ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags9b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197199.1| Oryza sativa (japonica cultivar-group) unknown ... 347 3e-92
2gb|AY105141.1| Zea mays PCO120313 mRNA sequence 289 6e-75
3gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 224 3e-55
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
5dbj|AK110769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 224 3e-55
7gb|BT013133.1| Lycopersicon esculentum clone 114426R, mRNA sequence 70 1e-08
8ref|XM_477429.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9emb|AJ620335.1| Oryza sativa (indica cultivar-group) mRNA for E3... 52 0.002
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AK067254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14gb|AY104994.1| Zea mays PCO088212 mRNA sequence 52 0.002
15emb|AJ867287.1| Oryza sativa (indica cultivar-group) mRNA for ub... 52 0.002
16ref|NM_125268.2| Arabidopsis thaliana protein binding / ubiquiti... 50 0.010
17ref|NM_001037021.1| Arabidopsis thaliana protein binding / ubiqu... 50 0.010
18gb|BT005412.1| Arabidopsis thaliana clone U51164 unknown protein... 50 0.010
19gb|AY088898.1| Arabidopsis thaliana clone 99033 mRNA, complete s... 50 0.010
20dbj|AK118993.1| Arabidopsis thaliana At5g58790 mRNA for unknown ... 50 0.010
21dbj|AB020755.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.010
22gb|AC157507.2| Medicago truncatula chromosome 2 BAC clone mth2-7... 46 0.15
23gb|AC022360.23| Homo sapiens 8 BAC RP11-58O3 (Roswell Park Cance... 44 0.61
24gb|AC090809.9| Homo sapiens chromosome 8, clone RP11-89G22, comp... 44 0.61
25gb|AC124076.5| Homo sapiens chromosome 8, clone RP11-962G15, com... 44 0.61
26dbj|AP006205.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 44 0.61
27dbj|AP000076.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 44 0.61
28gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosom... 42 2.4
29gb|BC053364.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone... 42 2.4
30gb|BC041038.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone... 42 2.4
31gb|BC009550.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone... 42 2.4
32gb|AY726571.1| Homo sapiens clone TESTIS-725 mRNA sequence 42 2.4
33gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome... 42 2.4
34emb|AL391497.9| Human DNA sequence from clone RP11-302M6 on chro... 42 2.4
35emb|AL136097.10| Human DNA sequence from clone RP11-62C3 on chro... 42 2.4
36emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 42 2.4
37gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Canc... 42 2.4
38gb|AC098936.2| Homo sapiens chromosome 1 clone RP11-576D8, compl... 42 2.4
39ref|NR_002830.1| Homo sapiens FAM51A1 pseudogene (LOC492303) on ... 42 2.4
40gb|AC021818.9| Homo sapiens chromosome 15, clone RP11-19J5, comp... 42 2.4
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
42dbj|AK099987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
43dbj|AK060662.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
44emb|AL732341.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.4
45emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.4
46ref|XM_600463.2| PREDICTED: Bos taurus similar to protein tyrosi... 40 9.5
47ref|XM_850358.1| PREDICTED: Canis familiaris similar to Makorin-... 40 9.5
48emb|AL935124.31| Mouse DNA sequence from clone RP23-88C15 on chr... 40 9.5
49ref|NM_001011577.1| Apis mellifera dorsal protein (Dl), mRNA 40 9.5
50gb|AC145855.2| Pan troglodytes BAC clone RP43-5O24 from 7, compl... 40 9.5
51emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in... 40 9.5
52emb|AL359202.16| Human DNA sequence from clone RP11-541F16 on ch... 40 9.5
53gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 40 9.5
54emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, ... 40 9.5
55gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, comp... 40 9.5
56gb|AC009331.6| Homo sapiens chromosome 7 clone RP11-371N6, compl... 40 9.5
57gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, comple... 40 9.5
58gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, compl... 40 9.5
59gb|AY268031.1| Apis mellifera dorsal protein splice variant B mR... 40 9.5
60gb|AY268030.1| Apis mellifera dorsal protein mRNA, complete cds;... 40 9.5
61gb|AC154225.2| Mus musculus BAC clone RP24-352F3 from chromosome... 40 9.5
62gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clon... 40 9.5
63gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, comple... 40 9.5
64gb|AC083871.2|AC083871 Homo sapiens chromosome 7 clone RP11-140I... 40 9.5
65gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 9.5
66emb|BX510350.14| Mouse DNA sequence from clone RP23-123H13 on ch... 40 9.5
67gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 9.5
68emb|Z71609.1|SCYNL333W S.cerevisiae chromosome XIV reading frame... 40 9.5
69emb|Z71608.1|SCYNL332W S.cerevisiae chromosome XIV reading frame... 40 9.5
70emb|Z48220.1|SCTHI5GEN S.cerevisiae THI5 gene 40 9.5
71gb|BC084110.1| Xenopus laevis hypothetical LOC495020, mRNA (cDNA... 40 9.5
72dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI co... 40 9.5 
>ref|NM_197199.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0078O01.6), mRNA
          Length = 1073

 Score =  347 bits (175), Expect = 3e-92
 Identities = 331/379 (87%), Gaps = 3/379 (0%)
 Strand = Plus / Minus

                                                                       
Query: 317 tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
           ||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 729 tcattttatgtgggaatcataaatactgaagatgacatccggaacaatcagaggcagctt 670

                                                                       
Query: 377 gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
           |||||||||||||||||||| |||||||||||||||||| || ||||||| ||| |||||
Sbjct: 669 gtttatgtacatgaacagccttctgaggttctctcttgacactgtctccaagtcaaccac 610

                                                                       
Query: 437 gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
            || |  ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 609 atcttggtcctcaacatagatccataagtcaccagggtcagtcttcttcaagttgtcacg 550

                                                                       
Query: 497 gcagaatgggcaggactgtgaccctcgagttccagtcctggtagcatctgagacacatcg 556
           ||||||||| || ||||||||  || || ||||||||||||||||||||||| |||||  
Sbjct: 549 gcagaatggacaagactgtga-tcttgaattccagtcctggtagcatctgaggcacatat 491

                                                                       
Query: 557 catgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatcccacattcc 616
            ||| ||||||||||||||||| || ||||||||||||||||||||| ||||| || |||
Sbjct: 490 tatgggtgcagttgggcaacaccac-tttgctgttcatctccatgcaaatcccgcactcc 432

                                                                       
Query: 617 tcctccctttcagcatcaacatcagataagctggttgctttcgtcttcatctctccttct 676
           || || || || |||||||  || |||||| | ||| ||||| || ||||||||||||||
Sbjct: 431 tcttctctctcggcatcaatttcggataagat-gtttctttcatcctcatctctccttct 373

                              
Query: 677 gtacctctccatgcacacg 695
           |||||||||||||||||||
Sbjct: 372 gtacctctccatgcacacg 354



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 48  aaacagcactgcctccattcggggcaagctacagttctctattaacagagccatgtgaga 107
           ||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||| |||
Sbjct: 997 aaacagcactgcctccatttggggcatgcacaagttctctattgacagagccatgtcaga 938

                           
Query: 108 tatatacaaactggct 123
           ||||||||| ||||||
Sbjct: 937 tatatacaagctggct 922
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>gb|AY105141.1| Zea mays PCO120313 mRNA sequence
          Length = 1248

 Score =  289 bits (146), Expect = 6e-75
 Identities = 286/330 (86%), Gaps = 2/330 (0%)
 Strand = Plus / Minus

                                                                       
Query: 317 tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
           |||||| |||||||||||||| || ||||||||||| || || || |||||||| |||||
Sbjct: 903 tcatttgatgtgggaatcatacacgctgaagatgacgtctgggacaatcagaggcagctt 844

                                                                       
Query: 377 gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
           | ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 843 gcttatgtacatgaacagccgtctgaggttctcgctcgacaccgtctccatgtcgaccac 784

                                                                       
Query: 437 gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
            || |  ||||| || || ||||||| ||||| |||    ||||| |||| |||||||||
Sbjct: 783 atcttggtcctcaacatagatccacaggtcactaggacaggtcttcttcaggttgtcacg 724

                                                                       
Query: 497 gcagaatgggcaggactgtgaccctcgagttccagtcctggtagcatctgagacacatcg 556
           |||||||||||||||||| ||  || ||  ||||||||||||| ||||||| |||||| |
Sbjct: 723 gcagaatgggcaggactgcga-tcttgaactccagtcctggtaacatctgatacacatag 665

                                                                       
Query: 557 catgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatcccacattcc 616
           |||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||
Sbjct: 664 catgggtgcagttgggcaacacaac-tttgctgttcatctccatgcaaatcccacactcc 606

                                         
Query: 617 tcctccctttcagcatcaacatcagataag 646
           || ||||| ||| |||||| ||||||||||
Sbjct: 605 tcttccctctcaacatcaatatcagataag 576



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 64/75 (85%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                        
Query: 56   ctgcctccattcggggcaagctacagttctctattaacagagccatgtgagatatataca 115
            ||||||||||| ||||||||| ||||| | |||||||| |||||| || |||||| ||||
Sbjct: 1157 ctgcctccatttggggcaagc-acagtcccctattaactgagccaagtcagatatgtaca 1099

                           
Query: 116  aactggctggatatg 130
             | |||||| |||||
Sbjct: 1098 gagtggctgcatatg 1084
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score =  224 bits (113), Expect = 3e-55
 Identities = 179/201 (89%)
 Strand = Plus / Minus

                                                                         
Query: 317   tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
             ||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 68276 tcattttatgtgggaatcataaatactgaagatgacatccggaacaatcagaggcagctt 68217

                                                                         
Query: 377   gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
             |||||||||||||||||||| |||||||||||||||||| || ||||||| ||| |||||
Sbjct: 68216 gtttatgtacatgaacagccttctgaggttctctcttgacactgtctccaagtcaaccac 68157

                                                                         
Query: 437   gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
              || |  ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 68156 atcttggtcctcaacatagatccataagtcaccagggtcagtcttcttcaagttgtcacg 68097

                                  
Query: 497   gcagaatgggcaggactgtga 517
             ||||||||| || ||||||||
Sbjct: 68096 gcagaatggacaagactgtga 68076



 Score =  143 bits (72), Expect = 9e-31
 Identities = 146/168 (86%), Gaps = 2/168 (1%)
 Strand = Plus / Minus

                                                                         
Query: 528   ccagtcctggtagcatctgagacacatcgcatgtgtgcagttgggcaacacaacttttgc 587
             ||||||||||||||||||||| |||||   ||| ||||||||||||||||| ||||| ||
Sbjct: 67116 ccagtcctggtagcatctgaggcacatattatgggtgcagttgggcaacaccacttt-gc 67058

                                                                         
Query: 588   tgttcatctccatgcagatcccacattcctcctccctttcagcatcaacatcagataagc 647
             |||||||||||||||| ||||| || ||||| || || || |||||||  || |||||| 
Sbjct: 67057 tgttcatctccatgcaaatcccgcactcctcttctctctcggcatcaatttcggataaga 66998

                                                             
Query: 648   tggttgctttcgtcttcatctctccttctgtacctctccatgcacacg 695
             || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 66997 tgttt-ctttcatcctcatctctccttctgtacctctccatgcacacg 66951



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                         
Query: 48    aaacagcactgcctccattcggggcaagctacagttctctattaacagagccatgtgaga 107
             ||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||| |||
Sbjct: 68544 aaacagcactgcctccatttggggcatgcacaagttctctattgacagagccatgtcaga 68485

                             
Query: 108   tatatacaaactggct 123
             ||||||||| ||||||
Sbjct: 68484 tatatacaagctggct 68469
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  224 bits (113), Expect = 3e-55
 Identities = 179/201 (89%)
 Strand = Plus / Minus

                                                                            
Query: 317      tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
                ||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 18564865 tcattttatgtgggaatcataaatactgaagatgacatccggaacaatcagaggcagctt 18564806

                                                                            
Query: 377      gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
                |||||||||||||||||||| |||||||||||||||||| || ||||||| ||| |||||
Sbjct: 18564805 gtttatgtacatgaacagccttctgaggttctctcttgacactgtctccaagtcaaccac 18564746

                                                                            
Query: 437      gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
                 || |  ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 18564745 atcttggtcctcaacatagatccataagtcaccagggtcagtcttcttcaagttgtcacg 18564686

                                     
Query: 497      gcagaatgggcaggactgtga 517
                ||||||||| || ||||||||
Sbjct: 18564685 gcagaatggacaagactgtga 18564665



 Score =  143 bits (72), Expect = 9e-31
 Identities = 146/168 (86%), Gaps = 2/168 (1%)
 Strand = Plus / Minus

                                                                            
Query: 528      ccagtcctggtagcatctgagacacatcgcatgtgtgcagttgggcaacacaacttttgc 587
                ||||||||||||||||||||| |||||   ||| ||||||||||||||||| ||||| ||
Sbjct: 18563705 ccagtcctggtagcatctgaggcacatattatgggtgcagttgggcaacaccacttt-gc 18563647

                                                                            
Query: 588      tgttcatctccatgcagatcccacattcctcctccctttcagcatcaacatcagataagc 647
                |||||||||||||||| ||||| || ||||| || || || |||||||  || |||||| 
Sbjct: 18563646 tgttcatctccatgcaaatcccgcactcctcttctctctcggcatcaatttcggataaga 18563587

                                                                
Query: 648      tggttgctttcgtcttcatctctccttctgtacctctccatgcacacg 695
                || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 18563586 tgttt-ctttcatcctcatctctccttctgtacctctccatgcacacg 18563540



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                            
Query: 48       aaacagcactgcctccattcggggcaagctacagttctctattaacagagccatgtgaga 107
                ||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||| |||
Sbjct: 18565133 aaacagcactgcctccatttggggcatgcacaagttctctattgacagagccatgtcaga 18565074

                                
Query: 108      tatatacaaactggct 123
                ||||||||| ||||||
Sbjct: 18565073 tatatacaagctggct 18565058
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>dbj|AK110769.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-A09, full
            insert sequence
          Length = 1404

 Score =  224 bits (113), Expect = 3e-55
 Identities = 179/201 (89%)
 Strand = Plus / Plus

                                                                        
Query: 317  tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
            ||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 1033 tcattttatgtgggaatcataaatactgaagatgacatccggaacaatcagaggcagctt 1092

                                                                        
Query: 377  gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
            |||||||||||||||||||| |||||||||||||||||| || ||||||| ||| |||||
Sbjct: 1093 gtttatgtacatgaacagccttctgaggttctctcttgacactgtctccaagtcaaccac 1152

                                                                        
Query: 437  gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
             || |  ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1153 atcttggtcctcaacatagatccataagtcaccagggtcagtcttcttcaagttgtcacg 1212

                                 
Query: 497  gcagaatgggcaggactgtga 517
            ||||||||| || ||||||||
Sbjct: 1213 gcagaatggacaagactgtga 1233



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Plus

                                                                       
Query: 48  aaacagcactgcctccattcggggcaagctacagttctctattaacagagccatgtgaga 107
           ||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||| |||
Sbjct: 765 aaacagcactgcctccatttggggcatgcacaagttctctattgacagagccatgtcaga 824

                           
Query: 108 tatatacaaactggct 123
           ||||||||| ||||||
Sbjct: 825 tatatacaagctggct 840
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  224 bits (113), Expect = 3e-55
 Identities = 179/201 (89%)
 Strand = Plus / Minus

                                                                            
Query: 317      tcattttatgtgggaatcatagacactgaagatgacatcaggcacgatcagagggagctt 376
                ||||||||||||||||||||| | ||||||||||||||| || || |||||||| |||||
Sbjct: 18575318 tcattttatgtgggaatcataaatactgaagatgacatccggaacaatcagaggcagctt 18575259

                                                                            
Query: 377      gtttatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtcgaccac 436
                |||||||||||||||||||| |||||||||||||||||| || ||||||| ||| |||||
Sbjct: 18575258 gtttatgtacatgaacagccttctgaggttctctcttgacactgtctccaagtcaaccac 18575199

                                                                            
Query: 437      gtcatcatcctcgacgtaaatccacaagtcaccagggtcagtcttattcaagttgtcacg 496
                 || |  ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 18575198 atcttggtcctcaacatagatccataagtcaccagggtcagtcttcttcaagttgtcacg 18575139

                                     
Query: 497      gcagaatgggcaggactgtga 517
                ||||||||| || ||||||||
Sbjct: 18575138 gcagaatggacaagactgtga 18575118



 Score =  143 bits (72), Expect = 9e-31
 Identities = 146/168 (86%), Gaps = 2/168 (1%)
 Strand = Plus / Minus

                                                                            
Query: 528      ccagtcctggtagcatctgagacacatcgcatgtgtgcagttgggcaacacaacttttgc 587
                ||||||||||||||||||||| |||||   ||| ||||||||||||||||| ||||| ||
Sbjct: 18574158 ccagtcctggtagcatctgaggcacatattatgggtgcagttgggcaacaccacttt-gc 18574100

                                                                            
Query: 588      tgttcatctccatgcagatcccacattcctcctccctttcagcatcaacatcagataagc 647
                |||||||||||||||| ||||| || ||||| || || || |||||||  || |||||| 
Sbjct: 18574099 tgttcatctccatgcaaatcccgcactcctcttctctctcggcatcaatttcggataaga 18574040

                                                                
Query: 648      tggttgctttcgtcttcatctctccttctgtacctctccatgcacacg 695
                || || ||||| || |||||||||||||||||||||||||||||||||
Sbjct: 18574039 tgttt-ctttcatcctcatctctccttctgtacctctccatgcacacg 18573993



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                            
Query: 48       aaacagcactgcctccattcggggcaagctacagttctctattaacagagccatgtgaga 107
                ||||||||||||||||||| |||||| ||   ||||||||||| |||||||||||| |||
Sbjct: 18575586 aaacagcactgcctccatttggggcatgcacaagttctctattgacagagccatgtcaga 18575527

                                
Query: 108      tatatacaaactggct 123
                ||||||||| ||||||
Sbjct: 18575526 tatatacaagctggct 18575511
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>gb|BT013133.1| Lycopersicon esculentum clone 114426R, mRNA sequence
          Length = 1327

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 582 ttttgctgttcatctccatgcagatcccacattcctcctccctttca 628
           ||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 693 ttttgctgttcatttccatgcagattccacattcctcttccctttca 647
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>ref|XM_477429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1107

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 594 tctccatgcagatcccacattcctcctccctttc 627
           |||||||||| ||||||||||| |||||||||||
Sbjct: 648 tctccatgcaaatcccacattcatcctccctttc 615
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>emb|AJ620335.1| Oryza sativa (indica cultivar-group) mRNA for E3 ubiquitin ligase
           (ubl gene)
          Length = 762

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 594 tctccatgcagatcccacattcctcctccctttc 627
           |||||||||| ||||||||||| |||||||||||
Sbjct: 487 tctccatgcaaatcccacattcatcctccctttc 454
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 594      tctccatgcagatcccacattcctcctccctttc 627
                |||||||||| ||||||||||| |||||||||||
Sbjct: 10309311 tctccatgcaaatcccacattcatcctccctttc 10309278
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>dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0091L05
          Length = 173983

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 594   tctccatgcagatcccacattcctcctccctttc 627
             |||||||||| ||||||||||| |||||||||||
Sbjct: 20491 tctccatgcaaatcccacattcatcctccctttc 20458
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>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1029H08
          Length = 137050

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 594    tctccatgcagatcccacattcctcctccctttc 627
              |||||||||| ||||||||||| |||||||||||
Sbjct: 131230 tctccatgcaaatcccacattcatcctccctttc 131197
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>dbj|AK067254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099E09, full
           insert sequence
          Length = 1107

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 594 tctccatgcagatcccacattcctcctccctttc 627
           |||||||||| ||||||||||| |||||||||||
Sbjct: 648 tctccatgcaaatcccacattcatcctccctttc 615
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>gb|AY104994.1| Zea mays PCO088212 mRNA sequence
          Length = 941

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 372 agcttgtttatgtacatgaacagccgtctgaggttctc 409
           ||||| |||||||||||||||||||| |||| ||||||
Sbjct: 856 agcttatttatgtacatgaacagccgcctgatgttctc 819
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>emb|AJ867287.1| Oryza sativa (indica cultivar-group) mRNA for ubiquitin ligase E3
           (ubl gene)
          Length = 762

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 594 tctccatgcagatcccacattcctcctccctttc 627
           |||||||||| ||||||||||| |||||||||||
Sbjct: 487 tctccatgcaaatcccacattcatcctccctttc 454
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>ref|NM_125268.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G58787 transcript variant
           AT5G58787.1 mRNA, complete cds
          Length = 1292

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 584 ttgctgttcatctccatgcagatcccacattcctcctccct 624
           ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 741 ttgctgttcatctccatacagattccacattcttcttccct 701
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>ref|NM_001037021.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G58787 transcript variant
           AT5G58787.2 mRNA, complete cds
          Length = 1262

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 584 ttgctgttcatctccatgcagatcccacattcctcctccct 624
           ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 696 ttgctgttcatctccatacagattccacattcttcttccct 656
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>gb|BT005412.1| Arabidopsis thaliana clone U51164 unknown protein (At5g58787) mRNA,
           complete cds
          Length = 760

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 584 ttgctgttcatctccatgcagatcccacattcctcctccct 624
           ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 458 ttgctgttcatctccatacagattccacattcttcttccct 418
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>gb|AY088898.1| Arabidopsis thaliana clone 99033 mRNA, complete sequence
          Length = 1167

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 584 ttgctgttcatctccatgcagatcccacattcctcctccct 624
           ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 642 ttgctgttcatctccatacagattccacattcttcttccct 602
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>dbj|AK118993.1| Arabidopsis thaliana At5g58790 mRNA for unknown protein, complete
           cds, clone: RAFL21-32-L04
          Length = 1027

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 584 ttgctgttcatctccatgcagatcccacattcctcctccct 624
           ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 641 ttgctgttcatctccatacagattccacattcttcttccct 601
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>dbj|AB020755.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZN1
          Length = 81672

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 584   ttgctgttcatctccatgcagatcccacattcctcctccct 624
             ||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 78578 ttgctgttcatctccatacagattccacattcttcttccct 78538
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>gb|AC157507.2| Medicago truncatula chromosome 2 BAC clone mth2-78b21, complete
             sequence
          Length = 107839

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 380   tatgtacatgaacagccgtctgaggttctctcttgataccgtctccatgtc 430
             |||||||||||| |||| ||| || ||||| |||| |||||| ||||||||
Sbjct: 80768 tatgtacatgaaaagccttctaagattctcccttgttaccgtttccatgtc 80818
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>gb|AC022360.23| Homo sapiens 8 BAC RP11-58O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171991

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 28    ataaaacatgggaagatatgaaacag 53
             ||||||||| ||||||||||||||||
Sbjct: 17433 ataaaacataggaagatatgaaacag 17408
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>gb|AC090809.9| Homo sapiens chromosome 8, clone RP11-89G22, complete sequence
          Length = 170261

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 24     gggaataaaacatgggaagata 45
              ||||||||||||||||||||||
Sbjct: 133316 gggaataaaacatgggaagata 133295
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>gb|AC124076.5| Homo sapiens chromosome 8, clone RP11-962G15, complete sequence
          Length = 183098

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     gggaataaaacatgggaagata 45
              ||||||||||||||||||||||
Sbjct: 171179 gggaataaaacatgggaagata 171200
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>dbj|AP006205.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-441L16, complete
             sequence
          Length = 157665

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 24    gggaataaaacatgggaagata 45
             ||||||||||||||||||||||
Sbjct: 60254 gggaataaaacatgggaagata 60233
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>dbj|AP000076.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 12/19
          Length = 100000

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    gggaataaaacatgggaagata 45
             ||||||||||||||||||||||
Sbjct: 59664 gggaataaaacatgggaagata 59685
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>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence
          Length = 189243

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    aaggagctgggcacttggctg 286
              |||||||||||||||||||||
Sbjct: 106639 aaggagctgggcacttggctg 106659
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>gb|BC053364.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone IMAGE:6141064),
            with apparent retained intron
          Length = 1715

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 660  tcttcatctctccttctgtac 680
            |||||||||||||||||||||
Sbjct: 1425 tcttcatctctccttctgtac 1445
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>gb|BC041038.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone IMAGE:4810823),
            with apparent retained intron
          Length = 1515

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 660  tcttcatctctccttctgtac 680
            |||||||||||||||||||||
Sbjct: 1247 tcttcatctctccttctgtac 1267
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>gb|BC009550.1| Homo sapiens FAM51A1 pseudogene, mRNA (cDNA clone MGC:10091
           IMAGE:3898110), complete cds
          Length = 861

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 660 tcttcatctctccttctgtac 680
           |||||||||||||||||||||
Sbjct: 556 tcttcatctctccttctgtac 576
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>gb|AY726571.1| Homo sapiens clone TESTIS-725 mRNA sequence
          Length = 1677

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 660  tcttcatctctccttctgtac 680
            |||||||||||||||||||||
Sbjct: 1416 tcttcatctctccttctgtac 1436
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>gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome 5, complete sequence
          Length = 211796

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 266    aaggagctgggcacttggctg 286
              |||||||||||||||||||||
Sbjct: 204868 aaggagctgggcacttggctg 204848
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>emb|AL391497.9| Human DNA sequence from clone RP11-302M6 on chromosome 1 Contains the 3'
              end of the LRRC5 gene for leucine rich repeat containing 5,
              a two novel genes, a novel pseudogene, the 5' end of a
              novel gene (FLJ20403) and a CpG island, complete sequence
          Length = 189762

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 660    tcttcatctctccttctgtac 680
              |||||||||||||||||||||
Sbjct: 169442 tcttcatctctccttctgtac 169422
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>emb|AL136097.10| Human DNA sequence from clone RP11-62C3 on chromosome 9q22.1-22.33
             Contains a novel pseudogene, a novel gene, the IARS gene
             for isoleucine-tRNA synthetase, the  gene for a novel
             protein (FLJ20736), the 5' end of a novel gene, a UPF0183
             protein pseudogene, the NOL8 gene for nucleolar protein 8
             and three CpG islands, complete sequence
          Length = 193488

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    acagagccatgtgagatatat 112
             |||||||||||||||||||||
Sbjct: 94619 acagagccatgtgagatatat 94599
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 490   tgtcacggcagaatgggcaggactg 514
             ||||||||||||| |||||||||||
Sbjct: 57500 tgtcacggcagaaggggcaggactg 57476



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                         
Query: 550   cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
             ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 56681 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 56623
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>gb|AC116303.6| Homo sapiens 3 BAC RP11-276B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51070

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    aaaacatgggaagatatgaaa 50
             |||||||||||||||||||||
Sbjct: 47871 aaaacatgggaagatatgaaa 47851
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>gb|AC098936.2| Homo sapiens chromosome 1 clone RP11-576D8, complete sequence
          Length = 151324

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 666    tctctccttctgtacctctcc 686
              |||||||||||||||||||||
Sbjct: 125296 tctctccttctgtacctctcc 125276
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>ref|NR_002830.1| Homo sapiens FAM51A1 pseudogene (LOC492303) on chromosome 1
          Length = 1715

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 660  tcttcatctctccttctgtac 680
            |||||||||||||||||||||
Sbjct: 1425 tcttcatctctccttctgtac 1445
to top
>gb|AC021818.9| Homo sapiens chromosome 15, clone RP11-19J5, complete sequence
          Length = 168639

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 660   tcttcatctctccttctgtac 680
             |||||||||||||||||||||
Sbjct: 77697 tcttcatctctccttctgtac 77677
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 490      tgtcacggcagaatgggcaggactg 514
                ||||||||||||| |||||||||||
Sbjct: 34751940 tgtcacggcagaaggggcaggactg 34751916



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                            
Query: 550      cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
                ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 34751121 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 34751063
to top
>dbj|AK099987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B11, full
            insert sequence
          Length = 1592

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 490  tgtcacggcagaatgggcaggactg 514
            ||||||||||||| |||||||||||
Sbjct: 1174 tgtcacggcagaaggggcaggactg 1150



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 550  cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
            ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 1115 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 1057
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>dbj|AK060662.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B04, full
           insert sequence
          Length = 1219

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 490 tgtcacggcagaatgggcaggactg 514
           ||||||||||||| |||||||||||
Sbjct: 800 tgtcacggcagaaggggcaggactg 776



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                       
Query: 550 cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
           ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 741 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 683
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>emb|AL732341.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0213E10, complete
            sequence
          Length = 26755

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 490  tgtcacggcagaatgggcaggactg 514
            ||||||||||||| |||||||||||
Sbjct: 3865 tgtcacggcagaaggggcaggactg 3841



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 550  cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
            ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 3046 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 2988
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 490   tgtcacggcagaatgggcaggactg 514
             ||||||||||||| |||||||||||
Sbjct: 93202 tgtcacggcagaaggggcaggactg 93178



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                         
Query: 550   cacatcgcatgtgtgcagttgggcaacacaacttttgctgttcatctccatgcagatccc 609
             ||||| |||||  ||||||||||||| |||||  ||| | |||||||||||||| |||||
Sbjct: 92383 cacatagcatggctgcagttgggcaagacaac-cttgttattcatctccatgcaaatccc 92325
to top
>ref|XM_600463.2| PREDICTED: Bos taurus similar to protein tyrosine phosphatase,
            receptor type, Q isoform 2 precursor (LOC522188), mRNA
          Length = 6234

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 622  cctttcagcatcaacatcag 641
            ||||||||||||||||||||
Sbjct: 4639 cctttcagcatcaacatcag 4658
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>ref|XM_850358.1| PREDICTED: Canis familiaris similar to Makorin-1 (RING finger
           protein 61) (LOC491496), mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 593 atctccatgcagatcccaca 612
           ||||||||||||||||||||
Sbjct: 275 atctccatgcagatcccaca 256
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>emb|AL935124.31| Mouse DNA sequence from clone RP23-88C15 on chromosome 2, complete
              sequence
          Length = 193805

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 597    ccatgcagatcccacattcctcctccctttca 628
              ||||||| ||||| ||||||||||| ||||||
Sbjct: 109724 ccatgcatatcccccattcctcctctctttca 109755
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>ref|NM_001011577.1| Apis mellifera dorsal protein (Dl), mRNA
          Length = 2389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ttgtttatgtacatgaacag 394
            ||||||||||||||||||||
Sbjct: 1104 ttgtttatgtacatgaacag 1085
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>gb|AC145855.2| Pan troglodytes BAC clone RP43-5O24 from 7, complete sequence
          Length = 178643

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    agattaaaaggagctgggca 278
              ||||||||||||||||||||
Sbjct: 146709 agattaaaaggagctgggca 146728
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>emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in linkage group 3,
            complete sequence
          Length = 163751

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  gggagcttgtttatgtacat 388
            ||||||||||||||||||||
Sbjct: 3826 gggagcttgtttatgtacat 3845
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>emb|AL359202.16| Human DNA sequence from clone RP11-541F16 on chromosome 9, complete
             sequence
          Length = 115372

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tgaggaccttgactagggga 304
             ||||||||||||||||||||
Sbjct: 70810 tgaggaccttgactagggga 70829
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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224930

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 625   ttcagcatcaacatcagata 644
             ||||||||||||||||||||
Sbjct: 92893 ttcagcatcaacatcagata 92912
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>emb|X83226.1|SCDNANO S.cerevisiae chromosome XIV, N0295, N0300, N0305 & N0310 genes
          Length = 8223

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 atatatacaaactggctggatatg 130
           |||||||||||||||||| |||||
Sbjct: 291 atatatacaaactggctgaatatg 268
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>gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, complete sequence
          Length = 207040

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 666    tctctccttctgtacctctc 685
              ||||||||||||||||||||
Sbjct: 132489 tctctccttctgtacctctc 132508
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>gb|AC009331.6| Homo sapiens chromosome 7 clone RP11-371N6, complete sequence
          Length = 158298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   agattaaaaggagctgggca 278
             ||||||||||||||||||||
Sbjct: 31007 agattaaaaggagctgggca 30988
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>gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, complete sequence
          Length = 142462

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   cattcattttatgtgggaat 333
             ||||||||||||||||||||
Sbjct: 47314 cattcattttatgtgggaat 47333
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>gb|AC091926.4| Homo sapiens chromosome 5 clone RP11-290G6, complete sequence
          Length = 209836

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 666   tctctccttctgtacctctc 685
             ||||||||||||||||||||
Sbjct: 77178 tctctccttctgtacctctc 77197
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>gb|AY268031.1| Apis mellifera dorsal protein splice variant B mRNA, complete cds;
            alternatively spliced
          Length = 3549

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ttgtttatgtacatgaacag 394
            ||||||||||||||||||||
Sbjct: 1104 ttgtttatgtacatgaacag 1085
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>gb|AY268030.1| Apis mellifera dorsal protein mRNA, complete cds; alternatively
            spliced
          Length = 2389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ttgtttatgtacatgaacag 394
            ||||||||||||||||||||
Sbjct: 1104 ttgtttatgtacatgaacag 1085
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>gb|AC154225.2| Mus musculus BAC clone RP24-352F3 from chromosome 13, complete sequence
          Length = 157586

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    gacactgaagatgacatcag 357
              ||||||||||||||||||||
Sbjct: 110810 gacactgaagatgacatcag 110829
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>gb|AF165124.1|AF165124 Homo sapiens chromosome 5q31.1-q33.1 clone BAC djn082c10 containing
             GABRG2 gene, complete sequence
          Length = 195909

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 666   tctctccttctgtacctctc 685
             ||||||||||||||||||||
Sbjct: 13451 tctctccttctgtacctctc 13470
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>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence
          Length = 189870

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tacaaaggggaataaaacat 36
             ||||||||||||||||||||
Sbjct: 51856 tacaaaggggaataaaacat 51837
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>gb|AC083871.2|AC083871 Homo sapiens chromosome 7 clone RP11-140I14, complete sequence
          Length = 150864

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   agattaaaaggagctgggca 278
             ||||||||||||||||||||
Sbjct: 71901 agattaaaaggagctgggca 71920
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 162    aagatctaaagcacaaacaaaaggtttg 189
              |||| |||||||| ||||||||||||||
Sbjct: 715140 aagagctaaagcataaacaaaaggtttg 715113
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>emb|BX510350.14| Mouse DNA sequence from clone RP23-123H13 on chromosome 2, complete
             sequence
          Length = 73642

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 670   tccttctgtacctctccatgcaca 693
             |||||||||| |||||||||||||
Sbjct: 27751 tccttctgtagctctccatgcaca 27728
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 239    ggcttgagagcttcggaaatagat 262
              ||||||||||||| ||||||||||
Sbjct: 205120 ggcttgagagctttggaaatagat 205143
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>emb|Z71609.1|SCYNL333W S.cerevisiae chromosome XIV reading frame ORF YNL333w
          Length = 1955

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 107  atatatacaaactggctggatatg 130
            |||||||||||||||||| |||||
Sbjct: 1404 atatatacaaactggctgaatatg 1381
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>emb|Z71608.1|SCYNL332W S.cerevisiae chromosome XIV reading frame ORF YNL332w
          Length = 2126

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 atatatacaaactggctggatatg 130
           |||||||||||||||||| |||||
Sbjct: 289 atatatacaaactggctgaatatg 266
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>emb|Z48220.1|SCTHI5GEN S.cerevisiae THI5 gene
          Length = 4182

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 atatatacaaactggctggatatg 130
           |||||||||||||||||| |||||
Sbjct: 121 atatatacaaactggctgaatatg 98
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>gb|BC084110.1| Xenopus laevis hypothetical LOC495020, mRNA (cDNA clone MGC:84128
            IMAGE:6950886), complete cds
          Length = 6606

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  tggctggatatgcttagctt 138
            ||||||||||||||||||||
Sbjct: 2989 tggctggatatgcttagctt 3008
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>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence
          Length = 270148

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   atatatacaaactggctggatatg 130
             |||||||||||||||||| |||||
Sbjct: 12376 atatatacaaactggctgaatatg 12353


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,125,825
Number of Sequences: 3902068
Number of extensions: 6125825
Number of successful extensions: 138049
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137712
Number of HSP's gapped (non-prelim): 320
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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