ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483122.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
2ref|XM_507279.1| PREDICTED Oryza sativa (japonica cultivar-group... 135 2e-28
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5dbj|AK111820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AK101284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
7gb|AY107214.1| Zea mays PCO100010 mRNA sequence 70 9e-09
8emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section... 46 0.13
9gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, co... 46 0.13
10gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, com... 46 0.13
11emb|X63435.1|AFSURCG A.fulgidus surC gene for adenylylsulfate re... 44 0.53
12gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 44 0.53
13gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, com... 42 2.1
14gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 8.2
15ref|XM_509290.1| PREDICTED: Pan troglodytes apoptotic protease a... 40 8.2
16ref|NM_181861.1| Homo sapiens apoptotic peptidase activating fac... 40 8.2
17ref|NM_181868.1| Homo sapiens apoptotic peptidase activating fac... 40 8.2
18ref|NM_013229.2| Homo sapiens apoptotic peptidase activating fac... 40 8.2
19ref|NM_001160.2| Homo sapiens apoptotic peptidase activating fac... 40 8.2
20gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 8.2
21gb|AC109151.9| Mus musculus chromosome 1, clone RP24-530O9, comp... 40 8.2
22gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosom... 40 8.2
23gb|AC011248.8| Homo sapiens 12 BAC RP11-14P21 (Roswell Park Canc... 40 8.2
24gb|AC110240.8| Mus musculus chromosome 3, clone RP23-113O9, comp... 40 8.2
25ref|NM_023979.1| Rattus norvegicus apoptotic peptidase activatin... 40 8.2
26emb|AL159999.15| Human DNA sequence from clone RP11-8I8 on chrom... 40 8.2
27gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, compl... 40 8.2
28emb|AJ748322.1| Sulfolobus islandicus plasmid pARN3 40 8.2
29gb|AC121161.2| Homo sapiens BAC clone RP11-781M16 from 4, comple... 40 8.2
30emb|AJ748323.1| Sulfolobus islandicus plasmid pARN4 40 8.2
31emb|AJ748321.1| Sulfolobus islandicus plasmid pKEF9 40 8.2
32gb|AC125289.1| Homo sapiens chromosome 4 clone RP11-781M16, comp... 40 8.2
33emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 i... 40 8.2
34gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, com... 40 8.2
35gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 8.2
36gb|AC015766.9| Homo sapiens chromosome 18, clone RP11-1P16, comp... 40 8.2
37gb|AC019341.6| Homo sapiens BAC clone RP11-719M18 from 4, comple... 40 8.2
38gb|AF318573.1|AF318573 Bovine herpesvirus 4 long unique region, ... 40 8.2
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
40gb|AF233440.1|AF233440 Sulfolobus islandicus plasmid pING1, comp... 40 8.2
41gb|AF320222.1|AF320222 Rattus norvegicus APAF1 (Apaf1) mRNA, com... 40 8.2
42gb|AC139933.2| Homo sapiens 3 BAC RP11-408F14 (Roswell Park Canc... 40 8.2
43ref|XM_220606.3| PREDICTED: Rattus norvegicus mannose-P-dolichol... 40 8.2
44gb|AF307108.1| Tetraodon fluviatilis STAT5 mRNA, complete cds 40 8.2
45gb|AF394166.1| Tetraodon fluviatilis STAT5 (STAT5) gene, complet... 40 8.2
46gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, co... 40 8.2
47gb|AF098891.1|HSAPAF22 Homo sapiens APAF1 gene, exon 13, 3' end 40 8.2
48dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
49dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
50dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
51emb|AJ243107.1|HSA243107 Homo sapiens mRNA for apoptotic proteas... 40 8.2
52emb|AJ243048.1|HSA243048 Homo sapiens mRNA for apoptotic proteas... 40 8.2
53emb|AJ243011.1|HSA243011 Homo sapiens mRNA for protease activati... 40 8.2
54emb|AJ243010.1|HSA243010 Homo sapiens mRNA for apoptotic proteas... 40 8.2
55emb|AJ243009.1|HSA243009 Homo sapiens mRNA for apoptotic proteas... 40 8.2
56emb|AJ243008.1|HSA243008 Homo sapiens mRNA for apoptotic proteas... 40 8.2
57emb|AJ243007.1|HSA243007 Homo sapiens mRNA for apoptotic proteas... 40 8.2
58emb|AJ243006.1|HSA243006 Homo sapiens mRNA for apoptotic proteas... 40 8.2
59emb|AJ243005.1|HSA243005 Homo sapiens mRNA for apoptotic proteas... 40 8.2
60emb|AJ243004.1|HSA243004 Homo sapiens mRNA for apoptotic proteas... 40 8.2
61emb|AJ243003.1|HSA243003 Homo sapiens mRNA for apoptotic proteas... 40 8.2
62emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 ... 40 8.2
63gb|AF134397.1|AF134397 Homo sapiens apoptotic protease activatin... 40 8.2
64gb|AF149794.1|AF149794 Homo sapiens apoptotic protease activatin... 40 8.2
65gb|AC121315.14| Mus musculus chromosome 3, clone RP24-488I7, com... 40 8.2
66gb|BC087071.1| Rattus norvegicus mannose-P-dolichol utilization ... 40 8.2
67gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 40 8.2
68gb|AF013263.1|AF013263 Homo sapiens apoptotic protease activatin... 40 8.2
69gb|U23760.1|BHU23760 Bovine herpesvirus 4 PstI fragment V and 1.... 40 8.2
70gb|BC107940.1| Rattus norvegicus cDNA clone IMAGE:7377012 40 8.2
71dbj|AB007873.2| Homo sapiens KIAA0413 mRNA, partial cds 40 8.2 
>ref|XM_483122.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2774

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                        
Query: 153  gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
            |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 2424 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 2483

                                                                        
Query: 213  tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
            ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 2484 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 2543

                                            
Query: 273  gatcactgcgtcagggtgtttgcagtccgtga 304
            ||||| || || ||||||||||  ||||||||
Sbjct: 2544 gatcattgtgtaagggtgtttgaggtccgtga 2575



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
            ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 2274 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 2331

                                                             
Query: 64   gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
            |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 2332 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 2380
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>ref|XM_507279.1| PREDICTED Oryza sativa (japonica cultivar-group), P0686H11.31 mRNA
          Length = 3206

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                        
Query: 153  gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
            |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 2534 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 2593

                                                                        
Query: 213  tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
            ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 2594 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 2653

                                            
Query: 273  gatcactgcgtcagggtgtttgcagtccgtga 304
            ||||| || || ||||||||||  ||||||||
Sbjct: 2654 gatcattgtgtaagggtgtttgaggtccgtga 2685



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
            ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 2384 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 2441

                                                             
Query: 64   gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
            |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 2442 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 2490
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 153      gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
                |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 24381200 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 24381259

                                                                            
Query: 213      tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
                ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 24381260 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 24381319

                                                
Query: 273      gatcactgcgtcagggtgtttgcagtccgtga 304
                ||||| || || ||||||||||  ||||||||
Sbjct: 24381320 gatcattgtgtaagggtgtttgaggtccgtga 24381351



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                            
Query: 4        acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
                ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 24381050 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 24381107

                                                                 
Query: 64       gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
                |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 24381108 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 24381156
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686H11
          Length = 135273

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                          
Query: 153    gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
              |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 121504 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 121563

                                                                          
Query: 213    tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
              ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 121564 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 121623

                                              
Query: 273    gatcactgcgtcagggtgtttgcagtccgtga 304
              ||||| || || ||||||||||  ||||||||
Sbjct: 121624 gatcattgtgtaagggtgtttgaggtccgtga 121655



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                          
Query: 4      acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
              ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 121354 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 121411

                                                               
Query: 64     gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
              |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 121412 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 121460
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>dbj|AK111820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011O16, full
            insert sequence
          Length = 3205

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                        
Query: 153  gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
            |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 2533 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 2592

                                                                        
Query: 213  tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
            ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 2593 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 2652

                                            
Query: 273  gatcactgcgtcagggtgtttgcagtccgtga 304
            ||||| || || ||||||||||  ||||||||
Sbjct: 2653 gatcattgtgtaagggtgtttgaggtccgtga 2684



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
            ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 2383 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 2440

                                                             
Query: 64   gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
            |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 2441 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 2489
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>dbj|AK101284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033D24, full
            insert sequence
          Length = 2774

 Score =  135 bits (68), Expect = 2e-28
 Identities = 131/152 (86%)
 Strand = Plus / Plus

                                                                        
Query: 153  gcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcaccgtctgcgg 212
            |||||||||||||| |||||||||||| ||||||| || ||||||||||||||| | |||
Sbjct: 2424 gcatgcatgctccgttttgatcctctgctgtgtcatgtatcaactgtgcaccgtttacgg 2483

                                                                        
Query: 213  tggcagaaacctgactcagctgttgagaaagcagcagttgagctagcttcttgtggagct 272
            ||||||||| |||||||| | | ||||||| ||||  |  || |||||||||||||||||
Sbjct: 2484 tggcagaaatctgactcatccgatgagaaatcagcgctacagttagcttcttgtggagct 2543

                                            
Query: 273  gatcactgcgtcagggtgtttgcagtccgtga 304
            ||||| || || ||||||||||  ||||||||
Sbjct: 2544 gatcattgtgtaagggtgtttgaggtccgtga 2575



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 93/109 (85%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                        
Query: 4    acagcattggcctggnacgggccgtgnatcgagctcgtaatgccggcattattgccgttg 63
            ||||||||||||||| || ||||||| | || ||| ||||||| |||||| | ||  |||
Sbjct: 2274 acagcattggcctgg-acaggccgtg-accgtgctagtaatgctggcattctcgctattg 2331

                                                             
Query: 64   gcatggacaatggactgatcgagctctggagtgtttcaggggggagagc 112
            |||||||||| ||| |||||||||||||||   ||||||||||||||||
Sbjct: 2332 gcatggacaacggaatgatcgagctctggaacatttcaggggggagagc 2380
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>gb|AY107214.1| Zea mays PCO100010 mRNA sequence
          Length = 593

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 62  tggcatggacaatggactgatcgagctctggagtgtttcaggggggagagctgcttcag 120
           |||||||||||| ||| |||||||||||||||| |||||||| || |||||| ||||||
Sbjct: 244 tggcatggacaacggattgatcgagctctggagcgtttcaggtggaagagcttcttcag 302



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 144 ctcaacgtcgcatgcatgctccggtttgatcctctgttgtgtcacgtgtcaactgtgcac 203
           |||| ||| |||||| |||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 311 ctcagcgtggcatgcgtgcttcgatttgaccctctcttgtgtcacgtgtcaactgttcac 370

             
Query: 204 cg 205
           ||
Sbjct: 371 cg 372
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>emb|Z99112.2|BSUB0009 Bacillus subtilis complete genome (section 9 of 21): from 1602883 to
              1807145
          Length = 204263

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 162    ctccggtttgatcctctgttgtg 184
              |||||||||||||||||||||||
Sbjct: 133548 ctccggtttgatcctctgttgtg 133526
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>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence
          Length = 180310

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 457    ttgtgagaaagagataatattgc 479
              |||||||||||||||||||||||
Sbjct: 170169 ttgtgagaaagagataatattgc 170191
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>gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, complete sequence
          Length = 144192

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 457   ttgtgagaaagagataatattgc 479
             |||||||||||||||||||||||
Sbjct: 67309 ttgtgagaaagagataatattgc 67287
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>emb|X63435.1|AFSURCG A.fulgidus surC gene for adenylylsulfate reductase
          Length = 2720

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 233 tgttgagaaagcagcagttgag 254
           ||||||||||||||||||||||
Sbjct: 703 tgttgagaaagcagcagttgag 724
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 233     tgttgagaaagcagcagttgag 254
               ||||||||||||||||||||||
Sbjct: 1499085 tgttgagaaagcagcagttgag 1499106
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>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence
          Length = 172618

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 549    ccttttcaattccatgtgtttgtgt 573
              |||||| ||||||||||||||||||
Sbjct: 117738 cctttttaattccatgtgtttgtgt 117762
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 245     agcagttgagctagcttctt 264
               ||||||||||||||||||||
Sbjct: 1095573 agcagttgagctagcttctt 1095592
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>ref|XM_509290.1| PREDICTED: Pan troglodytes apoptotic protease activating factor
            (LOC452153), mRNA
          Length = 4065

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1874 tagcttcttgtggagctgat 1893
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>ref|NM_181861.1| Homo sapiens apoptotic peptidase activating factor (APAF1),
            transcript variant 3, mRNA
          Length = 7204

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2466 tagcttcttgtggagctgat 2485
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>ref|NM_181868.1| Homo sapiens apoptotic peptidase activating factor (APAF1),
            transcript variant 4, mRNA
          Length = 7075

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2466 tagcttcttgtggagctgat 2485
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>ref|NM_013229.2| Homo sapiens apoptotic peptidase activating factor (APAF1),
            transcript variant 1, mRNA
          Length = 7171

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2433 tagcttcttgtggagctgat 2452
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>ref|NM_001160.2| Homo sapiens apoptotic peptidase activating factor (APAF1),
            transcript variant 2, mRNA
          Length = 7042

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2433 tagcttcttgtggagctgat 2452
to top
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    agctctagtggattaaaatc 410
              ||||||||||||||||||||
Sbjct: 334444 agctctagtggattaaaatc 334425
to top
>gb|AC109151.9| Mus musculus chromosome 1, clone RP24-530O9, complete sequence
          Length = 130025

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   tttgtgtggttgattgtgat 586
             ||||||||||||||||||||
Sbjct: 74250 tttgtgtggttgattgtgat 74231
to top
>gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosome 12, complete
             sequence
          Length = 151046

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   tggccttttcaattccatgt 565
             ||||||||||||||||||||
Sbjct: 57292 tggccttttcaattccatgt 57273
to top
>gb|AC011248.8| Homo sapiens 12 BAC RP11-14P21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111312

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   tagcttcttgtggagctgat 275
             ||||||||||||||||||||
Sbjct: 81384 tagcttcttgtggagctgat 81365
to top
>gb|AC110240.8| Mus musculus chromosome 3, clone RP23-113O9, complete sequence
          Length = 237590

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 215    gcagaaacctgactcagctg 234
              ||||||||||||||||||||
Sbjct: 222884 gcagaaacctgactcagctg 222903
to top
>ref|NM_023979.1| Rattus norvegicus apoptotic peptidase activating factor 1 (Apaf1),
            mRNA
          Length = 6111

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2506 tagcttcttgtggagctgat 2525
to top
>emb|AL159999.15| Human DNA sequence from clone RP11-8I8 on chromosome 9 Contains a
            phosphoribosylaminoimidazole carboxylase (PAICS)
            pseudogene and the 3' end of one variant of the ROR2 gene
            for receptor tyrosine kinase-like orphan receptor 2,
            complete sequence
          Length = 99959

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  ttccatgtgtttgtgtggtt 577
            ||||||||||||||||||||
Sbjct: 1017 ttccatgtgtttgtgtggtt 998
to top
>gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, complete sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    tttgtgtggttgattgtgat 586
              ||||||||||||||||||||
Sbjct: 180922 tttgtgtggttgattgtgat 180903
to top
>emb|AJ748322.1| Sulfolobus islandicus plasmid pARN3
          Length = 26200

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   gtgagaaagagataatattg 478
             ||||||||||||||||||||
Sbjct: 12480 gtgagaaagagataatattg 12461
to top
>gb|AC121161.2| Homo sapiens BAC clone RP11-781M16 from 4, complete sequence
          Length = 167561

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 23701 ttccatgtgtttgtgtggtt 23720
to top
>emb|AJ748323.1| Sulfolobus islandicus plasmid pARN4
          Length = 26476

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   gtgagaaagagataatattg 478
             ||||||||||||||||||||
Sbjct: 12814 gtgagaaagagataatattg 12795
to top
>emb|AJ748321.1| Sulfolobus islandicus plasmid pKEF9
          Length = 28930

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   gtgagaaagagataatattg 478
             ||||||||||||||||||||
Sbjct: 13187 gtgagaaagagataatattg 13168
to top
>gb|AC125289.1| Homo sapiens chromosome 4 clone RP11-781M16, complete sequence
          Length = 167561

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 23701 ttccatgtgtttgtgtggtt 23720
to top
>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19,
             complete sequence
          Length = 168538

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gttgaggtatttatgcaaca 326
             ||||||||||||||||||||
Sbjct: 53647 gttgaggtatttatgcaaca 53666
to top
>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence
          Length = 185819

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 78305 ttccatgtgtttgtgtggtt 78324
to top
>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 30288 ttccatgtgtttgtgtggtt 30307
to top
>gb|AC015766.9| Homo sapiens chromosome 18, clone RP11-1P16, complete sequence
          Length = 153781

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 563   tgtgtttgtgtggttgattgtgat 586
             ||||||| ||||||||||||||||
Sbjct: 79991 tgtgtttctgtggttgattgtgat 80014
to top
>gb|AC019341.6| Homo sapiens BAC clone RP11-719M18 from 4, complete sequence
          Length = 190122

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 20178 ttccatgtgtttgtgtggtt 20197
to top
>gb|AF318573.1|AF318573 Bovine herpesvirus 4 long unique region, complete sequence
          Length = 108873

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 98742 ttccatgtgtttgtgtggtt 98723
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 242      agcagcagttgagctagctt 261
                ||||||||||||||||||||
Sbjct: 18192873 agcagcagttgagctagctt 18192892



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 558     ttccatgtgtttgtgtggttgatt 581
               |||||||||||| |||||||||||
Sbjct: 3183473 ttccatgtgtttttgtggttgatt 3183450
to top
>gb|AF233440.1|AF233440 Sulfolobus islandicus plasmid pING1, complete sequence
          Length = 24554

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 459  gtgagaaagagataatattg 478
            ||||||||||||||||||||
Sbjct: 5310 gtgagaaagagataatattg 5291
to top
>gb|AF320222.1|AF320222 Rattus norvegicus APAF1 (Apaf1) mRNA, complete cds
          Length = 6111

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2506 tagcttcttgtggagctgat 2525
to top
>gb|AC139933.2| Homo sapiens 3 BAC RP11-408F14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 68488

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   ttccatgtgtttgtgtggtt 577
             ||||||||||||||||||||
Sbjct: 51386 ttccatgtgtttgtgtggtt 51367
to top
>ref|XM_220606.3| PREDICTED: Rattus norvegicus mannose-P-dolichol utilization defect
           1 (predicted) (Mpdu1_predicted), mRNA
          Length = 1304

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 240 aaagcagcagttgagctagcttct 263
           ||||||||||| ||||||||||||
Sbjct: 800 aaagcagcagtagagctagcttct 823
to top
>gb|AF307108.1| Tetraodon fluviatilis STAT5 mRNA, complete cds
          Length = 2461

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 cagctgttgagaaagcagca 248
           ||||||||||||||||||||
Sbjct: 722 cagctgttgagaaagcagca 741
to top
>gb|AF394166.1| Tetraodon fluviatilis STAT5 (STAT5) gene, complete cds
          Length = 11448

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  cagctgttgagaaagcagca 248
            ||||||||||||||||||||
Sbjct: 4610 cagctgttgagaaagcagca 4629
to top
>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence
          Length = 186744

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    ttccatgtgtttgtgtggtt 577
              ||||||||||||||||||||
Sbjct: 145199 ttccatgtgtttgtgtggtt 145218
to top
>gb|AF098891.1|HSAPAF22 Homo sapiens APAF1 gene, exon 13, 3' end
          Length = 665

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tagcttcttgtggagctgat 275
           ||||||||||||||||||||
Sbjct: 8   tagcttcttgtggagctgat 27
to top
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0419H03
          Length = 129020

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 558    ttccatgtgtttgtgtggttgatt 581
              |||||||||||| |||||||||||
Sbjct: 111627 ttccatgtgtttttgtggttgatt 111604
to top
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1103G11
          Length = 182931

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 558   ttccatgtgtttgtgtggttgatt 581
             |||||||||||| |||||||||||
Sbjct: 55660 ttccatgtgtttttgtggttgatt 55637
to top
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0047E05
          Length = 184323

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    agcagcagttgagctagctt 261
              ||||||||||||||||||||
Sbjct: 116274 agcagcagttgagctagctt 116293
to top
>emb|AJ243107.1|HSA243107 Homo sapiens mRNA for apoptotic protease activating factor-1 (Apaf-1
            gene) (short form)
          Length = 3516

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1913 tagcttcttgtggagctgat 1932
to top
>emb|AJ243048.1|HSA243048 Homo sapiens mRNA for apoptotic protease activating factor 1 (Apaf-1
            gene)
          Length = 3747

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243011.1|HSA243011 Homo sapiens mRNA for protease activating factor-1
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243010.1|HSA243010 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line Tera II
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243009.1|HSA243009 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line L 428
          Length = 3747

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243008.1|HSA243008 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line L 1236
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243007.1|HSA243007 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line KM-H2
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243006.1|HSA243006 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line Karpas 299
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243005.1|HSA243005 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line Hela
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243004.1|HSA243004 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line HDLM-2
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|AJ243003.1|HSA243003 Homo sapiens mRNA for apoptotic protease activating factor 1, cell
            line Colo 320
          Length = 3618

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19,
             complete sequence
          Length = 130807

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gttgaggtatttatgcaaca 326
             ||||||||||||||||||||
Sbjct: 47318 gttgaggtatttatgcaaca 47337
to top
>gb|AF134397.1|AF134397 Homo sapiens apoptotic protease activating factor-1 long isoform
            APAF-1L (APAF-1) mRNA, complete cds
          Length = 3714

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1856 tagcttcttgtggagctgat 1875
to top
>gb|AF149794.1|AF149794 Homo sapiens apoptotic protease activating factor 1 (APAF1) mRNA,
            complete cds
          Length = 3747

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1889 tagcttcttgtggagctgat 1908
to top
>gb|AC121315.14| Mus musculus chromosome 3, clone RP24-488I7, complete sequence
          Length = 153807

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gcagaaacctgactcagctg 234
             ||||||||||||||||||||
Sbjct: 14028 gcagaaacctgactcagctg 14047
to top
>gb|BC087071.1| Rattus norvegicus mannose-P-dolichol utilization defect 1, mRNA
           (cDNA clone IMAGE:7134167)
          Length = 1479

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 240 aaagcagcagttgagctagcttct 263
           ||||||||||| ||||||||||||
Sbjct: 948 aaagcagcagtagagctagcttct 971
to top
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     tgagcacccgcatctatttt 363
               ||||||||||||||||||||
Sbjct: 1346846 tgagcacccgcatctatttt 1346865
to top
>gb|AF013263.1|AF013263 Homo sapiens apoptotic protease activating factor 1 (Apaf-1) mRNA,
            complete cds
          Length = 7042

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 2433 tagcttcttgtggagctgat 2452
to top
>gb|U23760.1|BHU23760 Bovine herpesvirus 4 PstI fragment V and 1.7 kb of PstI fragment H
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 ttccatgtgtttgtgtggtt 577
           ||||||||||||||||||||
Sbjct: 865 ttccatgtgtttgtgtggtt 884
to top
>gb|BC107940.1| Rattus norvegicus cDNA clone IMAGE:7377012
          Length = 1517

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 240  aaagcagcagttgagctagcttct 263
            ||||||||||| ||||||||||||
Sbjct: 977  aaagcagcagtagagctagcttct 1000
to top
>dbj|AB007873.2| Homo sapiens KIAA0413 mRNA, partial cds
          Length = 6574

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  tagcttcttgtggagctgat 275
            ||||||||||||||||||||
Sbjct: 1856 tagcttcttgtggagctgat 1875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,932,856
Number of Sequences: 3902068
Number of extensions: 4932856
Number of successful extensions: 87967
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87722
Number of HSP's gapped (non-prelim): 233
length of query: 603
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 580
effective length of database: 17,143,297,704
effective search space: 9943112668320
effective search space used: 9943112668320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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