| Clone Name | rbags9c12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E12, full insert sequence Length = 1245 Score = 470 bits (237), Expect = e-129 Identities = 366/409 (89%) Strand = Plus / Minus Query: 323 catctcttgtgattttgtcgagagcttgtgtaggtcagccacaaccatcagccgtctctg 382 ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 872 catctcttgtgcttttgtcgatgatttgtgtaggtcagaaacaaccattagccgtctctg 813 Query: 383 caagattgccgccatgaagaggaagattgaacacatgccaaacatgacggtgatagggaa 442 || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 812 caggattgccgccatgaagaggaagatagaacacatgccaaacatgacagtgatagggaa 753 Query: 443 agcattcacattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagtt 502 |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 752 tgcattcacattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaatt 693 Query: 503 catgatggtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatgg 562 |||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 692 catgattgtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatgg 633 Query: 563 ccagaaaatgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccacc 622 |||||| |||||||| |||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 632 ccagaatatgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctcc 573 Query: 623 gaacgatatgccgcttcctttcactgaagacgccggcaccagaaggctggtggcaactgg 682 || || |||| | ||||||||||||||| || ||||| |||| | ||||| |||| || Sbjct: 572 aaatgagatgctacctcctttcactgaagaagctggcactagaatgttggtgacaacagg 513 Query: 683 gaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 512 aaggaaaagggtgaaggctgatattgtaaacacgatctgcatataacct 464
>ref|NM_187548.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 462 bits (233), Expect = e-127 Identities = 365/409 (89%) Strand = Plus / Minus Query: 323 catctcttgtgattttgtcgagagcttgtgtaggtcagccacaaccatcagccgtctctg 382 ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 1344 catctcttgtgcttttgtcgatgatttgtgtaggtcagaaacaaccattagccgtctctg 1285 Query: 383 caagattgccgccatgaagaggaagattgaacacatgccaaacatgacggtgatagggaa 442 || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1284 caggattgccgccatgaagaggaagatagaacacatgccaaacatgacagtgatagggaa 1225 Query: 443 agcattcacattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagtt 502 |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1224 tgcattcacattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaatt 1165 Query: 503 catgatggtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatgg 562 |||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1164 catgattgtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatgg 1105 Query: 563 ccagaaaatgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccacc 622 |||||| |||||||| |||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 1104 ccagaatatgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctcc 1045 Query: 623 gaacgatatgccgcttcctttcactgaagacgccggcaccagaaggctggtggcaactgg 682 || || |||| | ||||||||||||||| | ||||| |||| | ||||| |||| || Sbjct: 1044 aaatgagatgctacctcctttcactgaagaagttggcactagaatgttggtgacaacagg 985 Query: 683 gaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 984 aaggaaaagggtgaaggctgatattgtaaacacgatctgcatataacct 936
>dbj|AK065394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023A12, full insert sequence Length = 1912 Score = 462 bits (233), Expect = e-127 Identities = 365/409 (89%) Strand = Plus / Minus Query: 323 catctcttgtgattttgtcgagagcttgtgtaggtcagccacaaccatcagccgtctctg 382 ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 1546 catctcttgtgcttttgtcgatgatttgtgtaggtcagaaacaaccattagccgtctctg 1487 Query: 383 caagattgccgccatgaagaggaagattgaacacatgccaaacatgacggtgatagggaa 442 || |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1486 caggattgccgccatgaagaggaagatagaacacatgccaaacatgacagtgatagggaa 1427 Query: 443 agcattcacattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagtt 502 |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1426 tgcattcacattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaatt 1367 Query: 503 catgatggtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatgg 562 |||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1366 catgattgtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatgg 1307 Query: 563 ccagaaaatgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccacc 622 |||||| |||||||| |||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 1306 ccagaatatgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctcc 1247 Query: 623 gaacgatatgccgcttcctttcactgaagacgccggcaccagaaggctggtggcaactgg 682 || || |||| | ||||||||||||||| | ||||| |||| | ||||| |||| || Sbjct: 1246 aaatgagatgctacctcctttcactgaagaagttggcactagaatgttggtgacaacagg 1187 Query: 683 gaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1186 aaggaaaagggtgaaggctgatattgtaaacacgatctgcatataacct 1138
>gb|BT018754.1| Zea mays clone EL01N0523E04.d mRNA sequence Length = 1723 Score = 307 bits (155), Expect = 3e-80 Identities = 341/403 (84%) Strand = Plus / Minus Query: 294 taaggatttagcggctcgtcttccccggtcatctcttgtgattttgtcgagagcttgtgt 353 ||||||||||| ||||| ||||||||| |||| ||||||| ||| || || |||||| Sbjct: 1483 taaggatttagtggctcatcttccccgatcatttcttgtgctttagttgatgatttgtgt 1424 Query: 354 aggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaa 413 || || | ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1423 agatccgagacaaccatcagccgtctctgcaagattgctgccatgaagaggaagatagaa 1364 Query: 414 cacatgccaaacatgacggtgatagggaaagcattcacattgtagagcaccacacacaca 473 ||||| || |||||||| ||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 1363 cacatcccgaacatgacagtgatagggaatgcgttcacattgtaaagcaccacacaaaca 1304 Query: 474 aacaggttcagtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggata 533 || | ||| || || ||||||||||| |||||||| ||||| ||||| |||||||| || Sbjct: 1303 aataagttgagagggatgcggaagaaattcatgattgtgcttcttgcttcctcaggaatg 1244 Query: 534 tactgagatctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggta 593 |||||||| |||||||||||||| ||||||||||| ||||||||||| | ||| ||||| Sbjct: 1243 tactgagacctcatcttcatgattgatggccagaatatgccaacacaggcctcgaaggtg 1184 Query: 594 cagaaaccaagcagctgcagggagccaccgaacgatatgccgcttcctttcactgaagac 653 ||||||||||| ||||| || || || || | |||||||| || ||||||||| ||||| Sbjct: 1183 cagaaaccaagaagctgaagagaacctccaatcgatatgctgcctcctttcacagaagat 1124 Query: 654 gccggcaccagaaggctggtggcaactgggaggaaaagggtga 696 | ||||| || | | ||||| |||| ||||||| |||||||| Sbjct: 1123 gtgggcactaggatgttggtgacaacagggaggacaagggtga 1081
>ref|NM_197382.1| Oryza sativa (japonica cultivar-group) putative transporter (OSJNBb0018B10.4), mRNA Length = 1697 Score = 301 bits (152), Expect = 2e-78 Identities = 224/248 (90%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 1304 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 1245 Query: 423 aacatgacggtgatagggaaagcattcacattgtagagcaccacacacacaaacaggttc 482 |||||||| ||||| ||||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 1244 aacatgacagtgatggggaatgcattcacattgtaaagaaccacacaaacaaacaggttg 1185 Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 1184 agtggtatgcggaagaagttcatgatcgtgcttcttgcctcctcaggaatatactgggac 1125 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacca 602 |||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 1124 ctcatcttcatgattgatggccagaaaatgccaacacaggattcaaatatacagaaaccg 1065 Query: 603 agcagctg 610 |||||||| Sbjct: 1064 agcagctg 1057 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 991 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 936
>dbj|AK061924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B12, full insert sequence Length = 1466 Score = 301 bits (152), Expect = 2e-78 Identities = 224/248 (90%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 1044 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 985 Query: 423 aacatgacggtgatagggaaagcattcacattgtagagcaccacacacacaaacaggttc 482 |||||||| ||||| ||||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 984 aacatgacagtgatggggaatgcattcacattgtaaagaaccacacaaacaaacaggttg 925 Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 924 agtggtatgcggaagaagttcatgatcgtgcttcttgcctcctcaggaatatactgggac 865 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacca 602 |||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 864 ctcatcttcatgattgatggccagaaaatgccaacacaggattcaaatatacagaaaccg 805 Query: 603 agcagctg 610 |||||||| Sbjct: 804 agcagctg 797 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 731 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 676
>dbj|AK103488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M19, full insert sequence Length = 1779 Score = 301 bits (152), Expect = 2e-78 Identities = 224/248 (90%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 1386 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 1327 Query: 423 aacatgacggtgatagggaaagcattcacattgtagagcaccacacacacaaacaggttc 482 |||||||| ||||| ||||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 1326 aacatgacagtgatggggaatgcattcacattgtaaagaaccacacaaacaaacaggttg 1267 Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 1266 agtggtatgcggaagaagttcatgatcgtgcttcttgcctcctcaggaatatactgggac 1207 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacca 602 |||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 1206 ctcatcttcatgattgatggccagaaaatgccaacacaggattcaaatatacagaaaccg 1147 Query: 603 agcagctg 610 |||||||| Sbjct: 1146 agcagctg 1139 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 1073 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 1018
>gb|AY105578.1| Zea mays PCO062070 mRNA sequence Length = 579 Score = 246 bits (124), Expect = 9e-62 Identities = 231/266 (86%), Gaps = 3/266 (1%) Strand = Plus / Minus Query: 294 taaggatttagcggctcgtcttccccggtcatctcttgtgattttgtcgagagcttgtgt 353 ||||||||||| ||||| ||||||||| |||| ||||||| ||| || || |||||| Sbjct: 271 taaggatttagtggctcatcttccccgatcatttcttgtgctttagttgatgatttgtgt 212 Query: 354 a---ggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaagatt 410 | | |||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 211 acttgatcagagacaaccatcagccgtctctgcaagattgctgccatgaagaggaagata 152 Query: 411 gaacacatgccaaacatgacggtgatagggaaagcattcacattgtagagcaccacacac 470 |||||||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 151 gaacacatcccaaacatgacagtgatagggaatgcattcacgttgtaaagcaccacacaa 92 Query: 471 acaaacaggttcagtggtatgcggaagaagttcatgatggtgctccttgcctcctcaggg 530 ||||| | ||| || ||||||||||||||||||||||| ||||| || || |||||||| Sbjct: 91 acaaataagttgagcggtatgcggaagaagttcatgattgtgcttctcgcttcctcagga 32 Query: 531 atatactgagatctcatcttcatgat 556 || ||||||||||||||||||||||| Sbjct: 31 atgtactgagatctcatcttcatgat 6
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 8e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 824071 acattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaattcatgatt 824012 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 824011 gtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatggccagaat 823952 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccaccgaacgat 629 |||||||| |||| |||||||||||||||||||||||||||||| | ||| || || || Sbjct: 823951 atgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctccaaatgag 823892 Query: 630 atgccgcttcctttcactgaaga 652 |||| | ||||||||||||||| Sbjct: 823891 atgctacctcctttcactgaaga 823869 Score = 151 bits (76), Expect = 4e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 348 ttgtgtaggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaag 407 ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 824259 ttgtgtaggtcagaaacaaccattagccgtctctgcaggattgccgccatgaagaggaag 824200 Query: 408 attgaacacatgccaaacatgacggtgatagggaaagcattcac 451 || |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 824199 atagaacacatgccaaacatgacagtgatagggaatgcattcac 824156 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 670 tggtggcaactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataac 729 ||||| |||| || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 823771 tggtgacaacaggaaggaaaagggtgaaggctgatattgtaaacacgatctgcatataac 823712 Query: 730 ct 731 || Sbjct: 823711 ct 823710
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 8e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 824069 acattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaattcatgatt 824010 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 824009 gtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatggccagaat 823950 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccaccgaacgat 629 |||||||| |||| |||||||||||||||||||||||||||||| | ||| || || || Sbjct: 823949 atgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctccaaatgag 823890 Query: 630 atgccgcttcctttcactgaaga 652 |||| | ||||||||||||||| Sbjct: 823889 atgctacctcctttcactgaaga 823867 Score = 151 bits (76), Expect = 4e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 348 ttgtgtaggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaag 407 ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 824257 ttgtgtaggtcagaaacaaccattagccgtctctgcaggattgccgccatgaagaggaag 824198 Query: 408 attgaacacatgccaaacatgacggtgatagggaaagcattcac 451 || |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 824197 atagaacacatgccaaacatgacagtgatagggaatgcattcac 824154 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 670 tggtggcaactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataac 729 ||||| |||| || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 823769 tggtgacaacaggaaggaaaagggtgaaggctgatattgtaaacacgatctgcatataac 823710 Query: 730 ct 731 || Sbjct: 823709 ct 823708
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 236 bits (119), Expect = 8e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 119616 acattgtaaagcaccacacaaacaaacaagttcagtggtatgcggaagaaattcatgatt 119557 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 119556 gtgcttcttgcctcctcaggaatatattgagatctcatcttcatgattgatggccagaat 119497 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctgcagggagccaccgaacgat 629 |||||||| |||| |||||||||||||||||||||||||||||| | ||| || || || Sbjct: 119496 atgccaacgcatgcctcaaaggtacagaaaccaagcagctgcagagtgcctccaaatgag 119437 Query: 630 atgccgcttcctttcactgaaga 652 |||| | ||||||||||||||| Sbjct: 119436 atgctacctcctttcactgaaga 119414 Score = 151 bits (76), Expect = 4e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 348 ttgtgtaggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaag 407 ||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 119804 ttgtgtaggtcagaaacaaccattagccgtctctgcaggattgccgccatgaagaggaag 119745 Query: 408 attgaacacatgccaaacatgacggtgatagggaaagcattcac 451 || |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 119744 atagaacacatgccaaacatgacagtgatagggaatgcattcac 119701 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 670 tggtggcaactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataac 729 ||||| |||| || |||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 119316 tggtgacaacaggaaggaaaagggtgaaggctgatattgtaaacacgatctgcatataac 119257 Query: 730 ct 731 || Sbjct: 119256 ct 119255
>gb|AY106971.1| Zea mays PCO062071 mRNA sequence Length = 570 Score = 214 bits (108), Expect = 3e-52 Identities = 204/236 (86%) Strand = Plus / Minus Query: 294 taaggatttagcggctcgtcttccccggtcatctcttgtgattttgtcgagagcttgtgt 353 ||||||||||| ||||| ||||||||| |||| ||||||| ||| || || ||||||| Sbjct: 250 taaggatttagtggctcatcttccccgatcatttcttgtgctttagttgatgacttgtgt 191 Query: 354 aggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaa 413 || || | ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 190 agatccgagacaaccatcagccgtctctgcaagattgctgccatgaagaggaagatagaa 131 Query: 414 cacatgccaaacatgacggtgatagggaaagcattcacattgtagagcaccacacacaca 473 ||||| || |||||||| ||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 130 cacatcccgaacatgacagtgatagggaatgcgttcacattgtaaagcaccacacaaaca 71 Query: 474 aacaggttcagtggtatgcggaagaagttcatgatggtgctccttgcctcctcagg 529 || | ||| || || ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct: 70 aataagttgagcgggatgcggaagaaattcatgattgtgcttcttgcttcctcagg 15
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 200 bits (101), Expect = 5e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 32280 acattgtaaagaaccacacaaacaaacaggttgagtggtatgcggaagaagttcatgatc 32221 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 32220 gtgcttcttgcctcctcaggaatatactgggacctcatcttcatgattgatggccagaaa 32161 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctg 610 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 32160 atgccaacacaggattcaaatatacagaaaccgagcagctg 32120 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 32494 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 32435 Query: 423 aacatgacggtgatagggaaagcattcac 451 |||||||| ||||| ||||| |||||||| Sbjct: 32434 aacatgacagtgatggggaatgcattcac 32406 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 31972 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 31917
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 200 bits (101), Expect = 5e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 19575089 acattgtaaagaaccacacaaacaaacaggttgagtggtatgcggaagaagttcatgatc 19575030 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 19575029 gtgcttcttgcctcctcaggaatatactgggacctcatcttcatgattgatggccagaaa 19574970 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctg 610 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 19574969 atgccaacacaggattcaaatatacagaaaccgagcagctg 19574929 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 19575303 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 19575244 Query: 423 aacatgacggtgatagggaaagcattcac 451 |||||||| ||||| ||||| |||||||| Sbjct: 19575243 aacatgacagtgatggggaatgcattcac 19575215 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 19574781 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 19574726
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 200 bits (101), Expect = 5e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 450 acattgtagagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatg 509 |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 19586365 acattgtaaagaaccacacaaacaaacaggttgagtggtatgcggaagaagttcatgatc 19586306 Query: 510 gtgctccttgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaa 569 ||||| |||||||||||||| |||||||| || |||||||||||||| |||||||||||| Sbjct: 19586305 gtgcttcttgcctcctcaggaatatactgggacctcatcttcatgattgatggccagaaa 19586246 Query: 570 atgccaacacatgactcaaaggtacagaaaccaagcagctg 610 ||||||||||| || ||||| |||||||||| |||||||| Sbjct: 19586245 atgccaacacaggattcaaatatacagaaaccgagcagctg 19586205 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 363 acaaccatcagccgtctctgcaagattgccgccatgaagaggaagattgaacacatgcca 422 |||||||||||||| |||||||||||||| |||||||| ||||| || | |||||||||| Sbjct: 19586579 acaaccatcagccgcctctgcaagattgctgccatgaaaaggaaaatagcacacatgcca 19586520 Query: 423 aacatgacggtgatagggaaagcattcac 451 |||||||| ||||| ||||| |||||||| Sbjct: 19586519 aacatgacagtgatggggaatgcattcac 19586491 Score = 48.1 bits (24), Expect = 0.041 Identities = 48/56 (85%) Strand = Plus / Minus Query: 676 caactgggaggaaaagggtgaaggctgatactgcaaacacgatctgcatataacct 731 |||| ||||||||||| || || ||||||| | |||||| ||||||||||||||| Sbjct: 19586057 caacagggaggaaaagagtaaaagctgatatcgaaaacacaatctgcatataacct 19586002
>emb|AJ843130.1| Plantago major partial mRNA for putative transport protein (putative transporter gene) Length = 942 Score = 123 bits (62), Expect = 9e-25 Identities = 152/182 (83%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 |||||||||||||| ||||| |||||||||| || || ||||| || || |||||||| Sbjct: 426 aagaggaagattgagcacataccaaacatgattgttattgggaatgcgttaacattgtat 367 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 ||||| | || ||||| | ||| || || |||||||||||||||||||| ||||| | Sbjct: 366 agcacgatgcaaacaaagatgttgagagggatgcggaagaagttcatgatagtgcttcgc 307 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggccagaaaatgccaaca 578 ||||||||||||||||| || || ||||||||||| || ||||||||||| || |||||| Sbjct: 306 gcctcctcagggatatattgggacctcatcttcataatggatggccagaagatcccaaca 247 Query: 579 ca 580 || Sbjct: 246 ca 245
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 348 ttgtgtaggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaag 407 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 33556584 ttgtgtaggtcataaacaaccattagccgtctctgcaggattgccgccatgaagacaaac 33556525 Query: 408 attgaacacatgccaaacatgacggtgatagggaa 442 || |||||||||||||||||||| ||||||||||| Sbjct: 33556524 atagaacacatgccaaacatgacagtgatagggaa 33556490
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 348 ttgtgtaggtcagccacaaccatcagccgtctctgcaagattgccgccatgaagaggaag 407 |||||||||||| |||||||| ||||||||||||| ||||||||||||||||| || Sbjct: 132873 ttgtgtaggtcataaacaaccattagccgtctctgcaggattgccgccatgaagacaaac 132814 Query: 408 attgaacacatgccaaacatgacggtgatagggaa 442 || |||||||||||||||||||| ||||||||||| Sbjct: 132813 atagaacacatgccaaacatgacagtgatagggaa 132779
>ref|NM_118911.2| Arabidopsis thaliana unknown protein AT4G27720 mRNA, complete cds Length = 1759 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1354 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1295 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1294 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1235 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1234 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1188
>gb|AF419573.1|AF419573 Arabidopsis thaliana AT4g27720/T29A15_210 mRNA, complete cds Length = 1698 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1354 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1295 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1294 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1235 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1234 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1188
>gb|AY056408.1| Arabidopsis thaliana AT4g27720/T29A15_210 mRNA, complete cds Length = 1759 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1354 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1295 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1294 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1235 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1234 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1188
>gb|AF325107.1|AF325107 Arabidopsis thaliana putative protein (T29A15.210) mRNA, complete cds Length = 1383 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1271 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1212 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1211 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1152 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1151 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1105
>emb|BX826355.1|CNS0A3A0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1336 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1277 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1276 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1217 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1216 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1170
>gb|AY084621.1| Arabidopsis thaliana clone 113484 mRNA, complete sequence Length = 1698 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1354 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1295 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1294 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1235 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1234 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1188
>gb|BT003023.1| Arabidopsis thaliana At4g27720/T29A15_210 gene, complete cds Length = 1383 Score = 93.7 bits (47), Expect = 8e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgtag 458 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1271 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatttacattgtac 1212 Query: 459 agcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcctt 518 | || || || ||||| | ||||| || |||||||| |||||||| || ||||| || Sbjct: 1211 aatacaacgcagacaaagatattcagaggaatgcggaaaaagttcattattgtgcttctg 1152 Query: 519 gcctcctcagggatatactgagatctcatcttcatgatagatggcca 565 || || || ||||| || || |||||||||||||| || |||||||| Sbjct: 1151 gcttcttctgggatgtattgggatctcatcttcattatggatggcca 1105
>ref|NM_114791.3| Arabidopsis thaliana unknown protein AT3G49310 mRNA, complete cds Length = 1664 Score = 81.8 bits (41), Expect = 3e-12 Identities = 170/213 (79%) Strand = Plus / Minus Query: 398 gaagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgta 457 ||||||||||||||| ||||| |||||||||| ||||| || || || | ||| ||||| Sbjct: 1333 gaagaggaagattgagcacataccaaacatgattgtgatcggaaatgcgtccacgttgta 1274 Query: 458 gagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcct 517 | || | || ||||| | ||| ||||| | |||||||| ||||| |||||||| | Sbjct: 1273 caagacgatgcagacaaagatgttgagtggaacacggaagaaattcattatggtgcttcg 1214 Query: 518 tgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaaatgccaac 577 ||| || ||||| |||||||| || ||||||||||| || || ||||| || || || || Sbjct: 1213 tgcttcttcaggtatatactgcgacctcatcttcattatcgaaggccaaaatattccgac 1154 Query: 578 acatgactcaaaggtacagaaaccaagcagctg 610 ||| |||||||| |||||||||||||||||| Sbjct: 1153 acaagactcaaaaacacagaaaccaagcagctg 1121
>gb|BT012543.1| Arabidopsis thaliana At3g49310 gene, complete cds Length = 1383 Score = 81.8 bits (41), Expect = 3e-12 Identities = 170/213 (79%) Strand = Plus / Minus Query: 398 gaagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgta 457 ||||||||||||||| ||||| |||||||||| ||||| || || || | ||| ||||| Sbjct: 1272 gaagaggaagattgagcacataccaaacatgattgtgatcggaaatgcgtccacgttgta 1213 Query: 458 gagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcct 517 | || | || ||||| | ||| ||||| | |||||||| ||||| |||||||| | Sbjct: 1212 caagacgatgcagacaaagatgttgagtggaacacggaagaaattcattatggtgcttcg 1153 Query: 518 tgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaaatgccaac 577 ||| || ||||| |||||||| || ||||||||||| || || ||||| || || || || Sbjct: 1152 tgcttcttcaggtatatactgcgacctcatcttcattatcgaaggccaaaatattccgac 1093 Query: 578 acatgactcaaaggtacagaaaccaagcagctg 610 ||| |||||||| |||||||||||||||||| Sbjct: 1092 acaagactcaaaaacacagaaaccaagcagctg 1060
>gb|BT011238.1| Arabidopsis thaliana At3g49310 gene, complete cds Length = 1534 Score = 81.8 bits (41), Expect = 3e-12 Identities = 170/213 (79%) Strand = Plus / Minus Query: 398 gaagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgta 457 ||||||||||||||| ||||| |||||||||| ||||| || || || | ||| ||||| Sbjct: 1298 gaagaggaagattgagcacataccaaacatgattgtgatcggaaatgcgtccacgttgta 1239 Query: 458 gagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcct 517 | || | || ||||| | ||| ||||| | |||||||| ||||| |||||||| | Sbjct: 1238 caagacgatgcagacaaagatgttgagtggaacacggaagaaattcattatggtgcttcg 1179 Query: 518 tgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaaatgccaac 577 ||| || ||||| |||||||| || ||||||||||| || || ||||| || || || || Sbjct: 1178 tgcttcttcaggtatatactgcgacctcatcttcattatcgaaggccaaaatattccgac 1119 Query: 578 acatgactcaaaggtacagaaaccaagcagctg 610 ||| |||||||| |||||||||||||||||| Sbjct: 1118 acaagactcaaaaacacagaaaccaagcagctg 1086
>ref|NM_105140.2| Arabidopsis thaliana unknown protein AT1G64650 mRNA, complete cds Length = 1755 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 1246 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 1187 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 1186 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 1128
>gb|BT012268.1| Arabidopsis thaliana At1g64650 gene, complete cds Length = 1389 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 1187 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 1128 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 1127 ctcatcttcattatagatggccagaagatccctacacacgcttcaaatgtgcagaaacc 1069
>gb|BT011624.1| Arabidopsis thaliana At1g64650 mRNA, complete cds Length = 1601 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 1233 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 1174 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 1173 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 1115
>emb|AL132956.2|ATF2K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F2K15 Length = 129757 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 492 cggaagaagttcatgatggtgctccttgcctcctcagggatatactgagatctcatcttc 551 |||||||| ||||| |||||||| | ||| || ||||| |||||||| || ||||||||| Sbjct: 88186 cggaagaaattcattatggtgcttcgtgcttcttcaggtatatactgcgacctcatcttc 88245 Query: 552 atgatagatggccagaaaatgccaacacatgactcaaaggtacagaaaccaagcagctg 610 || || || ||||| || || || ||||| |||||||| |||||||||||||||||| Sbjct: 88246 attatcgaaggccaaaatattccgacacaagactcaaaaacacagaaaccaagcagctg 88304 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 398 gaagaggaagattgaacacatgccaaacatga 429 ||||||||||||||| ||||| |||||||||| Sbjct: 88014 gaagaggaagattgagcacataccaaacatga 88045
>emb|BX815264.1|CNS0ACZ6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1676 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 1202 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 1143 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 1142 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 1084
>emb|BX818558.1|CNS0ACHO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL85ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 302 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 243 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 242 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 184
>emb|BX817883.1|CNS0ACJH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 580 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 185 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 126 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 125 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 67
>gb|AC012329.5|AC012329 Arabidopsis thaliana chromosome 1 BAC T1G12 genomic sequence, complete sequence Length = 80367 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 492 cggaagaagttcatgatggtgctccttgcctcctcagggatatactgagatctcatcttc 551 |||||||| ||||| |||||||| | ||| || ||||| |||||||| || ||||||||| Sbjct: 6318 cggaagaaattcattatggtgcttcgtgcttcttcaggtatatactgcgacctcatcttc 6377 Query: 552 atgatagatggccagaaaatgccaacacatgactcaaaggtacagaaaccaagcagctg 610 || || || ||||| || || || ||||| |||||||| |||||||||||||||||| Sbjct: 6378 attatcgaaggccaaaatattccgacacaagactcaaaaacacagaaaccaagcagctg 6436 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 398 gaagaggaagattgaacacatgccaaacatga 429 ||||||||||||||| ||||| |||||||||| Sbjct: 6146 gaagaggaagattgagcacataccaaacatga 6177
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 77.8 bits (39), Expect = 5e-11 Identities = 99/119 (83%) Strand = Plus / Plus Query: 483 agtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactgagat 542 ||||| |||||||| || |||||||||||||| || || ||||| || || || || ||| Sbjct: 93001 agtgggatgcggaaaaaattcatgatggtgcttctagcttcctctggaatgtattgcgat 93060 Query: 543 ctcatcttcatgatagatggccagaaaatgccaacacatgactcaaaggtacagaaacc 601 ||||||||||| |||||||||||||| || || ||||| | ||||| || |||||||| Sbjct: 93061 ctcatcttcattatagatggccagaagattcctacacacgcttcaaatgtgcagaaacc 93119
>emb|BX823394.1|CNS0A7VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZE06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1689 Score = 73.8 bits (37), Expect = 7e-10 Identities = 169/213 (79%) Strand = Plus / Minus Query: 398 gaagaggaagattgaacacatgccaaacatgacggtgatagggaaagcattcacattgta 457 ||||||||||||||| ||||| |||||||||| ||||| || || || | ||| ||||| Sbjct: 1353 gaagaggaagattgagcacataccaaacatgattgtgatcggaaatgcgtccacgttgta 1294 Query: 458 gagcaccacacacacaaacaggttcagtggtatgcggaagaagttcatgatggtgctcct 517 | || | || ||||| | ||| ||||| | ||||| || ||||| |||||||| | Sbjct: 1293 caagacgatgcagacaaagatgttgagtggaacacggaaaaaattcattatggtgcttcg 1234 Query: 518 tgcctcctcagggatatactgagatctcatcttcatgatagatggccagaaaatgccaac 577 ||| || ||||| |||||||| || ||||||||||| || || ||||| || || || || Sbjct: 1233 tgcttcttcaggtatatactgcgacctcatcttcattatcgaaggccaaaatattccgac 1174 Query: 578 acatgactcaaaggtacagaaaccaagcagctg 610 ||| |||||||| |||||||||||||||||| Sbjct: 1173 acaagactcaaaaacacagaaaccaagcagctg 1141
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcatt 448 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 143800 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatt 143751 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 480 ttcagtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactga 539 ||||| || |||||||| |||||||| || ||||| || || || || ||||| || || Sbjct: 143620 ttcagaggaatgcggaaaaagttcattattgtgcttctggcttcttctgggatgtattgg 143561 Query: 540 gatctcatcttcatgatagatggcca 565 |||||||||||||| || |||||||| Sbjct: 143560 gatctcatcttcattatggatggcca 143535
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 399 aagaggaagattgaacacatgccaaacatgacggtgatagggaaagcatt 448 ||||||||||| || ||||| ||||||||||| ||||||||||| ||||| Sbjct: 83090 aagaggaagatcgagcacattccaaacatgaccgtgatagggaatgcatt 83041 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Minus Query: 480 ttcagtggtatgcggaagaagttcatgatggtgctccttgcctcctcagggatatactga 539 ||||| || |||||||| |||||||| || ||||| || || || || ||||| || || Sbjct: 82910 ttcagaggaatgcggaaaaagttcattattgtgcttctggcttcttctgggatgtattgg 82851 Query: 540 gatctcatcttcatgatagatggcca 565 |||||||||||||| || |||||||| Sbjct: 82850 gatctcatcttcattatggatggcca 82825
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gtaataataatatatgtatag 31 ||||||||||||||||||||| Sbjct: 34865 gtaataataatatatgtatag 34885
>gb|AC006372.2| Homo sapiens BAC clone RP11-331D5 from 7, complete sequence Length = 190846 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 669 ctggtggcaactgggaggaaa 689 ||||||||||||||||||||| Sbjct: 83931 ctggtggcaactgggaggaaa 83951
>gb|AC093655.4| Homo sapiens BAC clone RP11-424F6 from 7, complete sequence Length = 119721 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 aaaagcatcttgctttccccacttc 216 ||||||||||||||||| ||||||| Sbjct: 91183 aaaagcatcttgctttcgccacttc 91159
>gb|AC073216.7| Homo sapiens BAC clone RP11-521C10 from 7, complete sequence Length = 113530 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 aaaagcatcttgctttccccacttc 216 ||||||||||||||||| ||||||| Sbjct: 84741 aaaagcatcttgctttcgccacttc 84717
>ref|NM_019244.1| Rattus norvegicus branched chain ketoacid dehydrogenase kinase (Bckdk), mRNA Length = 2241 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagctgcagggagccaccga 624 ||||||||||||||||||||| Sbjct: 1280 gcagctgcagggagccaccga 1260
>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete sequence Length = 236130 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 464 cacacacacaaacaggttcag 484 ||||||||||||||||||||| Sbjct: 44347 cacacacacaaacaggttcag 44367
>gb|AC079774.4| Homo sapiens BAC clone RP11-288A13 from 4, complete sequence Length = 98874 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 tgtaataataatatatgtata 30 ||||||||||||||||||||| Sbjct: 60735 tgtaataataatatatgtata 60755
>gb|AC159107.2| Pan troglodytes BAC clone CH251-567D12 from chromosome unknown, complete sequence Length = 198786 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 aaaggtacagaaaccaagcag 607 ||||||||||||||||||||| Sbjct: 29686 aaaggtacagaaaccaagcag 29706
>ref|XM_579427.1| PREDICTED: Rattus norvegicus branched chain keto acid dehydrogenase kinase (Bckdk), mRNA Length = 2248 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagctgcagggagccaccga 624 ||||||||||||||||||||| Sbjct: 1280 gcagctgcagggagccaccga 1260
>dbj|BS000187.1| Pan troglodytes chromosome 22 clone:PTB-037I20, map 22, partial sequences, complete sequence Length = 45529 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aaaggtacagaaaccaagcag 607 ||||||||||||||||||||| Sbjct: 13827 aaaggtacagaaaccaagcag 13807
>emb|AL132715.3|CNS01DTE Human chromosome 14 DNA sequence BAC R-368E9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 199335 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gtgtaataataatatatgtat 29 ||||||||||||||||||||| Sbjct: 67718 gtgtaataataatatatgtat 67698
>dbj|AP001719.1| Homo sapiens genomic DNA, chromosome 21q, section 63/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aaaggtacagaaaccaagcag 607 ||||||||||||||||||||| Sbjct: 109278 aaaggtacagaaaccaagcag 109258
>dbj|AP000316.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMP21-S185, complete sequence Length = 24518 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aaaggtacagaaaccaagcag 607 ||||||||||||||||||||| Sbjct: 12396 aaaggtacagaaaccaagcag 12376
>gb|U27456.1|RNU27456 Rattus norvegicus branched-chain alpha-ketoacid dehydrogenase kinase (BCKDHKIN) mRNA, partial cds Length = 1149 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagctgcagggagccaccga 624 ||||||||||||||||||||| Sbjct: 1069 gcagctgcagggagccaccga 1049
>gb|M93271.1|RATBK Rattus norvegicus branched-chain alpha-ketoacid dehydrogenasekinase (BCKDHKIN) mRNA, complete cds Length = 2241 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagctgcagggagccaccga 624 ||||||||||||||||||||| Sbjct: 1280 gcagctgcagggagccaccga 1260
>dbj|AP000165.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 1/9, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 aaaggtacagaaaccaagcag 607 ||||||||||||||||||||| Sbjct: 80037 aaaggtacagaaaccaagcag 80017 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,533,606 Number of Sequences: 3902068 Number of extensions: 9533606 Number of successful extensions: 237765 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 237406 Number of HSP's gapped (non-prelim): 342 length of query: 731 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 708 effective length of database: 17,143,297,704 effective search space: 12137454774432 effective search space used: 12137454774432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)