ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9p23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full insert sequence Length = 893 Score = 593 bits (299), Expect = e-166 Identities = 464/515 (90%), Gaps = 3/515 (0%) Strand = Plus / Plus Query: 68 gatccgatggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctc 127 |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| Sbjct: 147 gatccgatggccaacagcaacctcccccggcgaatcatcaaggagacgcagcgactcctc 206 Query: 128 agcgagccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaac 187 ||||||||||| ||||| || ||||| || || ||||||||||||||||| || |||||| Sbjct: 207 agcgagccagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaac 266 Query: 188 gtcatgatccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaacta 247 |||||||||||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 267 gtcatgatccttggcccggcacagtccccctatgaaggtggagtttttaagcttgaactc 326 Query: 248 tttttacccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatat 307 |||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 327 tttttacctgaggaatatcctatggctgctccaaaggttaggttcctgaccaaaatatac 386 Query: 308 catcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagt 367 || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 387 caccccaacattgacaagcttggtaggatatgccttgacattctcaaggacaaatggagc 446 Query: 368 ccggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaat 427 || || ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 447 ccagcccttcagattcggacagttcttttgagtatccaggcactcctaagtgcaccaaac 506 Query: 428 ccagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagct 487 || ||||| ||||||||||| |||||||| |||||||||||| ||||||| ||||||||| Sbjct: 507 cctgatgatcctctctctgataacattgcaaagcactggaaagccaatgaagcagaagct 566 Query: 488 gttgaaacagcgaaaggagtggacccgtctgtacgccagtggtgcatgacaaccccatgc 547 ||||||||||| |||||||||||| || ||||| ||||| ||||||| | ||||| |||| Sbjct: 567 gttgaaacagc-aaaggagtggactcgcctgtatgccagcggtgcat-aaaacccaatgc 624 Query: 548 tgctctttgatgtaataacccatcatactttagcc 582 ||| |||||||||||||| |||| |||||||| Sbjct: 625 ctctc-gtgatgtaataacccgtcatgctttagcc 658
>ref|NM_191984.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 462 Score = 573 bits (289), Expect = e-160 Identities = 419/461 (90%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||| Sbjct: 1 atggccaacagcaacctcccccggcgaatcatcaaggagacgcagcgactcctcagcgag 60 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 ||||| ||||| || ||||| || || ||||||||||||||||| || |||||||||||| Sbjct: 61 ccagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatg 120 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 |||||||| ||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||| Sbjct: 121 atccttggcccggcacagtccccctatgaaggtggagtttttaagcttgaactcttttta 180 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || ||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 181 cctgaggaatatcctatggctgctccaaaggttaggttcctgaccaaaatataccacccc 240 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 |||||||||||||||||||||||||||||||||||||||||||| |||||||| || || Sbjct: 241 aacattgacaagcttggtaggatatgccttgacattctcaaggacaaatggagcccagcc 300 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct: 301 cttcagattcggacagttcttttgagtatccaggcactcctaagtgcaccaaaccctgat 360 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || ||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||| Sbjct: 361 gatcctctctctgataacattgcaaagcactggaaagccaatgaagcagaagctgttgaa 420 Query: 494 acagcgaaaggagtggacccgtctgtacgccagtggtgcat 534 ||||| |||||||||||| || ||||| ||||| ||||||| Sbjct: 421 acagc-aaaggagtggactcgcctgtatgccagcggtgcat 460
>gb|AY109394.1| Zea mays CL6440_1 mRNA sequence Length = 1225 Score = 509 bits (257), Expect = e-141 Identities = 447/511 (87%), Gaps = 2/511 (0%) Strand = Plus / Plus Query: 67 cgatccgatggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcct 126 |||||||||||||||||||||||||||||| || |||||||||||||| ||| | || || Sbjct: 142 cgatccgatggccaacagcaacctcccgcggcggatcatcaaggagactcagcggctgct 201 Query: 127 cagcgagccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaa 186 |||||||||||| |||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 202 cagcgagccagcaccggggatcagcgcgtcgccctcggaggagaacatgcgctacttcaa 261 Query: 187 cgtcatgatccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaact 246 ||| ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 262 cgttatgatccttgggccggcgcagtcgccctatgaaggtggagnnnnnaagcttgaact 321 Query: 247 atttttacccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatata 306 ||| ||||||||||| ||||||||||||||||||||||||||||| || || || Sbjct: 322 cnnnnnacctgaggaatatccaatggctgccccaaaggttaggtttctgacaaagatcta 381 Query: 307 tcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatggag 366 |||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 382 tcatcccaacatcgacaagcttggtaggatatgcctcgacattctcaaggacaaatggag 441 Query: 367 tccggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaa 426 || || ||||||||||||||||||||||||||||| ||||| || | ||||| ||||| Sbjct: 442 cccagcacttcagattcgaacagttcttttgagtatacaggctctactgagtgcgccaaa 501 Query: 427 tccagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagc 486 |||||| |||||||| || || |||||||| |||||||||||| ||||||||| |||||| Sbjct: 502 tccagacgaccctctttcggataacattgcaaagcactggaaagccaatgaggtagaagc 561 Query: 487 tgttgaaacagcgaaaggagtggacccgtctgtacgccagtggtgcatgacaaccccatg 546 |||||||||||| ||||||||||| || ||||| || || ||||||||| ||| | || Sbjct: 562 tgttgaaacagc-taaggagtggactcgcctgtatgcgagcggtgcatgagaacgcagtg 620 Query: 547 ctgctctttgatgtaataacccatcatactt 577 || || |||||||||||||||||||||||| Sbjct: 621 atgttc-ttgatgtaataacccatcatactt 650
>gb|AY104524.1| Zea mays PCO106907 mRNA sequence Length = 780 Score = 422 bits (213), Expect = e-115 Identities = 403/465 (86%), Gaps = 1/465 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 |||||||||||||| |||||||| ||||||||||||||||||||| | || |||||||| Sbjct: 98 atggccaacagcaatctcccgcgccgaatcatcaaggagacgcagcggcttctcagcgaa 157 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 ||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 158 ccagcaccggggattagcgcgtcgccgtcggaggagaatatgcggtacttcaatgtcatg 217 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 |||||||| || |||||||| ||||| ||||| |||||||| ||||| |||||||| || Sbjct: 218 atccttggccccgcgcagtcaccctatgaaggtggagttttcaagcttgaactattcttg 277 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || ||||||||||| |||||||||||||| ||||| ||||| || ||||| || ||||| Sbjct: 278 cctgaggaatatccaatggctgccccaaaagttagatttctcacaaaaatttaccatcct 337 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 || |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 338 aatattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtccagct 397 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 |||||||| || |||||||| |||| || |||||||| | || || ||||| |||||| Sbjct: 398 cttcagatacgtacagttctactgagcattcaggcacttctgagcgccccaaacccagat 457 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || |||||||| || |||||||| || |||||||||||||| || || ||||||||||| Sbjct: 458 gatcctctctcagacaacattgcgaaacactggaaatccaacgaagctgaagctgttgag 517 Query: 494 acagcgaaaggagtggacccgtctgtacgccagtggtgcatgaca 538 |||||| ||||||||||| || |||||| | ||||| |||||||| Sbjct: 518 acagcg-aaggagtggactcgcctgtacacaagtggggcatgaca 561
>gb|DQ097726.1| Arachis hypogaea ubiquitin-conjugating enzyme 1 mRNA, complete cds Length = 700 Score = 293 bits (148), Expect = 3e-76 Identities = 358/428 (83%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||| |||||||||||||| ||| ||||||||||||| |||||| | | ||||| ||| Sbjct: 122 atggcgaacagcaacctccctcgaagaatcatcaaggaaacgcagcgtttgctcagtgag 181 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 ||||| || || ||||| |||||||| ||||| || |||||||| |||||||| || ||| Sbjct: 182 ccagcacctggaattagtgcttcgccttcggaagacaacatgcgatatttcaatgtgatg 241 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 |||||||| || | ||||| ||||| ||||| |||||||| ||| | ||||||||||| Sbjct: 242 atccttggccctactcagtcaccctatgaaggtggagttttcaagttagaactatttttg 301 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || || |||||||| |||||||| ||||||||| ||||||| || |||||||||||||| Sbjct: 302 ccagaagaatatccaatggctgctccaaaggttcggtttctaacaaaaatatatcatcca 361 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 ||||| || |||||||| |||||||| ||||| ||||| || ||||| ||||| || || Sbjct: 362 aacatcgataagcttggcaggatatgtcttgatattctgaaagataagtggagccctgcc 421 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 |||||||| || || || || |||||||||||||| || || ||||||||||| |||||| Sbjct: 422 cttcagatacgcactgtactcttgagtatccaggctctgttgagtgcaccaaacccagat 481 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || || || ||||| |||||||||||||| |||||| || ||||| || ||||||||| Sbjct: 482 gatccactatctgagaacattgccaagcattggaaaagtaacgaggccgaggctgttgaa 541 Query: 494 acagcgaa 501 || ||||| Sbjct: 542 actgcgaa 549
>gb|BT016196.1| Zea mays clone Contig29 mRNA sequence Length = 537 Score = 248 bits (125), Expect = 2e-62 Identities = 238/273 (87%), Gaps = 2/273 (0%) Strand = Plus / Minus Query: 305 tatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatgg 364 |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 524 tatcatcccaacatcgacaagcttggtaggatatgcctcgacattctcaaggacaaatgg 465 Query: 365 agtccggctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcacca 424 || || || ||||||||||||||||||||||||||||| ||||| || | ||||| ||| Sbjct: 464 agcccagcccttcagattcgaacagttcttttgagtatacaggctctactgagtgcgcca 405 Query: 425 aatccagatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaa 484 |||||||| ||||||| || || |||||||| |||| ||||||| ||||||||| |||| Sbjct: 404 aatccagactaccctctttcggataacattgcaaagccctggaaagccaatgaggtagaa 345 Query: 485 gctgttgaaacagcgaaaggagtggacccgtctgtacgccagtggtgcatgacaacccca 544 |||||||||||||| ||||||||||| || ||||| || || ||||||||| ||| | Sbjct: 344 gctgttgaaacagc-taaggagtggactcgcctgtatgcgagcggtgcatgagaacgcag 286 Query: 545 tgctgctctttgatgtaataacccatcatactt 577 || || || |||||||||||||||||||||||| Sbjct: 285 tgatgttc-ttgatgtaataacccatcatactt 254
>gb|AF091621.1| Catharanthus roseus ubiquitin-conjugating enzyme E2 (UBIE2) mRNA, complete cds Length = 794 Score = 188 bits (95), Expect = 1e-44 Identities = 336/415 (80%), Gaps = 1/415 (0%) Strand = Plus / Plus Query: 97 acgaatcatcaaggagacgcagagactcctcagcgagccagctccggggattagcgcttc 156 ||||||||| ||||| || ||| | || ||||| || ||||||||||| ||||| || || Sbjct: 111 acgaatcattaaggaaactcagcgccttctcagtgaaccagctccgggaattagtgcctc 170 Query: 157 gccctcggaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgcc 216 || || || || || |||||| |||| || |||||||| ||||||||||| || || || Sbjct: 171 accttcagaagataatatgcgggattttaatgtcatgatacttgggccggcacaatctcc 230 Query: 217 ctacgaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgc 276 || ||||| || || || ||||||||| | ||||| || || |||||||| ||||| | Sbjct: 231 atatgaaggaggtgtattcaagctggaattgtttttgcctgaagaatatccaatggcacc 290 Query: 277 cccaaaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggat 336 || |||||| | ||| ||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 291 acccaaggttcgatttttgaccaaaatataccatcctaacattgacaaactgggaaggat 350 Query: 337 atgccttgacattctcaaggataaatggagtccggctcttcagattcgaacagttctttt 396 |||||||||||||||||| || ||||||||||| || || ||||| ||||| || | | Sbjct: 351 atgccttgacattctcaaagacaaatggagtccagcactccagatacgaaccgtattgct 410 Query: 397 gagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgc 456 || ||||| || || | ||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 411 aagcatccaagctcttcttagtgctccaaatccagatgacccactttctgagaacattgc 470 Query: 457 caagcactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggac 511 || || ||||| || |||||||| || |||||||||||||| |||||| ||||| Sbjct: 471 taaacattggaagtcaaatgaggctgaggctgttgaaacagc-aaaggaatggac 524
>ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G16890 transcript variant AT1G16890.1 mRNA, complete cds Length = 804 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 286 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 345 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 346 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 405 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 406 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 465 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 466 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 525 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 526 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 584 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 585 cgcaagtggtgc 596
>ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G16890 transcript variant AT1G16890.2 mRNA, complete cds Length = 794 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 276 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 335 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 336 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 395 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 396 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 455 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 456 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 515 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 516 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 574 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 575 cgcaagtggtgc 586
>gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds Length = 462 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 148 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 207 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 208 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 267 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 268 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 327 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 328 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 387 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 388 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 446 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 447 cgcaagtggtgc 458
>gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds Length = 751 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 246 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 305 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 306 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 365 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 366 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 425 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 426 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 485 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 486 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 544 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 545 cgcaagtggtgc 556
>gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete sequence Length = 795 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 277 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 336 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 337 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 396 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 397 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 456 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 457 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 516 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 517 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 575 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 576 cgcaagtggtgc 587
>gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g16890) mRNA, complete cds Length = 462 Score = 182 bits (92), Expect = 9e-43 Identities = 258/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 148 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 207 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 208 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 267 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || || |||||| Sbjct: 268 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgctcttgagt 327 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || ||| Sbjct: 328 atccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagctaag 387 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 388 cattggaagagcaatgaggcagaagctgtggaaacagc-taaggaatggactcgtcttta 446 Query: 521 cgccagtggtgc 532 ||| |||||||| Sbjct: 447 cgcaagtggtgc 458
>ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.2 mRNA, complete cds Length = 909 Score = 174 bits (88), Expect = 2e-40 Identities = 356/444 (80%), Gaps = 1/444 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 134 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 193 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 194 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 253 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 || ||||| || | || || || || ||||| |||||||| ||| |||| || ||||| Sbjct: 254 attcttggtcctacacaatcaccttatgaaggaggagttttcaagttggagctctttttg 313 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || || ||||| || ||||| || || |||||||||||||| || || ||||| ||||| Sbjct: 314 cctgaagaataccctatggcagctcccaaggttaggtttctcacaaagatataccatcct 373 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 ||||||||||||||||| || || || ||||| ||||||||||| |||||||| || || Sbjct: 374 aacattgacaagcttggaagaatctgtcttgatattctcaaggacaaatggagccctgca 433 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 || || || |||||||| || || ||||| || || || | ||||||||||| |||||| Sbjct: 434 ctacaaatacgaacagtgctcttaagtattcaagctcttctgagtgcaccaaacccagat 493 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || || || ||||| |||||||| ||||||||||| ||||||||||||||||| || Sbjct: 494 gatccgctttctgagaacattgctaagcactggaagagtaatgaggcagaagctgtggat 553 Query: 494 acagcgaaaggagtggacccgtct 517 ||||| ||||| ||||||||||| Sbjct: 554 acagc-taaggaatggacccgtct 576
>gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete sequence Length = 778 Score = 174 bits (88), Expect = 2e-40 Identities = 356/444 (80%), Gaps = 1/444 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 134 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 193 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 194 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 253 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 || ||||| || | || || || || ||||| |||||||| ||| |||| || ||||| Sbjct: 254 attcttggtcctacacaatcaccttatgaaggaggagttttcaagttggagctctttttg 313 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || || ||||| || ||||| || || |||||||||||||| || || ||||| ||||| Sbjct: 314 cctgaagaataccctatggcagctcccaaggttaggtttctcacaaagatataccatcct 373 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 ||||||||||||||||| || || || ||||| ||||||||||| |||||||| || || Sbjct: 374 aacattgacaagcttggaagaatctgtcttgatattctcaaggacaaatggagccctgca 433 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 || || || |||||||| || || ||||| || || || | ||||||||||| |||||| Sbjct: 434 ctacaaatacgaacagtgctcttaagtattcaagctcttctgagtgcaccaaacccagat 493 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || || || ||||| |||||||| ||||||||||| ||||||||||||||||| || Sbjct: 494 gatccgctttctgagaacattgctaagcactggaagagtaatgaggcagaagctgtggat 553 Query: 494 acagcgaaaggagtggacccgtct 517 ||||| ||||| ||||||||||| Sbjct: 554 acagc-taaggaatggacccgtct 576
>gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g78870) mRNA, complete cds Length = 462 Score = 174 bits (88), Expect = 2e-40 Identities = 356/444 (80%), Gaps = 1/444 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 1 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 60 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 61 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 120 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 || ||||| || | || || || || ||||| |||||||| ||| |||| || ||||| Sbjct: 121 attcttggtcctacacaatcaccttatgaaggaggagttttcaagttggagctctttttg 180 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || || ||||| || ||||| || || |||||||||||||| || || ||||| ||||| Sbjct: 181 cctgaagaataccctatggcagctcccaaggttaggtttctcacaaagatataccatcct 240 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccggct 373 ||||||||||||||||| || || || ||||| ||||||||||| |||||||| || || Sbjct: 241 aacattgacaagcttggaagaatctgtcttgatattctcaaggacaaatggagccctgca 300 Query: 374 cttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatccagat 433 || || || |||||||| || || ||||| || || || | ||||||||||| |||||| Sbjct: 301 ctacaaatacgaacagtgctcttaagtattcaagctcttctgagtgcaccaaacccagat 360 Query: 434 gaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgttgaa 493 || || || ||||| |||||||| ||||||||||| ||||||||||||||||| || Sbjct: 361 gatccgctttctgagaacattgctaagcactggaagagtaatgaggcagaagctgtggat 420 Query: 494 acagcgaaaggagtggacccgtct 517 ||||| ||||| ||||||||||| Sbjct: 421 acagc-taaggaatggacccgtct 443
>gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At1g78870/F9K20_8) mRNA, complete cds Length = 462 Score = 170 bits (86), Expect = 3e-39 Identities = 288/354 (81%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 164 gaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgccctacgaa 223 ||||| || ||||||||||||||||| ||||| ||||| || | || || || || ||| Sbjct: 91 gaggataatatgcggtatttcaacgttatgattcttggtcctacacaatcaccttatgaa 150 Query: 224 gggggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaag 283 || |||||||| ||| |||| || ||||| || || ||||| || ||||| || || ||| Sbjct: 151 ggaggagttttcaagttggagctctttttgcctgaagaataccctatggcagctcccaag 210 Query: 284 gttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgcctt 343 ||||||||||| || || ||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 211 gttaggtttctcacaaagatataccatcctaacattgacaagcttggaagaatctgtctt 270 Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 || ||||||||||| |||||||| || || || || || |||||||| || || ||||| Sbjct: 271 gatattctcaaggacaaatggagccctgcactacaaatacgaacagtgctcttaagtatt 330 Query: 404 caggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcac 463 || || || | ||||||||||| |||||||| || || ||||| |||||||| |||||| Sbjct: 331 caagctcttctgagtgcaccaaacccagatgatccgctttctgagaacattgctaagcac 390 Query: 464 tggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtct 517 ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 391 tggaagagtaatgaggcagaagctgtggatacagc-taaggaatggacccgtct 443
>gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, complete cds Length = 757 Score = 170 bits (86), Expect = 3e-39 Identities = 288/354 (81%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 164 gaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgccctacgaa 223 ||||| || ||||||||||||||||| ||||| ||||| || | || || || || ||| Sbjct: 201 gaggataatatgcggtatttcaacgttatgattcttggtcctacacaatcaccttatgaa 260 Query: 224 gggggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaag 283 || |||||||| ||| |||| || ||||| || || ||||| || ||||| || || ||| Sbjct: 261 ggaggagttttcaagttggagctctttttgcctgaagaataccctatggcagctcccaag 320 Query: 284 gttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgcctt 343 ||||||||||| || || ||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 321 gttaggtttctcacaaagatataccatcctaacattgacaagcttggaagaatctgtctt 380 Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 || ||||||||||| |||||||| || || || || || |||||||| || || ||||| Sbjct: 381 gatattctcaaggacaaatggagccctgcactacaaatacgaacagtgctcttaagtatt 440 Query: 404 caggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcac 463 || || || | ||||||||||| |||||||| || || ||||| |||||||| |||||| Sbjct: 441 caagctcttctgagtgcaccaaacccagatgatccgctttctgagaacattgctaagcac 500 Query: 464 tggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtct 517 ||||| ||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 501 tggaagagtaatgaggcagaagctgtggatacagc-taaggaatggacccgtct 553
>emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZH04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 803 Score = 167 bits (84), Expect = 5e-38 Identities = 286/352 (81%), Gaps = 1/352 (0%) Strand = Plus / Plus Query: 164 gaggagaacatgcggtatttcaacgtcatgatccttgggccggcgcagtcgccctacgaa 223 ||||| || ||||||||||||||||| ||||| ||||| || | || || || || ||| Sbjct: 209 gaggataatatgcggtatttcaacgttatgattcttggtcctacacaatcaccttatgaa 268 Query: 224 gggggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaag 283 || |||||||| ||| |||| || ||||| || || ||||| || ||||| || || ||| Sbjct: 269 ggaggagttttcaagttggagctctttttgcctgaagaataccctatggcagcgcccaag 328 Query: 284 gttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgcctt 343 ||||||||||| || || ||||| ||||| ||||||||||||||||| || || || ||| Sbjct: 329 gttaggtttctcacaaagatataccatcctaacattgacaagcttggaagaatctgtctt 388 Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 || ||||||||||| |||||||| || || || || || ||||||||||| || ||||| Sbjct: 389 gatattctcaaggacaaatggagccctgcactacaaatacgaacagttctcttaagtatt 448 Query: 404 caggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcac 463 || || || | ||||||||||| |||||||| || || ||||| |||||||| |||||| Sbjct: 449 caagctcttctgagtgcaccaaacccagatgatccgctttctgagaacattgctaagcac 508 Query: 464 tggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgt 515 ||||| |||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 509 tggaagagtaatgaggcagaagcggtggatacagc-taaggaatggacccgt 559
>emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 745 Score = 167 bits (84), Expect = 5e-38 Identities = 256/312 (82%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 221 gaagggggagtttttaagctggaactatttttacccgaggaatatccgatggctgcccca 280 ||||| |||||||| ||| |||| || ||||| || || |||||||| ||||| || || Sbjct: 245 gaaggaggagttttcaagttggagctctttttgcctgaagaatatcctatggcagctccc 304 Query: 281 aaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgc 340 |||||||||||||| ||||| || || ||||| ||||| ||||||||||| || || ||| Sbjct: 305 aaggttaggtttctcaccaagatttaccatcctaacatcgacaagcttggaagaatctgc 364 Query: 341 cttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagt 400 |||||||| || || || || |||||||| || || || || ||||| || | |||||| Sbjct: 365 cttgacatactgaaagacaagtggagtcctgcactacaaatacgaactgtgttcttgagt 424 Query: 401 atccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaag 460 ||||| || || |||||||||||||| |||||||| ||||||||| | |||| || ||| Sbjct: 425 atccaagctcttttaagtgcaccaaacccagatgatcctctctctcagcacatagctaag 484 Query: 461 cactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtctgta 520 || ||||| |||||||||||||||||| ||||||||| ||||| ||||| ||||| || Sbjct: 485 cattggaagagcaatgaggcagaagctgtggaaacagcg-aaggaatggactcgtcttta 543 Query: 521 cgccagtggtgc 532 ||| ||| |||| Sbjct: 544 cgcaagttgtgc 555
>ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.1 mRNA, complete cds Length = 905 Score = 153 bits (77), Expect = 8e-34 Identities = 356/447 (79%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 127 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 186 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 187 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 246 Query: 194 atccttgggccggcgcagtcgccctacgaaggg---ggagtttttaagctggaactattt 250 || ||||| || | || || || || ||||| |||||||| ||| |||| || ||| Sbjct: 247 attcttggtcctacacaatcaccttatgaaggtagaggagttttcaagttggagctcttt 306 Query: 251 ttacccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcat 310 || || || ||||| || ||||| || || |||||||||||||| || || ||||| ||| Sbjct: 307 ttgcctgaagaataccctatggcagctcccaaggttaggtttctcacaaagatataccat 366 Query: 311 cccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccg 370 || ||||||||||||||||| || || || ||||| ||||||||||| |||||||| || Sbjct: 367 cctaacattgacaagcttggaagaatctgtcttgatattctcaaggacaaatggagccct 426 Query: 371 gctcttcagattcgaacagttcttttgagtatccaggcactcttaagtgcaccaaatcca 430 || || || || |||||||| || || ||||| || || || | ||||||||||| ||| Sbjct: 427 gcactacaaatacgaacagtgctcttaagtattcaagctcttctgagtgcaccaaaccca 486 Query: 431 gatgaccctctctctgaaaacattgccaagcactggaaatccaatgaggcagaagctgtt 490 ||||| || || ||||| |||||||| ||||||||||| ||||||||||||||||| Sbjct: 487 gatgatccgctttctgagaacattgctaagcactggaagagtaatgaggcagaagctgtg 546 Query: 491 gaaacagcgaaaggagtggacccgtct 517 || ||||| ||||| ||||||||||| Sbjct: 547 gatacagc-taaggaatggacccgtct 572
>emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 515 Score = 149 bits (75), Expect = 1e-32 Identities = 238/291 (81%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 227 ggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggtt 286 |||||||| ||| |||| || ||||| || || ||||| || ||||| || || |||||| Sbjct: 5 ggagttttcaagttggagctctttttgcctgaagaataccctatggcagctcccaaggtt 64 Query: 287 aggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgccttgac 346 |||||||| || || ||||| ||||| ||||||||||||||||| || || || ||||| Sbjct: 65 aggtttctcacaaagatataccatcctaacattgacaagcttggaagaatctgtcttgat 124 Query: 347 attctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatccag 406 ||||||||||| |||||||| || || || || || |||||||| || || ||||| || Sbjct: 125 attctcaaggacaaatggagccctgcactacaaatacgaacagtgctcttaagtattcaa 184 Query: 407 gcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactgg 466 || || | ||||||||||| |||||||| || || ||||| |||||||| ||||||||| Sbjct: 185 gctcttctgagtgcaccaaacccagatgatccgctttctgagaacattgctaagcactgg 244 Query: 467 aaatccaatgaggcagaagctgttgaaacagcgaaaggagtggacccgtct 517 || ||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 245 aagagtaatgaggcagaagctgtggatacagc-taaggaatggacccgtct 294
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 393 ttttgagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaaca 452 |||| ||||||||||||||| ||||||||||||| || ||||| ||||||||||| |||| Sbjct: 27662355 ttttcagtatccaggcactcctaagtgcaccaaaccctgatgatcctctctctgataaca 27662296 Query: 453 ttgccaagcactggaaatccaatgaggcagaagctgttgaaacag 497 |||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 27662295 ttgcaaagcactggaaagccaatgaagcagaagctgttgaaacag 27662251 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 324 agcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattc 383 |||||||||||||||||||||||||||||||||| |||||||| || || |||||||||| Sbjct: 27662682 agcttggtaggatatgccttgacattctcaaggacaaatggagcccagcccttcagattc 27662623 Query: 384 gaacagttcttttgag 399 | |||||||||||||| Sbjct: 27662622 ggacagttcttttgag 27662607 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 135 cagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatga 194 |||| ||||| || ||||| || || ||||||||||||||||| || ||||||||||||| Sbjct: 27664389 cagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatga 27664330 Query: 195 tccttgggccggcgcagtcgccctacgaagg 225 ||||||| ||||| ||||| ||||| ||||| Sbjct: 27664329 tccttggcccggcacagtccccctatgaagg 27664299 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 227 ggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggt 285 |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 27663647 ggagtttttaagcttgaactctttttacctgaggaatatcctatggctgctccaaaggt 27663589 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 68 gatccgatggccaacagcaacctcccgcgacgaatcatcaagg 110 |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 27664724 gatccgatggccaacagcaacctcccccggcgaatcatcaagg 27664682 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 |||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 27662803 aggttaggttcctgaccaaaatataccaccccaacattgacaag 27662760 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 108 aggagacgcagagactcctcagcgagccag 137 ||||||||||| |||||||||||||||||| Sbjct: 27664530 aggagacgcagcgactcctcagcgagccag 27664501 Score = 46.1 bits (23), Expect = 0.13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 500 aaaggagtggacccgtctgtacgccagtggtgcatgacaaccccatgctgctctttgatg 559 |||||||||||| || ||||| ||||| ||||||| | ||||| |||| ||| ||||| Sbjct: 27662158 aaaggagtggactcgcctgtatgccagcggtgcat-aaaacccaatgcctctc-gtgatg 27662101 Query: 560 taataacccatcatactttagcc 582 ||||||||| |||| |||||||| Sbjct: 27662100 taataacccgtcatgctttagcc 27662078 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaaggataaatggag 366 ||||||||||||||||| ||||| ||||||| Sbjct: 34933568 atatgccttgacattcttaaggagcaatggag 34933599
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 393 ttttgagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaaca 452 |||| ||||||||||||||| ||||||||||||| || ||||| ||||||||||| |||| Sbjct: 70921 ttttcagtatccaggcactcctaagtgcaccaaaccctgatgatcctctctctgataaca 70862 Query: 453 ttgccaagcactggaaatccaatgaggcagaagctgttgaaacag 497 |||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 70861 ttgcaaagcactggaaagccaatgaagcagaagctgttgaaacag 70817 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 324 agcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattc 383 |||||||||||||||||||||||||||||||||| |||||||| || || |||||||||| Sbjct: 71248 agcttggtaggatatgccttgacattctcaaggacaaatggagcccagcccttcagattc 71189 Query: 384 gaacagttcttttgag 399 | |||||||||||||| Sbjct: 71188 ggacagttcttttgag 71173 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 135 cagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatga 194 |||| ||||| || ||||| || || ||||||||||||||||| || ||||||||||||| Sbjct: 72955 cagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatga 72896 Query: 195 tccttgggccggcgcagtcgccctacgaagg 225 ||||||| ||||| ||||| ||||| ||||| Sbjct: 72895 tccttggcccggcacagtccccctatgaagg 72865 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 227 ggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggt 285 |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 72213 ggagtttttaagcttgaactctttttacctgaggaatatcctatggctgctccaaaggt 72155 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 68 gatccgatggccaacagcaacctcccgcgacgaatcatcaagg 110 |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 73290 gatccgatggccaacagcaacctcccccggcgaatcatcaagg 73248 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 |||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 71369 aggttaggttcctgaccaaaatataccaccccaacattgacaag 71326 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 108 aggagacgcagagactcctcagcgagccag 137 ||||||||||| |||||||||||||||||| Sbjct: 73096 aggagacgcagcgactcctcagcgagccag 73067 Score = 46.1 bits (23), Expect = 0.13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 500 aaaggagtggacccgtctgtacgccagtggtgcatgacaaccccatgctgctctttgatg 559 |||||||||||| || ||||| ||||| ||||||| | ||||| |||| ||| ||||| Sbjct: 70724 aaaggagtggactcgcctgtatgccagcggtgcat-aaaacccaatgcctctc-gtgatg 70667 Query: 560 taataacccatcatactttagcc 582 ||||||||| |||| |||||||| Sbjct: 70666 taataacccgtcatgctttagcc 70644
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 393 ttttgagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaaca 452 |||| ||||||||||||||| ||||||||||||| || ||||| ||||||||||| |||| Sbjct: 129649 ttttcagtatccaggcactcctaagtgcaccaaaccctgatgatcctctctctgataaca 129590 Query: 453 ttgccaagcactggaaatccaatgaggcagaagctgttgaaacag 497 |||| |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 129589 ttgcaaagcactggaaagccaatgaagcagaagctgttgaaacag 129545 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 324 agcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattc 383 |||||||||||||||||||||||||||||||||| |||||||| || || |||||||||| Sbjct: 129976 agcttggtaggatatgccttgacattctcaaggacaaatggagcccagcccttcagattc 129917 Query: 384 gaacagttcttttgag 399 | |||||||||||||| Sbjct: 129916 ggacagttcttttgag 129901 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 135 cagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatga 194 |||| ||||| || ||||| || || ||||||||||||||||| || ||||||||||||| Sbjct: 131683 cagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatga 131624 Query: 195 tccttgggccggcgcagtcgccctacgaagg 225 ||||||| ||||| ||||| ||||| ||||| Sbjct: 131623 tccttggcccggcacagtccccctatgaagg 131593 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 227 ggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggt 285 |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 130941 ggagtttttaagcttgaactctttttacctgaggaatatcctatggctgctccaaaggt 130883 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 68 gatccgatggccaacagcaacctcccgcgacgaatcatcaagg 110 |||||||||||||||||||||||||| || ||||||||||||| Sbjct: 132018 gatccgatggccaacagcaacctcccccggcgaatcatcaagg 131976 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 |||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 130097 aggttaggttcctgaccaaaatataccaccccaacattgacaag 130054 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 108 aggagacgcagagactcctcagcgagccag 137 ||||||||||| |||||||||||||||||| Sbjct: 131824 aggagacgcagcgactcctcagcgagccag 131795 Score = 46.1 bits (23), Expect = 0.13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 500 aaaggagtggacccgtctgtacgccagtggtgcatgacaaccccatgctgctctttgatg 559 |||||||||||| || ||||| ||||| ||||||| | ||||| |||| ||| ||||| Sbjct: 129452 aaaggagtggactcgcctgtatgccagcggtgcat-aaaacccaatgcctctc-gtgatg 129395 Query: 560 taataacccatcatactttagcc 582 ||||||||| |||| |||||||| Sbjct: 129394 taataacccgtcatgctttagcc 129372
>gb|DQ160084.1| Taraxacum officinale TO71-1 (To71-1) mRNA, partial cds Length = 260 Score = 133 bits (67), Expect = 7e-28 Identities = 173/207 (83%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 128 agcgagccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaac 187 ||||| |||||||| ||||| ||||| ||||| ||||| || |||||| |||||||||| Sbjct: 34 agcgaaccagctcctgggataagcgcatcgccatcggaagataacatgaggtatttcaat 93 Query: 188 gtcatgatccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaacta 247 |||||||||||||| || | || || || || ||||| || ||||| ||||||||| || Sbjct: 94 gtcatgatccttggtcctacacaatctccttatgaaggaggcgttttcaagctggaatta 153 Query: 248 tttttacccgaggaatatccga-tggctgccccaaaggttaggtttctgaccaaaatata 306 ||||| || || |||||||| | ||||||| || |||||| ||||||| || ||||| || Sbjct: 154 tttttgccagaagaatatccaattggctgctcccaaggttcggtttcttacaaaaatcta 213 Query: 307 tcatcccaacattgacaagcttggtag 333 || ||||||||||||||||||||||| Sbjct: 214 ccaccccaacattgacaagcttggtag 240
>ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G78870 transcript variant AT1G78870.3 mRNA, complete cds Length = 1013 Score = 121 bits (61), Expect = 3e-24 Identities = 235/293 (80%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 135 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 194 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 195 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 254 Query: 194 atccttgggccggcgcagtcgccctacgaagggggagtttttaagctggaactattttta 253 || ||||| || | || || || || ||||| |||||||| ||| |||| || ||||| Sbjct: 255 attcttggtcctacacaatcaccttatgaaggaggagttttcaagttggagctctttttg 314 Query: 254 cccgaggaatatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatccc 313 || || ||||| || ||||| || || |||||||||||||| || || ||||| ||||| Sbjct: 315 cctgaagaataccctatggcagctcccaaggttaggtttctcacaaagatataccatcct 374 Query: 314 aacattgacaagcttggtaggatatgccttgacattctcaaggataaatggag 366 ||||||||||||||||| || || || ||||| ||||||||||| |||||||| Sbjct: 375 aacattgacaagcttggaagaatctgtcttgatattctcaaggacaaatggag 427 Score = 75.8 bits (38), Expect = 1e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 416 agtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaat 475 ||||||||||| |||||||| || || ||||| |||||||| ||||||||||| ||| Sbjct: 580 agtgcaccaaacccagatgatccgctttctgagaacattgctaagcactggaagagtaat 639 Query: 476 gaggcagaagctgttgaaacagcgaaaggagtggacccgtct 517 |||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 640 gaggcagaagctgtggatacagc-taaggaatggacccgtct 680
>gb|AF165420.1| Mesembryanthemum crystallinum ubiquitin-conjugating enzyme (Ubc1) mRNA, partial cds Length = 556 Score = 115 bits (58), Expect = 2e-22 Identities = 191/234 (81%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 278 ccaaaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggata 337 |||||||||||||| ||||||| || || || || |||||||| |||||||| || ||| Sbjct: 15 ccaaaggttaggttcttgaccaagatttaccaccctaacattgataagcttggaagaata 74 Query: 338 tgccttgacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttg 397 ||||| |||||||| || ||||||||||| || ||||| ||||| ||||| || || ||| Sbjct: 75 tgcctagacattcttaaagataaatggagcccagctctgcagatccgaaccgtactattg 134 Query: 398 agtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgcc 457 || || || || || || ||||| || ||||||||||| || || || ||||||||||| Sbjct: 135 agcattcaagctcttttgagtgcccccaatccagatgatcccctttcagaaaacattgca 194 Query: 458 aagcactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggac 511 ||||| ||||| | ||||| | |||||||| |||||||| |||||| ||||| Sbjct: 195 aagcattggaagactaatgaagtcgaagctgtggaaacagc-aaaggaatggac 247
>gb|AY389757.1| Hyacinthus orientalis ubiquitin-conjugating enzyme E2 mRNA, partial cds Length = 382 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 |||||||||||||| || || || |||||||||||||| || ||| | |||||||||||| Sbjct: 23 atggccaacagcaatcttccccggcgaatcatcaaggaaacacagcgtctcctcagcgag 82 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || || || || || || || ||||||||||| ||||||||||| || |||||||||||| Sbjct: 83 cctgcgcctggaatcagtgcatcgccctcggaagagaacatgcgatacttcaacgtcatg 142 Query: 194 atccttgg 201 |||||||| Sbjct: 143 atccttgg 150
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 398 agtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgcc 457 |||||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 24150 agtatccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagct 24209 Query: 458 aagcactggaaatccaatgaggcagaagctgttgaaacag 497 ||||| ||||| |||||||||||||||||| ||||||| Sbjct: 24210 aagcattggaagagcaatgaggcagaagctgtggaaacag 24249 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 ||||||||||||| ||||| || || ||||| ||||| |||||| Sbjct: 23814 aggttaggtttctcaccaagatttaccatcctaacatcgacaag 23857
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 398 agtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaacattgcc 457 |||||||| || || |||||||||||||| |||||||| ||||| ||||| ||||| || Sbjct: 70847 agtatccaagctcttttaagtgcaccaaacccagatgatcctctgtctgagaacatagct 70906 Query: 458 aagcactggaaatccaatgaggcagaagctgttgaaacag 497 ||||| ||||| |||||||||||||||||| ||||||| Sbjct: 70907 aagcattggaagagcaatgaggcagaagctgtggaaacag 70946 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 ||||||||||||| ||||| || || ||||| ||||| |||||| Sbjct: 70511 aggttaggtttctcaccaagatttaccatcctaacatcgacaag 70554
>emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtaggatatgcc 341 ||||||||||||| || || ||||| ||||| ||||||||||||||||| || || || | Sbjct: 875 aggttaggtttctcacaaagatataccatcctaacattgacaagcttggaagaatctgtc 934 Query: 342 ttgacattctcaaggataaatggag 366 |||| ||||||||||| |||||||| Sbjct: 935 ttgatattctcaaggacaaatggag 959 Score = 75.8 bits (38), Expect = 1e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 416 agtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaat 475 ||||||||||| |||||||| || || ||||| |||||||| ||||||||||| ||| Sbjct: 1112 agtgcaccaaacccagatgatccgctttctgagaacattgctaagcactggaagagtaat 1171 Query: 476 gaggcagaagctgttgaaacagcgaaaggagtggacccgtct 517 |||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 1172 gaggcagaagctgtggatacagc-taaggaatggacccgtct 1212 Score = 48.1 bits (24), Expect = 0.032 Identities = 102/128 (79%) Strand = Plus / Plus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaaggagacgcagagactcctcagcgag 133 ||||||||||| || | |||||| ||||||||||||| || || | || ||||| || Sbjct: 94 atggccaacagtaatttgccgcgaagaatcatcaaggaaactcaacgtctgctcagtgaa 153 Query: 134 ccagctccggggattagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatg 193 || ||||| || || || || || || || ||||| || ||||||||||||||||| ||| Sbjct: 154 ccggctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatg 213 Query: 194 atccttgg 201 || ||||| Sbjct: 214 attcttgg 221
>gb|DQ306757.1| Hevea brasiliensis isolate SSH28 mRNA sequence Length = 413 Score = 81.8 bits (41), Expect = 2e-12 Identities = 102/121 (84%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 392 cttttgagtatccaggcactcttaagtgcaccaaatccagatgaccctctctctgaaaac 451 |||||||||||||| ||||| | ||||| ||||| || ||||| || || ||||| ||| Sbjct: 412 cttttgagtatccaagcacttcttagtgctccaaaccctgatgatccactttctgagaac 353 Query: 452 attgccaagcactggaaatccaatgaggcagaagctgttgaaacagcgaaaggagtggac 511 ||||| ||||| |||||| | |||||||| ||||||||||| ||||| |||||| ||||| Sbjct: 352 attgcaaagcattggaaaacgaatgaggctgaagctgttgagacagc-aaaggaatggac 294 Query: 512 c 512 | Sbjct: 293 c 293
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 413 ttaagtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactggaaatcc 472 |||||||| || || || ||||| || || ||||| |||||||||||||| |||||||| Sbjct: 15319 ttaagtgcgcctaaccctgatgatccactttctgagaacattgccaagcattggaaatct 15260 Query: 473 aatgaggcagaagctgttgaaacag 497 |||||||| || ||||||||||||| Sbjct: 15259 aatgaggccgaggctgttgaaacag 15235 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 324 agcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattc 383 ||||||| |||||||| ||||| ||||| || ||||| |||||||| || |||||||||| Sbjct: 16056 agcttggcaggatatgtcttgatattctgaaagataagtggagtcctgcacttcagattc 15997 Query: 384 gaacagttcttttgag 399 | || || |||||||| Sbjct: 15996 gtactgtacttttgag 15981 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 223 agggggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaa 282 |||||| ||||| ||||| ||||||||||| || || |||||||| |||||||| || || Sbjct: 16989 agggggtgttttcaagctagaactatttttgccagaagaatatccaatggctgctccgaa 16930 Query: 283 ggt 285 ||| Sbjct: 16929 ggt 16927 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacat 318 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 16172 aggttaggtttctgacaaaaatataccatccaaacat 16136 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 146 attagcgcttcgccctcggaggagaacatgcggtatttcaacgtcatgatccttgg 201 ||||| ||||| || ||||| || || ||||| ||||||||||| ||||||||||| Sbjct: 19476 attagtgcttccccttcggaagaaaatatgcgatatttcaacgtgatgatccttgg 19421 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 74 atggccaacagcaacctcccgcgacgaatcatcaagg 110 ||||| ||||| |||||||| ||| |||||||||||| Sbjct: 20192 atggcgaacagtaacctccctcgaagaatcatcaagg 20156
>gb|AY066206.1| Schmidtea mediterranea clone H.78.5h unknown mRNA sequence Length = 318 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 356 gataaatggagtccggctcttcagattcgaacagttcttttgagtatccaggcactctta 415 |||||||||||||| |||||||| |||||||| ||||||||| ||| ||||| || ||| Sbjct: 309 gataaatggagtcctgctcttcaaattcgaaccgttcttttgtctattcaggctctttta 250 Query: 416 agtgcaccaaatccagatga 435 ||||| || ||||| ||||| Sbjct: 249 agtgctccgaatcctgatga 230
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 311 cccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatggagtccg 370 ||||||||||||||||| || | || |||||||||||||||||||| || ||||||||| Sbjct: 281 cccaacattgacaagctcggccgaatctgccttgacattctcaaggacaagtggagtccg 340 Query: 371 gc 372 || Sbjct: 341 gc 342
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 416 agtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaat 475 ||||||||||| |||||||| || || ||||| |||||||| ||||||||||| ||| Sbjct: 25924 agtgcaccaaacccagatgatccgctttctgagaacattgctaagcactggaagagtaat 25865 Query: 476 gaggcagaagctgt 489 |||||||||||||| Sbjct: 25864 gaggcagaagctgt 25851 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 282 aggttaggtttctgaccaaaatatatcatcccaacattgacaag 325 ||||||||||||| || || ||||| ||||| |||||||||||| Sbjct: 26243 aggttaggtttctcacaaagatataccatcctaacattgacaag 26200 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 164 gaggagaacatgcggtatttcaacgtcatgatccttgg 201 ||||| || ||||||||||||||||| ||||| ||||| Sbjct: 26934 gaggataatatgcggtatttcaacgttatgattcttgg 26897
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 416 agtgcaccaaatccagatgaccctctctctgaaaacattgccaagcactggaaatccaat 475 ||||||||||| || ||||| || || ||||| |||||||||||||| ||||| || ||| Sbjct: 96044 agtgcaccaaaccctgatgatccactttctgagaacattgccaagcattggaagtctaat 95985 Query: 476 gaggcagaagctgttgaaacag 497 |||| || ||||||||||||| Sbjct: 95984 gaggtcgaggctgttgaaacag 95963 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 227 ggagtttttaagctggaactatttttacccgaggaatatccgatggctgccccaaaggt 285 |||||||||||| | ||||||||||| || || |||||||| |||||||| |||||||| Sbjct: 97700 ggagtttttaagttagaactatttttgccagaagaatatccaatggctgctccaaaggt 97642 Score = 48.1 bits (24), Expect = 0.032 Identities = 63/76 (82%) Strand = Plus / Minus Query: 324 agcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattc 383 ||||||| |||||||| || || || || || ||||| |||||||| || |||||||| | Sbjct: 96630 agcttggcaggatatgtctcgatatccttaaagataagtggagtccagcccttcagatac 96571 Query: 384 gaacagttcttttgag 399 | || ||||||||||| Sbjct: 96570 gcactgttcttttgag 96555 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 tttctgaccaaaatatatcatcccaacattga 321 ||||| || |||||||||||||| |||||||| Sbjct: 96737 tttctaacaaaaatatatcatccaaacattga 96706
>gb|AY613903.1| Mesenchytraeus solifugus clone C138 ubiquitin E2N-like mRNA, partial sequence Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 294 tgaccaaaatatatcatcccaacatt-gacaagcttggtaggatatgccttgacattctc 352 |||| |||||||||||||| || ||| |||||||||||||| ||||| || ||||| ||| Sbjct: 266 tgacaaaaatatatcatcctaatattagacaagcttggtagaatatgtctggacatactc 325 Query: 353 aaggataaatggagtcc 369 ||||| || |||||||| Sbjct: 326 aaggagaagtggagtcc 342
>emb|CT032368.1| Platynereis dumerilii EST IB0AAA39CA04EM1 Length = 877 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 294 tgaccaaaatatatcatcccaacattgacaagcttggtaggatatgccttgacattctca 353 |||| ||||| |||||||| || || || || ||||| |||||||| ||||||||||||| Sbjct: 306 tgacgaaaatttatcatcctaatatagataaacttggaaggatatgtcttgacattctca 365 Query: 354 aggataaatggagtcc 369 | || ||||||||||| Sbjct: 366 aagacaaatggagtcc 381
>emb|CT033232.1| Platynereis dumerilii EST IB0AAA24BH01EM1 Length = 950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 305 tatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatgg 364 |||||||| || || || || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 294 tatcatcctaatatagataaacttggaaggatatgtcttgacattctcaaagacaaatgg 353 Query: 365 agtcc 369 ||||| Sbjct: 354 agtcc 358
>emb|CT033086.1| Platynereis dumerilii EST IB0AAA27AC04EM1 Length = 958 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 305 tatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatgg 364 |||||||| || || || || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 297 tatcatcctaatatagataaacttggaaggatatgtcttgacattctcaaagacaaatgg 356 Query: 365 agtcc 369 ||||| Sbjct: 357 agtcc 361
>emb|CT032842.1| Platynereis dumerilii EST IB0AAA30CF01EM1 Length = 789 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 305 tatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatgg 364 |||||||| || || || || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 299 tatcatcctaatatagataaacttggaaggatatgtcttgacattctcaaagacaaatgg 358 Query: 365 agtcc 369 ||||| Sbjct: 359 agtcc 363
>emb|CT032812.1| Platynereis dumerilii EST IB0AAA31AC09EM1 Length = 901 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 305 tatcatcccaacattgacaagcttggtaggatatgccttgacattctcaaggataaatgg 364 |||||||| || || || || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 294 tatcatcctaatatagataaacttggaaggatatgtcttgacattctcaaagacaaatgg 353 Query: 365 agtcc 369 ||||| Sbjct: 354 agtcc 358
>gb|AY078063.2| Zea mays B transcriptional activator (b1) gene, b1-B' allele, exons 1 through 3 and partial cds Length = 107840 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 326 cttggtaggatatgccttgacattctcaaggataaatggagtcc 369 ||||||| ||||||||| |||||||| ||||| ||||||||||| Sbjct: 41939 cttggtatgatatgcctcgacattcttaaggagaaatggagtcc 41982
>gb|AY814881.1| Schistosoma japonicum SJCHGC06271 protein mRNA, complete cds Length = 1039 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 326 cttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagattcga 385 ||||||||||| || ||||| || || || |||||||||||||| |||||||| || || Sbjct: 319 cttggtaggatttgtcttgatatccttaaagataaatggagtcccgctcttcaaatacgc 378 Query: 386 acagttcttttgagtatccaggcactcttaagtgcaccaaatcc 429 || ||| | || |||||| ||| | ||||||||||||||||| Sbjct: 379 actgttttattatctatccaagcattattaagtgcaccaaatcc 422
>ref|XM_662316.1| Cryptosporidium hominis TU502 ubiquitin-conjugating enzyme (Chro.30262) partial mRNA Length = 453 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 276 ccccaaaggttaggtttctgaccaaaatatatcatcccaacattgacaagcttggtagga 335 ||||||| ||||||||||| || ||||| || ||||| || |||||||| ||||| || | Sbjct: 194 ccccaaaagttaggtttctaacaaaaatttaccatccaaatattgacaaacttggaagaa 253 Query: 336 tatgccttgacattctcaaggataaatggagtcc 369 | || || || ||| | || |||||||||||||| Sbjct: 254 tttgtctagatattttgaaagataaatggagtcc 287
>ref|XM_790553.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13) (LOC590968), mRNA Length = 593 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 294 tgaccaaaatatatcatcccaacattgacaagcttggtaggatatgccttgacattctca 353 |||| |||||||||||||| || ||||||| | || | ||||||||||| || |||| Sbjct: 294 tgacaaaaatatatcatccaaatgttgacaaattgggacgtatatgccttgatatactca 353 Query: 354 aggataaatggagtccggctcttcagattcgaac 387 | || |||||||| || ||||| ||||||||||| Sbjct: 354 aagacaaatggagccccgctctgcagattcgaac 387
>ref|NM_067871.3| Caenorhabditis elegans UBiquitin Conjugating enzyme family member (ubc-13) (ubc-13) mRNA, complete cds Length = 841 Score = 48.1 bits (24), Expect = 0.032 Identities = 105/132 (79%) Strand = Plus / Plus Query: 263 tatccgatggctgccccaaaggttaggtttctgaccaaaatatatcatcccaacattgac 322 |||||||||||||| || || ||| | || |||| || || |||||||| || ||||| Sbjct: 188 tatccgatggctgcaccgaaagttcgattcatgacaaagatctatcatccgaatattgat 247 Query: 323 aagcttggtaggatatgccttgacattctcaaggataaatggagtccggctcttcagatt 382 || || || || || || || || |||||||||||||||||| ||||||||||| ||| Sbjct: 248 aaactcggcagaatttgtctcgatattctcaaggataaatggtcgccggctcttcaaatt 307 Query: 383 cgaacagttctt 394 || || |||||| Sbjct: 308 cgcacggttctt 319
>gb|AF424651.1| Phytophthora infestans clone MY-07-B-10 ubiquitin-conjugating enzyme mRNA, complete cds Length = 595 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 311 cccaacattgacaagcttggtaggatatgccttgacattctcaagga 357 |||||||| |||||||||||| | || ||||| ||||| |||||||| Sbjct: 265 cccaacatcgacaagcttggtcgcatctgcctcgacatcctcaagga 311
>gb|DQ321733.1| Schistosoma mansoni ubiquitin conjugating enzyme 13 mRNA, complete cds Length = 1042 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 296 accaaaatatatcatcccaacattgacaagcttggtaggatatgccttgacattctcaag 355 |||||| |||||||||| || ||||| ||||| || || || ||||| ||||| || Sbjct: 243 accaaattatatcatccaaatattgatcgtcttggcagaatttgtcttgatattcttaaa 302 Query: 356 gataaatggagtccggctcttca 378 |||||||||||||| |||||||| Sbjct: 303 gataaatggagtcctgctcttca 325
>ref|XM_637681.1| Dictyostelium discoideum hypothetical protein (DDB0169154), partial mRNA Length = 420 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 356 gataaatggagtccggctcttcagattcgaacagttct 393 |||||||||||||| |||||||| ||| |||| ||||| Sbjct: 232 gataaatggagtccagctcttcaaattagaactgttct 269
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 356 gataaatggagtccggctcttcagattcgaacagttct 393 |||||||||||||| |||||||| ||| |||| ||||| Sbjct: 240905 gataaatggagtccagctcttcaaattagaactgttct 240942
>ref|XM_754740.1| Ustilago maydis 521 hypothetical protein (UM03686.1) partial mRNA Length = 507 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 tatcatcccaacattgacaagcttgg 330 |||||||| ||||||||||||||||| Sbjct: 223 tatcatccaaacattgacaagcttgg 248
>ref|XM_392901.2| PREDICTED: Apis mellifera similar to ENSANGP00000010475 (LOC409386), mRNA Length = 1196 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 414 taagtgcaccaaatccagatga 435 |||||||||||||||||||||| Sbjct: 630 taagtgcaccaaatccagatga 651
>gb|AC122401.3| Mus musculus chromosome 15 clone RP24-107E24, complete sequence Length = 188544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctgccccaaaggttaggtttc 293 ||||||||||||||||||||| Sbjct: 139874 ctgccccaaaggttaggtttc 139894
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 agagactcctcagcgagccagctc 140 ||||||||||||| |||||||||| Sbjct: 111746 agagactcctcagtgagccagctc 111723
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 agagactcctcagcgagccagctc 140 ||||||||||||| |||||||||| Sbjct: 161713 agagactcctcagtgagccagctc 161736
>ref|NM_001031153.1| Gallus gallus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), mRNA Length = 1961 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ccaaatccagatgaccctct 441 |||||||||||||||||||| Sbjct: 408 ccaaatccagatgaccctct 427
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaaggataaatggag 366 ||||||||||||||||| ||||| ||||||| Sbjct: 250 atatgccttgacattcttaaggagcaatggag 281
>gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaa 354 |||||||||||||||||||| Sbjct: 350 atatgccttgacattctcaa 369
>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence Length = 160498 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 gaccaaaatatatcatcccaacat 318 ||||||||||| |||||||||||| Sbjct: 49133 gaccaaaatatttcatcccaacat 49110
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 gaccaaaatatatcatcccaacat 318 ||||||||||| |||||||||||| Sbjct: 665462 gaccaaaatatttcatcccaacat 665439
>gb|AC092245.2| Drosophila melanogaster clone BACR32C03, complete sequence Length = 128623 Score = 40.1 bits (20), Expect = 7.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 ||||| || ||||||||||||||||| ||| | || ||||| || |||||| | ||| Sbjct: 80511 gacatcctgaaggataaatggagtcctgctttgcaaattcgtaccgttcttctttcgatc 80570 Query: 404 caggcactcttaagtgcaccaaatccagatga 435 ||||| || || ||||| ||||| |||||||| Sbjct: 80571 caggccctgttgagtgctccaaacccagatga 80602
>gb|DQ443216.1| Bombyx mori ubiquitin conjugating enzyme E2 mRNA, complete cds Length = 1373 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 344 gacattctcaaggataaatggagtccggctct 375 |||||||| || |||||||||||||| ||||| Sbjct: 497 gacattcttaaagataaatggagtccagctct 528 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 aaggttaggtttctgaccaaaatatatcatcc 312 |||||||||||| | || |||||||||||||| Sbjct: 434 aaggttaggtttatcacgaaaatatatcatcc 465
>gb|BT012849.1| Lycopersicon esculentum clone 113927F, mRNA sequence Length = 1269 Score = 40.1 bits (20), Expect = 7.9 Identities = 39/44 (88%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 277 cccaaaggttaggtttctgaccaaaatatatcatcccaacattg 320 ||||||||||| ||||||||||| || | |||||||||||||| Sbjct: 540 cccaaaggttat-tttctgaccaagatttttcatcccaacattg 582
>ref|XM_946508.1| Trypanosoma brucei TREU927 ubiquitin-conjugating enzyme (Tb927.2.3720) partial mRNA Length = 756 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 gaccaaaatatatcatcccaacat 318 ||||||||||| |||||||||||| Sbjct: 222 gaccaaaatatttcatcccaacat 245
>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete sequence Length = 216044 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gatgaccctctctctgaaaa 450 |||||||||||||||||||| Sbjct: 53074 gatgaccctctctctgaaaa 53093
>gb|BC043757.1| Xenopus laevis hypothetical protein MGC52908, mRNA (cDNA clone MGC:52908 IMAGE:4889409), complete cds Length = 1931 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 aagtgcaccaaatccagatg 434 |||||||||||||||||||| Sbjct: 640 aagtgcaccaaatccagatg 659
>ref|XM_949168.1| Theileria annulata strain Ankara ubiquitin-conjugating enzyme E2 (TA20510) partial mRNA Length = 459 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 338 tgccttgacattctcaaggataaatggagtcc 369 ||||| |||||||||||||| || |||||||| Sbjct: 253 tgcctcgacattctcaaggacaagtggagtcc 284
>gb|AY135220.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tgccttgacattctcaagga 357 |||||||||||||||||||| Sbjct: 363 tgccttgacattctcaagga 382
>ref|XM_501290.1| Yarrowia lipolytica CLIB122, YALI0C00561g predicted mRNA Length = 453 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 tttctgaccaaaatatatcatcccaacattga 321 |||||||||||||| || || ||||||||||| Sbjct: 211 tttctgaccaaaatctaccaccccaacattga 242
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tttttaagctggaactattt 250 |||||||||||||||||||| Sbjct: 235236 tttttaagctggaactattt 235255
>emb|AJ719875.1| Gallus gallus mRNA for hypothetical protein, clone 7i20 Length = 1990 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ccaaatccagatgaccctct 441 |||||||||||||||||||| Sbjct: 408 ccaaatccagatgaccctct 427
>gb|AY736121.1| Triticum aestivum ubiquitin-conjugating enzyme mRNA, complete cds Length = 460 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tgccttgacattctcaagga 357 |||||||||||||||||||| Sbjct: 263 tgccttgacattctcaagga 282
>gb|AC114766.5| Homo sapiens BAC clone RP11-393M11 from 4, complete sequence Length = 77880 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 atggccaacagcaacctccc 93 |||||||||||||||||||| Sbjct: 38137 atggccaacagcaacctccc 38118
>gb|AY113266.1| Drosophila melanogaster AT16033 full insert cDNA Length = 592 Score = 40.1 bits (20), Expect = 7.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 ||||| || ||||||||||||||||| ||| | || ||||| || |||||| | ||| Sbjct: 333 gacatcctgaaggataaatggagtcctgctttgcaaattcgtaccgttcttctttcgatc 392 Query: 404 caggcactcttaagtgcaccaaatccagatga 435 ||||| || || ||||| ||||| |||||||| Sbjct: 393 caggccctgttgagtgctccaaacccagatga 424
>ref|NM_135871.2| Drosophila melanogaster CG3473-RA (CG3473), mRNA Length = 655 Score = 40.1 bits (20), Expect = 7.9 Identities = 74/92 (80%) Strand = Plus / Plus Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 ||||| || ||||||||||||||||| ||| | || ||||| || |||||| | ||| Sbjct: 412 gacatcctgaaggataaatggagtcctgctttgcaaattcgtaccgttcttctttcgatc 471 Query: 404 caggcactcttaagtgcaccaaatccagatga 435 ||||| || || ||||| ||||| |||||||| Sbjct: 472 caggccctgttgagtgctccaaacccagatga 503
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 ccaaatccagatgaccctctctct 445 ||||||||||| |||||||||||| Sbjct: 1039054 ccaaatccagaagaccctctctct 1039031
>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete sequence Length = 190127 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 tgacaagcttggtaggatat 338 |||||||||||||||||||| Sbjct: 44498 tgacaagcttggtaggatat 44517
>gb|AC068324.8|AC068324 Arabidopsis thaliana chromosome 1 BAC F13A11 genomic sequence, complete sequence Length = 95173 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 aagggggagtttttaagctg 241 |||||||||||||||||||| Sbjct: 60484 aagggggagtttttaagctg 60503
>gb|AC133505.3| Mus musculus BAC clone RP24-176M20 from chromosome 16, complete sequence Length = 149947 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tgacaagcttggtaggatat 338 |||||||||||||||||||| Sbjct: 22090 tgacaagcttggtaggatat 22071
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaaggataaatggag 366 ||||||||||||||||| ||||| ||||||| Sbjct: 62932 atatgccttgacattcttaaggagcaatggag 62963
>dbj|AK174260.1| Ciona intestinalis cDNA, clone:cicl015i02, full insert sequence Length = 833 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ccaaatccagatgaccctct 441 |||||||||||||||||||| Sbjct: 434 ccaaatccagatgaccctct 453
>emb|AL954697.15| Zebrafish DNA sequence from clone CH211-286K11 in linkage group 25, complete sequence Length = 134798 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 tgctgctctttgatgtaata 564 |||||||||||||||||||| Sbjct: 41690 tgctgctctttgatgtaata 41671
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 aagggggagtttttaagctg 241 |||||||||||||||||||| Sbjct: 15865 aagggggagtttttaagctg 15846
>emb|CR936403.5| Zebrafish DNA sequence from clone CH211-4L14 in linkage group 18, complete sequence Length = 58411 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccctcggaggagaacatgc 176 |||||||||||||||||||| Sbjct: 21158 gccctcggaggagaacatgc 21139
>gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaa 354 |||||||||||||||||||| Sbjct: 387 atatgccttgacattctcaa 406
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 40.1 bits (20), Expect = 7.9 Identities = 74/92 (80%) Strand = Plus / Minus Query: 344 gacattctcaaggataaatggagtccggctcttcagattcgaacagttcttttgagtatc 403 ||||| || ||||||||||||||||| ||| | || ||||| || |||||| | ||| Sbjct: 92564 gacatcctgaaggataaatggagtcctgctttgcaaattcgtaccgttcttctttcgatc 92505 Query: 404 caggcactcttaagtgcaccaaatccagatga 435 ||||| || || ||||| ||||| |||||||| Sbjct: 92504 caggccctgttgagtgctccaaacccagatga 92473
>gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 atatgccttgacattctcaa 354 |||||||||||||||||||| Sbjct: 290 atatgccttgacattctcaa 309
>gb|BC110944.1| Xenopus laevis cDNA clone MGC:132133 IMAGE:6638005, complete cds Length = 1954 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 aagtgcaccaaatccagatg 434 |||||||||||||||||||| Sbjct: 651 aagtgcaccaaatccagatg 670
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 290 tttctgaccaaaatatatcatcccaacattga 321 |||||||||||||| || || ||||||||||| Sbjct: 76751 tttctgaccaaaatctaccaccccaacattga 76782 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,134,865 Number of Sequences: 3902068 Number of extensions: 4134865 Number of successful extensions: 102823 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 102509 Number of HSP's gapped (non-prelim): 289 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
