ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9m23 |
|---|---|
| Clone Library Name | barley_pub |
>IF2_CHLCV (Q823F2) Translation initiation factor IF-2| Length = 887 Score = 37.4 bits (85), Expect = 0.014 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++E C QVGD +QC E + K Sbjct: 855 KGFECGILLEGCQHAQVGDILQCYEVIYHPQK 886
>IF2_CHLMU (Q9PKU0) Translation initiation factor IF-2| Length = 896 Score = 35.8 bits (81), Expect = 0.040 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++++ + Q+GDT+QC E + K Sbjct: 864 KGMECGILLDNYQQAQIGDTLQCYEVIYHPQK 895
>IF2_CHLPN (Q9Z8M1) Translation initiation factor IF-2| Length = 890 Score = 33.9 bits (76), Expect = 0.15 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++E + Q+GD +QC E + K Sbjct: 858 KGLECGILLEGYQQAQIGDVLQCYEVIYHPQK 889
>IF2_CHLTR (O84098) Translation initiation factor IF-2| Length = 892 Score = 33.9 bits (76), Expect = 0.15 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++++ + QVGD +QC E + K Sbjct: 860 KGMECGILLDNYQQAQVGDILQCYEVIYHPQK 891
>IF2_CHLTA (Q3KMS4) Translation initiation factor IF-2| Length = 892 Score = 33.9 bits (76), Expect = 0.15 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++++ + QVGD +QC E + K Sbjct: 860 KGMECGILLDNYQQAQVGDILQCYEVIYHPQK 891
>IF2_CAMJR (Q5HX30) Translation initiation factor IF-2| Length = 871 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE CD+ +VGD I+ ++V Sbjct: 834 AKEVAKGYECGVGIEGCDDMRVGDYIESYKEV 865
>IF2_CAMJE (Q9PIZ1) Translation initiation factor IF-2| Length = 871 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE CD+ +VGD I+ ++V Sbjct: 834 AKEVAKGYECGVGIEGCDDMRVGDYIESYKEV 865
>IF2C_GUITH (O78489) Translation initiation factor IF-2, chloroplast| Length = 735 Score = 33.5 bits (75), Expect = 0.20 Identities = 12/31 (38%), Positives = 23/31 (74%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 + + +G++CGL IE+ E++VGD+I+ E + Sbjct: 703 EEVSEGNECGLFIEEFSEWKVGDSIEIFELI 733
>IF2_CHLAB (Q5L627) Translation initiation factor IF-2| Length = 874 Score = 33.1 bits (74), Expect = 0.26 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 KG +CG+++E QVGD +QC E + K Sbjct: 842 KGLECGILLEGYQNAQVGDILQCYEVIYHPQK 873
>IF2_MYCGE (P47388) Translation initiation factor IF-2| Length = 619 Score = 32.0 bits (71), Expect = 0.58 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRK 109 ++ G +CG+VI C++ ++GD I E+ I K Sbjct: 584 IETGKNCGIVINGCNDIKIGDIIVAYEKQIVK 615
>IF2_LACAC (Q5FJN6) Translation initiation factor IF-2| Length = 877 Score = 31.6 bits (70), Expect = 0.76 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 +G+DCGL I+D ++ +VGD + E +PK Sbjct: 846 QGNDCGLTIKDYNDIKVGDEFEVYEMQQVEPK 877
>IF2_TROWT (Q83GT8) Translation initiation factor IF-2| Length = 803 Score = 31.6 bits (70), Expect = 0.76 Identities = 11/31 (35%), Positives = 22/31 (70%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 G +CG+ + CD+ ++GD I+ + Q++ KP+ Sbjct: 773 GFECGVGLGSCDDIRIGDEIETI-QIVEKPR 802
>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2| Length = 803 Score = 31.6 bits (70), Expect = 0.76 Identities = 11/31 (35%), Positives = 22/31 (70%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 G +CG+ + CD+ ++GD I+ + Q++ KP+ Sbjct: 773 GFECGVGLGSCDDIRIGDEIETI-QIVEKPR 802
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 31.2 bits (69), Expect = 0.99 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 +G +CGL + + + VGD +QC E ++ KP+ Sbjct: 933 EGYECGLTLTNYSDIHVGDEVQCYE-MVEKPR 963
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 31.2 bits (69), Expect = 0.99 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKP 112 G +CG+ ++D ++ +VGD I+C E KP Sbjct: 774 GYECGVKLKDYNDVKVGDQIECYEIRYEKP 803
>IF2M_SCHPO (O59683) Translation initiation factor IF-2, mitochondrial| precursor (IF-2Mt) (IF-2(Mt)) Length = 686 Score = 31.2 bits (69), Expect = 0.99 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +2 Query: 11 TLDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPKF 118 ++ KG +CG+++++ DE GD +Q + + P F Sbjct: 651 SIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPDF 686
>IF2_NITOC (Q3J9B6) Translation initiation factor IF-2| Length = 845 Score = 30.8 bits (68), Expect = 1.3 Identities = 11/30 (36%), Positives = 22/30 (73%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKP 112 G++CG+ ++D + +VGD I+ E+V ++P Sbjct: 814 GTECGIGVKDYKDVKVGDQIEVYERVRKEP 843
>IF2_CHLCH (Q3AQK7) Translation initiation factor IF-2| Length = 1022 Score = 30.8 bits (68), Expect = 1.3 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 +D G +CGL +++ D+ +VGD ++ V +K K Sbjct: 988 VDSGYECGLSLKNYDDIKVGDVVEAYRIVEKKRK 1021
>IF2M_HUMAN (P46199) Translation initiation factor IF-2, mitochondrial| precursor (IF-2Mt) (IF-2(Mt)) Length = 727 Score = 30.8 bits (68), Expect = 1.3 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +2 Query: 23 GSDCGLVI-EDCDEYQVGDTIQCLEQ 97 G DCGL + ED E+QVGD I C E+ Sbjct: 689 GMDCGLSLDEDNMEFQVGDRIVCYEE 714
>IF2_RHIME (Q92SW4) Translation initiation factor IF-2| Length = 889 Score = 30.4 bits (67), Expect = 1.7 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQC--LEQVIR 106 + G +CG+ E+ ++ + GDTI+C +E V R Sbjct: 855 VQSGQECGMAFENYEDIRAGDTIECFRVEHVTR 887
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 30.0 bits (66), Expect = 2.2 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 + KG +CG+ +E+ ++ +VGD I+ E V Sbjct: 1045 VQKGYECGMGLENFNDIKVGDVIEAFEMV 1073
>IF2_WOLSU (Q7M7X5) Translation initiation factor IF-2| Length = 939 Score = 30.0 bits (66), Expect = 2.2 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 A + KG +CG+++E ++ QVGD + ++V + K Sbjct: 902 AREVSKGYECGIMLEGFNDVQVGDVFETYKEVEKARK 938
>IF2_XANC8 (Q4UWA2) Translation initiation factor IF-2| Length = 902 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + G++CG+ ++ ++ + GD I+C E++ Sbjct: 866 DEVRNGTECGIGVKAYNDVKAGDQIECFERI 896
>IF2_XANC5 (Q3BRP5) Translation initiation factor IF-2| Length = 904 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + G++CG+ ++ ++ + GD I+C E++ Sbjct: 868 DEVRNGTECGIGVKAYNDVKAGDQIECFERI 898
>IF2_XANAC (Q8PJ55) Translation initiation factor IF-2| Length = 904 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + G++CG+ ++ ++ + GD I+C E++ Sbjct: 868 DEVRNGTECGIGVKAYNDVKAGDQIECFERI 898
>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2| Length = 906 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + G++CG+ ++ ++ + GD I+C E++ Sbjct: 870 DEVRNGNECGIGVKAYNDVKAGDQIECFERI 900
>IF2_XANCP (Q8P7U7) Translation initiation factor IF-2| Length = 916 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + G++CG+ ++ ++ + GD I+C E++ Sbjct: 880 DEVRNGTECGIGVKAYNDVKAGDQIECFERI 910
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 29.6 bits (65), Expect = 2.9 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +2 Query: 20 KGSDCGLVIEDCDEYQVGDTIQCLEQV 100 KG +CG+ +E+ ++ ++GD I+ E+V Sbjct: 951 KGFECGMGLENYNDIKIGDIIEAFEEV 977
>IF2_STAAW (Q8NWZ1) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAS (Q6G9U4) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAR (Q6GHG6) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAN (P65134) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAM (P65133) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAC (Q5HGG2) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_STAAB (Q2YXP7) Translation initiation factor IF-2| Length = 705 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 A + KG +CG+ IE+ ++ + GD I+ E V Sbjct: 670 AKEVAKGYECGITIENYNDLKEGDVIEAFEMV 701
>IF2_HELPY (P55972) Translation initiation factor IF-2| Length = 944 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/32 (28%), Positives = 23/32 (71%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRK 109 + KG +CG+++++ +E +VGD + +++ +K Sbjct: 910 VSKGYECGIMLDNYNEIKVGDVFETYKEIHKK 941
>IF2_HELPJ (Q9ZM46) Translation initiation factor IF-2| Length = 949 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/32 (28%), Positives = 23/32 (71%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRK 109 + KG +CG+++++ +E +VGD + +++ +K Sbjct: 915 VSKGYECGIMLDNYNEIKVGDVFETYKEIHKK 946
>IF2C_PHAVU (P57997) Translation initiation factor IF-2, chloroplast precursor| (PvIF2cp) Length = 1012 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRK 109 ++ G +CGL +ED D+++ GD I+ Q+ R+ Sbjct: 965 VNAGLECGLGLEDFDDWEEGDIIEPSTQLRRR 996
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 29.6 bits (65), Expect = 2.9 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQC 88 G +CG+ E+ ++ + GDTI+C Sbjct: 882 GQECGMAFENYEDIRAGDTIEC 903
>IF2_CHLTE (Q8KFT1) Translation initiation factor IF-2| Length = 914 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 +D G +CG+ ++ D+ +VGD I+ + V +K K Sbjct: 880 VDAGYECGVSLKGYDDIKVGDVIEAYKIVEKKRK 913
>IF2_MYCPN (P75590) Translation initiation factor IF-2| Length = 617 Score = 29.3 bits (64), Expect = 3.7 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 ++ G +CG+VI C++ QV D I E+ K K Sbjct: 583 MEAGKNCGIVINGCEDIQVCDIILVYEKQEVKSK 616
>IF2_TREDE (Q73NP6) Translation initiation factor IF-2| Length = 896 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLE--QVIRK 109 G +CG+ IED ++ QV D ++ +E QV RK Sbjct: 845 GFECGIGIEDFNDIQVDDQLEIIEMIQVARK 875
>IF2_PELLD (Q3B1Z8) Translation initiation factor IF-2| Length = 915 Score = 28.9 bits (63), Expect = 4.9 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 +D G +CG+ +++ D+ +VGD ++ V +K K Sbjct: 881 VDAGYECGVGLKNYDDIKVGDVVEAYRIVEKKRK 914
>IF2_HELHP (Q7VHF6) Translation initiation factor IF-2| Length = 882 Score = 28.9 bits (63), Expect = 4.9 Identities = 9/34 (26%), Positives = 23/34 (67%) Frame = +2 Query: 5 ADTLDKGSDCGLVIEDCDEYQVGDTIQCLEQVIR 106 A + KG +CG+++E+ ++ +VGD + +++ + Sbjct: 845 AKEVSKGYECGIMLENHNDIKVGDVFETYKEITK 878
>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2| Length = 880 Score = 28.5 bits (62), Expect = 6.4 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 G +CG+ ++ ++++VGDTI+ + K K Sbjct: 848 GFECGIQVDGYNDFKVGDTIEAYNVTVIKRK 878
>IF2C_PORPU (P51257) Translation initiation factor IF-2, chloroplast| Length = 763 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQVIRK 109 + + G++CG+ I + +Q GD IQ + V +K Sbjct: 727 EEIQAGNECGIFISEFQLWQTGDKIQSFDLVPKK 760
>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2| Length = 891 Score = 28.5 bits (62), Expect = 6.4 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQCLEQVIRKPK 115 G +CG+ ++ ++++VGDTI+ + K K Sbjct: 859 GFECGIQVDGYNDFKVGDTIEAYNVTVIKRK 889
>IF2_XYLFT (Q87EV4) Translation initiation factor IF-2| Length = 892 Score = 28.5 bits (62), Expect = 6.4 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + +CG+ ++ ++ +VGD+I+C E++ Sbjct: 856 DEVRNSIECGIGVKAYNDVRVGDSIECFERI 886
>IF2_XYLFA (Q9PGR3) Translation initiation factor IF-2| Length = 892 Score = 28.5 bits (62), Expect = 6.4 Identities = 9/31 (29%), Positives = 21/31 (67%) Frame = +2 Query: 8 DTLDKGSDCGLVIEDCDEYQVGDTIQCLEQV 100 D + ++CG+ ++ ++ +VGD I+C E++ Sbjct: 856 DEVRNSTECGIGVKAYNDVRVGDHIECFERI 886
>RK3_GUITH (O46894) Chloroplast 50S ribosomal protein L3| Length = 204 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 303 IDVVRLDKD*DALALMNCVTFERGN 377 + VV LDKD + L L CV +RGN Sbjct: 175 LTVVHLDKDNNVLVLKGCVPGKRGN 199
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQC--LEQVIRK 109 G +CG++ + +VGDTI+C +E++ R+ Sbjct: 977 GQECGMMFAGFQDIKVGDTIECFTVEEIKRQ 1007
>RAB4A_BRARE (Q6PHI9) Ras-related protein Rab-4A| Length = 213 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -1 Query: 248 VSYIVKILVSSNKWLNSQQWDHAGDKRLSSISTLY 144 V + KI+ NK++ Q WD AG +R S++ Y Sbjct: 43 VEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSY 77
>IF2_NITWN (Q3SWP9) Translation initiation factor IF-2| Length = 871 Score = 28.1 bits (61), Expect = 8.3 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +2 Query: 14 LDKGSDCGLVIEDCDEYQVGDTIQC 88 + G +CG+ E + +VGD I+C Sbjct: 837 VQSGQECGMAFESYGDMRVGDVIEC 861
>IF2_RHILO (Q98BI8) Translation initiation factor IF-2| Length = 860 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%) Frame = +2 Query: 23 GSDCGLVIEDCDEYQVGDTIQC--LEQVIR 106 G +CG+ ++ ++ +VGD I+C +E V R Sbjct: 829 GQECGMAFQNYEDMRVGDIIECFRVEMVTR 858 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,581,142 Number of Sequences: 219361 Number of extensions: 1070341 Number of successful extensions: 2838 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2783 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2838 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
