ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9p19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477264.1| Oryza sativa (japonica cultivar-group), mRNA 174 2e-40
2dbj|AK068864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
6gb|AF509529.1| Gallus gallus pyruvate carboxylase (PYC) mRNA, co... 52 0.002
7ref|NM_204346.1| Gallus gallus pyruvate carboxylase (PCX), mRNA 52 0.002
8ref|XM_310671.2| Anopheles gambiae str. PEST ENSANGP00000020066 ... 46 0.13
9emb|AL354936.21| Human DNA sequence from clone RP11-374A22 on ch... 44 0.52
10emb|AJ328190.1|HSA328190 Homo sapiens genomic sequence surroundi... 44 0.52
11gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.0
12ref|NM_193857.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
13emb|AL353637.21| Human DNA sequence from clone RP11-159H20 on ch... 42 2.0
14emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 42 2.0
15emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.0
16emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 42 2.0
17emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 42 2.0
18ref|NM_136209.2| Drosophila melanogaster CG9318-RA (CG9318), mRNA 42 2.0
19gb|AY069665.1| Drosophila melanogaster LD44273 full length cDNA 42 2.0
20gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38... 42 2.0
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 42 2.0
24dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
25dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
26dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
27dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
28dbj|AK107175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
29emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in l... 42 2.0
30gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76... 42 2.0
31gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 42 2.0
32ref|XM_481072.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
33ref|XM_475769.1| Oryza sativa (japonica cultivar-group), predic... 40 8.1
34ref|NM_001030595.1| Gallus gallus Rho guanine nucleotide exchang... 40 8.1
35ref|XM_463823.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
36ref|XM_450120.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
37ref|XM_514362.1| PREDICTED: Pan troglodytes similar to calsynten... 40 8.1
38gb|AY753301.1| Homo sapiens alcadein alpha-1 mRNA, complete cds 40 8.1
39ref|XM_593913.2| PREDICTED: Bos taurus similar to Iroquois relat... 40 8.1
40gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 8.1
41ref|XM_416507.1| PREDICTED: Gallus gallus similar to Zinc finger... 40 8.1
42gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
43gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.1
44gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, co... 40 8.1
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
46emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.1
47gb|AF438482.1| Homo sapiens non-classical cadherin XB31alpha1 (X... 40 8.1
48emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on ch... 40 8.1
49emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on ch... 40 8.1
50emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 8.1
51gb|BC033902.2| Homo sapiens calsyntenin 1, transcript variant 2,... 40 8.1
52emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chr... 40 8.1
53emb|AJ719610.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.1
54gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, co... 40 8.1
55ref|NM_001037465.1| Bos taurus spleen tyrosine kinase (SYK), mRNA 40 8.1
56dbj|AK056820.1| Homo sapiens cDNA FLJ32258 fis, clone PROST10002... 40 8.1
57dbj|AK001591.1| Homo sapiens cDNA FLJ10729 fis, clone NT2RP30012... 40 8.1
58ref|NM_014944.3| Homo sapiens calsyntenin 1 (CLSTN1), transcript... 40 8.1
59ref|NM_001009566.1| Homo sapiens calsyntenin 1 (CLSTN1), transcr... 40 8.1
60gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.1
61gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 40 8.1
62gb|DP000004.1| Lemur catta target 1 genomic scaffold 40 8.1
63gb|S77386.1| ferritin middle subunit [Salmo salar=Atlantic salmo... 40 8.1
64gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence 40 8.1
65gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.1
66gb|BC108086.1| Bos taurus cDNA clone MGC:127145 IMAGE:7944116, c... 40 8.1
67dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
68dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
69gb|AF348319.1|AF348319 Zea mays TERMINAL EAR1 (te1) gene, comple... 40 8.1
70dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
71dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
72dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
73gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, comple... 40 8.1
74gb|AE009603.1| Brucella melitensis 16M chromosome I, section 160... 40 8.1
75gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, comple... 40 8.1
76dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
77dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.1
78gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 8.1
79emb|BX248985.6| Zebrafish DNA sequence from clone CH211-192N18 i... 40 8.1
80dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
81dbj|AB020718.1| Homo sapiens mRNA for KIAA0911 protein, partial cds 40 8.1
82dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
83dbj|AK000605.1| Homo sapiens cDNA FLJ20598 fis, clone KAT07882, ... 40 8.1
84dbj|AK073200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
85gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f1... 40 8.1
86dbj|AK115591.1| Ciona intestinalis cDNA, clone:cilv005o09, full ... 40 8.1
87gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.1
88gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 8.1
89gb|AF047852.1|AF047852 Zea mays terminal ear1 mRNA, complete cds 40 8.1
90emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 8.1 
>ref|XM_477264.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1394

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Plus

                                                                       
Query: 423 cagattgttttattgacagatggaatggacactcgtccatataggcttagctggccaagg 482
           ||||||||| | |||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 470 cagattgttctgttgacagatggaatggacactcgtccttacaggctaagctggccaagg 529

                                                                       
Query: 483 atgtctatcgtgtacgatgtatcacctggaagaatcttcagtacagcagcccagcaactc 542
            ||||| | ||||| |||||||||||| ||||| |||||| ||| ||| | |||||||||
Sbjct: 530 ttgtctgttgtgtatgatgtatcacctagaagagtcttcattactgcatcacagcaactc 589

                                               
Query: 543 agaggagcaggagcaaaaatatcgcggaactgtgtt 578
           |||||||| |||||||||||||| ||||||||||||
Sbjct: 590 agaggagccggagcaaaaatatcacggaactgtgtt 625



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 259 cgccgctcagatcccctttttattgatccatatgctgctgtgctactttcacttgatgtg 318
           |||||| ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 287 cgccgcccagatcctctttttattgacccatatgcagctgttctactttcacttgatgtg 346

             
Query: 319 gc 320
           ||
Sbjct: 347 gc 348



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 351 tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 410
           ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 379 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 438

                         
Query: 411 acatttgataagca 424
           |||||| |||||||
Sbjct: 439 acatttcataagca 452
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>dbj|AK068864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O10, full
           insert sequence
          Length = 1387

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/156 (89%)
 Strand = Plus / Plus

                                                                       
Query: 423 cagattgttttattgacagatggaatggacactcgtccatataggcttagctggccaagg 482
           ||||||||| | |||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 469 cagattgttctgttgacagatggaatggacactcgtccttacaggctaagctggccaagg 528

                                                                       
Query: 483 atgtctatcgtgtacgatgtatcacctggaagaatcttcagtacagcagcccagcaactc 542
            ||||| | ||||| |||||||||||| ||||| |||||| ||| ||| | |||||||||
Sbjct: 529 ttgtctgttgtgtatgatgtatcacctagaagagtcttcattactgcatcacagcaactc 588

                                               
Query: 543 agaggagcaggagcaaaaatatcgcggaactgtgtt 578
           |||||||| |||||||||||||| ||||||||||||
Sbjct: 589 agaggagccggagcaaaaatatcacggaactgtgtt 624



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 259 cgccgctcagatcccctttttattgatccatatgctgctgtgctactttcacttgatgtg 318
           |||||| ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 286 cgccgcccagatcctctttttattgacccatatgcagctgttctactttcacttgatgtg 345

             
Query: 319 gc 320
           ||
Sbjct: 346 gc 347



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 351 tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 410
           ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 378 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 437

                         
Query: 411 acatttgataagca 424
           |||||| |||||||
Sbjct: 438 acatttcataagca 451
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                           
Query: 424     agattgttttattgacagatggaatggacactcgtccatataggcttagctggccaagga 483
               |||||||| | |||||||||||||||||||||||||| || ||||| |||||||||||| 
Sbjct: 8227364 agattgttctgttgacagatggaatggacactcgtccttacaggctaagctggccaaggt 8227423

                                                                           
Query: 484     tgtctatcgtgtacgatgtatcacctggaagaatcttcagtacagcagcccagcaactca 543
               ||||| | ||||| |||||||||||| ||||| |||||| ||| ||| | ||||||||||
Sbjct: 8227424 tgtctgttgtgtatgatgtatcacctagaagagtcttcattactgcatcacagcaactca 8227483

                   
Query: 544     gagg 547
               ||||
Sbjct: 8227484 gagg 8227487



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                      
Query: 266     cagatcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 320
               ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 8227113 cagatcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 8227167



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 351     tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 410
               ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 8227198 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 8227257

                             
Query: 411     acatttgataagca 424
               |||||| |||||||
Sbjct: 8227258 acatttcataagca 8227271



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                 
Query: 545     aggagcaggagcaaaaatatcgcggaactgtgtt 578
               |||||| |||||||||||||| ||||||||||||
Sbjct: 8228631 aggagccggagcaaaaatatcacggaactgtgtt 8228664
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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0003K21
          Length = 158810

 Score =  127 bits (64), Expect = 4e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                          
Query: 424    agattgttttattgacagatggaatggacactcgtccatataggcttagctggccaagga 483
              |||||||| | |||||||||||||||||||||||||| || ||||| |||||||||||| 
Sbjct: 110387 agattgttctgttgacagatggaatggacactcgtccttacaggctaagctggccaaggt 110446

                                                                          
Query: 484    tgtctatcgtgtacgatgtatcacctggaagaatcttcagtacagcagcccagcaactca 543
              ||||| | ||||| |||||||||||| ||||| |||||| ||| ||| | ||||||||||
Sbjct: 110447 tgtctgttgtgtatgatgtatcacctagaagagtcttcattactgcatcacagcaactca 110506

                  
Query: 544    gagg 547
              ||||
Sbjct: 110507 gagg 110510



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 266    cagatcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 320
              ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 110136 cagatcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 110190



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 351    tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 410
              ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 110221 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 110280

                            
Query: 411    acatttgataagca 424
              |||||| |||||||
Sbjct: 110281 acatttcataagca 110294



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 545    aggagcaggagcaaaaatatcgcggaactgtgtt 578
              |||||| |||||||||||||| ||||||||||||
Sbjct: 111654 aggagccggagcaaaaatatcacggaactgtgtt 111687
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>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0639B07
          Length = 138780

 Score =  127 bits (64), Expect = 4e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                         
Query: 424   agattgttttattgacagatggaatggacactcgtccatataggcttagctggccaagga 483
             |||||||| | |||||||||||||||||||||||||| || ||||| |||||||||||| 
Sbjct: 22476 agattgttctgttgacagatggaatggacactcgtccttacaggctaagctggccaaggt 22535

                                                                         
Query: 484   tgtctatcgtgtacgatgtatcacctggaagaatcttcagtacagcagcccagcaactca 543
             ||||| | ||||| |||||||||||| ||||| |||||| ||| ||| | ||||||||||
Sbjct: 22536 tgtctgttgtgtatgatgtatcacctagaagagtcttcattactgcatcacagcaactca 22595

                 
Query: 544   gagg 547
             ||||
Sbjct: 22596 gagg 22599



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 266   cagatcccctttttattgatccatatgctgctgtgctactttcacttgatgtggc 320
             ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 22225 cagatcctctttttattgacccatatgcagctgttctactttcacttgatgtggc 22279



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 351   tttaatgccatctgcagatcattataggctaactactagatatcttgatgagaaactgca 410
             ||||||||||  |||||| ||||||||||||   || |||||| ||||||| ||| ||||
Sbjct: 22310 tttaatgccaagtgcagaacattataggctagtgaccagatatattgatgacaaattgca 22369

                           
Query: 411   acatttgataagca 424
             |||||| |||||||
Sbjct: 22370 acatttcataagca 22383



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 545   aggagcaggagcaaaaatatcgcggaactgtgtt 578
             |||||| |||||||||||||| ||||||||||||
Sbjct: 23743 aggagccggagcaaaaatatcacggaactgtgtt 23776
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>gb|AF509529.1| Gallus gallus pyruvate carboxylase (PYC) mRNA, complete cds;
           nuclear gene for mitochondrial product
          Length = 3559

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 146 tcgccaccggcgccgacgtccccggc 171
           ||||||||||||||||||||||||||
Sbjct: 526 tcgccaccggcgccgacgtccccggc 501
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>ref|NM_204346.1| Gallus gallus pyruvate carboxylase (PCX), mRNA
          Length = 3559

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 146 tcgccaccggcgccgacgtccccggc 171
           ||||||||||||||||||||||||||
Sbjct: 526 tcgccaccggcgccgacgtccccggc 501
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>ref|XM_310671.2| Anopheles gambiae str. PEST ENSANGP00000020066 (ENSANGG00000017577),
            partial mRNA
          Length = 2133

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 210  gctcctcctcgctgctctccgcg 232
            |||||||||||||||||||||||
Sbjct: 1819 gctcctcctcgctgctctccgcg 1797
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>emb|AL354936.21| Human DNA sequence from clone RP11-374A22 on chromosome 6 Contains a
             novel gene, the 5' end of the TCBA1 gene for T-cell
             lymphoma breakpoint associated target 1 and a CpG island,
             complete sequence
          Length = 161618

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 223   gctctccgcgccgctcgcctca 244
             ||||||||||||||||||||||
Sbjct: 99787 gctctccgcgccgctcgcctca 99766
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>emb|AJ328190.1|HSA328190 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-IF13C
          Length = 323

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 223 gctctccgcgccgctcgcctca 244
           ||||||||||||||||||||||
Sbjct: 41  gctctccgcgccgctcgcctca 20
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 17      gcccgtgctgccgacgctcgccgcg 41
               |||||||||||||||||||| ||||
Sbjct: 3570359 gcccgtgctgccgacgctcggcgcg 3570383



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     cgtgctgccgacgctcgccg 39
              ||||||||||||||||||||
Sbjct: 911010 cgtgctgccgacgctcgccg 911029
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>ref|NM_193857.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2148

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 gcgcgtcccgctcctcctcgc 221
           |||||||||||||||||||||
Sbjct: 204 gcgcgtcccgctcctcctcgc 224
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>emb|AL353637.21| Human DNA sequence from clone RP11-159H20 on chromosome 9q21.12-21.32
             Contains a DnaJ (Hsp40) homolog subfamily B member 5
             (DNAJB5) pseudogene, a lysophospholipase II (LYPLA2)
             pseudogene, an eukaryotic translation initiation factor 3
             subunit 1 35kDa (EIF3S1) pseudogene, the gene (possible
             pseudogene) for a novel protein similar to forkhead box B1
             (FOXB1), ATP synthase H+ transporting mitochondrial F0
             complex subunit f isoform 2 (ATP5J2) pseudogene and three
             CpG islands, complete sequence
          Length = 146466

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 538   aactcagaggagcaggagcaaaaat 562
             ||||||||||||||| |||||||||
Sbjct: 78420 aactcagaggagcagaagcaaaaat 78444
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>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12
          Length = 348672

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    gggaagaagaatcacgccgct 265
              |||||||||||||||||||||
Sbjct: 303641 gggaagaagaatcacgccgct 303621
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 14     catgcccgtgctgccgacgctcgccgcgccgctgctc 50
              ||||||| |||||| ||||||  ||||||||||||||
Sbjct: 141591 catgcccttgctgcagacgctgaccgcgccgctgctc 141627
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 14    catgcccgtgctgccgacgctcgccgcgccgctgctc 50
             ||||||| |||||| ||||||  ||||||||||||||
Sbjct: 60795 catgcccttgctgcagacgctgaccgcgccgctgctc 60831
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>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 14    catgcccgtgctgccgacgctcgccgcgccgctgctc 50
             ||||||| |||||| ||||||  ||||||||||||||
Sbjct: 48695 catgcccttgctgcagacgctgaccgcgccgctgctc 48731
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>ref|NM_136209.2| Drosophila melanogaster CG9318-RA (CG9318), mRNA
          Length = 2582

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 293  ctgctgtgctactttcacttg 313
            |||||||||||||||||||||
Sbjct: 1958 ctgctgtgctactttcacttg 1978
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>gb|AY069665.1| Drosophila melanogaster LD44273 full length cDNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 293  ctgctgtgctactttcacttg 313
            |||||||||||||||||||||
Sbjct: 1932 ctgctgtgctactttcacttg 1952
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>gb|AC093047.1| Drosophila melanogaster, chromosome 2L, region 38D-38E, BAC clone
              BACR31P14, complete sequence
          Length = 156806

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 293    ctgctgtgctactttcacttg 313
              |||||||||||||||||||||
Sbjct: 130611 ctgctgtgctactttcacttg 130591
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 355      atgccatctgcagatcattat 375
                |||||||||||||||||||||
Sbjct: 28603474 atgccatctgcagatcattat 28603494
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 201      gcgcgtcccgctcctcctcgc 221
                |||||||||||||||||||||
Sbjct: 15375662 gcgcgtcccgctcctcctcgc 15375682
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>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
            BACR07D17, complete sequence
          Length = 173422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 293  ctgctgtgctactttcacttg 313
            |||||||||||||||||||||
Sbjct: 1213 ctgctgtgctactttcacttg 1193
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>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1045D11
          Length = 142320

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 201   gcgcgtcccgctcctcctcgc 221
             |||||||||||||||||||||
Sbjct: 53203 gcgcgtcccgctcctcctcgc 53223
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>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1039D07
          Length = 135301

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 201    gcgcgtcccgctcctcctcgc 221
              |||||||||||||||||||||
Sbjct: 117021 gcgcgtcccgctcctcctcgc 117041
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   atgccatctgcagatcattat 375
             |||||||||||||||||||||
Sbjct: 94952 atgccatctgcagatcattat 94972
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0622F03
          Length = 170064

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 355  atgccatctgcagatcattat 375
            |||||||||||||||||||||
Sbjct: 4040 atgccatctgcagatcattat 4060
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>dbj|AK107175.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G08, full
           insert sequence
          Length = 2331

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 gcgcgtcccgctcctcctcgc 221
           |||||||||||||||||||||
Sbjct: 246 gcgcgtcccgctcctcctcgc 266
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>emb|BX545847.9| Zebrafish DNA sequence from clone RP71-14M1 in linkage group 19,
             complete sequence
          Length = 128770

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 209   cgctcctcctcgctgctctcc 229
             |||||||||||||||||||||
Sbjct: 54021 cgctcctcctcgctgctctcc 54001
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>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the complete
              sequence
          Length = 257666

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 293    ctgctgtgctactttcacttg 313
              |||||||||||||||||||||
Sbjct: 248633 ctgctgtgctactttcacttg 248613
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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 293   ctgctgtgctactttcacttg 313
             |||||||||||||||||||||
Sbjct: 88322 ctgctgtgctactttcacttg 88342
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>ref|XM_481072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccaccggcgccgacgtcc 166
           ||||||||||||||||||||
Sbjct: 70  cgccaccggcgccgacgtcc 51
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>ref|XM_475769.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 tcgccaccggcgccgacgtc 165
           ||||||||||||||||||||
Sbjct: 542 tcgccaccggcgccgacgtc 523
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>ref|NM_001030595.1| Gallus gallus Rho guanine nucleotide exchange factor (GEF) 3
           (ARHGEF3), mRNA
          Length = 3727

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 202 cgcgtcccgctcctcctcgctgct 225
           |||||||||||||| |||||||||
Sbjct: 17  cgcgtcccgctcctgctcgctgct 40
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>ref|XM_463823.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2533

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  ccgacgctcgccgcgccgct 46
           ||||||||||||||||||||
Sbjct: 309 ccgacgctcgccgcgccgct 328
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>ref|XM_450120.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 402

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 cgccaccggcgccgacgtcc 166
           ||||||||||||||||||||
Sbjct: 70  cgccaccggcgccgacgtcc 51
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>ref|XM_514362.1| PREDICTED: Pan troglodytes similar to calsyntenin 1; non-classical
            cadherin XB31alpha1; alcadein (LOC457923), mRNA
          Length = 7077

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 6999 ctcctcctcgctgctctccg 6980
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>gb|AY753301.1| Homo sapiens alcadein alpha-1 mRNA, complete cds
          Length = 2916

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 2838 ctcctcctcgctgctctccg 2819
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>ref|XM_593913.2| PREDICTED: Bos taurus similar to Iroquois related homeobox 3
            (LOC540417), mRNA
          Length = 2539

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  ccgcgccgctcgcctcaggg 247
            ||||||||||||||||||||
Sbjct: 1753 ccgcgccgctcgcctcaggg 1772
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 25      tgccgacgctcgccgcgccg 44
               ||||||||||||||||||||
Sbjct: 2331397 tgccgacgctcgccgcgccg 2331416
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>ref|XM_416507.1| PREDICTED: Gallus gallus similar to Zinc finger protein 384 (Nuclear
            matrix transcription factor 4) (CAG repeat protein 1)
            (LOC418282), mRNA
          Length = 3068

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 116  cgaagggcaggctcttgcacccgg 139
            |||||||||||||||||| |||||
Sbjct: 1604 cgaagggcaggctcttgcgcccgg 1627
to top
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tcgccaccggcgccgacgtc 165
             ||||||||||||||||||||
Sbjct: 46727 tcgccaccggcgccgacgtc 46708
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 182     cgctcccggaaccagagcagcgcg 205
               |||||| |||||||||||||||||
Sbjct: 5756483 cgctcctggaaccagagcagcgcg 5756506
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>gb|AC159963.7| Mus musculus chromosome 15, clone RP23-338F23, complete sequence
          Length = 228337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   aggcttagctggccaaggat 484
             ||||||||||||||||||||
Sbjct: 72503 aggcttagctggccaaggat 72522
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      tcctccgccaccgcccaccg 87
               ||||||||||||||||||||
Sbjct: 5721766 tcctccgccaccgcccaccg 5721785
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 146     tcgccaccggcgccgacgtc 165
               ||||||||||||||||||||
Sbjct: 1586908 tcgccaccggcgccgacgtc 1586927
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>gb|AF438482.1| Homo sapiens non-classical cadherin XB31alpha1 (XB31alpha) mRNA,
            complete cds
          Length = 4965

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 3597 ctcctcctcgctgctctccg 3578
to top
>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains two
             novel genes, a ribosomal protein L26-like 1 pseudogene
             (RPL26L1), the PIK3CD gene for phosphoinositide-3-kinase,
             catalytic, delta polypeptide, the 3' end of the CLSTN1
             gene for calsyntenin 1 and a CpG island, complete sequence
          Length = 163934

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   ctcctcctcgctgctctccg 230
             ||||||||||||||||||||
Sbjct: 97387 ctcctcctcgctgctctccg 97406
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>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the
             INA gene for internexin neuronal intermediate filament
             protein alpha, the RNF134 gene for ring finger protein
             134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA
             box binding protein (TBP)-associated factor, a novel gene,
             the 5' end of the PDCD11 gene for programmed cell death 11
             and four CpG islands, complete sequence
          Length = 174474

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   tctcgtctctcctttaatgccatc 362
             |||||| |||||||||||||||||
Sbjct: 50407 tctcgtttctcctttaatgccatc 50384
to top
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 146    tcgccaccggcgccgacgtccccggctg 173
              ||||||||||||||| ||||| ||||||
Sbjct: 105776 tcgccaccggcgccgccgtcctcggctg 105803
to top
>gb|BC033902.2| Homo sapiens calsyntenin 1, transcript variant 2, mRNA (cDNA clone
            MGC:33741 IMAGE:5263192), complete cds
          Length = 4663

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 3089 ctcctcctcgctgctctccg 3070
to top
>emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chromosome 11 Contains part
              of a novel gene, a heat shock protein (Hsp) pseudogene and
              a CpG island, complete sequence
          Length = 160470

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    agatatcttgatgagaaact 407
              ||||||||||||||||||||
Sbjct: 114879 agatatcttgatgagaaact 114898
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>emb|AJ719610.1| Gallus gallus mRNA for hypothetical protein, clone 4i12
          Length = 3727

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 202 cgcgtcccgctcctcctcgctgct 225
           |||||||||||||| |||||||||
Sbjct: 17  cgcgtcccgctcctgctcgctgct 40
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>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence
          Length = 237498

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    agatatcttgatgagaaact 407
              ||||||||||||||||||||
Sbjct: 223562 agatatcttgatgagaaact 223581
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>ref|NM_001037465.1| Bos taurus spleen tyrosine kinase (SYK), mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 cccgctcctcctcgctgctc 226
           ||||||||||||||||||||
Sbjct: 40  cccgctcctcctcgctgctc 21
to top
>dbj|AK056820.1| Homo sapiens cDNA FLJ32258 fis, clone PROST1000272, weakly similar
           to Homo sapiens mRNA for calsyntenin-2 (CS2 gene)
          Length = 2169

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ctcctcctcgctgctctccg 230
           ||||||||||||||||||||
Sbjct: 611 ctcctcctcgctgctctccg 592
to top
>dbj|AK001591.1| Homo sapiens cDNA FLJ10729 fis, clone NT2RP3001260, highly similar
           to Homo sapiens mRNA for KIAA0911 protein
          Length = 2497

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 ctcctcctcgctgctctccg 230
           ||||||||||||||||||||
Sbjct: 939 ctcctcctcgctgctctccg 920
to top
>ref|NM_014944.3| Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 2, mRNA
          Length = 5179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 3597 ctcctcctcgctgctctccg 3578
to top
>ref|NM_001009566.1| Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 1, mRNA
          Length = 5209

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 3627 ctcctcctcgctgctctccg 3608
to top
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcctccgccaccgcccaccg 87
              ||||||||||||||||||||
Sbjct: 109405 tcctccgccaccgcccaccg 109386
to top
>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   ggctcttcgccaccggcgcc 159
             ||||||||||||||||||||
Sbjct: 19132 ggctcttcgccaccggcgcc 19151
to top
>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    cagattgttttattgacaga 442
              ||||||||||||||||||||
Sbjct: 532107 cagattgttttattgacaga 532126
to top
>gb|S77386.1| ferritin middle subunit [Salmo salar=Atlantic salmon, liver, mRNA,
           1010 nt]
          Length = 1010

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 206 tcccgctcctcctcgctgctctcc 229
           |||||||||||||||||| |||||
Sbjct: 373 tcccgctcctcctcgctgttctcc 350
to top
>gb|AC138559.3| Lemur catta clone LB2-251E18, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   cagattgttttattgacaga 442
             ||||||||||||||||||||
Sbjct: 29842 cagattgttttattgacaga 29861
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 184     ctcccggaaccagagcagcg 203
               ||||||||||||||||||||
Sbjct: 2113119 ctcccggaaccagagcagcg 2113100
to top
>gb|BC108086.1| Bos taurus cDNA clone MGC:127145 IMAGE:7944116, complete cds
          Length = 2532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 cccgctcctcctcgctgctc 226
           ||||||||||||||||||||
Sbjct: 40  cccgctcctcctcgctgctc 21
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     cgccaccggcgccgacgtcc 166
               ||||||||||||||||||||
Sbjct: 1836871 cgccaccggcgccgacgtcc 1836852
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 147     cgccaccggcgccgacgtcc 166
               ||||||||||||||||||||
Sbjct: 9640226 cgccaccggcgccgacgtcc 9640245
to top
>gb|AF348319.1|AF348319 Zea mays TERMINAL EAR1 (te1) gene, complete cds
          Length = 8039

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  cttcgccaccggcgccgacg 163
            ||||||||||||||||||||
Sbjct: 3833 cttcgccaccggcgccgacg 3852
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      tcgccaccggcgccgacgtc 165
                ||||||||||||||||||||
Sbjct: 26402036 tcgccaccggcgccgacgtc 26402017
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 68      tcctccgccaccgcccaccg 87
               ||||||||||||||||||||
Sbjct: 5720979 tcctccgccaccgcccaccg 5720998
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ccgacgctcgccgcgccgct 46
              ||||||||||||||||||||
Sbjct: 564121 ccgacgctcgccgcgccgct 564102
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>gb|AC092169.4| Homo sapiens BAC clone RP11-791I11 from 2, complete sequence
          Length = 192927

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tattgatccatatgctgctg 298
              ||||||||||||||||||||
Sbjct: 176023 tattgatccatatgctgctg 176004
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>gb|AE009603.1| Brucella melitensis 16M chromosome I, section 160 of 195 of the
            complete sequence
          Length = 10937

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  tcagatcccctttttattgatcca 288
            ||||||||| ||||||||||||||
Sbjct: 1722 tcagatcccttttttattgatcca 1745
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>gb|AC013440.7| Homo sapiens BAC clone RP11-292A20 from 2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tattgatccatatgctgctg 298
              ||||||||||||||||||||
Sbjct: 151862 tattgatccatatgctgctg 151843
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ccgacgctcgccgcgccgct 46
             ||||||||||||||||||||
Sbjct: 42174 ccgacgctcgccgcgccgct 42155
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 20      cgtgctgccgacgctcgccg 39
               ||||||||||||||||||||
Sbjct: 5577964 cgtgctgccgacgctcgccg 5577983



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     gccgacgctcgccgcgccgc 45
              ||||||||||||||||||||
Sbjct: 772325 gccgacgctcgccgcgccgc 772344
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    tcagatcccctttttattgatcca 288
              ||||||||| ||||||||||||||
Sbjct: 275147 tcagatcccttttttattgatcca 275124
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>emb|BX248985.6| Zebrafish DNA sequence from clone CH211-192N18 in linkage group 12,
             complete sequence
          Length = 167140

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cccgctcctcctcgctgctc 226
             ||||||||||||||||||||
Sbjct: 14385 cccgctcctcctcgctgctc 14404
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>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1227_D07
          Length = 118358

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cgccaccggcgccgacgtcc 166
             ||||||||||||||||||||
Sbjct: 75533 cgccaccggcgccgacgtcc 75514
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>dbj|AB020718.1| Homo sapiens mRNA for KIAA0911 protein, partial cds
          Length = 5219

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 3661 ctcctcctcgctgctctccg 3642
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>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1015H11
          Length = 156897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cgccaccggcgccgacgtcc 166
             ||||||||||||||||||||
Sbjct: 37706 cgccaccggcgccgacgtcc 37725
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>dbj|AK000605.1| Homo sapiens cDNA FLJ20598 fis, clone KAT07882, highly similar to
            AB020718 Homo sapiens mRNA for KIAA0911 protein
          Length = 3849

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  ctcctcctcgctgctctccg 230
            ||||||||||||||||||||
Sbjct: 2271 ctcctcctcgctgctctccg 2252
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>dbj|AK073200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023K10, full
           insert sequence
          Length = 2533

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 27  ccgacgctcgccgcgccgct 46
           ||||||||||||||||||||
Sbjct: 309 ccgacgctcgccgcgccgct 328
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>gb|AC005753.1|AC005753 Homo sapiens chromosome 5, P1 clone 254f11 (LBNL H164), complete
             sequence
          Length = 120452

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   cgtcccgctcctcctcgctgctct 227
             ||||||||||||||| ||||||||
Sbjct: 50674 cgtcccgctcctccttgctgctct 50651
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>dbj|AK115591.1| Ciona intestinalis cDNA, clone:cilv005o09, full insert sequence
          Length = 1145

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 gtgttctgtttcatactcct 593
           ||||||||||||||||||||
Sbjct: 790 gtgttctgtttcatactcct 771
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     atgcccgtgctgccgacgct 34
              ||||||||||||||||||||
Sbjct: 513711 atgcccgtgctgccgacgct 513692
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 31      cgctcgccgcgccgctgctc 50
               ||||||||||||||||||||
Sbjct: 1070977 cgctcgccgcgccgctgctc 1070996
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>gb|AF047852.1|AF047852 Zea mays terminal ear1 mRNA, complete cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 cttcgccaccggcgccgacg 163
           ||||||||||||||||||||
Sbjct: 613 cttcgccaccggcgccgacg 632
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
              strain 2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 265    tcagatcccctttttattgatcca 288
              ||||||||| ||||||||||||||
Sbjct: 271513 tcagatcccttttttattgatcca 271490


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,082,006
Number of Sequences: 3902068
Number of extensions: 6082006
Number of successful extensions: 186509
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 185001
Number of HSP's gapped (non-prelim): 1508
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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