ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9n09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470491.1| Oryza sativa (japonica cultivar-group), mRNA 373 e-100
2dbj|AK100745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 373 e-100
3dbj|AK072679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 373 e-100
4gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full... 264 3e-67
5gb|AY109392.1| Zea mays CL1001_1 mRNA sequence 256 6e-65
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 1e-23
7gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 119 1e-23
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9ref|NM_121708.2| Arabidopsis thaliana XPO1A; protein transporter... 101 2e-18
10gb|AY096633.1| Arabidopsis thaliana putative Exportin1 (XPO1) pr... 101 2e-18
11gb|AY056126.1| Arabidopsis thaliana putative exportin1 protein X... 101 2e-18
12emb|Y18469.1|ATHY18469 Arabidopsis thaliana mRNA for Exportin1 (... 101 2e-18
13ref|NM_111181.2| Arabidopsis thaliana XPO1B; protein transporter... 100 9e-18
14gb|AF367278.1|AF367278 Arabidopsis thaliana AT3g03110/T17B22_20 ... 100 9e-18
15gb|BT004508.1| Arabidopsis thaliana At3g03110/T17B22_20 gene, co... 100 9e-18
16emb|AJ277542.1|ATH277542 Arabidopsis thaliana mRNA for exportin ... 100 9e-18
17gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC... 88 3e-14
18emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BA... 88 3e-14
19emb|Y18470.1|ATHY18470 Arabidopsis thaliana xpo1 gene 88 3e-14
20gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete s... 68 3e-08
21dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone... 64 5e-07
22dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 64 5e-07
23gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete se... 56 1e-04
24emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chro... 48 0.030
25gb|AC132007.2| Homo sapiens 3 BAC CTD-2230D16 (Cal Tech Human BA... 44 0.46
26gb|BC040632.1| Homo sapiens, clone IMAGE:5759975, mRNA 44 0.46
27ref|XM_630041.1| Dictyostelium discoideum hypothetical protein (... 42 1.8
28emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 1.8
29gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 42 1.8
30gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, co... 40 7.2
31gb|AC009070.12| Homo sapiens chromosome 16 clone RP11-314O13, co... 40 7.2
32ref|XM_799483.1| Trypanosoma cruzi strain CL Brener serine/threo... 40 7.2
33ref|XM_802776.1| Trypanosoma cruzi strain CL Brener serine/threo... 40 7.2
34gb|AC110034.8| Mus musculus chromosome 3, clone RP23-237L12, com... 40 7.2
35ref|XM_740805.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.2
36gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete s... 40 7.2
37gb|AC156607.5| Mus musculus chromosome 1, clone RP23-230A23, com... 40 7.2
38ref|XM_786159.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.2
39emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chr... 40 7.2
40gb|AC104978.2| Homo sapiens chromosome 11, clone RP11-244O16, co... 40 7.2
41gb|AC023206.6| Homo sapiens chromosome 11, clone RP11-797J4, com... 40 7.2
42gb|AC099313.3| Homo sapiens chromosome 16 clone CTD-2055G21, com... 40 7.2
43gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 40 7.2
44dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 7.2
45dbj|AB025620.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.2
46gb|AC155254.1| Mus musculus BAC clone RP24-174G4 from 16, comple... 40 7.2
47gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, comple... 40 7.2
48dbj|AB216993.1| Equus caballus DNA, microsatellite TKY3050 40 7.2 
>ref|XM_470491.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3679

 Score =  373 bits (188), Expect = e-100
 Identities = 373/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 2455 gtgcctcgcatatttgaggctgttttccagtgcactcttgagatgatcactaaaaacttt 2514

                                                                        
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctatcggcactcat 124
            |||||||| || ||||| |||||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 2515 gaagattacccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccat 2574

                                                                        
Query: 125  tgcttcaaagctttaattcagctttccagccagcaattgaagcttgtgattgattcgatt 184
            |||||| |||| |||||||||||||| || ||||||||||| ||||||||||| || || 
Sbjct: 2575 tgcttccaagcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatc 2634

                                                                        
Query: 185  aactgggcatttagacatacagagagaaacattgccgagaccggccttagtctattgttg 244
            |||||||||||||||||||||||||||||||| || ||||| || || ||||||||| ||
Sbjct: 2635 aactgggcatttagacatacagagagaaacatcgcagagactggtctcagtctattgctg 2694

                                                                        
Query: 245  gaaattctgaagaattttcaggcttcagaattcacgaatcagttctacaagacatatttt 304
            |||||| | ||||| |||||||| |||| ||||   ||||| |||||||| || ||||||
Sbjct: 2695 gaaattttaaagaactttcaggcctcaggattccaaaatcaattctacaaaacttatttt 2754

                                                                        
Query: 305  ttgaatatagagcaggagatttttgcagttctcacagattcatttcataaacctggattc 364
            |||||||| || || ||||| ||||||||||| |||||  |||| || || ||||| |||
Sbjct: 2755 ttgaatattgaacaagagatctttgcagttctgacagacacattccacaagcctggtttc 2814

                                                                        
Query: 365  aaacttcatgttttggtgcttcaacacttgttttgcgtggttgacagcctaactgaacct 424
            || ||||||||||||||||| || ||||| ||||| ||||||||  | || || || |||
Sbjct: 2815 aagcttcatgttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcct 2874

                           
Query: 425  ctatgggatgcatcc 439
            || ||||||||||||
Sbjct: 2875 ctctgggatgcatcc 2889
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>dbj|AK100745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118H18, full
            insert sequence
          Length = 3882

 Score =  373 bits (188), Expect = e-100
 Identities = 373/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 2692 gtgcctcgcatatttgaggctgttttccagtgcactcttgagatgatcactaaaaacttt 2751

                                                                        
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctatcggcactcat 124
            |||||||| || ||||| |||||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 2752 gaagattacccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccat 2811

                                                                        
Query: 125  tgcttcaaagctttaattcagctttccagccagcaattgaagcttgtgattgattcgatt 184
            |||||| |||| |||||||||||||| || ||||||||||| ||||||||||| || || 
Sbjct: 2812 tgcttccaagcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatc 2871

                                                                        
Query: 185  aactgggcatttagacatacagagagaaacattgccgagaccggccttagtctattgttg 244
            |||||||||||||||||||||||||||||||| || ||||| || || ||||||||| ||
Sbjct: 2872 aactgggcatttagacatacagagagaaacatcgcagagactggtctcagtctattgctg 2931

                                                                        
Query: 245  gaaattctgaagaattttcaggcttcagaattcacgaatcagttctacaagacatatttt 304
            |||||| | ||||| |||||||| |||| ||||   ||||| |||||||| || ||||||
Sbjct: 2932 gaaattttaaagaactttcaggcctcaggattccaaaatcaattctacaaaacttatttt 2991

                                                                        
Query: 305  ttgaatatagagcaggagatttttgcagttctcacagattcatttcataaacctggattc 364
            |||||||| || || ||||| ||||||||||| |||||  |||| || || ||||| |||
Sbjct: 2992 ttgaatattgaacaagagatctttgcagttctgacagacacattccacaagcctggtttc 3051

                                                                        
Query: 365  aaacttcatgttttggtgcttcaacacttgttttgcgtggttgacagcctaactgaacct 424
            || ||||||||||||||||| || ||||| ||||| ||||||||  | || || || |||
Sbjct: 3052 aagcttcatgttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcct 3111

                           
Query: 425  ctatgggatgcatcc 439
            || ||||||||||||
Sbjct: 3112 ctctgggatgcatcc 3126
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>dbj|AK072679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136O19, full
           insert sequence
          Length = 1597

 Score =  373 bits (188), Expect = e-100
 Identities = 373/435 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
           |||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 399 gtgcctcgcatatttgaggctgttttccagtgcactcttgagatgatcactaaaaacttt 458

                                                                       
Query: 65  gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctatcggcactcat 124
           |||||||| || ||||| |||||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 459 gaagattacccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccat 518

                                                                       
Query: 125 tgcttcaaagctttaattcagctttccagccagcaattgaagcttgtgattgattcgatt 184
           |||||| |||| |||||||||||||| || ||||||||||| ||||||||||| || || 
Sbjct: 519 tgcttccaagcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatc 578

                                                                       
Query: 185 aactgggcatttagacatacagagagaaacattgccgagaccggccttagtctattgttg 244
           |||||||||||||||||||||||||||||||| || ||||| || || ||||||||| ||
Sbjct: 579 aactgggcatttagacatacagagagaaacatcgcagagactggtctcagtctattgctg 638

                                                                       
Query: 245 gaaattctgaagaattttcaggcttcagaattcacgaatcagttctacaagacatatttt 304
           |||||| | ||||| |||||||| |||| ||||   ||||| |||||||| || ||||||
Sbjct: 639 gaaattttaaagaactttcaggcctcaggattccaaaatcaattctacaaaacttatttt 698

                                                                       
Query: 305 ttgaatatagagcaggagatttttgcagttctcacagattcatttcataaacctggattc 364
           |||||||| || || ||||| ||||||||||| |||||  |||| || || ||||| |||
Sbjct: 699 ttgaatattgaacaagagatctttgcagttctgacagacacattccacaagcctggtttc 758

                                                                       
Query: 365 aaacttcatgttttggtgcttcaacacttgttttgcgtggttgacagcctaactgaacct 424
           || ||||||||||||||||| || ||||| ||||| ||||||||  | || || || |||
Sbjct: 759 aagcttcatgttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcct 818

                          
Query: 425 ctatgggatgcatcc 439
           || ||||||||||||
Sbjct: 819 ctctgggatgcatcc 833
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>gb|BT009586.1| Triticum aestivum clone wre1n.pk0047.b2:fis, full insert mRNA
           sequence
          Length = 890

 Score =  264 bits (133), Expect = 3e-67
 Identities = 157/165 (95%)
 Strand = Plus / Plus

                                                                       
Query: 362 ttcaaacttcatgttttggtgcttcaacacttgttttgcgtggttgacagcctaactgaa 421
           ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||
Sbjct: 8   ttcaaacttcatgttttggtgctacaacacttgttttgtgtggttgatggcctaactgaa 67

                                                                       
Query: 422 cctctatgggatgcatccacggtatcatatccatctaatgccttgtttgtacgggactac 481
           |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 68  cctctatgggatgcatccacggcatcatatccatctaatgccatgtttgtacgggactac 127

                                                        
Query: 482 acaatcaaacttcttggggcatcatttcctaacatgacggtagct 526
           ||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 128 acaatcaaacttcttggagcatcatttcctaacatgacggcagct 172
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>gb|AY109392.1| Zea mays CL1001_1 mRNA sequence
          Length = 2488

 Score =  256 bits (129), Expect = 6e-65
 Identities = 214/245 (87%)
 Strand = Plus / Minus

                                                                        
Query: 2    gatgtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaac 61
            ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||
Sbjct: 1409 gatgtgcctcgtatatttgaggctgttttccagtgcacccttgagatgattactaagaac 1350

                                                                        
Query: 62   tttgaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctatcggcact 121
            |||||||||||||||||||||||||||||        |||| |||||||| || ||||| 
Sbjct: 1349 tttgaagattatcctgagcaccgcctcaaannnnnnnctttgcttcgtgcaattggcacc 1290

                                                                        
Query: 122  cattgcttcaaagctttaattcagctttccagccagcaattgaagcttgtgattgattcg 181
            ||||||||| |||| ||||| |||||||| || |||||||||||||||||||| ||||| 
Sbjct: 1289 cattgcttccaagcattaatccagctttcaagtcagcaattgaagcttgtgatcgattca 1230

                                                                        
Query: 182  attaactgggcatttagacatacagagagaaacattgccgagaccggccttagtctattg 241
            ||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| || |||
Sbjct: 1229 attaattgggcgttcagacatacagagagaaatattgcagagactggccttagcctgttg 1170

                 
Query: 242  ttgga 246
            |||||
Sbjct: 1169 ttgga 1165



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                        
Query: 329  gcagttctcacagattcatttcataaacctggattcaaacttcatgttttggtgcttcaa 388
            ||||| ||||||||  |||| ||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 1082 gcagtcctcacagacacattccataaacctggtttcaagcttcatgtttcggtgctacaa 1023

                       
Query: 389  cacttgttttg 399
            |||||||||||
Sbjct: 1022 cacttgttttg 1012
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                            
Query: 47       atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
                ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||||| |||
Sbjct: 35910832 atgatcactaaaaactttgaagattacccggagcatcgcctcaaatttttctctttgctt 35910773

                                                            
Query: 107      cgtgctatcggcactcattgcttcaaagctttaattcagctttc 150
                ||||| || ||||| ||||||||| |||| ||||||||||||||
Sbjct: 35910772 cgtgcgattggcacccattgcttccaagcattaattcagctttc 35910729



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Minus

                                                                            
Query: 155      cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
                ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 35910596 cagcaattgaaacttgtgattgactctatcaactgggcatttagacatacagagagaaac 35910537

                                                                    
Query: 215      attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
                || || ||||| || || ||||||||| |||||||| | ||||| |||||||
Sbjct: 35910536 atcgcagagactggtctcagtctattgctggaaattttaaagaactttcagg 35910485



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 281      aatcagttctacaagacatattttttgaatatagagcaggagatttttgcagttctcaca 340
                ||||| |||||||| || |||||||||||||| || || ||||| ||||||||||| |||
Sbjct: 35910390 aatcaattctacaaaacttattttttgaatattgaacaagagatctttgcagttctgaca 35910331

                                                                            
Query: 341      gattcatttcataaacctggattcaaacttcatgttttggtgcttcaacacttgttttgc 400
                ||  |||| || || ||||| ||||| ||||||||||||||||| || ||||| ||||| 
Sbjct: 35910330 gacacattccacaagcctggtttcaagcttcatgttttggtgctgcagcacttattttgt 35910271

                     
Query: 401      gtggt 405
                |||||
Sbjct: 35910270 gtggt 35910266



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 5        gtgcctcgtatattcgaggctgttttccagtgtacccttga 45
                |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 35910960 gtgcctcgcatatttgaggctgttttccagtgcactcttga 35910920



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 497      ggggcatcatttcctaacatg 517
                |||||||||||||||||||||
Sbjct: 31760978 ggggcatcatttcctaacatg 31760958
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Plus

                                                                         
Query: 155   cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
             ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 50529 cagcaattgaaacttgtgattgactctatcaactgggcatttagacatacagagagaaac 50588

                                                                 
Query: 215   attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
             || || ||||| || || ||||||||| |||||||| | ||||| |||||||
Sbjct: 50589 atcgcagagactggtctcagtctattgctggaaattttaaagaactttcagg 50640



 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                         
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
             ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||||| |||
Sbjct: 50293 atgatcactaaaaactttgaagattacccggagcatcgcctcaaatttttctctttgctt 50352

                                                         
Query: 107   cgtgctatcggcactcattgcttcaaagctttaattcagctttc 150
             ||||| || ||||| ||||||||| |||| ||||||||||||||
Sbjct: 50353 cgtgcgattggcacccattgcttccaagcattaattcagctttc 50396



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                         
Query: 281   aatcagttctacaagacatattttttgaatatagagcaggagatttttgcagttctcaca 340
             ||||| |||||||| || |||||||||||||| || || ||||| ||||||||||| |||
Sbjct: 50735 aatcaattctacaaaacttattttttgaatattgaacaagagatctttgcagttctgaca 50794

                                                                         
Query: 341   gattcatttcataaacctggattcaaacttcatgttttggtgcttcaacacttgttttgc 400
             ||  |||| || || ||||| ||||| ||||||||||||||||| || ||||| ||||| 
Sbjct: 50795 gacacattccacaagcctggtttcaagcttcatgttttggtgctgcagcacttattttgt 50854

                  
Query: 401   gtggt 405
             |||||
Sbjct: 50855 gtggt 50859



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 5     gtgcctcgtatattcgaggctgttttccagtgtacccttga 45
             |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 50165 gtgcctcgcatatttgaggctgttttccagtgcactcttga 50205
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                            
Query: 47       atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
                ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||||| |||
Sbjct: 36000962 atgatcactaaaaactttgaagattacccggagcatcgcctcaaatttttctctttgctt 36000903

                                                            
Query: 107      cgtgctatcggcactcattgcttcaaagctttaattcagctttc 150
                ||||| || ||||| ||||||||| |||| ||||||||||||||
Sbjct: 36000902 cgtgcgattggcacccattgcttccaagcattaattcagctttc 36000859



 Score =  119 bits (60), Expect = 1e-23
 Identities = 99/112 (88%)
 Strand = Plus / Minus

                                                                            
Query: 155      cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
                ||||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 36000726 cagcaattgaaacttgtgattgactctatcaactgggcatttagacatacagagagaaac 36000667

                                                                    
Query: 215      attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
                || || ||||| || || ||||||||| |||||||| | ||||| |||||||
Sbjct: 36000666 atcgcagagactggtctcagtctattgctggaaattttaaagaactttcagg 36000615



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 281      aatcagttctacaagacatattttttgaatatagagcaggagatttttgcagttctcaca 340
                ||||| |||||||| || |||||||||||||| || || ||||| ||||||||||| |||
Sbjct: 36000520 aatcaattctacaaaacttattttttgaatattgaacaagagatctttgcagttctgaca 36000461

                                                                            
Query: 341      gattcatttcataaacctggattcaaacttcatgttttggtgcttcaacacttgttttgc 400
                ||  |||| || || ||||| ||||| ||||||||||||||||| || ||||| ||||| 
Sbjct: 36000460 gacacattccacaagcctggtttcaagcttcatgttttggtgctgcagcacttattttgt 36000401

                     
Query: 401      gtggt 405
                |||||
Sbjct: 36000400 gtggt 36000396



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 5        gtgcctcgtatattcgaggctgttttccagtgtacccttga 45
                |||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 36001090 gtgcctcgcatatttgaggctgttttccagtgcactcttga 36001050



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 497      ggggcatcatttcctaacatg 517
                |||||||||||||||||||||
Sbjct: 31851494 ggggcatcatttcctaacatg 31851474
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>ref|NM_121708.2| Arabidopsis thaliana XPO1A; protein transporter AT5G17020 (XPO1A)
            mRNA, complete cds
          Length = 3884

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||  ||||| || ||||| |||||||||||  | || ||||| ||||| ||||||
Sbjct: 2632 gtgcctcacatatttgaagctgtattccagtgtacattggagatgataactaagaacttt 2691

                                                              
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            ||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 2692 gaagattatccagaacaccgcctcaagtttttctcattactccgtgctat 2741



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 157  gcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaacat 216
            |||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||
Sbjct: 2784 gcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaatat 2843

                             
Query: 217  tgccgagaccggcctta 233
            ||| || ||||| ||||
Sbjct: 2844 tgctgaaaccgggctta 2860
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>gb|AY096633.1| Arabidopsis thaliana putative Exportin1 (XPO1) protein (At5g17020)
            mRNA, complete cds
          Length = 3259

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||  ||||| || ||||| |||||||||||  | || ||||| ||||| ||||||
Sbjct: 2464 gtgcctcacatatttgaagctgtattccagtgtacattggagatgataactaagaacttt 2523

                                                              
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            ||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 2524 gaagattatccagaacaccgcctcaagtttttctcattactccgtgctat 2573



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 157  gcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaacat 216
            |||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||
Sbjct: 2616 gcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaatat 2675

                             
Query: 217  tgccgagaccggcctta 233
            ||| || ||||| ||||
Sbjct: 2676 tgctgaaaccgggctta 2692
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>gb|AY056126.1| Arabidopsis thaliana putative exportin1 protein XPO1 (At5g17020)
            mRNA, complete cds
          Length = 3854

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||  ||||| || ||||| |||||||||||  | || ||||| ||||| ||||||
Sbjct: 2632 gtgcctcacatatttgaagctgtattccagtgtacattggagatgataactaagaacttt 2691

                                                              
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            ||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 2692 gaagattatccagaacaccgcctcaagtttttctcattactccgtgctat 2741



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 157  gcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaacat 216
            |||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||
Sbjct: 2784 gcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaatat 2843

                             
Query: 217  tgccgagaccggcctta 233
            ||| || ||||| ||||
Sbjct: 2844 tgctgaaaccgggctta 2860
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>emb|Y18469.1|ATHY18469 Arabidopsis thaliana mRNA for Exportin1 (XPO1) protein
          Length = 3768

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/110 (86%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgcctcgtatattcgaggctgttttccagtgtacccttganatgattactaaaaacttt 64
            |||||||  ||||| || ||||| |||||||||||  | || ||||| ||||| ||||||
Sbjct: 2559 gtgcctcacatatttgaagctgtattccagtgtacattggagatgataactaagaacttt 2618

                                                              
Query: 65   gaagattatcctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            ||||||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 2619 gaagattatccagaacaccgcctcaagtttttctcattactccgtgctat 2668



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 157  gcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaacat 216
            |||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| ||
Sbjct: 2711 gcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaatat 2770

                             
Query: 217  tgccgagaccggcctta 233
            ||| || ||||| ||||
Sbjct: 2771 tgctgaaaccgggctta 2787
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>ref|NM_111181.2| Arabidopsis thaliana XPO1B; protein transporter AT3G03110 (XPO1B)
            mRNA, complete cds
          Length = 3475

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                        
Query: 14   atattcgaggctgttttccagtgtacccttganatgattactaaaaactttgaagattat 73
            ||||| || |||||||||||||| ||  | || ||||||||||| || ||||||||||| 
Sbjct: 2506 atatttgaagctgttttccagtgcacattggagatgattactaagaattttgaagattac 2565

                                                     
Query: 74   cctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 2566 ccagagcaccgtctcaagtttttctcgttacttcgtgctat 2606



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 156  agcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaa 213
            ||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| || |||||
Sbjct: 2648 agcaactgaagctagtgatggattcagttatctgggcatttaggcatactgaaagaaa 2705
to top
>gb|AF367278.1|AF367278 Arabidopsis thaliana AT3g03110/T17B22_20 mRNA, complete cds
          Length = 1415

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 14  atattcgaggctgttttccagtgtacccttganatgattactaaaaactttgaagattat 73
           ||||| || |||||||||||||| ||  | || ||||||||||| || ||||||||||| 
Sbjct: 446 atatttgaagctgttttccagtgcacattggagatgattactaagaattttgaagattac 505

                                                    
Query: 74  cctgagcaccgcctcaagtttttctctttacttcgtgctat 114
           || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 506 ccagagcaccgtctcaagtttttctcgttacttcgtgctat 546



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 156 agcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaa 213
           ||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| || |||||
Sbjct: 588 agcaactgaagctagtgatggattcagttatctgggcatttaggcatactgaaagaaa 645
to top
>gb|BT004508.1| Arabidopsis thaliana At3g03110/T17B22_20 gene, complete cds
          Length = 1071

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 14  atattcgaggctgttttccagtgtacccttganatgattactaaaaactttgaagattat 73
           ||||| || |||||||||||||| ||  | || ||||||||||| || ||||||||||| 
Sbjct: 316 atatttgaagctgttttccagtgcacattggagatgattactaagaattttgaagattac 375

                                                    
Query: 74  cctgagcaccgcctcaagtttttctctttacttcgtgctat 114
           || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 376 ccagagcaccgtctcaagtttttctcgttacttcgtgctat 416



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 156 agcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaa 213
           ||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| || |||||
Sbjct: 458 agcaactgaagctagtgatggattcagttatctgggcatttaggcatactgaaagaaa 515
to top
>emb|AJ277542.1|ATH277542 Arabidopsis thaliana mRNA for exportin 1b (xpo1b gene)
          Length = 3261

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                        
Query: 14   atattcgaggctgttttccagtgtacccttganatgattactaaaaactttgaagattat 73
            ||||| || |||||||||||||| ||  | || ||||||||||| || ||||||||||| 
Sbjct: 2506 atatttgaagctgttttccagtgcacattggagatgattactaagaattttgaagattac 2565

                                                     
Query: 74   cctgagcaccgcctcaagtttttctctttacttcgtgctat 114
            || |||||||| |||||||||||||| ||||||||||||||
Sbjct: 2566 ccagagcaccgtctcaagtttttctcgttacttcgtgctat 2606



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 156  agcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaa 213
            ||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| || |||||
Sbjct: 2648 agcaactgaagctagtgatggattcagttatctgggcatttaggcatactgaaagaaa 2705
to top
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence,
             complete sequence
          Length = 96540

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
             ||||||||||| || ||||||||||| || |||||||| |||||||||||||| ||||||
Sbjct: 65070 atgattactaagaattttgaagattacccagagcaccgtctcaagtttttctcgttactt 65011

                     
Query: 107   cgtgctat 114
             ||||||||
Sbjct: 65010 cgtgctat 65003



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 155   cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaa 213
             |||||| ||||||| ||||| |||||  ||| |||||||||||| ||||| || |||||
Sbjct: 64838 cagcaactgaagctagtgatggattcagttatctgggcatttaggcatactgaaagaaa 64780
to top
>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project)
          Length = 98101

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
             ||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| 
Sbjct: 58335 atgataactaagaactttgaagattatccagaacaccgcctcaagtttttctcattactc 58394

                     
Query: 107   cgtgctat 114
             ||||||||
Sbjct: 58395 cgtgctat 58402



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                         
Query: 155   cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
             |||||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| 
Sbjct: 58565 cagcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaat 58624

                                                                 
Query: 215   attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
             ||||| || ||||| |||| ||| ||| | || || ||||| || |||||||
Sbjct: 58625 attgctgaaaccgggcttaatcttttgcttgagatgctgaaaaactttcagg 58676
to top
>emb|Y18470.1|ATHY18470 Arabidopsis thaliana xpo1 gene
          Length = 8144

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                        
Query: 47   atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
            ||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||| 
Sbjct: 6890 atgataactaagaactttgaagattatccagaacaccgcctcaagtttttctcattactc 6949

                    
Query: 107  cgtgctat 114
            ||||||||
Sbjct: 6950 cgtgctat 6957



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 94/112 (83%)
 Strand = Plus / Plus

                                                                        
Query: 155  cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
            |||||| ||||||| ||||| ||||| |||| |||||||||||||||||| |||||||| 
Sbjct: 7120 cagcaactgaagctagtgatggattcaattatctgggcatttagacatactgagagaaat 7179

                                                                
Query: 215  attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
            ||||| || ||||| |||| ||| ||| | || || ||||| || |||||||
Sbjct: 7180 attgctgaaaccgggcttaatcttttgcttgagatgctgaaaaactttcagg 7231
to top
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence
          Length = 124550

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctct 100
             |||||||| ||||||||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 53072 atgattacaaaaaactttgaagattaccctgagcaccggcttaagttcttctct 53019



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 90/112 (80%)
 Strand = Plus / Minus

                                                                         
Query: 155   cagcaattgaagcttgtgattgattcgattaactgggcatttagacatacagagagaaac 214
             ||||||||||||||||| || ||||| || |  ||||||||| | || ||||| || || 
Sbjct: 52855 cagcaattgaagcttgttatggattcaatcatgtgggcatttcggcacacagaaaggaat 52796

                                                                 
Query: 215   attgccgagaccggccttagtctattgttggaaattctgaagaattttcagg 266
             ||||| || || ||||| |  || |||||||| || |||||||| |||||||
Sbjct: 52795 attgctgaaacaggcctgaacctgttgttggagatgctgaagaagtttcagg 52744
to top
>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592,
             complete sequence
          Length = 96561

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                         
Query: 296   acatattttttgaatatagagcaggagatttttgcagttctcacagattcatttcataaa 355
             |||||||||||||  |||||||| ||||| ||||| ||  | || ||  | |||||||| 
Sbjct: 74917 acatattttttgacaatagagcaagagatatttgctgtcttgacggacacttttcataag 74976

                                                         
Query: 356   cctggattcaaacttcatgttttggtgcttcaacacttgttttg 399
             ||||| |||||| | ||||| |||||||||||||| ||||||||
Sbjct: 74977 cctgggttcaaattacatgtcttggtgcttcaacatttgttttg 75020



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
             |||||||| ||||| || |||||||| || ||||| || || ||||| ||||||||||||
Sbjct: 74292 atgattaccaaaaatttcgaagattacccagagcatcggctaaagttcttctctttactt 74351

                     
Query: 107   cgtgctat 114
              |||||||
Sbjct: 74352 tgtgctat 74359
to top
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                         
Query: 296   acatattttttgaatatagagcaggagatttttgcagttctcacagattcatttcataaa 355
             |||||||||||||  |||||||| ||||| ||||| ||  | || ||  | |||||||| 
Sbjct: 35428 acatattttttgacaatagagcaagagatatttgctgtcttgacggacacttttcataag 35487

                                                         
Query: 356   cctggattcaaacttcatgttttggtgcttcaacacttgttttg 399
             ||||| |||||| | ||||| |||||||||||||| ||||||||
Sbjct: 35488 cctgggttcaaattacatgtcttggtgcttcaacatttgttttg 35531



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttactt 106
             |||||||| ||||| || |||||||| || ||||| || || ||||| ||||||||||||
Sbjct: 34803 atgattaccaaaaatttcgaagattacccagagcatcggctaaagttcttctctttactt 34862

                     
Query: 107   cgtgctat 114
              |||||||
Sbjct: 34863 tgtgctat 34870
to top
>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                         
Query: 299   tattttttgaatatagagcaggagatttttgcagttctcacagattcatttcataaacct 358
             ||||||||||  |||||||| ||||| ||||| ||  | |||||  | |||||||| |||
Sbjct: 44635 tattttttgacaatagagcaagagatatttgctgtcttgacagacacttttcataagcct 44576

                                             
Query: 359   ggattcaaacttcatgttttggtgcttcaaca 390
             || |||||| | ||||| ||||||||||||||
Sbjct: 44575 gggttcaaattgcatgtcttggtgcttcaaca 44544



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 47    atgattactaaaaactttgaagattatcctgagcaccgcctcaagtttttctctttact 105
             |||||||| ||||||||||||||||| || |||||  | || || ||||||||||||||
Sbjct: 45246 atgattacgaaaaactttgaagattacccagagcataggctaaaatttttctctttact 45188
to top
>emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chromosome 2, complete
             sequence
          Length = 167210

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 84    gcctcaagtttttctctttacttc 107
             ||||||||||||||||||||||||
Sbjct: 80592 gcctcaagtttttctctttacttc 80615
to top
>gb|AC132007.2| Homo sapiens 3 BAC CTD-2230D16 (Cal Tech Human BAC Library) complete
             sequence
          Length = 69700

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 256   gaattttcaggcttcagaattc 277
             ||||||||||||||||||||||
Sbjct: 13516 gaattttcaggcttcagaattc 13495
to top
>gb|BC040632.1| Homo sapiens, clone IMAGE:5759975, mRNA
          Length = 2069

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 256 gaattttcaggcttcagaattc 277
           ||||||||||||||||||||||
Sbjct: 758 gaattttcaggcttcagaattc 737
to top
>ref|XM_630041.1| Dictyostelium discoideum hypothetical protein (DDB0183812), partial
            mRNA
          Length = 3198

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 47   atgattactaaaaactttgaagattatcc 75
            ||||| || ||||||||||||||||||||
Sbjct: 2479 atgatcaccaaaaactttgaagattatcc 2507
to top
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    ctttccagccagcaattgaag 166
              |||||||||||||||||||||
Sbjct: 175894 ctttccagccagcaattgaag 175914
to top
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
             sequence
          Length = 134496

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   ggggcatcatttcctaacatg 517
             |||||||||||||||||||||
Sbjct: 86204 ggggcatcatttcctaacatg 86184
to top
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence
          Length = 216261

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    atttcataaacctggattca 365
              ||||||||||||||||||||
Sbjct: 215239 atttcataaacctggattca 215258
to top
>gb|AC009070.12| Homo sapiens chromosome 16 clone RP11-314O13, complete sequence
          Length = 203131

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aggctgttttccagtgtacc 40
             ||||||||||||||||||||
Sbjct: 16879 aggctgttttccagtgtacc 16860
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>ref|XM_799483.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase
            (Tc00.1047053504421.10) partial mRNA
          Length = 2820

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   agcaccgcctcaagtttttc 97
            ||||||||||||||||||||
Sbjct: 2564 agcaccgcctcaagtttttc 2545
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>ref|XM_802776.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase
            (Tc00.1047053506467.40) partial mRNA
          Length = 2820

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   agcaccgcctcaagtttttc 97
            ||||||||||||||||||||
Sbjct: 2564 agcaccgcctcaagtttttc 2545
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>gb|AC110034.8| Mus musculus chromosome 3, clone RP23-237L12, complete sequence
          Length = 188908

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   atttcataaacctggattca 365
             ||||||||||||||||||||
Sbjct: 50927 atttcataaacctggattca 50946
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>ref|XM_740805.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000030.01.0)
           partial mRNA
          Length = 573

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 tggaaattctgaagaatttt 262
           ||||||||||||||||||||
Sbjct: 57  tggaaattctgaagaatttt 76
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>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence
          Length = 135959

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 49/59 (83%)
 Strand = Plus / Plus

                                                                        
Query: 23    gctgttttccagtgtacccttganatgattactaaaaactttgaagattatcctgagca 81
             |||||||||  ||| || || || ||||||||  |||| |||||||||||||| |||||
Sbjct: 81949 gctgttttcatgtgcacgctagatatgattaccgaaaattttgaagattatccagagca 82007
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>gb|AC156607.5| Mus musculus chromosome 1, clone RP23-230A23, complete sequence
          Length = 182640

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    ggtatcatatccatctaatg 461
              ||||||||||||||||||||
Sbjct: 145216 ggtatcatatccatctaatg 145197
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>ref|XM_786159.1| PREDICTED: Strongylocentrotus purpuratus similar to H3 histone,
           family 3B (LOC586375), mRNA
          Length = 1116

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 tttagacatacagagagaaa 213
           ||||||||||||||||||||
Sbjct: 778 tttagacatacagagagaaa 759
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>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a
              novel gene and a CpG island, complete sequence
          Length = 214065

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    ttttcaggcttcagaattca 278
              ||||||||||||||||||||
Sbjct: 125206 ttttcaggcttcagaattca 125225
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>gb|AC104978.2| Homo sapiens chromosome 11, clone RP11-244O16, complete sequence
          Length = 154105

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   agaattttcaggcttcagaa 274
             ||||||||||||||||||||
Sbjct: 33521 agaattttcaggcttcagaa 33502
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>gb|AC023206.6| Homo sapiens chromosome 11, clone RP11-797J4, complete sequence
          Length = 208561

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   agaattttcaggcttcagaa 274
             ||||||||||||||||||||
Sbjct: 41207 agaattttcaggcttcagaa 41226
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>gb|AC099313.3| Homo sapiens chromosome 16 clone CTD-2055G21, complete sequence
          Length = 112222

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aggctgttttccagtgtacc 40
             ||||||||||||||||||||
Sbjct: 28103 aggctgttttccagtgtacc 28122
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   ttcatgttttggtgcttcaa 388
             ||||||||||||||||||||
Sbjct: 77008 ttcatgttttggtgcttcaa 77027
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>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
          Length = 83287

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    caccgcctcaagtttttctcttta 103
             |||||| |||||||||||||||||
Sbjct: 29302 caccgcatcaagtttttctcttta 29325
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>dbj|AB025620.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDE13
          Length = 14139

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 296  acatattttttgaatatagagcaggaga 323
            |||| |||||||||||||||| ||||||
Sbjct: 6569 acatcttttttgaatatagagaaggaga 6596
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>gb|AC155254.1| Mus musculus BAC clone RP24-174G4 from 16, complete sequence
          Length = 170860

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    gcctcaagtttttctcttta 103
             ||||||||||||||||||||
Sbjct: 74343 gcctcaagtttttctcttta 74362
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>gb|AC154200.1| Mus musculus BAC clone RP24-81G10 from 17, complete sequence
          Length = 216721

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tcacagattcatttcataaa 355
              ||||||||||||||||||||
Sbjct: 135206 tcacagattcatttcataaa 135187
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>dbj|AB216993.1| Equus caballus DNA, microsatellite TKY3050
          Length = 424

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 attttttgaatatagagcag 319
           ||||||||||||||||||||
Sbjct: 188 attttttgaatatagagcag 207


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,233,704
Number of Sequences: 3902068
Number of extensions: 5233704
Number of successful extensions: 106033
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105801
Number of HSP's gapped (non-prelim): 232
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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