ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9p16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009392.1| Triticum aestivum clone wlm96.pk037.f18:fis, full insert mRNA sequence Length = 1654 Score = 1015 bits (512), Expect = 0.0 Identities = 589/612 (96%), Gaps = 2/612 (0%) Strand = Plus / Plus Query: 1 cacggcttgttgccaacccgggnatgttatcccacgtctattcagctccctcttgttcct 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 734 cacggcttgttgccaacccggg-atgttatcccacgtctattcagctccctcttgttcct 792 Query: 61 ctcataaaggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggta 120 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 793 ctaataaaggcaaaactgatcaagctgagcaatataataattgatgcaaaatctggggtt 852 Query: 121 actggagcaggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcat 180 || || ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 853 accggggcaggacgtggagctaaggaagcaaatctgtacaccgag-atagctgaaggcat 911 Query: 181 tcatgcttatggaataaaaggccaccggcatgttcccgaggttgaacaaggattgtcaga 240 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 912 tcatgcttatggaataaaaggccaccgtcatgttcctgaggttgaacaaggattgtcaga 971 Query: 241 ggctgctcagtccaaagttactatcagcttcactccaaatcttatctgcatgaaacgtgg 300 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 ggctgctgaatccaaagttactatcagcttcactccaaatcttatctgcatgaaacgtgg 1031 Query: 301 catgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtgatttgtatca 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 gatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtgatttgtatca 1091 Query: 361 gcatctgaagtctacttatgagggtgaagaatttgtgaagttgttaaatgacagcaatgt 420 |||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| Sbjct: 1092 gcatctcaagtctacttatgagggtgaagaatttgtcaagctgttaaatggcagcaatgt 1151 Query: 421 tcctcacacacgccatgttgttggatcgaattactgcttcatgaatgtcttcgaggacag 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1152 tcctcacacacgccatgttgttggatcaaattactgcttcatgaatgtcttcgaggacag 1211 Query: 481 aattcccggaagggccatcatcatctctgtcatagacaatcttgtgaagggggcatctgg 540 |||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1212 aattcctggaagggcaatcatcatctctgtcatagacaatcttgtaaagggagcatctgg 1271 Query: 541 ccaggccgtgcagaacctcaatctgatgatgggactgcctgagaacatgggactgcaata 600 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1272 ccaggccgtgcagaacctcaatctgatgatgggactgcctgagaacatggggctgcaata 1331 Query: 601 tcagcccctatt 612 |||||||||||| Sbjct: 1332 tcagcccctatt 1343
>dbj|AK071544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100D05, full insert sequence Length = 1901 Score = 698 bits (352), Expect = 0.0 Identities = 549/612 (89%), Gaps = 2/612 (0%) Strand = Plus / Plus Query: 1 cacggcttgttgccaacccgggnatgttatcccacgtctattcagctccctcttgttcct 60 ||||||||||||| || ||||| |||||||||||| |||||||| || |||||||||||| Sbjct: 895 cacggcttgttgcaaatccggg-atgttatcccacatctattcaacttcctcttgttcct 953 Query: 61 ctcataaaggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggta 120 || |||||||||||||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 954 ctaataaaggcaaaactgatcaaagtgagcaacattatcattgatgcaaaatctggggtt 1013 Query: 121 actggagcaggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcat 180 | ||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| Sbjct: 1014 agtggggcaggacgtggagctaaggaagccaatctctacaccgag-atagctgaaggcat 1072 Query: 181 tcatgcttatggaataaaaggccaccggcatgttcccgaggttgaacaaggattgtcaga 240 |||||||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||| Sbjct: 1073 tcatgcttatggaataaaaggccaccggcatgttcctgagattgaacaaggactttcaga 1132 Query: 241 ggctgctcagtccaaagttactatcagcttcactccaaatcttatctgcatgaaacgtgg 300 ||||||| |||| ||||| ||||||||||| ||||||||||| || || ||||||||||| Sbjct: 1133 ggctgctgagtctaaagtcactatcagctttactccaaatctgatttgtatgaaacgtgg 1192 Query: 301 catgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtgatttgtatca 360 ||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| Sbjct: 1193 gatgcaatctactatgttcgttgaaatggcacctggagtgactgccaatgatttgtatca 1252 Query: 361 gcatctgaagtctacttatgagggtgaagaatttgtgaagttgttaaatgacagcaatgt 420 |||||| |||||||| ||||||||||||||||||||||| ||||||||| |||| || Sbjct: 1253 gcatctcaagtctacatatgagggtgaagaatttgtgaaactgttaaatggtagcagcgt 1312 Query: 421 tcctcacacacgccatgttgttggatcgaattactgcttcatgaatgtcttcgaggacag 480 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 1313 tcctcacacacgccatgttgtgggatcaaattactgcttcatgaatgtctttgaggacag 1372 Query: 481 aattcccggaagggccatcatcatctctgtcatagacaatcttgtgaagggggcatctgg 540 |||||| ||| | ||||||||||| ||||| ||||| |||||||||||||| ||||| || Sbjct: 1373 aattcctggacgtgccatcatcatatctgttatagataatcttgtgaagggagcatcagg 1432 Query: 541 ccaggccgtgcagaacctcaatctgatgatgggactgcctgagaacatgggactgcaata 600 ||||| || |||||||| |||||||||||||| ||||| ||||||| || |||||||| Sbjct: 1433 tcaggctgttcagaaccttaatctgatgatgggtctgccagagaacactgggctgcaata 1492 Query: 601 tcagcccctatt 612 ||| |||||||| Sbjct: 1493 tcaacccctatt 1504
>ref|NM_197149.1| Oryza sativa (japonica cultivar-group) putative N-acetyl-gamma-glutamyl-phosphate reductase (OSJNBa0041P03.17), mRNA Length = 1251 Score = 684 bits (345), Expect = 0.0 Identities = 529/589 (89%), Gaps = 1/589 (0%) Strand = Plus / Plus Query: 24 atgttatcccacgtctattcagctccctcttgttcctctcataaaggcaaaactgatcaa 83 |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 657 atgttatcccacatctattcagcttcctcttgttcctctgataaaggcaaaactgatcaa 716 Query: 84 gctgagcaatataataattgatgcaaaatccggggtaactggagcaggacgtggagctaa 143 ||||||||| || || |||||||||||||| ||||| |||||||||||||||||| || Sbjct: 717 gctgagcaacattatcattgatgcaaaatctggggtttgtggagcaggacgtggagcgaa 776 Query: 144 ggaagcaaatctttacaccgagnatagctgaaggcattcatgcttatggaataaaaggcc 203 ||| || ||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 777 ggaggcgaatctttacactgag-atagctgaaggcatccatgcttatggaataaaaggcc 835 Query: 204 accggcatgttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttacta 263 |||| |||| ||||||| ||||||||||| | |||||||||||| | || ||||| |||| Sbjct: 836 accgtcatgctcccgagattgaacaaggactttcagaggctgctaaatctaaagtcacta 895 Query: 264 tcagcttcactccaaatcttatctgcatgaaacgtggcatgcaatctactatgtttgttg 323 |||| || ||||||||||| ||||| ||||||||||| ||||||||||| |||||||||| Sbjct: 896 tcagttttactccaaatctgatctgtatgaaacgtggaatgcaatctaccatgtttgttg 955 Query: 324 aaatggcacctggagtgactgtcagtgatttgtatcagcatctgaagtctacttatgagg 383 ||||||||||||||||||||| | |||||||||| |||||||| |||||||||||||||| Sbjct: 956 aaatggcacctggagtgactgccggtgatttgtaccagcatctcaagtctacttatgagg 1015 Query: 384 gtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttgttg 443 | ||||| ||||| ||| | ||| ||| ||||| |||||||||||| |||||||| || | Sbjct: 1016 gcgaagagtttgtcaagcttttacatggcagcactgttcctcacacgcgccatgtcgtgg 1075 Query: 444 gatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatcatca 503 |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1076 gatcaaattactgcttcatgaatgtcttcgaggacaggattcctggaagggccatcatca 1135 Query: 504 tctctgtcatagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatc 563 ||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||||||||| Sbjct: 1136 tctctgttatagataatcttgtgaagggagcgtctggtcaggctgtccagaacctcaatc 1195 Query: 564 tgatgatgggactgcctgagaacatgggactgcaatatcagcccctatt 612 |||||||||| ||||||||||||| || |||||||||||||||||||| Sbjct: 1196 tgatgatgggcctgcctgagaacagagggctgcaatatcagcccctatt 1244
>gb|AY108206.1| Zea mays PCO093732 mRNA sequence Length = 1830 Score = 456 bits (230), Expect = e-125 Identities = 497/585 (84%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 25 tgttatcccacgtctattcagctccctcttgttcctctcataaaggcaaaactgatcaag 84 ||||||||||| |||||||| || || || |||||| | |||||||||||||||||||| Sbjct: 903 tgttatcccacatctattcaacttccgctcgttcctttggtaaaggcaaaactgatcaag 962 Query: 85 ctgagcaatataataattgatgcaaaatccggggtaactggagcaggacgtggagctaag 144 || | ||| || || |||||||||||||| || || | ||| ||||||||||| |||||| Sbjct: 963 ctaaccaacattattattgatgcaaaatctggagtcagtggtgcaggacgtggggctaag 1022 Query: 145 gaagcaaatctttacaccgagnatagctgaaggcattcatgcttatggaataaaaggcca 204 ||||||||||||||||| || || ||||| || || ||||||||||| |||| | |||| Sbjct: 1023 gaagcaaatctttacactga-aatcgctgagggtatccatgcttatgggataacaagcca 1081 Query: 205 ccggcatgttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactat 264 |||||||| || ||| |||| |||||| | |||| |||||| | || ||||||||||| Sbjct: 1082 tcggcatgtgcctgagattgagcaaggacttacagatgctgctgaatcaaaagttactat 1141 Query: 265 cagcttcactccaaatcttatctgcatgaaacgtggcatgcaatctactatgtttgttga 324 |||||| |||||| || | || || ||||||||||| |||||||||||| ||| |||||| Sbjct: 1142 cagctttactccacatttgatgtgtatgaaacgtgggatgcaatctactgtgtatgttga 1201 Query: 325 aatggcacctggagtgactgtcagtgatttgtatcagcatctgaagtctacttatgaggg 384 | ||||| ||||||||||| ||| ||||||||| | || || ||||||||||| ||| Sbjct: 1202 attggcatctggagtgactcccagggatttgtatgaacacctaaagtctacttacgagaa 1261 Query: 385 tgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttgttgg 444 |||||||||||| ||| ||||| ||| |||||||||||| |||| |||||||||| || Sbjct: 1262 tgaagaatttgtcaagctgttacatggtagcaatgttccttgcacaagccatgttgtggg 1321 Query: 445 atcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatcatcat 504 ||| |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 1322 atcaaattactgcttcatgaatgtctatgaggatagaatacctggaagggccatcatcat 1381 Query: 505 ctctgtcatagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatct 564 |||||||||||| |||||||||||||| |||||||| ||||| |||| || || ||||| Sbjct: 1382 ctctgtcatagataatcttgtgaagggagcatctggtcaggctttgcaaaatcttaatct 1441 Query: 565 gatgatgggactgcctgagaacatgggactgcaatatcagcccct 609 ||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct: 1442 gatgatgggactgcctgagaatatggggctgcaataccagcccct 1486
>gb|BT017894.1| Zea mays clone EL01N0515C03.c mRNA sequence Length = 1436 Score = 424 bits (214), Expect = e-115 Identities = 493/585 (84%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 25 tgttatcccacgtctattcagctccctcttgttcctctcataaaggcaaaactgatcaag 84 ||||||||||| |||||||| || || || |||||| | |||||||||||||||||||| Sbjct: 464 tgttatcccacatctattcaacttccgctcgttcctttggtaaaggcaaaactgatcaag 523 Query: 85 ctgagcaatataataattgatgcaaaatccggggtaactggagcaggacgtggagctaag 144 || | ||| || || |||||||||||||| || || | ||| ||||||||||| |||||| Sbjct: 524 ctaaccaacattattattgatgcaaaatctggagtcagtggtgcaggacgtggggctaag 583 Query: 145 gaagcaaatctttacaccgagnatagctgaaggcattcatgcttatggaataaaaggcca 204 ||||||||||||||||| || || ||||| || || ||||||||||| |||| | |||| Sbjct: 584 gaagcaaatctttacactga-aatcgctgagggtatccatgcttatgggataacaagcca 642 Query: 205 ccggcatgttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactat 264 |||||||| || ||| |||| |||||| | |||| |||||| | || ||||||||||| Sbjct: 643 tcggcatgtgcctgagattgagcaaggacttacagatgctgctgaatcaaaagttactat 702 Query: 265 cagcttcactccaaatcttatctgcatgaaacgtggcatgcaatctactatgtttgttga 324 |||||| |||||| || | || || ||||||||||| |||||||||||| ||| |||||| Sbjct: 703 cagctttactccacatttgatgtgtatgaaacgtgggatgcaatctactgtgtatgttga 762 Query: 325 aatggcacctggagtgactgtcagtgatttgtatcagcatctgaagtctacttatgaggg 384 | ||||| ||||||||||| ||| ||||||||| | || || ||||||||||| ||| Sbjct: 763 attggcatctggagtgactcccagggatttgtatgaacacctaaagtctacttacgagaa 822 Query: 385 tgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttgttgg 444 ||||||| |||| ||| ||||| ||| |||||||||||| |||| ||||||||| || Sbjct: 823 tgaagaaattgtcaagctgttacatggtagcaatgttccttgcacaagccatgttggggg 882 Query: 445 atcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatcatcat 504 ||| |||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 883 atcaaattactgcttcatgaatgtctatgaggatagaatacctggaagggccatcatcat 942 Query: 505 ctctgtcatagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatct 564 |||||||||||| |||||||||||||| |||||||| ||||| |||| || || ||| | Sbjct: 943 ctctgtcatagataatcttgtgaagggagcatctggtcaggctttgcaaaatcttaattt 1002 Query: 565 gatgatgggactgcctgagaacatgggactgcaatatcagcccct 609 |||||||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 1003 gatgatgggactgcctaagaatatggggctgcaataccagcccct 1047
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 155 bits (78), Expect = 2e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 82901 agggtgaagaatttgtgaaactgttaaatggtagcagcgttcctcacacacgccatgttg 82842 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| ||||||||||||||||||||||| |||||||||||||| ||| | ||||||| Sbjct: 82841 tgggatcaaattactgcttcatgaatgtctttgaggacagaattcctggacgtgccatca 82782 Query: 501 tcatctctgt 510 |||| ||||| Sbjct: 82781 tcatatctgt 82772 Score = 135 bits (68), Expect = 2e-28 Identities = 81/84 (96%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 83632 aggacgtggagctaaggaagccaatctctacaccgag-atagctgaaggcattcatgctt 83574 Query: 189 atggaataaaaggccaccggcatg 212 |||||||||||||||||||||||| Sbjct: 83573 atggaataaaaggccaccggcatg 83550 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 83163 gaaacgtgggatgcaatctactatgttcgttgaaatggcacctggagtgactgccaatga 83104 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 ||||||||||||||| |||||||| ||||||| Sbjct: 83103 tttgtatcagcatctcaagtctacatatgagg 83072 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| ||||| || ||||| || |||||||| |||||||||||| Sbjct: 82674 atagataatcttgtgaagggagcatcaggtcaggctgttcagaaccttaatctgatgatg 82615 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||| ||||||| || ||||||||||| |||||||| Sbjct: 82614 ggtctgccagagaacactgggctgcaatatcaacccctatt 82574 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 212 gttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttc 271 ||||| ||| ||||||||||| | |||||||||||| |||| ||||| ||||||||||| Sbjct: 83360 gttcctgagattgaacaaggactttcagaggctgctgagtctaaagtcactatcagcttt 83301 Query: 272 actccaaatct 282 ||||||||||| Sbjct: 83300 actccaaatct 83290 Score = 75.8 bits (38), Expect = 2e-10 Identities = 63/70 (90%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 1 cacggcttgttgccaacccgggnatgttatcccacgtctattcagctccctcttgttcct 60 ||||||||||||| || ||||| |||||||||||| |||||||| || |||||||||||| Sbjct: 84135 cacggcttgttgcaaatccggg-atgttatcccacatctattcaacttcctcttgttcct 84077 Query: 61 ctcataaagg 70 || ||||||| Sbjct: 84076 ctaataaagg 84067 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 |||||||||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 83831 aggcaaaactgatcaaagtgagcaacattatcattgatgcaaaatctggggt 83780
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 2e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 23246420 agggtgaagaatttgtgaaactgttaaatggtagcagcgttcctcacacacgccatgttg 23246361 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| ||||||||||||||||||||||| |||||||||||||| ||| | ||||||| Sbjct: 23246360 tgggatcaaattactgcttcatgaatgtctttgaggacagaattcctggacgtgccatca 23246301 Query: 501 tcatctctgt 510 |||| ||||| Sbjct: 23246300 tcatatctgt 23246291 Score = 135 bits (68), Expect = 2e-28 Identities = 81/84 (96%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 23247151 aggacgtggagctaaggaagccaatctctacaccgag-atagctgaaggcattcatgctt 23247093 Query: 189 atggaataaaaggccaccggcatg 212 |||||||||||||||||||||||| Sbjct: 23247092 atggaataaaaggccaccggcatg 23247069 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 23246682 gaaacgtgggatgcaatctactatgttcgttgaaatggcacctggagtgactgccaatga 23246623 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 ||||||||||||||| |||||||| ||||||| Sbjct: 23246622 tttgtatcagcatctcaagtctacatatgagg 23246591 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| ||||| || ||||| || |||||||| |||||||||||| Sbjct: 23246193 atagataatcttgtgaagggagcatcaggtcaggctgttcagaaccttaatctgatgatg 23246134 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||| ||||||| || ||||||||||| |||||||| Sbjct: 23246133 ggtctgccagagaacactgggctgcaatatcaacccctatt 23246093 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 212 gttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttc 271 ||||| ||| ||||||||||| | |||||||||||| |||| ||||| ||||||||||| Sbjct: 23246879 gttcctgagattgaacaaggactttcagaggctgctgagtctaaagtcactatcagcttt 23246820 Query: 272 actccaaatct 282 ||||||||||| Sbjct: 23246819 actccaaatct 23246809 Score = 75.8 bits (38), Expect = 2e-10 Identities = 63/70 (90%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 1 cacggcttgttgccaacccgggnatgttatcccacgtctattcagctccctcttgttcct 60 ||||||||||||| || ||||| |||||||||||| |||||||| || |||||||||||| Sbjct: 23247654 cacggcttgttgcaaatccggg-atgttatcccacatctattcaacttcctcttgttcct 23247596 Query: 61 ctcataaagg 70 || ||||||| Sbjct: 23247595 ctaataaagg 23247586 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 |||||||||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 23247350 aggcaaaactgatcaaagtgagcaacattatcattgatgcaaaatctggggt 23247299
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 2e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 23239448 agggtgaagaatttgtgaaactgttaaatggtagcagcgttcctcacacacgccatgttg 23239389 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| ||||||||||||||||||||||| |||||||||||||| ||| | ||||||| Sbjct: 23239388 tgggatcaaattactgcttcatgaatgtctttgaggacagaattcctggacgtgccatca 23239329 Query: 501 tcatctctgt 510 |||| ||||| Sbjct: 23239328 tcatatctgt 23239319 Score = 135 bits (68), Expect = 2e-28 Identities = 81/84 (96%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| Sbjct: 23240179 aggacgtggagctaaggaagccaatctctacaccgag-atagctgaaggcattcatgctt 23240121 Query: 189 atggaataaaaggccaccggcatg 212 |||||||||||||||||||||||| Sbjct: 23240120 atggaataaaaggccaccggcatg 23240097 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| Sbjct: 23239710 gaaacgtgggatgcaatctactatgttcgttgaaatggcacctggagtgactgccaatga 23239651 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 ||||||||||||||| |||||||| ||||||| Sbjct: 23239650 tttgtatcagcatctcaagtctacatatgagg 23239619 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| ||||| || ||||| || |||||||| |||||||||||| Sbjct: 23239221 atagataatcttgtgaagggagcatcaggtcaggctgttcagaaccttaatctgatgatg 23239162 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||| ||||||| || ||||||||||| |||||||| Sbjct: 23239161 ggtctgccagagaacactgggctgcaatatcaacccctatt 23239121 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 212 gttcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttc 271 ||||| ||| ||||||||||| | |||||||||||| |||| ||||| ||||||||||| Sbjct: 23239907 gttcctgagattgaacaaggactttcagaggctgctgagtctaaagtcactatcagcttt 23239848 Query: 272 actccaaatct 282 ||||||||||| Sbjct: 23239847 actccaaatct 23239837 Score = 75.8 bits (38), Expect = 2e-10 Identities = 63/70 (90%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 1 cacggcttgttgccaacccgggnatgttatcccacgtctattcagctccctcttgttcct 60 ||||||||||||| || ||||| |||||||||||| |||||||| || |||||||||||| Sbjct: 23240682 cacggcttgttgcaaatccggg-atgttatcccacatctattcaacttcctcttgttcct 23240624 Query: 61 ctcataaagg 70 || ||||||| Sbjct: 23240623 ctaataaagg 23240614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 |||||||||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 23240378 aggcaaaactgatcaaagtgagcaacattatcattgatgcaaaatctggggt 23240327
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete sequence Length = 139614 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 |||| ||||| ||||| ||| | ||| ||| ||||| |||||||||||| |||||||| | Sbjct: 89553 agggcgaagagtttgtcaagcttttacatggcagcactgttcctcacacgcgccatgtcg 89494 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 89493 tgggatcaaattactgcttcatgaatgtcttcgaggacaggattcctggaagggccatca 89434 Query: 501 tcatctctgt 510 |||||||||| Sbjct: 89433 tcatctctgt 89424 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 89806 gaaacgtggaatgcaatctaccatgtttgttgaaatggcacctggagtgactgccggtga 89747 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 |||||| |||||||| |||||||||||||||| Sbjct: 89746 tttgtaccagcatctcaagtctacttatgagg 89715 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 89326 atagataatcttgtgaagggagcgtctggtcaggctgtccagaacctcaatctgatgatg 89267 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||||||||||| || |||||||||||||||||||| Sbjct: 89266 ggcctgcctgagaacagagggctgcaatatcagcccctatt 89226 Score = 103 bits (52), Expect = 7e-19 Identities = 77/84 (91%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 |||||||||||| ||||| || ||||||||||| ||| |||||||||||||| ||||||| Sbjct: 90304 aggacgtggagcgaaggaggcgaatctttacactgag-atagctgaaggcatccatgctt 90246 Query: 189 atggaataaaaggccaccggcatg 212 ||||||||||||||||||| |||| Sbjct: 90245 atggaataaaaggccaccgtcatg 90222 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 ||||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 90477 aggcaaaactgatcaagctgagcaacattatcattgatgcaaaatctggggt 90426 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 24 atgttatcccacgtctattcagctccctcttgttcctctcataaagg 70 |||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 90773 atgttatcccacatctattcagcttcctcttgttcctctgataaagg 90727 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 214 tcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttcac 273 ||||||| ||||||||||| | |||||||||||| | || ||||| |||||||| || || Sbjct: 90009 tcccgagattgaacaaggactttcagaggctgctaaatctaaagtcactatcagttttac 89950 Query: 274 tccaaatcttatctg 288 ||||||||| ||||| Sbjct: 89949 tccaaatctgatctg 89935
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 |||| ||||| ||||| ||| | ||| ||| ||||| |||||||||||| |||||||| | Sbjct: 18261617 agggcgaagagtttgtcaagcttttacatggcagcactgttcctcacacgcgccatgtcg 18261676 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 18261677 tgggatcaaattactgcttcatgaatgtcttcgaggacaggattcctggaagggccatca 18261736 Query: 501 tcatctctgt 510 |||||||||| Sbjct: 18261737 tcatctctgt 18261746 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 18261364 gaaacgtggaatgcaatctaccatgtttgttgaaatggcacctggagtgactgccggtga 18261423 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 |||||| |||||||| |||||||||||||||| Sbjct: 18261424 tttgtaccagcatctcaagtctacttatgagg 18261455 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 18261844 atagataatcttgtgaagggagcgtctggtcaggctgtccagaacctcaatctgatgatg 18261903 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||||||||||| || |||||||||||||||||||| Sbjct: 18261904 ggcctgcctgagaacagagggctgcaatatcagcccctatt 18261944 Score = 103 bits (52), Expect = 7e-19 Identities = 77/84 (91%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 |||||||||||| ||||| || ||||||||||| ||| |||||||||||||| ||||||| Sbjct: 18260866 aggacgtggagcgaaggaggcgaatctttacactgag-atagctgaaggcatccatgctt 18260924 Query: 189 atggaataaaaggccaccggcatg 212 ||||||||||||||||||| |||| Sbjct: 18260925 atggaataaaaggccaccgtcatg 18260948 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 ||||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 18260693 aggcaaaactgatcaagctgagcaacattatcattgatgcaaaatctggggt 18260744 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 214 tcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttcac 273 ||||||| ||||||||||| | |||||||||||| | || ||||| |||||||| || || Sbjct: 18261161 tcccgagattgaacaaggactttcagaggctgctaaatctaaagtcactatcagttttac 18261220 Query: 274 tccaaatcttatctg 288 ||||||||| ||||| Sbjct: 18261221 tccaaatctgatctg 18261235 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 24 atgttatcccacgtctattcagctccctcttgttcctctcataaagg 70 |||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 18260397 atgttatcccacatctattcagcttcctcttgttcctctgataaagg 18260443
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 381 agggtgaagaatttgtgaagttgttaaatgacagcaatgttcctcacacacgccatgttg 440 |||| ||||| ||||| ||| | ||| ||| ||||| |||||||||||| |||||||| | Sbjct: 18270870 agggcgaagagtttgtcaagcttttacatggcagcactgttcctcacacgcgccatgtcg 18270929 Query: 441 ttggatcgaattactgcttcatgaatgtcttcgaggacagaattcccggaagggccatca 500 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 18270930 tgggatcaaattactgcttcatgaatgtcttcgaggacaggattcctggaagggccatca 18270989 Query: 501 tcatctctgt 510 |||||||||| Sbjct: 18270990 tcatctctgt 18270999 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 292 gaaacgtggcatgcaatctactatgtttgttgaaatggcacctggagtgactgtcagtga 351 ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 18270617 gaaacgtggaatgcaatctaccatgtttgttgaaatggcacctggagtgactgccggtga 18270676 Query: 352 tttgtatcagcatctgaagtctacttatgagg 383 |||||| |||||||| |||||||||||||||| Sbjct: 18270677 tttgtaccagcatctcaagtctacttatgagg 18270708 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 512 atagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaatctgatgatg 571 ||||| |||||||||||||| || ||||| ||||| || ||||||||||||||||||||| Sbjct: 18271097 atagataatcttgtgaagggagcgtctggtcaggctgtccagaacctcaatctgatgatg 18271156 Query: 572 ggactgcctgagaacatgggactgcaatatcagcccctatt 612 || ||||||||||||| || |||||||||||||||||||| Sbjct: 18271157 ggcctgcctgagaacagagggctgcaatatcagcccctatt 18271197 Score = 103 bits (52), Expect = 7e-19 Identities = 77/84 (91%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcatgctt 188 |||||||||||| ||||| || ||||||||||| ||| |||||||||||||| ||||||| Sbjct: 18270119 aggacgtggagcgaaggaggcgaatctttacactgag-atagctgaaggcatccatgctt 18270177 Query: 189 atggaataaaaggccaccggcatg 212 ||||||||||||||||||| |||| Sbjct: 18270178 atggaataaaaggccaccgtcatg 18270201 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 68 aggcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 ||||||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 18269946 aggcaaaactgatcaagctgagcaacattatcattgatgcaaaatctggggt 18269997 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 214 tcccgaggttgaacaaggattgtcagaggctgctcagtccaaagttactatcagcttcac 273 ||||||| ||||||||||| | |||||||||||| | || ||||| |||||||| || || Sbjct: 18270414 tcccgagattgaacaaggactttcagaggctgctaaatctaaagtcactatcagttttac 18270473 Query: 274 tccaaatcttatctg 288 ||||||||| ||||| Sbjct: 18270474 tccaaatctgatctg 18270488 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 24 atgttatcccacgtctattcagctccctcttgttcctctcataaagg 70 |||||||||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 18269650 atgttatcccacatctattcagcttcctcttgttcctctgataaagg 18269696
>gb|AY021439.1| Oryza sativa microsatellite MRG3764 containing (TA)X26, genomic sequence Length = 252 Score = 79.8 bits (40), Expect = 1e-11 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 129 aggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcattcat 184 ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||| Sbjct: 198 aggacgtggagctaaggaagccaatctctacaccgag-atagctgaaggcattcat 252 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 70 gcaaaactgatcaagctgagcaatataataattgatgcaaaatccggggt 119 |||||||||||||| ||||||| || || |||||||||||||| ||||| Sbjct: 1 gcaaaactgatcaaagtgagcaacattatcattgatgcaaaatctggggt 50
>ref|NM_179662.2| Arabidopsis thaliana N-acetyl-gamma-glutamyl-phosphate reductase/ NAD binding / oxidoreductase, acting on the aldehyde or oxo group of donors, NAD o> AT2G19940 transcript variant AT2G19940.2 mRNA, complete cds Length = 1608 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 823 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 882 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 883 gag-atagctgaaggcatt 900
>ref|NM_127552.2| Arabidopsis thaliana N-acetyl-gamma-glutamyl-phosphate reductase/ NAD binding / oxidoreductase, acting on the aldehyde or oxo group of donors, NAD o> AT2G19940 transcript variant AT2G19940.1 mRNA, complete cds Length = 1594 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 809 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 868 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 869 gag-atagctgaaggcatt 886
>gb|BT014719.1| Arabidopsis thaliana At2g19940.1 mRNA sequence Length = 1052 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 537 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 596 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 597 gag-atagctgaaggcatt 614
>gb|AY090309.1| Arabidopsis thaliana At2g19940/F6F22.3 mRNA, complete cds Length = 1206 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 691 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 750 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 751 gag-atagctgaaggcatt 768
>gb|AY058082.1| Arabidopsis thaliana At2g19940/F6F22.3 mRNA, complete cds Length = 1561 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 810 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 869 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 870 gag-atagctgaaggcatt 887
>emb|BX820669.1|CNS0A8L5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1559 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 798 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 857 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 858 gag-atagctgaaggcatt 875
>emb|BX820214.1|CNS0A8EM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 77.8 bits (39), Expect = 4e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 103 gatgcaaaatccggggtaactggagcaggacgtggagctaaggaagcaaatctttacacc 162 ||||||||||| || || | ||||||||||||||| |||||||| |||||||||||| | Sbjct: 749 gatgcaaaatctggtgttagtggagcaggacgtggtgctaaggaggcaaatctttactct 808 Query: 163 gagnatagctgaaggcatt 181 ||| ||||||||||||||| Sbjct: 809 gag-atagctgaaggcatt 826
>emb|BX819415.1|CNS0A8VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1518 Score = 69.9 bits (35), Expect = 9e-09 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 123 tggagcaggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcatt 181 ||||||||||||||| |||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 819 tggagcaggacgtggtgctaaggaggcaaatctttactctgag-atagctgaaggcatt 876
>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete sequence Length = 126386 Score = 60.0 bits (30), Expect = 9e-06 Identities = 49/54 (90%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 128 caggacgtggagctaaggaagcaaatctttacaccgagnatagctgaaggcatt 181 |||||||||| |||||||| |||||||||||| | ||| ||||||||||||||| Sbjct: 8549 caggacgtggtgctaaggaggcaaatctttactctgag-atagctgaaggcatt 8497
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 540 gccaggccgtgcagaacctcaatctgatgatgggactgcctgaga 584 |||||||||| ||||||||||||| ||| |||||||||| |||| Sbjct: 2749067 gccaggccgtccagaacctcaatcgcatgctgggactgccggaga 2749111
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Minus Query: 509 gtcatagacaatcttgtgaagggggcatctggccaggccgtgcagaacctcaat 562 ||||| ||||| || || ||||| || || |||||||| ||||||||||||||| Sbjct: 6393131 gtcatcgacaacctggtcaagggcgcttcgggccaggcggtgcagaacctcaat 6393078
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Plus Query: 511 catagacaatcttgtgaagggggcatctggccaggccgtgcagaac 556 ||||||||| ||||||||||| ||||| || |||||| | |||||| Sbjct: 769590 catagacaaccttgtgaagggcgcatccggtcaggccatccagaac 769635
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 539 ggccaggccgtgcagaacctcaatctgatg 568 |||||||| ||||||||||| ||||||||| Sbjct: 3994439 ggccaggcggtgcagaacctgaatctgatg 3994410
>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete sequence Length = 201328 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 aaaggcaaaactgatcaagctg 87 |||||||||||||||||||||| Sbjct: 125259 aaaggcaaaactgatcaagctg 125280
>gb|AC147383.4| Pan troglodytes BAC clone RP43-157C2 from 7, complete sequence Length = 190266 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gccatcatcatctctgtcat 513 |||||||||||||||||||| Sbjct: 125884 gccatcatcatctctgtcat 125865
>gb|AC002540.1| Homo sapiens BAC clone GS1-25M2 from 7, complete sequence Length = 70851 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 gccatcatcatctctgtcat 513 |||||||||||||||||||| Sbjct: 46911 gccatcatcatctctgtcat 46892
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 actggagcaggacgtggagc 140 |||||||||||||||||||| Sbjct: 3034358 actggagcaggacgtggagc 3034377
>emb|AL137005.6| Human DNA sequence from clone RP1-230L10 on chromosome 6 Contains part of a novel gene, complete sequence Length = 103679 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 327 tggcacctggagtgactgtcagtgattt 354 ||||| |||||||||||| ||||||||| Sbjct: 11684 tggcagctggagtgactgacagtgattt 11711
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 caggccgtgcagaacctcaa 561 |||||||||||||||||||| Sbjct: 162051 caggccgtgcagaacctcaa 162032
>emb|AJ009897.1|TNAJ9897 Thermotoga neapolitana argC, argJ genes and partial argH, argB genes Length = 3250 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 511 catagacaatcttgtgaagggggcatctggccaggc 546 ||||||||| || |||||||||||||| || ||||| Sbjct: 1765 catagacaacctcgtgaagggggcatcgggtcaggc 1800
>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence Length = 197191 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 cgtgcagaacctcaatctga 566 |||||||||||||||||||| Sbjct: 102652 cgtgcagaacctcaatctga 102671
>gb|AC025449.6| Homo sapiens chromosome 5 clone CTD-2124B8, complete sequence Length = 199036 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 tcatgcttatggaataaaaggcca 204 ||||||||||||| |||||||||| Sbjct: 88237 tcatgcttatggattaaaaggcca 88260
>gb|AC006986.3|AC006986 Homo sapiens BAC clone RP11-155J5 from Y, complete sequence Length = 173957 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 ctgatgatgggactgcctga 582 |||||||||||||||||||| Sbjct: 146938 ctgatgatgggactgcctga 146957
>gb|AC087653.6| Homo sapiens chromosome 11, clone RP1-259N9, complete sequence Length = 138141 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 ggccatcatcatctctgtcataga 516 ||||||||||| |||||||||||| Sbjct: 120032 ggccatcatcacctctgtcataga 120009
>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence Length = 168863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 tttgttgaaatggcacctgg 336 |||||||||||||||||||| Sbjct: 117131 tttgttgaaatggcacctgg 117112
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 542 caggccgtgcagaacctcaatctgatgatggg 573 ||||| |||||||||||||| |||||| |||| Sbjct: 1141683 caggcggtgcagaacctcaacctgatgctggg 1141652
>gb|AF115103.1|AF115103 Streptococcus thermophilus bacteriophage Sfi21, complete genome Length = 40739 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 gaatttgtgaagttgttaaa 408 |||||||||||||||||||| Sbjct: 38097 gaatttgtgaagttgttaaa 38116 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,245,709 Number of Sequences: 3902068 Number of extensions: 5245709 Number of successful extensions: 97103 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96777 Number of HSP's gapped (non-prelim): 300 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
