ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9n05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF 241 1e-63
2SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-li... 217 3e-56
3SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-rel... 132 8e-31
4SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-rel... 119 5e-27
5YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II 98 2e-20
6SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-rel... 94 2e-19
7SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-rel... 94 3e-19
8YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I 89 1e-17
9SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-rel... 85 1e-16
10SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100 77 3e-14
11SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protei... 76 9e-14
12SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protei... 69 1e-11
13SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal n... 56 7e-08
14CMAH_PONPY (Q8MJC6) Cytidine monophosphate-N-acetylneuraminic ac... 30 5.7
15PYHD_NPVLD (P20587) Polyhedrin (Major occlusion protein) 30 5.7
16NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subuni... 30 7.5
17CMAH_HUMAN (Q9Y471) Cytidine monophosphate-N-acetylneuraminic ac... 30 7.5
18CMAH_PANTR (O97598) Cytidine monophosphate-N-acetylneuraminic ac... 30 7.5
19CMAH_PANPA (Q8MJD0) Cytidine monophosphate-N-acetylneuraminic ac... 30 7.5
20CMAH_MACMU (Q9TUJ2) Cytidine monophosphate-N-acetylneuraminic ac... 30 7.5
21CMAH_GORGO (Q8MJC8) Cytidine monophosphate-N-acetylneuraminic ac... 30 7.5

>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF|
          Length = 1097

 Score =  241 bits (616), Expect = 1e-63
 Identities = 113/181 (62%), Positives = 139/181 (76%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            FEAVMRVRCSQG+QVQ+YSGNFCKR+PTDIDLPAID DK IMVT KHDDK Q+  ECGFQ
Sbjct: 752  FEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTLKHDDKLQDGAECGFQ 811

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            CALLYTT+ G+RRIRV+N+S+PCT+ L+NLFR ADL++QF  ++KQA   IPS +L  V+
Sbjct: 812  CALLYTTISGERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLKQAANEIPSKALPLVK 871

Query: 404  DQVTSTCINILQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSY 583
            +Q T+ CI IL +YRK CA+V+S+GQ                  K +GLR DGR+DDRS+
Sbjct: 872  EQATNDCITILHSYRKFCATVTSTGQLILPEALKLLPLYTLALTKGVGLRMDGRIDDRSF 931

Query: 584  W 586
            W
Sbjct: 932  W 932



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>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score =  217 bits (552), Expect = 3e-56
 Identities = 106/181 (58%), Positives = 129/181 (71%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            FEAVMRVRCSQG+QVQ+YSGNFCKR+PTDIDLPA            HDDK Q+  EC FQ
Sbjct: 748  FEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPA------------HDDKLQDGAECAFQ 795

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            CALLYTT+YG+RRIRV  +SL CT+ L+NLFR ADL++QF  ++KQA   IPS +L  V+
Sbjct: 796  CALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQAANEIPSKALPLVK 855

Query: 404  DQVTSTCINILQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRVDDRSY 583
            +Q T++CIN L AYRK CA+V+SSGQ                  KS+GLR DGR+DDRS+
Sbjct: 856  EQATNSCINALYAYRKFCATVTSSGQLILPEALKLFPLYTLALTKSVGLRTDGRIDDRSF 915

Query: 584  W 586
            W
Sbjct: 916  W 916



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>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)|
          Length = 1094

 Score =  132 bits (332), Expect = 8e-31
 Identities = 73/182 (40%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            F+AVMRVR S G++  D+ G F     TD++L  +D DKT+ V FKHDD+  E +    Q
Sbjct: 749  FDAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQ 808

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            CALLYT+  GQRR+R+ N++L C + L +L+R  + +    Y+ K A  G+ +S +  VR
Sbjct: 809  CALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVR 868

Query: 404  DQVTSTCINILQAYRKHCASVSSSGQXXXXXXXXXXXXXXXXXVKSIGLRNDGRV--DDR 577
            D + + C  IL  YRK+CAS SS+GQ                 +KS  L+    V  DDR
Sbjct: 869  DTLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDR 928

Query: 578  SY 583
            +Y
Sbjct: 929  AY 930



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>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)|
          Length = 1032

 Score =  119 bits (299), Expect = 5e-27
 Identities = 57/146 (39%), Positives = 89/146 (60%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            F+A+MRVR S G +  D+ G       TD+++ AID DK + V FKHDDK  E++    Q
Sbjct: 687  FDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQ 746

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            CA+LYTT+ GQRR+R+ N+ L C+S L +L++  + +A   +  K A   +    L  +R
Sbjct: 747  CAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIR 806

Query: 404  DQVTSTCINILQAYRKHCASVSSSGQ 481
            + + +   ++L  YRK+CAS S++ Q
Sbjct: 807  EILVNQTAHMLACYRKNCASPSAASQ 832



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>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II|
          Length = 891

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 51/146 (34%), Positives = 79/146 (54%)
 Frame = +2

Query: 44  FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
           +  +++ RCS GL+V  Y GNF +R P DI+  ++D+DK++ V F +D K     +  FQ
Sbjct: 532 YRVMLKTRCSNGLRVSKYLGNFLQRTPQDIEFGSLDADKSVTVLFSYDGKLNGALDAHFQ 591

Query: 224 CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            A+LYTT  G+RR+RV+N     TS   +    A +E     + K A   I + SL    
Sbjct: 592 TAVLYTTPSGERRVRVVNYCCAVTSKSYDTISLAIVEPIVAVLAKIASTNIAAGSLKDTS 651

Query: 404 DQVTSTCINILQAYRKHCASVSSSGQ 481
            ++    + IL +YRK  A+  + GQ
Sbjct: 652 VRLVEGVVKILSSYRKVAANRLTPGQ 677



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>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)|
            (Fragment)
          Length = 1078

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 54/145 (37%), Positives = 78/145 (53%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            FEAVMR+RC++GL +  + GNF  R    + LP ++ D    V    ++   +     FQ
Sbjct: 730  FEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQ 789

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
             ALLYT+  G+RRIRV  + LP  STLN++F  AD++A    +   A     ++SLS  R
Sbjct: 790  SALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDAR 849

Query: 404  DQVTSTCINILQAYRKHCASVSSSG 478
            D + +  I+ L AYR    S    G
Sbjct: 850  DALVNAVIDSLSAYRSSVLSNQQPG 874



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>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)|
          Length = 1090

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 54/145 (37%), Positives = 77/145 (53%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            FEAVMR+RC++GL +  + GNF  R    + LP ++ D    V    ++   +     FQ
Sbjct: 742  FEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQ 801

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
             ALLYT+  G+RRIRV  + LP  STLN +F  AD++A    +   A     ++SLS  R
Sbjct: 802  SALLYTSSKGERRIRVHTLCLPVVSTLNEVFLGADVQAISGLLANMAVDRSVTASLSDAR 861

Query: 404  DQVTSTCINILQAYRKHCASVSSSG 478
            D + +  I+ L AYR    S    G
Sbjct: 862  DALVNAVIDSLSAYRSSVLSGQQPG 886



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>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I|
          Length = 926

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 52/138 (37%), Positives = 80/138 (57%)
 Frame = +2

Query: 47  EAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQC 226
           EAVMRVR S GL++  + GNF  R       P+   D++ +V    +D   +     FQ 
Sbjct: 573 EAVMRVRGSNGLRMSSFYGNFFNRSSDLCAFPSFPRDQSYVVEVVIEDTITKPF-VSFQT 631

Query: 227 ALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRD 406
           A+L+TT  G+RRIRV+ ISLP T+++ +L+  AD  A   Y+  +A     SS+L++ RD
Sbjct: 632 AMLHTTCNGERRIRVLTISLPTTNSMTDLYASADQVAIAQYLTVRASEKALSSTLNEARD 691

Query: 407 QVTSTCINILQAYRKHCA 460
            + S  + IL+ Y+K+ A
Sbjct: 692 SIISKLVEILEVYKKNLA 709



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>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)|
          Length = 1268

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 49/144 (34%), Positives = 77/144 (53%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            FEAVMR+RC++GL +  + GNF  R    + L  I+ D    V    ++   + +   FQ
Sbjct: 920  FEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQ 979

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
             ALLYT+  G+RRIRV  + LP  S+L +++   D++A    +   A     SSSLS  R
Sbjct: 980  TALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDAR 1039

Query: 404  DQVTSTCINILQAYRKHCASVSSS 475
            D + +  ++ L AY    +++  S
Sbjct: 1040 DALVNAVVDSLSAYGSTVSNLQHS 1063



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>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 44/135 (32%), Positives = 67/135 (49%)
 Frame = +2

Query: 44   FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
            +EAVMR+RC +G++   Y GNF  R    + LPA+D DK   +    ++    +    FQ
Sbjct: 686  WEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLSLEETLLTSQTVYFQ 745

Query: 224  CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
             ALLYT   G+RRIRV     P  + L  ++R AD  +  +   + A     S+ L   R
Sbjct: 746  VALLYTASCGERRIRVHTSVAPVVTDLGEMYRQADTGSIVSLYARLAIEKSLSAKLDDAR 805

Query: 404  DQVTSTCINILQAYR 448
            + +    +  L+ YR
Sbjct: 806  NAIQQKIVKALKEYR 820



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>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal|
           with SEC13 protein 1)
          Length = 929

 Score = 75.9 bits (185), Expect = 9e-14
 Identities = 41/144 (28%), Positives = 73/144 (50%)
 Frame = +2

Query: 44  FEAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQ 223
           ++A+++VRCS GL V+ Y  +       D  +P +  D T+ V  K+D K +  T+  FQ
Sbjct: 538 YQALLKVRCSTGLSVEQYYCDSSDNTDHDPIIPVLTRDTTLDVLLKYDSKIKTGTDVHFQ 597

Query: 224 CALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVR 403
            ALLYT + G R++R IN S   ++ +  +F++ +       ++K     +      ++R
Sbjct: 598 TALLYTDIDGVRKVRSINTSGAVSNNIREIFKFINQNPVMRIMIKDVIKTLGDCDFVKIR 657

Query: 404 DQVTSTCINILQAYRKHCASVSSS 475
             +    + IL  YR   +S SS+
Sbjct: 658 RLIDDKMVEILTQYRGLVSSNSST 681



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>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)|
          Length = 876

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 43/135 (31%), Positives = 68/135 (50%)
 Frame = +2

Query: 47  EAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQC 226
           EAVMRVRCS GL+   + G+F  R         +  D++ +     +D       C  Q 
Sbjct: 511 EAVMRVRCSTGLRATSFFGHFFNRSSDLCAFSTMPRDQSYLFGISIEDSLMAEY-CYLQV 569

Query: 227 ALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRD 406
           + L T   G+RRIRV+ ++LP + +   +F  AD  A   ++ + A     +SS+   RD
Sbjct: 570 STLLTLNTGERRIRVMTLALPTSESAREVFASADQLAITDFMTQNAVTKALNSSMYSARD 629

Query: 407 QVTSTCINILQAYRK 451
            +T +  +IL AY+K
Sbjct: 630 FITKSLEDILNAYKK 644



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>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear|
           morphology 1)
          Length = 926

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 39/144 (27%), Positives = 69/144 (47%)
 Frame = +2

Query: 47  EAVMRVRCSQGLQVQDYSGNFCKRVPTDIDLPAIDSDKTIMVTFKHDDKFQENTECGFQC 226
           E VMR R S GL++  + G+F  R         +  D++ +     D+    +  C  Q 
Sbjct: 555 ETVMRARGSTGLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADY-CYVQV 613

Query: 227 ALLYTTVYGQRRIRVINISLPCTSTLNNLFRYADLEAQFTYVVKQAGIGIPSSSLSQVRD 406
           A+L +    QRRIR+I +++P T +L  ++  AD  A  ++   +A     +SSL   R 
Sbjct: 614 AVLLSLNNSQRRIRIITLAMPTTESLAEVYASADQLAIASFYNSKAVEKALNSSLDDARV 673

Query: 407 QVTSTCINILQAYRKHCASVSSSG 478
            +  +  +IL  Y+K     +++G
Sbjct: 674 LINKSVQDILATYKKEIVVSNTAG 697



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>CMAH_PONPY (Q8MJC6) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 585

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT--KAEVLKPPEES 483
           PN ++ L+  +S V+ + PRPG T   A +LK P +S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLARMLKDPTDS 412



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>PYHD_NPVLD (P20587) Polyhedrin (Major occlusion protein)|
          Length = 245

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 599 RQQRPNRIDRLLSHHSSVLCF*PRPGYTKAEVLKPPEESTVQKNSQMHNVFGRPGEC 429
           R  RPNR  + ++ H+ + C     GY   EV++  E STV+ N    ++  R G C
Sbjct: 126 RPTRPNRCYKFVAQHA-LRC---DEGYVPHEVIRIVEPSTVENNEYRISLAKRGGGC 178



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>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,|
           mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
           (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex
           I subunit)
          Length = 738

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 362 AGIGIPSSSLSQVRDQVTSTCINILQAYRKHCASVSSS 475
           AG+G+P  SL  +R ++ +   N+L+   +  A+ S+S
Sbjct: 658 AGVGLPYDSLGAIRSRIKTVAPNLLEVDERQPATFSTS 695



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>CMAH_HUMAN (Q9Y471) Cytidine monophosphate-N-acetylneuraminic acid|
           hydroxylase-like protein (CMP-NeuAc hydroxylase-like
           protein)
          Length = 486

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 465
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 277 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDRTDSKGIIEPPEGTKIYKDS 329



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>CMAH_PANTR (O97598) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase)
          Length = 590

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 465
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433



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>CMAH_PANPA (Q8MJD0) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 600

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 465
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428



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>CMAH_MACMU (Q9TUJ2) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase)
          Length = 590

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 465
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 381 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 433



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>CMAH_GORGO (Q8MJC8) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase|
           (EC 1.14.18.2) (CMP-N-acetylneuraminate monooxygenase)
           (CMP-N-acetylneuraminic acid hydroxylase) (CMP-NeuAc
           hydroxylase) (CMP-Neu5Ac hydroxylase) (Fragment)
          Length = 600

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = -3

Query: 587 PNRIDRLLSHHSSVLCF*PRPGYT------------KAEVLKPPEESTVQKNS 465
           PN ++ L+  +S V+ + PRPG T               +++PPE + + K+S
Sbjct: 376 PNELNNLIKKNSDVITWTPRPGATLDLGRMLKDPTDSKGIIEPPEGTKIYKDS 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,631,093
Number of Sequences: 219361
Number of extensions: 1832384
Number of successful extensions: 4077
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4071
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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