ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9n02 |
|---|---|
| Clone Library Name | barley_pub |
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -2 Query: 247 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 147 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 194
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -2 Query: 247 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 302 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 349
>RNP2_ARATH (Q6AWV1) Probable ribonuclease P protein subunit 2 (EC 3.1.26.5)| Length = 151 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 212 VYVNWGDCSLGVYHGVHFQFFVSFFCVAHICLKRRIRTEHSMAWL 346 + VN+G+C LG G +V+ + +C+ R R EH WL Sbjct: 43 ILVNFGECGLGSSLGSFQVKYVN--PITKLCIVRSSREEHRQVWL 85
>IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico) (dIRS)| Length = 968 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = -2 Query: 274 KKLKMD---TVVHTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEE 146 +KLK+ T AT +P+H I T IS KW + S EE Sbjct: 663 EKLKLSDYQTAPPLTATAAPVHDLNKISTYNISAEKWREQPSRSEE 708
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -1 Query: 245 HPGYSLPNSHTQAHTYPSDQLP 180 HP + +P SH Q YP Q+P Sbjct: 461 HPQFMVPPSHQQQQAYPPPQMP 482
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -2 Query: 274 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 103 YVLCKKKMVL 74 Y KK + + Sbjct: 2278 YEAEKKGLTM 2287
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -2 Query: 274 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 103 YVLCKKKMVL 74 Y KK + + Sbjct: 2278 YEAEKKGLTM 2287
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -2 Query: 274 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 103 YVLCKKKMVL 74 Y KK + + Sbjct: 2278 YEAEKKVLTM 2287
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -2 Query: 220 HIHKHIHTPRISYPKWHQSSSH--PEESAARGAEQAMA 113 H H H H P S+P+ Q+ +H P A+ GA A Sbjct: 59 HSHSHPHQPIPSHPQEQQAKNHCSPSHQASGGATAGAA 96
>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein) Length = 2476 Score = 28.1 bits (61), Expect = 5.2 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = -2 Query: 274 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 104 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2205 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2260 Query: 103 YVLCKKKMVL 74 Y KK + + Sbjct: 2261 YEAEKKGLTM 2270
>CLDND_MOUSE (Q9CQX5) Claudin domain-containing protein 1| Length = 253 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 97 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 219 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>CLDND_HUMAN (Q9NY35) Claudin domain-containing protein 1 (Membrane protein| GENX-3745) Length = 253 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 97 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 219 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -1 Query: 245 HPGYSLPNSHTQAHTY 198 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein| Length = 444 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -1 Query: 245 HPGYSLPNSHTQAHTY 198 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>ORAI1_RAT (Q5M848) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -2 Query: 196 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 80 P +SYP W S S + QA++W++ L + K+ Sbjct: 49 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 87
>ORAI1_MOUSE (Q8BWG9) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -2 Query: 196 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 80 P +SYP W S S + QA++W++ L + K+ Sbjct: 50 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 88
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -2 Query: 241 QATVS-PIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAM 116 QA++S +H H+ + +P S + QSS+HP + ++ +QA+ Sbjct: 179 QASLSYTVHPHQMLISPNGSQQQQSQSSTHPHQLQSQHMQQAL 221
>UVP1_ECOLI (P18957) Protein uvp1| Length = 198 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -1 Query: 239 GYSLPNSHTQAHTYPSDQLPKMAPKQLTP*RIGSSG-RRAGNGVARI--CIMQEEDGASL 69 GY+ ++H Q T+ D+L K +Q+ +I G +RA NG + C+ +G +L Sbjct: 4 GYARKSTHLQDVTHQVDELTKAGCEQIYHEQISRGGSKRAKNGAPELENCLKALREGDTL 63
>TEGU_HCMV (P07387) Tegument protein (67 kDa phosphorylated protein)| Length = 549 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 308 LDICVRHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPS 192 +D C K ++ + R T SLPN++TQ H +PS Sbjct: 334 IDRCEFVGKKRRCMMHNDRETGDCSSLPNANTQTHRFPS 372
>IL1B_CEREL (P51745) Interleukin-1 beta precursor (IL-1 beta)| Length = 266 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -2 Query: 190 ISYPKWHQSSSHPEE 146 + YP W+ S+SHPEE Sbjct: 228 VLYPNWYISTSHPEE 242
>FUBP2_HUMAN (Q92945) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (p75) Length = 707 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -2 Query: 187 SYPKWHQSSSH-PEESAARGAEQAMAWQEY 101 +YP+W + H P ++AA A+ AW Y Sbjct: 548 TYPQWQPPAPHDPSKAAAAAADPNAAWAAY 577
>RL32_METKA (Q8TW13) 50S ribosomal protein L32e| Length = 131 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = -1 Query: 293 RHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPSDQLPKMAPKQL 159 RH KM++K ++ + +PGY P H +++ PK L Sbjct: 49 RHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDL 93
>PDUU_SALTY (P0A1D1) Propanediol utilization protein pduU| Length = 116 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +1 Query: 37 EQQPTGGQXAVRLAPSSSCII-HILATPLPALRPELPILQGVSCFGAILGS*SEGYVCAC 213 E+QPT + P + H++A P L +L + VS G + + SE + AC Sbjct: 2 ERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIAC 61
>PDUU_SALTI (P0A1D2) Propanediol utilization protein pduU| Length = 116 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +1 Query: 37 EQQPTGGQXAVRLAPSSSCII-HILATPLPALRPELPILQGVSCFGAILGS*SEGYVCAC 213 E+QPT + P + H++A P L +L + VS G + + SE + AC Sbjct: 2 ERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIAC 61
>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2| Length = 769 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = -2 Query: 187 SYPKWHQSSSHPEESAARGAEQAMAWQEY 101 +YP+W + H AA A+ AW Y Sbjct: 609 TYPQWQPPAPHDPSKAAAAADPNAAWAGY 637 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,489,944 Number of Sequences: 219361 Number of extensions: 1302574 Number of successful extensions: 3469 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3352 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3468 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
