ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| baaln12 | 593 | AV934047 | not_full | gb|AY110061.1| Zea mays CL537_1 mRNA sequence Length = 1098 | 33 | not_full | GPH_NEIMA (Q9JTP5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP) Length = 235 | 67 | -- | --- | - | -- | --- | - |
| baaln10 | 636 | AV934046 | not_full | ref|XM_472314.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 831 | 53 | not_full | MES4_DROME (Q8MT36) Probable histone methyltransferase Mes-4 (Maternal-effect sterile 4) Length = 1427 | 8 | -- | --- | - | -- | --- | - |
| baaln09 | 363 | AV934045 | not_full | ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 | 333 | not_full | CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor (LHCI type III CAB-8) Length = 273 | 95 | -- | --- | - | -- | --- | - |
| baaln06 | 541 | AV934044 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 112 | full | IF2A_SCHPO (P56286) Eukaryotic translation initiation factor 2 alpha subunit (eIF-2-alpha) Length = 306 | 51 | -- | --- | - | -- | --- | - |
| baaln03 | 535 | AV934043 | not_full | dbj|AK073928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073L20, full insert sequence Length = 1098 | 74 | not_full | YE99_SCHPO (O13771) Hypothetical protein C17A5.09c in chromosome I Length = 310 | 9 | -- | --- | - | -- | --- | - |
| baaln02 | 607 | AV934042 | not_full | ref|NM_184935.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1223 | 47 | not_full | C72A1_CATRO (Q05047) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) Length = 524 | 141 | -- | --- | - | -- | --- | - |
| baaln01 | 598 | AV934041 | full | emb|X99608.1|OSSMT3 O.sativa mRNA for SMT3 protein Length = 303 | 87 | full | SMT3_ORYSA (P55857) Ubiquitin-like protein SMT3 Length = 100 | 30 | -- | --- | - | -- | --- | - |
| baalm24 | 615 | AV934040 | not_full | gb|AY105920.1| Zea mays PCO073266 mRNA sequence Length = 1079 | 45 | not_full | AROK_ARATH (Q9SJ05) Probable shikimate kinase, chloroplast precursor (EC 2.7.1.71) Length = 292 | 22 | -- | --- | - | -- | --- | - |
| baalm23 | 575 | AV934039 | not_full | emb|AJ511346.1|HVU511346 Hordeum vulgare subsp. vulgare partial mRNA for metallothioneine type2 (mt2b gene) Length = 241 | 277 | not_full | MT21_ORYSA (P94029) Metallothionein-like protein type 2 Length = 82 | 30 | -- | --- | - | -- | --- | - |
| baalm22 | 583 | AV934038 | not_full | ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 | 360 | not_full | CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor (LHCI type III CAB-8) Length = 273 | 80 | -- | --- | - | -- | --- | - |
| baalm21 | 641 | AV934037 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 54 | not_full | B2L14_HUMAN (Q9BZR8) Apoptosis facilitator Bcl-2-like 14 protein (Apoptosis regulator Bcl-G) Length = 327 | 3 | -- | --- | - | -- | --- | - |
| baalm18 | 459 | AV934036 | not_full | ref|XM_467899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 | 32 | not_full | SYFB_BUCAP (P59057) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 798 | 5 | -- | --- | - | -- | --- | - |
| baalm17 | 498 | AV934035 | not_full | ref|XM_467899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 | 42 | not_full | EFG_AZOSE (Q5P335) Elongation factor G (EF-G) Length = 698 | 5 | -- | --- | - | -- | --- | - |
| baalm16 | 295 | AV934034 | not_full | gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 | 48 | not_full | RS12_HORVU (Q9XHS0) 40S ribosomal protein S12 Length = 143 | 77 | -- | --- | - | -- | --- | - |
| baalm15 | 573 | AV934033 | not_full | gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 | 79 | not_full | RS12_HORVU (Q9XHS0) 40S ribosomal protein S12 Length = 143 | 74 | -- | --- | - | -- | --- | - |
| baalm13 | 613 | AV934032 | not_full | emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 | 73 | not_full | RUBB_SECCE (Q43831) RuBisCO large subunit-binding protein subunit beta, chloroplast (60 kDa chaperonin subunit beta) (CPN-60 beta) (Fragment) Length = 499 | 404 | -- | --- | - | -- | --- | - |
| baalm12 | 463 | AV934031 | not_full | gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 | 431 | not_full | RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3 Length = 244 | 75 | -- | --- | - | -- | --- | - |
| baalm11 | 527 | AV934030 | not_full | gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 | 500 | not_full | RL72_ARATH (P60039) 60S ribosomal protein L7-2 Length = 242 | 68 | -- | --- | - | -- | --- | - |
| baalm10 | 563 | AV934029 | not_full | ref|XM_493854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2925 | 59 | not_full | PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73 (Pseudo-response regulator 73) (OsPRR73) Length = 767 | 15 | -- | --- | - | -- | --- | - |
| baalm07 | 592 | AV934028 | not_full | ref|XM_493844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1006 | 144 | not_full | IN21_MAIZE (P49248) IN2-1 protein Length = 243 | 62 | -- | --- | - | -- | --- | - |
| baalm06 | 628 | AV934027 | not_full | dbj|AK109362.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-E06, full insert sequence Length = 1353 | 32 | not_full | UMP1_ARATH (Q9LKA5) Unknown mitochondrial protein At3g15000 Length = 395 | 29 | -- | --- | - | -- | --- | - |
| baalm03 | 588 | AV934026 | not_full | ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 | 48 | not_full | DHGY_CUCSA (P13443) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent hydroxypyruvate reductase) (HPR) (GDH) Length = 382 | 74 | -- | --- | - | -- | --- | - |
| baalm02 | 558 | AV934025 | not_full | ref|NM_187534.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 | 294 | not_full | NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2) (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP) Length = 268 | 26 | -- | --- | - | -- | --- | - |
| baalm01 | 312 | AV934024 | not_full | ref|XM_464736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 822 | 18 | not_full | PM47A_CANBO (P21245) Peroxisomal membrane protein PMP47A Length = 423 | 50 | -- | --- | - | -- | --- | - |
| baall23 | 332 | AV934023 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 33 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 23 | -- | --- | - | -- | --- | - |
| baall22 | 546 | AV934022 | not_full | emb|X66728.1|HVSUCSYN H.vulgare mRNA for sucrose synthase (partial) Length = 2012 | 176 | not_full | SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 1) Length = 807 | 35 | -- | --- | - | -- | --- | - |
| baall20 | 605 | AV934021 | not_full | gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30868 unknown mRNA Length = 1503 | 49 | not_full | FP1_MYTED (Q25460) Adhesive plaque matrix protein (Polyphenolic adhesive protein) (Foot protein 1) (MEFP1) (Fragment) Length = 875 | 18 | -- | --- | - | -- | --- | - |
| baall19 | 620 | AV934020 | not_full | dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 | 500 | not_full | TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA protein 1) Length = 124 | 5 | -- | --- | - | -- | --- | - |
| baall18 | 551 | AV934019 | not_full | gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 | 144 | not_full | ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC 4.1.2.13) (ALDP) Length = 388 | 71 | -- | --- | - | -- | --- | - |
| baall15 | 194 | AV934018 | not_full | gb|AF498268.1| Haynaldia villosa clone kong28 mRNA Length = 1474 | 158 | not_full | T3RE_SALTY (P40815) Type III restriction-modification system StyLTI enzyme res (EC 3.1.21.5) Length = 990 | 1 | -- | --- | - | -- | --- | - |
| baall14 | 630 | AV934017 | not_full | ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1435 | 111 | not_full | FER_HUMAN (P16591) Proto-oncogene tyrosine-protein kinase FER (EC 2.7.10.2) (p94-FER) (c-FER) Length = 822 | 5 | -- | --- | - | -- | --- | - |
| baall12 | 619 | AV934016 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 44 | not_full | GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC 1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain alpha-hydroxy acid oxidase 1) Length = 367 | 12 | -- | --- | - | -- | --- | - |
| baall10 | 588 | AV934015 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 112 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 33 | -- | --- | - | -- | --- | - |
| baall09 | 587 | AV934014 | not_full | gb|AF287276.1|AF287276 Hordeum vulgare chlorophyll a/b-binding protein precursor (Lhca4) mRNA, partial cds; nuclear gene for chloroplast product Length = 687 | 106 | not_full | CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor (LHCI type III CAB-4) (LHCP) Length = 251 | 118 | -- | --- | - | -- | --- | - |
| baall07 | 644 | AV934013 | not_full | dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full insert sequence Length = 1609 | 67 | not_full | Y873_METJA (Q58283) Hypothetical ABC transporter ATP-binding protein MJ0873 Length = 290 | 4 | -- | --- | - | -- | --- | - |
| baall06 | 631 | AV934012 | not_full | gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full insert mRNA sequence Length = 2114 | 54 | full | ADF3_MAIZE (Q41764) Actin-depolymerizing factor 3 (ADF 3) (ZmABP3) (ZmADF3) Length = 139 | 114 | -- | --- | - | -- | --- | - |
| baall03 | 617 | AV934011 | not_full | ref|XM_474191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 | 50 | not_full | PEX3_PICAN (Q01497) Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal membrane protein PER9) Length = 457 | 2 | -- | --- | - | -- | --- | - |
| baall02 | 641 | AV934010 | not_full | dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full insert sequence Length = 1609 | 67 | not_full | Y873_METJA (Q58283) Hypothetical ABC transporter ATP-binding protein MJ0873 Length = 290 | 4 | -- | --- | - | -- | --- | - |
| baalk22 | 401 | AV934009 | not_full | gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 | 28 | not_full | SUFS_WIGBR (Q8D2J7) Cysteine desulfurase (EC 2.8.1.7) (Selenocysteine lyase) (EC 4.4.1.16) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) Length = 410 | 3 | -- | --- | - | -- | --- | - |
| baalk19 | 646 | AV934008 | not_full | dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 | 48 | full | MNTC_BACHD (Q9KD29) Manganese transport system membrane protein mntC Length = 292 | 8 | -- | --- | - | -- | --- | - |
| baalk18 | 621 | AV934007 | not_full | dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mRNA for BRI1-KD interacting protein 103, complete cds Length = 2366 | 35 | not_full | RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70 kDa) (snRNP70) Length = 448 | 2 | -- | --- | - | -- | --- | - |
| baalk17 | 591 | AV934006 | not_full | ref|XM_470787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1481 | 81 | not_full | NICE1_HUMAN (Q9UGL9) Protein NICE-1 Length = 99 | 1 | -- | --- | - | -- | --- | - |
| baalk15 | 602 | AV934005 | full | gb|AY639740.1| Hordeum vulgare subsp. spontaneum cultivar PI 420914 FtsH-like protein gene, partial cds Length = 458 | 500 | not_full | FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-) Length = 631 | 500 | -- | --- | - | -- | --- | - |
| baalk14 | 508 | AV934004 | not_full | gb|AC116856.8| Mus musculus chromosome 14, clone RP24-403P16, complete sequence Length = 196560 | 24 | not_full | VIRAL_AGRTU (P07167) Limited host range virA protein (EC 2.7.13.3) (LHR virA) Length = 835 | 5 | -- | --- | - | -- | --- | - |
| baalk11 | 595 | AV934003 | not_full | dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 | 31 | not_full | TRXB_NEUCR (P51978) Thioredoxin reductase (EC 1.8.1.9) Length = 334 | 83 | -- | --- | - | -- | --- | - |
| baalk10 | 650 | AV934002 | not_full | gb|L48286.1|BLYSRP543R Hordeum vulgare Srp54-2 mRNA, complete sequence; and signal recognition particle 54 kDa subunit (Srp 54-3) mRNA, complete cds Length = 1707 | 104 | not_full | SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54) Length = 493 | 107 | -- | --- | - | -- | --- | - |
| baalk09 | 497 | AV934001 | not_full | gb|AF230786.1|AF230786 Hordeum vulgare human tumor protein-like protein mRNA, complete cds Length = 778 | 109 | not_full | TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP) (HTP) Length = 168 | 58 | -- | --- | - | -- | --- | - |
| baalk08 | 641 | AV934000 | not_full | gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 | 140 | not_full | SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein) Length = 115 | 46 | -- | --- | - | -- | --- | - |
| baalk07 | 589 | AV933999 | not_full | gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 | 142 | not_full | SUI1_ORYSA (P33278) Protein translation factor SUI1 homolog (GOS2 protein) Length = 115 | 48 | -- | --- | - | -- | --- | - |
| baalk06 | 669 | AV933998 | not_full | gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 | 223 | not_full | PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump) Length = 951 | 54 | -- | --- | - | -- | --- | - |
