>SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1278

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 171  DPLLCHVSTVHRLRWQKPDSAVEKAAVELASCGADHCVRVFAVRDS 308
            D + CH++       QKP +A++ AA  L +   DH +RVF + DS
Sbjct: 1063 DTVACHLTHTVPCAHQKPITALKAAAGRLVTGSQDHTLRVFRLEDS 1108

>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)|
          Length = 821

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
 Frame = +3

Query: 51  IIAVGMDNGLIELWSVXXXXXXXXXXXXXXPLNVACMLRFDPLLCHVSTVHRLRWQKPDS 230
           I+AVG+++G I ++S                      +   P   H   + RL W+    
Sbjct: 737 IVAVGLESGKICIYSWSKTNQETKDWTS--------CVETTPSQSHTLGIRRLCWKSCSG 788

Query: 231 AVEKAA-----VELASCGADHCVRVFAV 299
           + E++      ++ ASCG DH V+++ V
Sbjct: 789 STEQSEEGTEWLDFASCGEDHTVKIYRV 816

>SCAP_CRIGR (P97260) Sterol regulatory element-binding protein|
            cleavage-activating protein (SREBP cleavage-activating
            protein) (SCAP)
          Length = 1276

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 183  CHVSTVHRLRWQKPDSAVEKAAVELASCGADHCVRVFAVRDS 308
            CH++       QKP +A+  AA  L +   DH +RVF + DS
Sbjct: 1065 CHLTHTVPCAHQKPITALRAAAGRLVTGSQDHTLRVFRLEDS 1106

>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 259

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +2

Query: 2   SQHWPGTGRXXXXXCRH---YCRWHGQWTDRALEC 97
           +QHWP T       C+    Y   HG W DRA +C
Sbjct: 45  TQHWPPTVCKEVNSCQDSLDYWTIHGLWPDRAEDC 79

>WDR46_HUMAN (O15213) WD-repeat protein 46 (WD-repeat protein BING4)|
          Length = 610

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
 Frame = +3

Query: 51  IIAVGMDNGLIELWSVXXXXXXXXXXXXXXPLNVACMLRFDPLLCHVSTVHRLRWQKPDS 230
           +I +G  NG + LWS                   A       +LCH   V  +       
Sbjct: 331 VIHLGHSNGTVSLWS------------------PAMKEPLAKILCHRGGVRAV------- 365

Query: 231 AVEKAAVELASCGADHCVRVFAVRDS*GIYATL*LRNFEH--PHL-FSQQDI 377
           AV+     +A+ G DH +++F +R   G Y  L  R   H   HL FSQ+ +
Sbjct: 366 AVDSTGTYMATSGLDHQLKIFDLR---GTYQPLSTRTLPHGAGHLAFSQRGL 414


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,541,664
Number of Sequences: 219361
Number of extensions: 1453972
Number of successful extensions: 3465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3460
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)