17,143,297,704
effective search space: 11794588820352
effective search space used: 11794588820352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)