ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete seq... 46 0.13
2emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11... 46 0.13
3gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, comple... 44 0.53
4gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, comp... 44 0.53
5dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, c... 44 0.53
6gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.53
7gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete s... 44 0.53
8ref|XM_660399.1| Cryptosporidium hominis TU502 hypothetical prot... 42 2.1
9emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 42 2.1
10emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chr... 42 2.1
11gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, comp... 42 2.1
12emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chro... 42 2.1
13gb|AE014182.1| Mus musculus piebald deletion region section 10 o... 42 2.1
14gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, compl... 42 2.1
15gb|AC123593.1| Genomic sequence for Medicago truncatula, clone M... 42 2.1
16gb|AC154270.2| Mus musculus BAC clone RP24-259O16 from chromosom... 42 2.1
17gb|AC144630.2| Mus musculus BAC clone RP23-284O15 from chromosom... 40 8.3
18gb|AC147101.2| Mus musculus BAC clone RP23-455H16 from chromosom... 40 8.3
19gb|AC132582.3| Mus musculus BAC clone RP24-319N10 from chromosom... 40 8.3
20gb|AC105414.6| Homo sapiens BAC clone RP11-219L11 from 4, comple... 40 8.3
21gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, comple... 40 8.3
22emb|AL442224.17| Human DNA sequence from clone RP11-53B5 on chro... 40 8.3
23emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on ch... 40 8.3
24emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N1... 40 8.3
25gb|AC090229.15| Homo sapiens chromosome 18, clone RP11-873E20, c... 40 8.3
26ref|NM_001016688.1| Xenopus tropicalis secreted frizzled-related... 40 8.3
27emb|AL031261.2|SPBC3H7 S.pombe chromosome II cosmid c3H7 40 8.3
28gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome... 40 8.3
29emb|AL807239.5| Zebrafish DNA sequence from clone CH211-231H1 in... 40 8.3
30gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, c... 40 8.3
31gb|AC152920.17| Medicago truncatula clone mth2-101o15, complete ... 40 8.3
32gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, comp... 40 8.3
33gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete seq... 40 8.3
34emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in ... 40 8.3
35gb|AC113949.2| Homo sapiens chromosome 1 clone RP11-563M18, comp... 40 8.3
36gb|AC110809.3| Homo sapiens BAC clone RP11-754E11 from 4, comple... 40 8.3
37gb|AC023943.6| Homo sapiens chromosome , clone RP11-1G18, comple... 40 8.3
38dbj|AK171204.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
39gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Can... 40 8.3
40emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 i... 40 8.3
41gb|AF003387.1| Caenorhabditis elegans cosmid C44B11, complete se... 40 8.3
42ref|NM_001021660.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.3
43dbj|AK039210.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 8.3
44gb|AC092243.1|AC092243 Drosophila melanogaster, chromosome 2L, r... 40 8.3
45gb|AC016643.6|AC016643 Homo sapiens chromosome 5 clone RP11-480H... 40 8.3
46gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate h... 40 8.3
47gb|AC079468.3|AC079468 Homo sapiens chromosome 5 clone RP11-403A... 40 8.3
48emb|BX511226.5| Zebrafish DNA sequence from clone DKEY-41K7 in l... 40 8.3
49gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complet... 40 8.3
50gb|AC108028.4| Homo sapiens BAC clone RP11-72E18 from 4, complet... 40 8.3
51gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, compl... 40 8.3
52gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C... 40 8.3
53gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complet... 40 8.3
54gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, comple... 40 8.3
55gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complet... 40 8.3
56gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, co... 40 8.3
57gb|AC116015.16| Homo sapiens chromosome 11, clone RP11-356D19, c... 40 8.3
58gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, co... 40 8.3
59emb|CR749772.5| Zebrafish DNA sequence from clone DKEY-260P18 in... 40 8.3
60emb|Z75206.1|SCYOR298W S.cerevisiae chromosome XV reading frame ... 40 8.3
61gb|AE003642.3| Drosophila melanogaster chromosome 2L, section 51... 40 8.3
62emb|CR760192.1| Xenopus tropicalis finished cDNA, clone TNeu117g19 40 8.3
63gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c... 40 8.3
64dbj|AP006310.1| Homo sapiens genomic DNA, chromosome Un clone:CM... 40 8.3
65dbj|AP006223.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 8.3
66dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.3
67emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chrom... 40 8.3
68gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, comple... 40 8.3
69emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on ch... 40 8.3
70gb|U23519.2| Caenorhabditis elegans cosmid F26G1, complete sequence 40 8.3
71emb|AL593858.20| Mouse DNA sequence from clone RP23-151M22 on ch... 40 8.3 
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence
          Length = 161536

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 170    agtctgtaaacaacataaaggat 192
              |||||||||||||||||||||||
Sbjct: 111473 agtctgtaaacaacataaaggat 111495
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>emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11, COMPLETE SEQUENCE
          Length = 132508

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 170    agtctgtaaacaacataaaggat 192
              |||||||||||||||||||||||
Sbjct: 117124 agtctgtaaacaacataaaggat 117146
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>gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, complete sequence
          Length = 213921

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 465    atgaggtcatgtcttttgtgtcaaca 490
              |||||||||||||||||||| |||||
Sbjct: 155782 atgaggtcatgtcttttgtggcaaca 155807
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>gb|AC139190.1| Pan troglodytes BAC clone RP43-12I19 from Y, complete sequence
          Length = 159298

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 465    atgaggtcatgtcttttgtgtcaaca 490
              |||||||||||||||||||| |||||
Sbjct: 142598 atgaggtcatgtcttttgtggcaaca 142573
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>dbj|BS000551.1| Pan troglodytes chromosome Y clone:PTB-295A05, complete sequences
          Length = 161601

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 465   atgaggtcatgtcttttgtgtcaaca 490
             |||||||||||||||||||| |||||
Sbjct: 96082 atgaggtcatgtcttttgtggcaaca 96057
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 465      atgaggtcatgtcttttgtgtcaaca 490
                |||||||||||||||||||| |||||
Sbjct: 15411806 atgaggtcatgtcttttgtggcaaca 15411831
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>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence
          Length = 104879

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 167   gatagtctgtaaacaacataaaggat 192
             ||||||||||||||||||||| ||||
Sbjct: 36135 gatagtctgtaaacaacataatggat 36160
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>ref|XM_660399.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20434)
           partial mRNA
          Length = 645

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 545 aaattgatgaattatgttaag 565
           |||||||||||||||||||||
Sbjct: 181 aaattgatgaattatgttaag 201
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>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   tttgatttgcataaatggaaa 246
             |||||||||||||||||||||
Sbjct: 38006 tttgatttgcataaatggaaa 38026
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>emb|AL445932.12| Human DNA sequence from clone RP11-533L1 on chromosome 6 Contains the
             5' end of a novel gene, complete sequence
          Length = 163650

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   tacaaaaagtaagaattacat 466
             |||||||||||||||||||||
Sbjct: 52571 tacaaaaagtaagaattacat 52591
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>gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, complete sequence
          Length = 216914

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 336   tatgcattagcataccatatcaaatatat 364
             ||||||||||||||| | |||||||||||
Sbjct: 13503 tatgcattagcatacaaaatcaaatatat 13531
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>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains  a
             SEC61 gamma subunit (Sec61g) pseudogene, a limb expression
             1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene,
             the 5' end of the gene for an ortholog of human Ras
             association (RalGDS/AF-6) and pleckstrin homology domains
             1 RAPH1 and a CpG island, complete sequence
          Length = 198631

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 336   tatgcattagcataccatatcaaatatat 364
             ||||||||||||||| | |||||||||||
Sbjct: 60818 tatgcattagcatacaaaatcaaatatat 60790
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>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 250    tgtttcttagtatagatattt 270
              |||||||||||||||||||||
Sbjct: 338405 tgtttcttagtatagatattt 338425
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>gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, complete sequence
          Length = 112876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   tgtaatttccattcctttgat 231
             |||||||||||||||||||||
Sbjct: 21942 tgtaatttccattcctttgat 21922
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>gb|AC123593.1| Genomic sequence for Medicago truncatula, clone MTABa0052G10, complete
             sequence
          Length = 100769

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   taaaggatatgtattgcttaa 205
             |||||||||||||||||||||
Sbjct: 29949 taaaggatatgtattgcttaa 29929
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>gb|AC154270.2| Mus musculus BAC clone RP24-259O16 from chromosome 14, complete sequence
          Length = 177522

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    tgtttcttagtatagatattt 270
              |||||||||||||||||||||
Sbjct: 160128 tgtttcttagtatagatattt 160108
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>gb|AC144630.2| Mus musculus BAC clone RP23-284O15 from chromosome 1, complete sequence
          Length = 188928

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   ttgtggcaagcattgagtct 524
             ||||||||||||||||||||
Sbjct: 56624 ttgtggcaagcattgagtct 56605
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>gb|AC147101.2| Mus musculus BAC clone RP23-455H16 from chromosome 12, complete
             sequence
          Length = 168258

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tatgtattgcttaatgatgt 211
             ||||||||||||||||||||
Sbjct: 54465 tatgtattgcttaatgatgt 54484
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>gb|AC132582.3| Mus musculus BAC clone RP24-319N10 from chromosome 12, complete
             sequence
          Length = 159310

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tatgtattgcttaatgatgt 211
             ||||||||||||||||||||
Sbjct: 85997 tatgtattgcttaatgatgt 86016
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>gb|AC105414.6| Homo sapiens BAC clone RP11-219L11 from 4, complete sequence
          Length = 43622

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 10132 atgaggtcatgtcttttgtg 10151
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>gb|AC122868.2| Mus musculus BAC clone RP23-148H17 from 6, complete sequence
          Length = 202374

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 176   taaacaacataaaggatatgtatt 199
             ||||||||||||| ||||||||||
Sbjct: 31066 taaacaacataaatgatatgtatt 31089
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>emb|AL442224.17| Human DNA sequence from clone RP11-53B5 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 102957

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ttaccacaatgttagatagt 172
             ||||||||||||||||||||
Sbjct: 12591 ttaccacaatgttagatagt 12610
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>emb|AL357520.12| Human DNA sequence from clone RP11-288D15 on chromosome 10 Contains a
             pseudogene similar to part of glycogen synthase kinase 3
             and a ubiquitin-conjugating enzyme pseudogene, complete
             sequence
          Length = 178942

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    gttattatcaaagaaagtga 116
             ||||||||||||||||||||
Sbjct: 70232 gttattatcaaagaaagtga 70251
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>emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N18 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 122383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 93739 atgaggtcatgtcttttgtg 93758
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>gb|AC090229.15| Homo sapiens chromosome 18, clone RP11-873E20, complete sequence
          Length = 192106

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   taaattcaaattgatgaatt 557
             ||||||||||||||||||||
Sbjct: 20453 taaattcaaattgatgaatt 20434
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>ref|NM_001016688.1| Xenopus tropicalis secreted frizzled-related sequence protein 5
           (sfrp5), mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 ttagtatagatatttacaga 275
           ||||||||||||||||||||
Sbjct: 990 ttagtatagatatttacaga 971
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>emb|AL031261.2|SPBC3H7 S.pombe chromosome II cosmid c3H7
          Length = 45731

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  ttgcataaatggaaatattg 251
            ||||||||||||||||||||
Sbjct: 8594 ttgcataaatggaaatattg 8613
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>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete
            sequence
          Length = 215871

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 471  tcatgtcttttgtgtcaacagtga 494
            |||||| |||||||||||||||||
Sbjct: 5797 tcatgtgttttgtgtcaacagtga 5820
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>emb|AL807239.5| Zebrafish DNA sequence from clone CH211-231H1 in linkage group 14
              Contains the 5' part of a novel gene similar to human,
              rodent and Oreochromis mossambicus GRIA3 (ionotropic
              glutamate receptor AMPA3) and five CpG islands, complete
              sequence
          Length = 210702

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    gtatagatatttacagaaat 278
              ||||||||||||||||||||
Sbjct: 159181 gtatagatatttacagaaat 159200
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>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence
          Length = 194334

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 538    taaattcaaattgatgaatt 557
              ||||||||||||||||||||
Sbjct: 173580 taaattcaaattgatgaatt 173561
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>gb|AC152920.17| Medicago truncatula clone mth2-101o15, complete sequence
          Length = 124934

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ctgtaaacaacataaaggat 192
             ||||||||||||||||||||
Sbjct: 28816 ctgtaaacaacataaaggat 28797
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>gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, complete sequence
          Length = 171234

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gatttgcataaatggaaata 248
              ||||||||||||||||||||
Sbjct: 134843 gatttgcataaatggaaata 134862
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>gb|AC127020.16| Medicago truncatula clone mth2-9p1, complete sequence
          Length = 127642

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    cttaaattcaaattgatgaa 555
              ||||||||||||||||||||
Sbjct: 108935 cttaaattcaaattgatgaa 108916
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>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9,
             complete sequence
          Length = 217065

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   atgaattatgttaagattaa 570
             ||||||||||||||||||||
Sbjct: 24892 atgaattatgttaagattaa 24911
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>gb|AC113949.2| Homo sapiens chromosome 1 clone RP11-563M18, complete sequence
          Length = 172143

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   agtatagatatttacagaaa 277
             ||||||||||||||||||||
Sbjct: 24336 agtatagatatttacagaaa 24355
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>gb|AC110809.3| Homo sapiens BAC clone RP11-754E11 from 4, complete sequence
          Length = 98985

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 72736 atgaggtcatgtcttttgtg 72717
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>gb|AC023943.6| Homo sapiens chromosome , clone RP11-1G18, complete sequence
          Length = 153061

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    taatttccattcctttgatt 232
              ||||||||||||||||||||
Sbjct: 129390 taatttccattcctttgatt 129409
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>dbj|AK171204.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630308D21
           product:unclassifiable, full insert sequence
          Length = 1649

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 419 ataaactatgtttctgcaggaaca 442
           |||||| |||||||||||||||||
Sbjct: 67  ataaaccatgtttctgcaggaaca 44
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>gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128666

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tatgcattagcataccatat 355
             ||||||||||||||||||||
Sbjct: 71260 tatgcattagcataccatat 71279
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>emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 in linkage group 12,
             complete sequence
          Length = 249826

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   aaattgatgaattatgttaa 564
             ||||||||||||||||||||
Sbjct: 16773 aaattgatgaattatgttaa 16754
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>gb|AF003387.1| Caenorhabditis elegans cosmid C44B11, complete sequence
          Length = 35303

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 379   ttttctgtaatgtctagaattttt 402
             |||||||||||||||| |||||||
Sbjct: 12202 ttttctgtaatgtctataattttt 12179
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>ref|NM_001021660.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC3H7.16),
           partial mRNA
          Length = 6906

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 ttgcataaatggaaatattg 251
           ||||||||||||||||||||
Sbjct: 397 ttgcataaatggaaatattg 378
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>dbj|AK039210.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230108C01 product:unclassifiable, full
            insert sequence
          Length = 3578

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  ttctgttttctgtaatgtct 393
            ||||||||||||||||||||
Sbjct: 1530 ttctgttttctgtaatgtct 1549
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>gb|AC092243.1|AC092243 Drosophila melanogaster, chromosome 2L, region 34D-34E, BAC clone
             BACR09N24, complete sequence
          Length = 158758

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   atttgcataaatggaaatat 249
             ||||||||||||||||||||
Sbjct: 80714 atttgcataaatggaaatat 80695
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>gb|AC016643.6|AC016643 Homo sapiens chromosome 5 clone RP11-480H11, complete sequence
          Length = 179969

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    aggaacaaactacaaaaagt 455
              ||||||||||||||||||||
Sbjct: 162496 aggaacaaactacaaaaagt 162477
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>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and
              partial cds
          Length = 270491

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 471    tcatgtcttttgtgtcaacagtga 494
              |||||| |||||||||||||||||
Sbjct: 211335 tcatgtgttttgtgtcaacagtga 211312
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>gb|AC079468.3|AC079468 Homo sapiens chromosome 5 clone RP11-403A7, complete sequence
          Length = 167656

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   aggaacaaactacaaaaagt 455
             ||||||||||||||||||||
Sbjct: 12459 aggaacaaactacaaaaagt 12478
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>emb|BX511226.5| Zebrafish DNA sequence from clone DKEY-41K7 in linkage group 1,
            complete sequence
          Length = 252757

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  gtatagatatttacagaaat 278
            ||||||||||||||||||||
Sbjct: 8483 gtatagatatttacagaaat 8502
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>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence
          Length = 82696

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 372  gattctgttttctgtaatgt 391
            ||||||||||||||||||||
Sbjct: 9790 gattctgttttctgtaatgt 9809
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>gb|AC108028.4| Homo sapiens BAC clone RP11-72E18 from 4, complete sequence
          Length = 25320

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  acaatgttagatagtctgta 177
            ||||||||||||||||||||
Sbjct: 7267 acaatgttagatagtctgta 7248
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>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence
          Length = 178519

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    aattatgttaagattaacat 573
              ||||||||||||||||||||
Sbjct: 107438 aattatgttaagattaacat 107419
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>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence
          Length = 204843

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    aggaacaaactacaaaaagt 455
              ||||||||||||||||||||
Sbjct: 189555 aggaacaaactacaaaaagt 189574
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>gb|AC097499.3| Homo sapiens BAC clone RP11-333J2 from 2, complete sequence
          Length = 193973

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    taatttccattcctttgatt 232
              ||||||||||||||||||||
Sbjct: 188518 taatttccattcctttgatt 188499
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>gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, complete sequence
          Length = 99901

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  tcttagtatagatatttaca 273
            ||||||||||||||||||||
Sbjct: 8655 tcttagtatagatatttaca 8674
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>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence
          Length = 152251

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 25729 atgaggtcatgtcttttgtg 25748
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>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence
          Length = 155376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 26782 atgaggtcatgtcttttgtg 26801
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>gb|AC116015.16| Homo sapiens chromosome 11, clone RP11-356D19, complete sequence
          Length = 180634

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   taatttccattcctttgatt 232
             ||||||||||||||||||||
Sbjct: 76575 taatttccattcctttgatt 76556
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>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    atgaatagtttcacttgtga 89
             ||||||||||||||||||||
Sbjct: 74262 atgaatagtttcacttgtga 74281
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>emb|CR749772.5| Zebrafish DNA sequence from clone DKEY-260P18 in linkage group 19,
             complete sequence
          Length = 91686

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   tttttacatgtaaagcataa 417
             ||||||||||||||||||||
Sbjct: 12347 tttttacatgtaaagcataa 12366
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>emb|Z75206.1|SCYOR298W S.cerevisiae chromosome XV reading frame ORF YOR298w
          Length = 3110

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 170  agtctgtaaacaacataaaggata 193
            |||||| |||||||||||||||||
Sbjct: 1533 agtctgaaaacaacataaaggata 1556
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>gb|AE003642.3| Drosophila melanogaster chromosome 2L, section 51 of 83 of the complete
             sequence
          Length = 276521

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   atttgcataaatggaaatat 249
             ||||||||||||||||||||
Sbjct: 37521 atttgcataaatggaaatat 37540
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>emb|CR760192.1| Xenopus tropicalis finished cDNA, clone TNeu117g19
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 ttagtatagatatttacaga 275
           ||||||||||||||||||||
Sbjct: 990 ttagtatagatatttacaga 971
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>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    attagcataccatatcaaat 360
              ||||||||||||||||||||
Sbjct: 185997 attagcataccatatcaaat 186016
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>dbj|AP006310.1| Homo sapiens genomic DNA, chromosome Un clone:CMF-21K2, telomere
             region, complete sequence
          Length = 33079

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 21321 atgaggtcatgtcttttgtg 21340
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>dbj|AP006223.1| Homo sapiens genomic DNA, chromosome Un, clone:CMF-101I18, telomere
             region, complete sequence
          Length = 28247

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atgaggtcatgtcttttgtg 484
             ||||||||||||||||||||
Sbjct: 21037 atgaggtcatgtcttttgtg 21056
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>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 443   aactacaaaaagtaagaattacat 466
             ||||||||||| ||||||||||||
Sbjct: 73946 aactacaaaaattaagaattacat 73923
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>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete
              sequence
          Length = 180778

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 246    atattgtttcttagtatagatatt 269
              |||||||||||||||||| |||||
Sbjct: 160145 atattgtttcttagtataaatatt 160168
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>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 176   taaacaacataaaggatatgtatt 199
             ||||||||||||| ||||||||||
Sbjct: 18728 taaacaacataaatgatatgtatt 18705
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>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete
             sequence
          Length = 195936

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   ttctgttttctgtaatgtct 393
             ||||||||||||||||||||
Sbjct: 71797 ttctgttttctgtaatgtct 71778
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>gb|U23519.2| Caenorhabditis elegans cosmid F26G1, complete sequence
          Length = 37754

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 447   acaaaaagtaagaattacat 466
             ||||||||||||||||||||
Sbjct: 23253 acaaaaagtaagaattacat 23234
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>emb|AL593858.20| Mouse DNA sequence from clone RP23-151M22 on chromosome 11, complete
             sequence
          Length = 200298

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 419   ataaactatgtttctgcaggaaca 442
             |||||| |||||||||||||||||
Sbjct: 19124 ataaaccatgtttctgcaggaaca 19101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,489,630
Number of Sequences: 3902068
Number of extensions: 7489630
Number of successful extensions: 155899
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 155623
Number of HSP's gapped (non-prelim): 276
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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