| Clone Name | rbags9d11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 474 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 530 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 16194062 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 16194118
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 474 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 530 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 18954 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 19010
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 474 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 530 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 98855 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 98911
>dbj|AK120065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B12, full insert sequence Length = 5191 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 474 agcagctaaacctttcaccgcaaagaaggccccgtaagtgaaacaaataccccaagt 530 ||||||||| ||||| || |||||||| | ||| ||||||||||| ||||||||||| Sbjct: 2772 agcagctaatccttttacagcaaagaatgtcccataagtgaaacatataccccaagt 2716
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 202 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 261 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 22659 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 22718 Query: 262 agtggc 267 |||||| Sbjct: 22719 agtggc 22724 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 359 cctcggtttcaatggaaagatagctttcgccccatccacctgtactctgttgtttggaca 418 ||||||||||| | ||||| || | || ||||||||||||||||| ||||||| |||| Sbjct: 28393 cctcggtttcacttgaaaggtatgtctctccccatccacctgtactaagttgttttgaca 28452 Query: 419 a 419 | Sbjct: 28453 a 28453 Score = 40.1 bits (20), Expect = 9.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgttctcaatgtatgtagcagcattttttatacatttttctatc 603 |||| ||| ||||||||||||||||| | | | ||||||||| ||||||||| | ||| Sbjct: 28663 ccatccttcctttgtttgttctcaataaacttggaagcatttttaatacattttccaatc 28722 Query: 604 tctt 607 |||| Sbjct: 28723 tctt 28726 Score = 40.1 bits (20), Expect = 9.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 451 ctattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgtaa 510 ||||| ||||| || ||||| | |||| |||| ||||| | |||||||| | || ||| Sbjct: 28485 ctattttcatatgttcttccagcagcaactaatccttttatggcaaagaatgttccataa 28544 Query: 511 gtgaaacaaataccccaagt 530 |||||||| ||||||||||| Sbjct: 28545 gtgaaacatataccccaagt 28564
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 202 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 261 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 98103 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 98162 Query: 262 agtggc 267 |||||| Sbjct: 98163 agtggc 98168
>gb|AY618699.1| Avena strigosa strain CI3815 beta-amyrin synthase gene, complete cds Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 190 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 239 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119 Score = 40.1 bits (20), Expect = 9.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 630 ctctttgaacaatatcagaccctcaagcacggatgatgtgcattccatagatggat 685 |||||| || ||||| ||| | |||| ||| |||||||||||||| | |||||||| Sbjct: 1728 ctctttaaataatatgagagcatcaaccacagatgatgtgcattcaacagatggat 1673
>gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthase gene, complete cds Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 190 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 239 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119 Score = 40.1 bits (20), Expect = 9.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 630 ctctttgaacaatatcagaccctcaagcacggatgatgtgcattccatagatggat 685 |||||| || ||||| ||| | |||| ||| |||||||||||||| | |||||||| Sbjct: 1728 ctctttaaataatatgagagcatcaaccacagatgatgtgcattcaacagatggat 1673
>emb|AJ311789.1|AST311789 Avena strigosa mRNA for beta-amyrin synthase (bAS1 gene) Length = 2274 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 190 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 239 |||||||||||||||||||| || || || | ||||||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttctagctgcatattcat 2119 Score = 40.1 bits (20), Expect = 9.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 630 ctctttgaacaatatcagaccctcaagcacggatgatgtgcattccatagatggat 685 |||||| || ||||| ||| | |||| ||| |||||||||||||| | |||||||| Sbjct: 1728 ctctttaaataatatgagagcatcaaccacagatgatgtgcattcaacagatggat 1673
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 202 tgttggggaaactctcccgagtctagctgcatattcatcaatagttttgccgcacgatat 261 ||||| |||||||| |||| ||||| |||||||| |||||| |||||| ||| ||||| Sbjct: 8301615 tgttgtggaaactcgcccgtttctagttgcatattaatcaattcttttgctgcatgatat 8301674 Query: 262 agtggc 267 |||||| Sbjct: 8301675 agtggc 8301680 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 359 cctcggtttcaatggaaagatagctttcgccccatccacctgtactctgttgtttggaca 418 ||||||||||| | ||||| || | || ||||||||||||||||| ||||||| |||| Sbjct: 8307349 cctcggtttcacttgaaaggtatgtctctccccatccacctgtactaagttgttttgaca 8307408 Query: 419 a 419 | Sbjct: 8307409 a 8307409 Score = 40.1 bits (20), Expect = 9.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgttctcaatgtatgtagcagcattttttatacatttttctatc 603 |||| ||| ||||||||||||||||| | | | ||||||||| ||||||||| | ||| Sbjct: 8307619 ccatccttcctttgtttgttctcaataaacttggaagcatttttaatacattttccaatc 8307678 Query: 604 tctt 607 |||| Sbjct: 8307679 tctt 8307682 Score = 40.1 bits (20), Expect = 9.8 Identities = 65/80 (81%) Strand = Plus / Plus Query: 451 ctattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgtaa 510 ||||| ||||| || ||||| | |||| |||| ||||| | |||||||| | || ||| Sbjct: 8307441 ctattttcatatgttcttccagcagcaactaatccttttatggcaaagaatgttccataa 8307500 Query: 511 gtgaaacaaataccccaagt 530 |||||||| ||||||||||| Sbjct: 8307501 gtgaaacatataccccaagt 8307520
>ref|XM_949259.1| Theileria annulata strain Ankara DNA polymerase I (TA20960) partial mRNA Length = 5361 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 gtttatcttcatcgactttgatt 95 ||||||||||||||||||||||| Sbjct: 4261 gtttatcttcatcgactttgatt 4239
>gb|AF216755.1|AF216755 Abies magnifica cycloartenol synthase (CAS1) mRNA, complete cds Length = 3057 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 282 agcctggccagcataaatcaatgcaagcattgcccatgc 320 |||||||||||||||||| | |||||||| |||||||| Sbjct: 2581 agcctggccagcataaataagagcaagcatagcccatgc 2543
>dbj|AB055510.1| Betula platyphylla CASBPX2 mRNA for cycloartenol synthase, complete cds Length = 2514 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 505 ccgtaagtgaaacaaataccccaagtgccataccaagaaccat 547 ||||||||||| |||| |||||||| |||||||| ||||||| Sbjct: 2011 ccgtaagtgaagcaaacaccccaagaaccataccatgaaccat 1969
>ref|XM_629943.1| Dictyostelium discoideum hypothetical protein (DDB0185173), partial mRNA Length = 7611 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 tattgcggtagttgggatagtt 164 |||||||||||||||||||||| Sbjct: 7294 tattgcggtagttgggatagtt 7315
>gb|AY618700.1| Avena ventricosa strain CAV2835 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 70/86 (81%) Strand = Plus / Minus Query: 373 gaaagatagctttcgccccatccacctgtactctgttgtttggacaataaaaattcacat 432 ||||||||| ||| ||||||||||||||| | ||||| || || || | ||||| ||| Sbjct: 1985 gaaagatagtcttcaccccatccacctgtagtttgttgctttgataagataaatttgcat 1926 Query: 433 gatttcctcatacaatcactattatc 458 |||||||| ||| || ||| |||||| Sbjct: 1925 gatttcctgatagaagcacaattatc 1900 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 514 aaacaaataccccaagtgccataccaagaaccat 547 |||||||||||||| | ||||||||| ||||||| Sbjct: 1844 aaacaaataccccatgagccataccatgaaccat 1811 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 652 tcaagcacggatgatgtgcattccatagatggat 685 |||||||| |||||||||||||| | |||||||| Sbjct: 1706 tcaagcacagatgatgtgcattcaacagatggat 1673
>gb|AY618697.1| Avena longiglumis strain CC7250 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 190 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 239 |||||||||||||||||||| || || || | || |||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttcaagctgcatattcat 2119 Score = 40.1 bits (20), Expect = 9.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 630 ctctttgaacaatatcagaccctcaagcacggatgatgtgcattccatagatggat 685 |||||| || ||||| ||| | |||| ||| |||||||||||||| | |||||||| Sbjct: 1728 ctctttaaataatatgagagcatcaaccacagatgatgtgcattcaacagatggat 1673
>gb|AY618696.1| Avena longiglumis strain CC4719 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 190 cccatgtgttcctgttggggaaactctcccgagtctagctgcatattcat 239 |||||||||||||||||||| || || || | || |||||||||||||| Sbjct: 2168 cccatgtgttcctgttgggggaagtcacctgtttcaagctgcatattcat 2119 Score = 40.1 bits (20), Expect = 9.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 630 ctctttgaacaatatcagaccctcaagcacggatgatgtgcattccatagatggat 685 |||||| || ||||| ||| | |||| ||| |||||||||||||| | |||||||| Sbjct: 1728 ctctttaaataatatgagagcatcaaccacagatgatgtgcattcaacagatggat 1673
>gb|AY618695.1| Avena clauda strain CAV5566/1 beta-amyrin synthase gene, complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 514 aaacaaataccccaagtgccataccaagaaccat 547 |||||||||||||| | ||||||||| ||||||| Sbjct: 1844 aaacaaataccccatgagccataccatgaaccat 1811 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 652 tcaagcacggatgatgtgcattccatagatggat 685 |||||||| |||||||||||||| | |||||||| Sbjct: 1706 tcaagcacagatgatgtgcattcaacagatggat 1673
>ref|XM_451982.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B10175g predicted mRNA Length = 2196 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 515 aacaaataccccaagtgccataccaagaaccatt 548 |||||||||||||| ||| |||||||||||||| Sbjct: 1771 aacaaataccccaacagccgtaccaagaaccatt 1738
>gb|AC161884.5| Mus musculus BAC clone RP23-77K23 from chromosome 14, complete sequence Length = 243730 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 585 ttttatacatttttctatctct 606 |||||||||||||||||||||| Sbjct: 22690 ttttatacatttttctatctct 22669
>gb|AC115741.9| Mus musculus chromosome 14, clone RP23-476L2, complete sequence Length = 188141 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 585 ttttatacatttttctatctct 606 |||||||||||||||||||||| Sbjct: 99961 ttttatacatttttctatctct 99982
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 515 aacaaataccccaagtgccataccaagaaccatt 548 |||||||||||||| ||| |||||||||||||| Sbjct: 891308 aacaaataccccaacagccgtaccaagaaccatt 891275
>emb|AJ534950.1|DDI534950 Dictyostelium discoideum mRNA for NAD(+) ADP-ribosyltransferase-3 (adprt-3 gene) Length = 7649 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 tattgcggtagttgggatagtt 164 |||||||||||||||||||||| Sbjct: 7303 tattgcggtagttgggatagtt 7324
>gb|AC093849.2| Homo sapiens BAC clone RP11-489G11 from 4, complete sequence Length = 156195 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 316 catgcagtggccactgcatgag 337 |||||||||||||||||||||| Sbjct: 20698 catgcagtggccactgcatgag 20677 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 catgcagtggccactgcatga 336 ||||||||||||||||||||| Sbjct: 20679 catgcagtggccactgcatga 20699
>gb|AC154469.3| Mus musculus BAC clone RP24-158M15 from chromosome 17, complete sequence Length = 151047 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 417 caataaaaattcacatgatttc 438 |||||||||||||||||||||| Sbjct: 82208 caataaaaattcacatgatttc 82187
>dbj|AK106822.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E04, full insert sequence Length = 1720 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 195 gtgttcctgttggggaaactctcccgagtctagctgcatatt 236 |||||| ||||||||||||||||| | |||| ||||||||| Sbjct: 1361 gtgttcttgttggggaaactctcctgtttctaactgcatatt 1320 Score = 44.1 bits (22), Expect = 0.63 Identities = 79/98 (80%) Strand = Plus / Minus Query: 450 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 509 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 1064 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 1005 Query: 510 agtgaaacaaataccccaagtgccataccaagaaccat 547 ||||| || | |||||||||||| |||| ||||||| Sbjct: 1004 ggtgaagcatacaccccaagtgcctaaccatgaaccat 967
>dbj|AK070534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062I08, full insert sequence Length = 2514 Score = 44.1 bits (22), Expect = 0.63 Identities = 64/78 (82%) Strand = Plus / Minus Query: 493 gcaaagaaggccccgtaagtgaaacaaataccccaagtgccataccaagaaccattcttt 552 |||||||| ||||| || || || || |||||||| || |||||||| || |||| ||| Sbjct: 1942 gcaaagaatgccccataggtaaagcatataccccatgtcccataccatgagccatcattt 1883 Query: 553 ctttgtttgttctcaatg 570 |||||||||||||||| Sbjct: 1882 tgttgtttgttctcaatg 1865
>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete sequence Length = 191390 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 417 caataaaaattcacatgatttc 438 |||||||||||||||||||||| Sbjct: 124576 caataaaaattcacatgatttc 124597
>emb|AL670882.5| Mouse DNA sequence from clone RP23-286G19 on chromosome X, complete sequence Length = 194517 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 227 gctgcatattcatcaatagttt 248 |||||||||||||||||||||| Sbjct: 37522 gctgcatattcatcaatagttt 37501
>gb|AC167246.2| Mus musculus BAC clone RP23-401H11 from chromosome 9, complete sequence Length = 160140 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 ctcccgagtctagctgcatat 235 ||||||||||||||||||||| Sbjct: 88357 ctcccgagtctagctgcatat 88377
>gb|AF521015.1| Rhizobium vitis strain F2/5 partial genomic sequence Length = 36567 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 tcaatggaaagatagctttcg 387 ||||||||||||||||||||| Sbjct: 25561 tcaatggaaagatagctttcg 25541
>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence Length = 176328 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 tgtatgtagcagcatttttta 589 ||||||||||||||||||||| Sbjct: 115147 tgtatgtagcagcatttttta 115127
>emb|AL590556.20| Human DNA sequence from clone RP11-26H16 on chromosome 1 Contains a ribosomal protein L21 (RPL21) pseudogene, the 5' end of the HSPG2 gene for heparan sulfate proteoglycan 2 (perlecan), the ELA3B gene for elastase 3B (pancreatic) and the ELA3A gene for elastase 3A (pancreatic (protease E)), complete sequence Length = 118495 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 ttgtttggacaataaaaattc 428 ||||||||||||||||||||| Sbjct: 33597 ttgtttggacaataaaaattc 33577
>gb|AC144710.2| Danio rerio clone CH211-215E4, complete sequence Length = 193226 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 695 caatattctgaaaactgtcag 715 ||||||||||||||||||||| Sbjct: 172687 caatattctgaaaactgtcag 172707
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119730 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 576 agcagcattttttatacattt 596 ||||||||||||||||||||| Sbjct: 61173 agcagcattttttatacattt 61193
>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete sequence Length = 216373 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 695 caatattctgaaaactgtcag 715 ||||||||||||||||||||| Sbjct: 124983 caatattctgaaaactgtcag 124963
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 agttgggatagttaaagaaaa 172 ||||||||||||||||||||| Sbjct: 2584404 agttgggatagttaaagaaaa 2584424
>dbj|AK068026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131K12, full insert sequence Length = 2558 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 511 gtgaaacaaataccccaagtgccataccaagaaccat 547 ||||||||||| ||||||| |||||||| ||||||| Sbjct: 1891 gtgaaacaaatcccccaagaaccataccatgaaccat 1855
>dbj|AK066327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062J12, full insert sequence Length = 2578 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 511 gtgaaacaaataccccaagtgccataccaagaaccat 547 ||||||||||| ||||||| |||||||| ||||||| Sbjct: 1946 gtgaaacaaatcccccaagaaccataccatgaaccat 1910
>emb|AL929334.12| Zebrafish DNA sequence from clone DKEY-24F15, complete sequence Length = 226833 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 gacacataatatactttgaaa 33 ||||||||||||||||||||| Sbjct: 75665 gacacataatatactttgaaa 75685
>ref|NM_105367.2| Arabidopsis thaliana lupeol synthase AT1G66960 mRNA, complete cds Length = 2639 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 1989 taagtgaaacaaatacccca 1970
>gb|AC169038.4| Mus musculus BAC clone RP23-31H24 from chromosome 14, complete sequence Length = 214689 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 atatagtggcactggatata 277 |||||||||||||||||||| Sbjct: 146432 atatagtggcactggatata 146451
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgtt 563 |||||||||||||||||||| Sbjct: 7392 ccattctttctttgtttgtt 7411
>gb|AC166095.3| Mus musculus BAC clone RP24-494O2 from chromosome 14, complete sequence Length = 155918 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 23020 tctagctgcatattcatcaa 23039
>gb|AC146316.3| Microcebus murinus clone CH257-437M14, complete sequence Length = 274705 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gatagctatgtttatcttca 83 |||||||||||||||||||| Sbjct: 86974 gatagctatgtttatcttca 86955
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcaatggaaagatagctttc 386 |||||||||||||||||||| Sbjct: 1713247 tcaatggaaagatagctttc 1713266
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cgataatgtggatattgctc 632 |||||||||||||||||||| Sbjct: 47849 cgataatgtggatattgctc 47868
>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 tgtatgtagcagcatttttt 588 |||||||||||||||||||| Sbjct: 19398 tgtatgtagcagcatttttt 19379
>gb|AY814613.1| Schistosoma japonicum SJCHGC01823 protein mRNA, complete cds Length = 1453 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 ttcctcatacaatcactattatca 459 ||||||||| |||||||||||||| Sbjct: 103 ttcctcatataatcactattatca 80
>gb|AC120153.11| Mus musculus chromosome 14, clone RP24-251C20, complete sequence Length = 182524 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 atatagtggcactggatata 277 |||||||||||||||||||| Sbjct: 111533 atatagtggcactggatata 111514
>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence Length = 162912 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cgataatgtggatattgctc 632 |||||||||||||||||||| Sbjct: 21260 cgataatgtggatattgctc 21279
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgtt 563 |||||||||||||||||||| Sbjct: 120696 ccattctttctttgtttgtt 120715
>emb|CR956399.4| M.truncatula DNA sequence from clone MTH2-7L7 on chromosome 3, complete sequence Length = 142604 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 agcattttttatacattttt 598 |||||||||||||||||||| Sbjct: 37689 agcattttttatacattttt 37670
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 15680 taagtgaaacaaatacccca 15699
>emb|X67810.1|SCSLU7A S.cerevisiae SLU7 gene Length = 1826 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 attttttatacatttttcta 601 |||||||||||||||||||| Sbjct: 38 attttttatacatttttcta 57
>gb|AC122533.4| Mus musculus BAC clone RP24-538L1 from chromosome 13, complete sequence Length = 159734 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tgtagcagcattttttatac 592 |||||||||||||||||||| Sbjct: 137114 tgtagcagcattttttatac 137133
>gb|AE014308.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 5 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ataccaagaaccattctttc 553 |||||||||||||||||||| Sbjct: 126925 ataccaagaaccattctttc 126906
>gb|AC117189.3| Mus musculus BAC clone RP23-44D2 from 8, complete sequence Length = 165254 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 ttttatacatttttctatct 604 |||||||||||||||||||| Sbjct: 69865 ttttatacatttttctatct 69884
>gb|AY223221.1| Schistosoma japonicum clone ZZD289 mRNA sequence Length = 1406 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 ttcctcatacaatcactattatca 459 ||||||||| |||||||||||||| Sbjct: 88 ttcctcatataatcactattatca 65
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence Length = 215747 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ataaaaattcacatgatttc 438 |||||||||||||||||||| Sbjct: 201787 ataaaaattcacatgatttc 201806
>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence Length = 201990 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 tgtatgtagcagcatttttt 588 |||||||||||||||||||| Sbjct: 152420 tgtatgtagcagcatttttt 152439
>gb|AC073269.7| Homo sapiens BAC clone RP11-436F9 from 7, complete sequence Length = 137889 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 acataatatactttgaaaca 35 |||||||||||||||||||| Sbjct: 67100 acataatatactttgaaaca 67119
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 149369 tctagctgcatattcatcaa 149350
>emb|CR933817.15| Mouse DNA sequence from clone DN-246G6 on chromosome 11, complete sequence Length = 218726 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 162897 tctagctgcatattcatcaa 162916
>emb|AL442645.8| Human DNA sequence from clone RP11-348N20 on chromosome 9 Contains the 3' end of a novel gene (KIAA1616) and a CpG island, complete sequence Length = 150684 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 agagccattatagggaaaat 143 |||||||||||||||||||| Sbjct: 33557 agagccattatagggaaaat 33576
>emb|AL161897.6| Human DNA sequence from clone RP11-262G14 on chromosome 13, complete sequence Length = 160455 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ataccaagaaccattctttc 553 |||||||||||||||||||| Sbjct: 14220 ataccaagaaccattctttc 14201
>emb|AL138930.15| Human DNA sequence from clone RP11-528G1 on chromosome 1 Contains the SLAMF6 gene for SLAM family member 6, the CD84 gene for CD84 antigen (leukocyte antigen), a novel gene and the 3' end of the SLAMF1 gene for signaling lymphocytic activation molecule family member 1, complete sequence Length = 175386 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atcaacaaaatagatagcta 71 |||||||||||||||||||| Sbjct: 87551 atcaacaaaatagatagcta 87532
>emb|AL135922.4| Human DNA sequence from clone RP5-875J13 on chromosome Xq22.1-22.3 Contains the 5' end of the gene for a novel protein, complete sequence Length = 61957 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 tatgtagcagcattttttat 590 |||||||||||||||||||| Sbjct: 48474 tatgtagcagcattttttat 48455
>emb|AL117336.22|HSA324I22 Human DNA sequence from clone RP11-324I22 on chromosome 10 Contains the 3' end of the CREM gene for cAMP responsive element modulator, the 5' end of the gene for cyclin fold protein 1 (CFP1) (CBCP1), two novel genes, a novel gene containing part of FLJ32718 and two CpG islands, complete sequence Length = 190690 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 561 gttctcaatgtatgtagcagcatt 584 |||||||||||| ||||||||||| Sbjct: 149828 gttctcaatgtaagtagcagcatt 149805
>emb|Z46796.1|SC8554 S.cerevisiae chromosome IV cosmid 8554 Length = 38760 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 attttttatacatttttcta 601 |||||||||||||||||||| Sbjct: 35837 attttttatacatttttcta 35818
>gb|BT000138.1| Arabidopsis thaliana Putative terpene synthase (At1g66960) mRNA, complete cds Length = 2348 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 1856 taagtgaaacaaatacccca 1837
>emb|X82086.1|SCCHROIV S.cerevisiae DNA for right arm of chromosome IV Length = 32821 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 attttttatacatttttcta 601 |||||||||||||||||||| Sbjct: 30195 attttttatacatttttcta 30176
>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7 Length = 349464 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 592 catttttctatctctttgca 611 |||||||||||||||||||| Sbjct: 328648 catttttctatctctttgca 328667
>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence Length = 215871 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 acatgatttcctcatacaat 448 |||||||||||||||||||| Sbjct: 9289 acatgatttcctcatacaat 9270
>gb|AC151342.2| Xenopus tropicalis clone ISB-364G13, complete sequence Length = 64991 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 616 taatgtggatattgctcttt 635 |||||||||||||||||||| Sbjct: 43942 taatgtggatattgctcttt 43961
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 cattttttatacatttttct 600 |||||||||||||||||||| Sbjct: 103274 cattttttatacatttttct 103255
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 ttctttctttgtttgttctc 566 |||||||||||||||||||| Sbjct: 48282 ttctttctttgtttgttctc 48263
>gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, complete sequence Length = 192886 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 ctctgttgtttggacaataaaaat 426 ||||||||||||||| |||||||| Sbjct: 78043 ctctgttgtttggaccataaaaat 78066
>gb|AC020701.8| Homo sapiens BAC clone RP11-200K10 from 4, complete sequence Length = 129572 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 661 gatgatgtgcattccataga 680 |||||||||||||||||||| Sbjct: 101030 gatgatgtgcattccataga 101049
>gb|AY062741.1| Arabidopsis thaliana Putative terpene synthase (At1g66960; F1O19.4) mRNA, complete cds Length = 2639 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 1989 taagtgaaacaaatacccca 1970
>gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chromosome 2, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 acatttttctatctctttgc 610 |||||||||||||||||||| Sbjct: 34469 acatttttctatctctttgc 34488
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 tgtagcagcattttttatac 592 |||||||||||||||||||| Sbjct: 17777 tgtagcagcattttttatac 17796
>gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, complete sequence Length = 134162 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ataaaaattcacatgatttc 438 |||||||||||||||||||| Sbjct: 64338 ataaaaattcacatgatttc 64357
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgttctca 567 ||||||||||||| |||||||||| Sbjct: 3016928 ccattctttctttctttgttctca 3016951
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence Length = 253824 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 170512 tctagctgcatattcatcaa 170493
>gb|AF338821.1|AF338821 Amazona farinosa cytochrome b gene, partial cds; tRNA-Thr gene, complete sequence; NADH6 pseudogene, complete sequence; tRNA-Glu pseudogene, complete sequence; tRNA-Pro gene, complete sequence; NADH dehydrogenase subunit 6 (NADH6) gene, complete cds; tRNA-Glu and tRNA-Phe genes, complete sequence; and 12S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 4709 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgtt 563 |||||||||||||||||||| Sbjct: 3963 ccattctttctttgtttgtt 3982 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ccattctttctttgtttgtt 563 |||||||||||||||||||| Sbjct: 1752 ccattctttctttgtttgtt 1771
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 acatgatttcctcatacaat 448 |||||||||||||||||||| Sbjct: 207843 acatgatttcctcatacaat 207862
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 ttttctatctctttgcatcg 614 |||||||||||||||||||| Sbjct: 24280355 ttttctatctctttgcatcg 24280374
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.8 Identities = 68/84 (80%) Strand = Plus / Plus Query: 450 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 509 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 2163780 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 2163839 Query: 510 agtgaaacaaataccccaagtgcc 533 ||||| || | |||||||||||| Sbjct: 2163840 ggtgaagcatacaccccaagtgcc 2163863
>gb|AE009469.1| Brucella melitensis 16M chromosome I, section 26 of 195 of the complete sequence Length = 11295 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcaatggaaagatagctttc 386 |||||||||||||||||||| Sbjct: 3460 tcaatggaaagatagctttc 3441
>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete sequence Length = 35116 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 241 taagtgaaacaaatacccca 222
>gb|AC023672.9| Homo sapiens BAC clone RP11-499I20 from 2, complete sequence Length = 127266 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 acatttttctatctctttgc 610 |||||||||||||||||||| Sbjct: 7780 acatttttctatctctttgc 7761
>gb|AC006369.3| Homo sapiens BAC clone RP11-278G12 from 2, complete sequence Length = 188359 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 gtgttcctgttggggaaactctcc 218 |||||||||||||| ||||||||| Sbjct: 100408 gtgttcctgttgggaaaactctcc 100385
>gb|AF489920.1| Arabidopsis thaliana 2,3-oxidosqualene-triterpene cyclase (At1g66960) mRNA, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 taagtgaaacaaatacccca 527 |||||||||||||||||||| Sbjct: 1856 taagtgaaacaaatacccca 1837
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcaatggaaagatagctttc 386 |||||||||||||||||||| Sbjct: 1730161 tcaatggaaagatagctttc 1730180
>gb|AC151354.2| Xenopus tropicalis clone ISB-50I7, complete sequence Length = 56590 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 616 taatgtggatattgctcttt 635 |||||||||||||||||||| Sbjct: 1155 taatgtggatattgctcttt 1136
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 40.1 bits (20), Expect = 9.8 Identities = 68/84 (80%) Strand = Plus / Plus Query: 450 actattatcataagtccttcccgaagcagctaaacctttcaccgcaaagaaggccccgta 509 |||||| ||||| || ||||| | |||| ||| ||||| || | |||||||||||| || Sbjct: 78473 actattctcatatgttcttccagcagcaattaacccttttactgaaaagaaggccccata 78532 Query: 510 agtgaaacaaataccccaagtgcc 533 ||||| || | |||||||||||| Sbjct: 78533 ggtgaagcatacaccccaagtgcc 78556
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 cattttttatacatttttct 600 |||||||||||||||||||| Sbjct: 25617 cattttttatacatttttct 25636
>gb|AC155274.2| Mus musculus BAC clone RP23-55F17 from 12, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaaactctcctagagccatt 132 |||||||||||||||||||| Sbjct: 35775 gaaactctcctagagccatt 35794
>emb|Z74385.1|SCYDR089W S.cerevisiae chromosome IV reading frame ORF YDR089w Length = 5934 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 attttttatacatttttcta 601 |||||||||||||||||||| Sbjct: 837 attttttatacatttttcta 818
>emb|Z74384.1|SCYDR088C S.cerevisiae chromosome IV reading frame ORF YDR088c Length = 3805 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 attttttatacatttttcta 601 |||||||||||||||||||| Sbjct: 1662 attttttatacatttttcta 1643
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 ttttctatctctttgcatcg 614 |||||||||||||||||||| Sbjct: 24208561 ttttctatctctttgcatcg 24208580
>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135793 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 ttttctatctctttgcatcg 614 |||||||||||||||||||| Sbjct: 57129 ttttctatctctttgcatcg 57148
>gb|AC147551.5| Mus musculus BAC clone RP23-77G5 from 18, complete sequence Length = 275269 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tttattggacacataatata 25 |||||||||||||||||||| Sbjct: 235374 tttattggacacataatata 235393
>gb|AC132130.3| Mus musculus BAC clone RP23-324D11 from 18, complete sequence Length = 183998 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tttattggacacataatata 25 |||||||||||||||||||| Sbjct: 1183 tttattggacacataatata 1202
>gb|AC141428.4| Mus musculus BAC clone RP23-127I7 from 10, complete sequence Length = 164381 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 36553 tctagctgcatattcatcaa 36534
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcaatggaaagatagctttc 386 |||||||||||||||||||| Sbjct: 1727318 tcaatggaaagatagctttc 1727337
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gatagctatgtttatcttca 83 |||||||||||||||||||| Sbjct: 658465 gatagctatgtttatcttca 658446
>gb|AC156790.2| Mus musculus BAC clone RP24-359N3 from chromosome 14, complete sequence Length = 233946 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 141689 tctagctgcatattcatcaa 141670
>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete sequence Length = 164443 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 115585 tctagctgcatattcatcaa 115604
>emb|AL670256.6| Mouse DNA sequence from clone RP23-300H22 on chromosome 4, complete sequence Length = 237318 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acaaaatagatagctatgtt 75 |||||||||||||||||||| Sbjct: 175287 acaaaatagatagctatgtt 175268
>emb|AL731713.8| Mouse DNA sequence from clone RP23-32L9 on chromosome 2, complete sequence Length = 219076 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 aagtgaaacaaataccccaa 528 |||||||||||||||||||| Sbjct: 172839 aagtgaaacaaataccccaa 172858
>gb|AC166344.4| Mus musculus BAC clone RP24-63B17 from chromosome 14, complete sequence Length = 224882 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tctagctgcatattcatcaa 242 |||||||||||||||||||| Sbjct: 3914 tctagctgcatattcatcaa 3895 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,447,368 Number of Sequences: 3902068 Number of extensions: 8447368 Number of successful extensions: 188847 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 188095 Number of HSP's gapped (non-prelim): 745 length of query: 719 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 696 effective length of database: 17,143,297,704 effective search space: 11931735201984 effective search space used: 11931735201984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)