ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bags9p24 | 31 | AV833478 | not_full | gb|AC123952.5| Mus musculus BAC clone RP23-195B3 from chromosome 5, complete sequence Length = 191582 | 26 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9p23 | 582 | AV915127 | not_full | dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 | 92 | not_full | UBE2N_RAT (Q9EQX9) Ubiquitin-conjugating enzyme E2 N (EC 6.3.2.19) (Ubiquitin-protein ligase N) (Ubiquitin carrier protein N) (Bendless-like ubiquitin-conjugating enzyme) Length = 152 | 177 | -- | --- | - | -- | --- | - |
| bags9p22 | 602 | AV833477 | not_full | ref|NM_196906.1| Oryza sativa (japonica cultivar-group) putative WD domain containing protein (OSJNBa0071K18.5), mRNA Length = 2350 | 191 | not_full | NLE1_MOUSE (Q8VEJ4) Notchless homolog 1 Length = 484 | 467 | -- | --- | - | -- | --- | - |
| bags9p21 | 610 | AV915126 | not_full | dbj|AK069970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I06, full insert sequence Length = 1111 | 500 | not_full | RBP1C_ARATH (P92985) Ran-binding protein 1 homolog c Length = 219 | 28 | -- | --- | - | -- | --- | - |
| bags9p19 | 593 | AV915125 | not_full | ref|XM_477264.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1394 | 90 | not_full | Y3432_MYCBO (P59986) Hypothetical protein Mb3432 Length = 348 | 10 | -- | --- | - | -- | --- | - |
| bags9p17 | 521 | AV915124 | not_full | gb|AY224488.1| Oryza sativa (japonica cultivar-group) isolate 30843 putative ubiquitin-specific protease mRNA, partial cds Length = 2529 | 305 | not_full | UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15) (Ubiquitin thioesterase 36) (Ubiquitin-specific-processing protease 36) (Deubiquitinating enzyme 36) Length = 1121 | 12 | -- | --- | - | -- | --- | - |
| bags9p16 | 612 | AV915123 | not_full | gb|BT009392.1| Triticum aestivum clone wlm96.pk037.f18:fis, full insert mRNA sequence Length = 1654 | 39 | not_full | ARGC_ARATH (Q93Z70) Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplast precursor (EC 1.2.1.38) (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 401 | 153 | -- | --- | - | -- | --- | - |
| bags9p15 | 627 | AV915122 | not_full | emb|AJ296273.1|HVU296273 Hordeum vulgare aba7 gene for stress responsive protein Length = 1841 | 46 | full | SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit Length = 480 | 3 | -- | --- | - | -- | --- | - |
| bags9p13 | 618 | AV915121 | not_full | ref|XM_471943.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 | 123 | not_full | IN22_MAIZE (P49249) IN2-2 protein Length = 306 | 100 | -- | --- | - | -- | --- | - |
| bags9p12 | 663 | AV915120 | not_full | emb|X00630.1|CHHV02 Barley chloroplast genes rbcL and atpB Length = 2174 | 500 | not_full | RBL_WHEAT (P11383) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) Length = 477 | 500 | -- | --- | - | -- | --- | - |
| bags9p10 | 666 | AV915119 | not_full | ref|XM_474422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1905 | 65 | not_full | CAPP_VIBVY (Q7MH68) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC) Length = 877 | 7 | -- | --- | - | -- | --- | - |
| bags9p07 | 607 | AV915118 | not_full | gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence Length = 161536 | 71 | not_full | O51F1_HUMAN (Q8NH61) Olfactory receptor 51F2 Length = 330 | 1 | -- | --- | - | -- | --- | - |
| bags9p06 | 597 | AV915117 | not_full | gb|AF084005.1|AF084005 Avena fatua ras-like small monomeric GTP-binding protein (SAR1) mRNA, complete cds Length = 801 | 149 | not_full | SAR1B_ARATH (Q01474) GTP-binding protein SAR1B Length = 193 | 170 | -- | --- | - | -- | --- | - |
| bags9p05 | 537 | AV915116 | not_full | gb|AY059462.1| Triticum aestivum 68 kDa protein HP68 mRNA, complete cds Length = 1815 | 161 | not_full | ABCE1_MOUSE (P61222) ATP-binding cassette sub-family E member 1 (RNase L inhibitor) (Ribonuclease 4 inhibitor) (RNS4I) Length = 599 | 500 | -- | --- | - | -- | --- | - |
| bags9p04 | 38 | AV833476 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 64 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 21 | -- | --- | - | -- | --- | - |
| bags9o24 | 565 | AV915115 | not_full | emb|Y18343.1|OSA18343 Oryza sativa mRNA for transportin, partial Length = 1603 | 27 | not_full | TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b) Length = 887 | 12 | -- | --- | - | -- | --- | - |
| bags9o23 | 542 | AV915114 | not_full | gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 | 500 | not_full | HSP81_ORYSA (P33126) Heat shock protein 81-1 (HSP81-1) (Heat shock protein 82) Length = 699 | 205 | -- | --- | - | -- | --- | - |
| bags9o22 | 581 | AV915113 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 500 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 85 | -- | --- | - | -- | --- | - |
| bags9o21 | 603 | AV915112 | not_full | emb|Z23130.1|HVBLT63A H.vulgare BLT63 mRNA, complete CDS Length = 1560 | 500 | not_full | EF1A2_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha) Length = 447 | 500 | -- | --- | - | -- | --- | - |
| bags9o20 | 621 | AV915111 | not_full | dbj|AK067286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A22, full insert sequence Length = 622 | 68 | not_full | VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase G subunit 1) (Vacuolar proton pump G subunit 1) Length = 110 | 14 | -- | --- | - | -- | --- | - |
| bags9o18 | 542 | AV915110 | not_full | gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds Length = 2850 | 104 | not_full | SYM_ORYSA (Q9ZTS1) Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) Length = 804 | 258 | -- | --- | - | -- | --- | - |
| bags9o14 | 404 | AV915109 | not_full | gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 | 11 | not_full | SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor Length = 2170 | 25 | -- | --- | - | -- | --- | - |
| bags9o13 | 554 | AV915108 | not_full | dbj|AK061752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H06, full insert sequence Length = 1686 | 236 | not_full | IDHP_MEDSA (Q40345) Isocitrate dehydrogenase [NADP], chloroplast precursor (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP) (Fragment) Length = 433 | 38 | -- | --- | - | -- | --- | - |
| bags9o11 | 191 | AV915107 | not_full | emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 | 147 | not_full | METK_HORVU (P50299) S-adenosylmethionine synthetase 1 (EC 2.5.1.6) (Methionine adenosyltransferase 1) (AdoMet synthetase 1) Length = 394 | 194 | -- | --- | - | -- | --- | - |
| bags9o10 | 589 | AV915106 | not_full | ref|XM_475281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 | 54 | not_full | CC47_MOUSE (Q9D024) Coiled-coil domain-containing protein 47 precursor (Adipocyte-specific protein 4) Length = 483 | 12 | -- | --- | - | -- | --- | - |
| bags9o08 | 651 | AV915105 | not_full | gb|AY691640.1| Stenostachys laevis ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast Length = 1347 | 500 | not_full | RBL_HORVU (P05698) Ribulose bisphosphate carboxylase large chain precursor (EC 4.1.1.39) (RuBisCO large subunit) (Fragment) Length = 426 | 500 | -- | --- | - | -- | --- | - |
| bags9o07 | 589 | AV915104 | not_full | ref|NM_192420.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 | 58 | not_full | PYRG_NEUCR (Q7RZV2) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP synthetase) Length = 568 | 142 | -- | --- | - | -- | --- | - |
| bags9o06 | 631 | AV915103 | not_full | ref|NM_191342.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 | 32 | not_full | TIM50_ARATH (Q8VYE2) Import inner membrane translocase subunit TIM50, mitochondrial precursor Length = 376 | 43 | -- | --- | - | -- | --- | - |
| bags9o03 | 614 | AV915102 | not_full | ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 | 160 | not_full | TKTC_MAIZE (Q7SIC9) Transketolase, chloroplast (EC 2.2.1.1) (TK) Length = 675 | 171 | -- | --- | - | -- | --- | - |
| bags9o02 | 652 | AV915101 | not_full | ref|NM_192031.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 591 | 43 | not_full | RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20 Length = 98 | 217 | -- | --- | - | -- | --- | - |
| bags9o01 | 603 | AV915100 | not_full | ref|XM_483122.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2774 | 71 | not_full | SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein cleavage-activating protein (SREBP cleavage-activating protein) (SCAP) Length = 1278 | 5 | -- | --- | - | -- | --- | - |
| bags9n24 | 405 | AV915099 | not_full | emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 | 86 | not_full | RUBA_WHEAT (P08823) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) Length = 543 | 422 | -- | --- | - | -- | --- | - |
| bags9n21 | 442 | AV833475 | not_full | ref|NM_196468.1| Oryza sativa (japonica cultivar-group) contains similarity to chromaffin granule ATPase II homolog (OSJNBa0015J03.24), mRNA Length = 3429 | 119 | not_full | ALA3_ARATH (Q9XIE6) Putative phospholipid-transporting ATPase 3 (EC 3.6.3.1) (Aminophospholipid flippase 3) Length = 1213 | 137 | -- | --- | - | -- | --- | - |
| bags9n19 | 435 | AV833474 | not_full | dbj|AK113182.1| Ciona intestinalis cDNA, clone:ciad013f12, full insert sequence Length = 2277 | 5 | not_full | STAT1_HUMAN (P42224) Signal transducer and activator of transcription 1-alpha/beta (Transcription factor ISGF-3 components p91/p84) Length = 750 | 6 | -- | --- | - | -- | --- | - |
| bags9n18 | 564 | AV915098 | not_full | gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds Length = 1867 | 89 | not_full | ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 583 | 34 | -- | --- | - | -- | --- | - |
| bags9n17 | 684 | AV833473 | not_full | dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 | 69 | not_full | RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) Length = 791 | 14 | -- | --- | - | -- | --- | - |
| bags9n15 | 611 | AV915097 | not_full | gb|AY864064.1| Triticum aestivum gamma-glutamylcysteine synthetase (GSH1) mRNA, complete cds Length = 1794 | 75 | not_full | GSH1_BRAJU (O23736) Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) Length = 514 | 24 | -- | --- | - | -- | --- | - |
| bags9n14 | 611 | AV915096 | not_full | ref|NM_192090.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 | 219 | not_full | ATPBM_MAIZE (P19023) ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14) Length = 553 | 212 | -- | --- | - | -- | --- | - |
| bags9n11 | 624 | AV915095 | not_full | gb|U72212.1|TAU72212 Triticum aestivum manganese superoxide dismutase (SOD3.1) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 934 | 329 | not_full | SODM3_MAIZE (P41979) Superoxide dismutase [Mn] 3.3, mitochondrial precursor (EC 1.15.1.1) Length = 233 | 196 | -- | --- | - | -- | --- | - |
| bags9n10 | 597 | AV915094 | not_full | gb|AF084005.1|AF084005 Avena fatua ras-like small monomeric GTP-binding protein (SAR1) mRNA, complete cds Length = 801 | 152 | full | SAR1B_ARATH (Q01474) GTP-binding protein SAR1B Length = 193 | 170 | -- | --- | - | -- | --- | - |
| bags9n09 | 532 | AV915093 | not_full | ref|XM_470491.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3679 | 48 | not_full | XPO1_RAT (Q80U96) Exportin-1 (Exp1) (Chromosome region maintenance 1 protein homolog) Length = 1071 | 11 | -- | --- | - | -- | --- | - |
| bags9n08 | 212 | AV915092 | not_full | dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 | 29 | not_full | SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 | 214 | -- | --- | - | -- | --- | - |
| bags9n07 | 617 | AV915091 | not_full | ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 | 95 | not_full | PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1) (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 | 195 | -- | --- | - | -- | --- | - |
| bags9n06 | 537 | AV833472 | not_full | ref|XM_470167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2541 | 46 | not_full | POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 | 12 | -- | --- | - | -- | --- | - |
| bags9n05 | 622 | AV915090 | not_full | dbj|AK058672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H04, full insert sequence Length = 2175 | 48 | not_full | SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF Length = 1097 | 21 | -- | --- | - | -- | --- | - |
| bags9n04 | 569 | AV915089 | not_full | ref|XM_469518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4752 | 48 | not_full | HUTU_BACAN (Q81Y46) Urocanate hydratase (EC 4.2.1.49) (Urocanase) (Imidazolonepropionate hydrolase) Length = 552 | 3 | -- | --- | - | -- | --- | - |
| bags9n03 | 577 | AV833471 | not_full | ref|XM_464159.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2339 | 98 | not_full | PRH_ARATH (P48785) Pathogenesis-related homeodomain protein (PRHA) Length = 796 | 255 | -- | --- | - | -- | --- | - |
| bags9n02 | 401 | AV915088 | not_full | gb|AF526162.1| Peromyscus maniculatus microsatellite BW4-8 sequence Length = 441 | 119 | not_full | CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa) (Fragment) Length = 353 | 25 | -- | --- | - | -- | --- | - |
| bags9m24 | 105 | AV915087 | not_full | emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit Length = 1834 | 29 | not_full | RUBA_WHEAT (P08823) RuBisCO large subunit-binding protein subunit alpha, chloroplast precursor (60 kDa chaperonin subunit alpha) (CPN-60 alpha) (Fragment) Length = 543 | 392 | -- | --- | - | -- | --- | - |
| bags9m23 | 413 | AV915086 | not_full | gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 | 24 | not_full | IF2_CHLCV (Q823F2) Translation initiation factor IF-2 Length = 887 | 54 | -- | --- | - | -- | --- | - |
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