ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalm01 |
|---|---|
| Clone Library Name | barley_pub |
>PM47A_CANBO (P21245) Peroxisomal membrane protein PMP47A| Length = 423 Score = 37.0 bits (84), Expect = 0.013 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +3 Query: 3 YYHFYQL----LXNKVEDVAAARGKKGLGDGTVGMFSWLVIAAVAGSINVLLTIPIWVLV 170 YY+FY+L L + A+ KK + ++ + AVAG+I+ + T PIWV Sbjct: 110 YYYFYELTGKTLNRRSNPQTASNSKKVALKKGLSVWQSMAAGAVAGTISRVATNPIWVAN 169 Query: 171 TRMQTHTQAERKV 209 TRM ++ + K+ Sbjct: 170 TRMTILSKNQGKL 182
>PM34_MOUSE (O70579) Peroxisomal membrane protein PMP34 (34 kDa peroxisomal| membrane protein) (Solute carrier family 25 member 17) Length = 307 Score = 35.8 bits (81), Expect = 0.028 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +3 Query: 105 LVIAAVAGSINVLLTIPIWVLVTRMQ 182 LV+ VAG +NVLLT P+WV+ TR++ Sbjct: 105 LVVGFVAGVVNVLLTTPLWVVNTRLK 130
>PM34_HUMAN (O43808) Peroxisomal membrane protein PMP34 (34 kDa peroxisomal| membrane protein) (Solute carrier family 25 member 17) Length = 307 Score = 35.8 bits (81), Expect = 0.028 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +3 Query: 105 LVIAAVAGSINVLLTIPIWVLVTRMQ 182 LV+ VAG +NVLLT P+WV+ TR++ Sbjct: 105 LVVGFVAGVVNVLLTTPLWVVNTRLK 130
>PM47B_CANBO (Q00319) Peroxisomal membrane protein PMP47B| Length = 419 Score = 35.0 bits (79), Expect = 0.048 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Frame = +3 Query: 3 YYHFYQLLXNKVEDVAAARGKKGLGDGTV--GMFSWLVIAA--VAGSINVLLTIPIWVLV 170 YY+FY+L + + + G T+ G+ W +AA VAG+I+ + T PIWV Sbjct: 110 YYYFYELTGKTLSRRSNPQTTSGSKKVTLKKGLSVWQSMAAGAVAGTISRVATNPIWVAN 169 Query: 171 TRMQTHTQAERKV 209 TRM ++ + K+ Sbjct: 170 TRMTILSKNQGKL 182
>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 34.7 bits (78), Expect = 0.062 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 GGRC EKG HCW + C VN CS+Y N G+C Sbjct: 4224 GGRC--ILNEKGDLRCHCWPSYSGGRCE---VNHCSNYCQNGGTC 4263
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 34.3 bits (77), Expect = 0.081 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 GGRC EKG HCW + C VN CS+Y N G+C Sbjct: 4224 GGRC--ILNEKGDLRCHCWPSYSGERCE---VNHCSNYCQNGGTC 4263
>KRA51_HUMAN (Q6L8H4) Keratin-associated protein 5-1 (Keratin-associated protein| 5.1) (Ultrahigh sulfur keratin-associated protein 5.1) Length = 278 Score = 34.3 bits (77), Expect = 0.081 Identities = 22/83 (26%), Positives = 29/83 (34%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSCHTYADTYAGRKEGDR 214 G CG C G G C C CC V CS + G C + + G Sbjct: 25 GSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGG 84 Query: 215 VQEGAFA*GNTQGQFNGCSYS*G 283 + G + G ++G C S G Sbjct: 85 CKGGCGSCGGSKGGCGSCGGSKG 107 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWHCWDVFLAC--YCSCCWVNQCSSYNSNMGSC 169 G CGSC KG G C C CC + C S + G C Sbjct: 185 GGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGC 230 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 7/51 (13%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWHCWDVFLACYCS-------CCWVNQCSSYNSNMGSC 169 G CGSC KG G C +C CC V CS + G C Sbjct: 107 GGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGC 157 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +2 Query: 44 CGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSS 145 CGSC+ KG G C CSCC CSS Sbjct: 220 CGSCAGSKGGCGSSC------SQCSCCKPCCCSS 247
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 33.5 bits (75), Expect = 0.14 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG CS G G C+ C C WV CS ++ GSC Sbjct: 39 GSGCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSC--TSCGSC 81
>NXF2_HUMAN (Q9GZY0) Nuclear RNA export factor 2 (TAP-like protein 2) (TAPL-2)| Length = 626 Score = 33.5 bits (75), Expect = 0.14 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +2 Query: 119 CCWVNQCSSYNSNMGSCHTYADTYAGRKEG 208 C + +C +Y + + CH + T+ GRK+G Sbjct: 2 CSTLKKCGTYRTEVAECHDHGSTFQGRKKG 31
>DNAA_BACFR (Q64PL4) Chromosomal replication initiator protein dnaA| Length = 476 Score = 31.2 bits (69), Expect = 0.69 Identities = 23/88 (26%), Positives = 39/88 (44%) Frame = +3 Query: 12 FYQLLXNKVEDVAAARGKKGLGDGTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTHT 191 FY+ L +K D+ K +GDGT M++ LV + ++N T TR Sbjct: 52 FYEFLEDKFVDLLRKTLYKVIGDGTKLMYNVLVDKSSGATVNQEST-------TRSTAIP 104 Query: 192 QAERKVIESKRELLLKEIPRVNSMDAHI 275 Q+ ++ ++ L P V +D H+ Sbjct: 105 QSGLPRVDERKAPGLLRAPAVQDLDPHL 132
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 30.8 bits (68), Expect = 0.90 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 2/85 (2%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSCHTYADTY--AGRKEG 208 G CG C G G C C CC V CS S+ GSC Y G +G Sbjct: 32 GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC--SSCGSCGGSKGGYGSCGGSKG 89 Query: 209 DRVQEGAFA*GNTQGQFNGCSYS*G 283 G + G ++G C S G Sbjct: 90 -----GCVSCGGSKGGCGSCGGSKG 109
>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein| 5.8) (Ultrahigh sulfur keratin-associated protein 5.8) (Keratin, ultra high-sulfur matrix protein B) (UHS keratin B) (UHS KerB) Length = 187 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CGSC KG G C +CY CC + C S C Sbjct: 68 GDCGSCGGSKGGCG-SCGCSQCSCYKPCCCSSGCGSSCCQSSCC 110 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/45 (37%), Positives = 18/45 (40%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG C G G C C CC V CS S+ GSC Sbjct: 11 GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC--SSCGSC 53
>HEMN_AQUAE (O67886) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 456 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -2 Query: 236 KQKLPLGLY-HLPFCLRMCLHTCDKNPYWNCKKNID*P 126 ++K PL LY H+PFC + CL+ C N + +K I+ P Sbjct: 47 ERKTPLSLYFHIPFCEQRCLY-CGCNVIISHRKGIEEP 83
>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein| 5.7) (Ultrahigh sulfur keratin-associated protein 5.7) (Keratin-associated protein 5-3) (Keratin-associated protein 5.3) Length = 165 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CGSC KG G C +CY CC + C S C Sbjct: 75 GGCGSCGGSKGGCG-SCGCSQCSCYKPCCCSSGCGSSCCQSSCC 117 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/45 (37%), Positives = 18/45 (40%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG C G G C C CC V CS S+ GSC Sbjct: 18 GSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSC--SSCGSC 60
>TR95_HUMAN (Q9Y2X0) Thyroid hormone receptor-associated protein complex 95 kDa| component (Trap95) (Thyroid hormone receptor-associated protein 5) (Vitamin D3 receptor-interacting protein complex component DRIP92) Length = 877 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 53 CSWEKGPRGWHCWDVFLACYCSC 121 C WEK + HC V LAC SC Sbjct: 19 CEWEKWSKSTHCPSVPLACAWSC 41
>YYBO_BACSU (P37489) Hypothetical transport protein yybO| Length = 435 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = +3 Query: 87 VGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTH---TQAERKVIESKRELLLKEIP 248 V F W V G INVL TI W + + H +++E I+ + ++IP Sbjct: 170 VTTFDWRVAFLTIGCINVLFTIFFWQYYEQPERHKRISKSELNYIQKHNAITTEQIP 226
>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein| 5.3) (Ultrahigh sulfur keratin-associated protein 5.3) (Keratin-associated protein 5-9) (Keratin-associated protein 5.9) (UHS KerB-like) Length = 238 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/45 (37%), Positives = 18/45 (40%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG C G G C C CC V CS S+ GSC Sbjct: 18 GSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSC--SSCGSC 60
>MFTC_MACFA (Q95J75) Mitochondrial folate transporter/carrier (Solute carrier| family 25 member 32) Length = 315 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 102 WLVIAAVAGSINVLLTIPIWVLVTRMQTHTQA 197 +LV AA AG++ + +T P+WV TR+ A Sbjct: 123 YLVSAAEAGAMTLCITNPLWVTKTRLMLQYDA 154
>MFTC_HUMAN (Q9H2D1) Mitochondrial folate transporter/carrier (Solute carrier| family 25 member 32) Length = 315 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 102 WLVIAAVAGSINVLLTIPIWVLVTRMQTHTQA 197 +LV AA AG++ + +T P+WV TR+ A Sbjct: 123 YLVSAAEAGAMTLCITNPLWVTKTRLMLQYDA 154
>KS6C1_HUMAN (Q96S38) Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa| ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein) Length = 1066 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 99 KTSQQCHPLGPFSHEQLPHLPPCXSEAGRS 10 KT +CHP G +H L ++P C SE RS Sbjct: 998 KTLVECHPAGINTHTTL-NMPECVSEEARS 1026
>CMC2_MACFA (Q8HXW2) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 674 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = +3 Query: 48 AAARGKKGLGDGTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTHTQAERK----VIE 215 A AR DG V S L+ A+AG L P V+ TR+Q +A + VI+ Sbjct: 505 AHARASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVID 564 Query: 216 SKRELLLKEIPR 251 +++L +E P+ Sbjct: 565 CFKKILREEGPK 576
>GTHB1_ICTPU (Q9DG81) Gonadotropin beta-1 subunit precursor (Gonadotropin beta-I| chain) (GTH-I-beta) (GTH beta-1) Length = 132 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +2 Query: 89 WDVFLACYCSCC--WVNQCSSYNSNMGSCHTYA 181 + V L+C CS C + C +++ SCHT+A Sbjct: 98 YPVALSCECSQCNTEITDCGAFSMQPSSCHTHA 130
>CMC2_HUMAN (Q9UJS0) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 675 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +3 Query: 78 DGTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTHTQAERK----VIESKRELLLKEI 245 DG V S L+ A+AG L P V+ TR+Q +A + VI+ R++L +E Sbjct: 515 DGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVIDCFRKILREEG 574 Query: 246 PR 251 P+ Sbjct: 575 PK 576
>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)| Length = 182 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 10/63 (15%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWH-------CWDVFL---ACYCSCCWVNQCSSYNSNMGSCHTYADT 187 G CGSC KG G C V AC CS C C S + G C + + Sbjct: 64 GGCGSCGGSKGGCGSCGGCGSSCCKPVCCCVPACSCSSCGKGGCGSCGGSKGGCGSCGGS 123 Query: 188 YAG 196 G Sbjct: 124 KGG 126 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/45 (31%), Positives = 15/45 (33%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG C G C C CC V CS + G C Sbjct: 11 GSSCGGCGSRCGGCSSSCCVPVCCCKPVCCCVPACSCSSCGKGGC 55
>MFTC_MOUSE (Q8BMG8) Mitochondrial folate transporter/carrier (Solute carrier| family 25 member 32) Length = 316 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = +3 Query: 102 WLVIAAVAGSINVLLTIPIWVLVTRM 179 +LV AA AG++ + +T P+WV TR+ Sbjct: 123 YLVSAAEAGAMTLCITNPLWVTKTRL 148
>KS6C1_MOUSE (Q8BLK9) Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa| ribosomal protein S6 kinase) Length = 1056 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 99 KTSQQCHPLGPFSHEQLPHLPPCXSEAGRS 10 KT +CHP G +H L ++P C SE RS Sbjct: 988 KTLVECHPAGINTHTTL-NMPGCVSEEARS 1016
>SWF1_SCHPO (O60069) Palmitoyltransferase swf1 (EC 2.3.1.-)| Length = 356 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 6/44 (13%) Frame = +2 Query: 41 RCGSCSWEKGPRGWHCWDVFLACYC------SCCWVNQCSSYNS 154 +C +C +EK R HC L C C W+N C N+ Sbjct: 159 KCSTCKFEKPARSKHCR---LCNICVEKFDHHCIWINNCVGLNN 199
>FUS_MPV15 (P35949) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 537 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +2 Query: 101 LACYCSCCWVNQCSSYNSNMGSCHTYAD--TYAGRKEGDRVQEG 226 + C SC N C+ N++ G T D Y K DRVQ G Sbjct: 373 MGCLVSCYGHNSCTVINNDKGIIRTLPDGCHYISNKGVDRVQVG 416
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSC 169 G CG C G G C C CC V CS ++ GSC Sbjct: 11 GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC--TSCGSC 53
>YEA6_YEAST (P39953) Putative mitochondrial carrier YEL006W| Length = 335 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 114 AAVAGSINVLLTIPIWVLVTRMQTHT 191 A AG+I+ + T PIWV+ TR+ T Sbjct: 145 AITAGAISTVATNPIWVVKTRLMLQT 170
>SWF1_CANAL (Q5A861) Palmitoyltransferase SWF1 (EC 2.3.1.-)| Length = 353 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 3/41 (7%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCW---DVFLACYCSCCWVNQCSSY 148 G C +C K R HC FL C W+N C Y Sbjct: 146 GKTCSTCHIAKPARSKHCSVCNQCFLLYDHHCVWINNCVGY 186
>CR026_HUMAN (Q8N1N2) Protein C18orf26| Length = 210 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 11/54 (20%) Frame = +2 Query: 32 QGGRCGSCSWEKGPRGWHCWDVFLACYCSC-----------CWVNQCSSYNSNM 160 Q C + E W W VFLAC +C C VN S NS++ Sbjct: 93 QSESCNTQVKEYCRNDWSMWKVFLACLLACVIMTAIGVLIICLVNNKGSANSSI 146
>HEMN_MYCTU (P71756) Probable oxygen-independent coproporphyrinogen III oxidase| (EC 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 375 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -2 Query: 224 PLGLY-HLPFCLRMCLHTCDKNPY 156 P G+Y H+PFCL C + CD N Y Sbjct: 5 PFGVYLHVPFCLTRCGY-CDFNTY 27
>LYM1_ARATH (Q93ZH0) LysM domain GPI-anchored protein 1 precursor| Length = 416 Score = 28.1 bits (61), Expect = 5.8 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = +2 Query: 38 GRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSCHTYADTYAG 196 G C CS G R +C LA CS QC + N +G+ T T AG Sbjct: 249 GHCVQCSCALGSRNLYCEPASLAVSCSSM---QCRNSNLMLGNI-TVQQTSAG 297
>ENV_SIVGB (P22380) Envelope polyprotein GP160 precursor [Contains: GP120;| GP32; Putative protein ENV-EXTN] Length = 821 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +3 Query: 63 KKGLGDGTVGMFSWLVIAAVA-GSINVLLTIPIWVLVTRMQTHTQAERKVIESKRELLLK 239 K+ G +G+ L +A A GS++V LT+ LVT + + K+IE + ELL Sbjct: 566 KEKRGAVILGILGLLSLAGSAMGSVSVALTVQSQSLVTGIVEQQKQLLKLIEQQSELLKL 625 Query: 240 EIPRVNSMDAHI 275 I V ++ + Sbjct: 626 TIWGVKNLQTRL 637
>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein| 5.5) (Ultrahigh sulfur keratin-associated protein 5.5) (Keratin-associated protein 5-11) (Keratin-associated protein 5.11) Length = 221 Score = 28.1 bits (61), Expect = 5.8 Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Frame = +2 Query: 35 GGRCGSCSWEKGPRGWHCWDVFLACYCSCCWVNQCSSYNSNMGSCHTYADTYAGRKEG-- 208 G CG C G G C C CC V CS + G C + G K G Sbjct: 53 GSGCGGC----GGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGC----GSCGGSKRGCV 104 Query: 209 -DRVQEGAFA*GNTQGQFNGC 268 V +GA G+ G GC Sbjct: 105 SCGVSKGAC--GSCGGSKGGC 123
>ADMR_RAT (P31392) Adrenomedullin receptor (AM-R) (G10D) (NOW)| Length = 395 Score = 28.1 bits (61), Expect = 5.8 Identities = 8/34 (23%), Positives = 20/34 (58%) Frame = +3 Query: 81 GTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQ 182 G VGM + ++ + ++L++P+W+L ++ Sbjct: 79 GRVGMLNLYILNMAVADLGIILSLPVWMLEVMLE 112
>IFT52_HUMAN (Q9Y366) Intraflagellar transport 52 homolog (Protein NGD5 homolog)| Length = 437 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = +2 Query: 158 MGSCHTYADTYAGRKEGDRVQEGAF 232 +GSCH ++D Y ++E ++ + F Sbjct: 213 LGSCHMFSDQYLDKEENSKIMDVVF 237
>MATK_CHAFS (Q5YJU7) Maturase K (Intron maturase)| Length = 499 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = -2 Query: 170 DKNPYWNCKKNI 135 +KNP+W CKKN+ Sbjct: 78 NKNPFWGCKKNL 89
>IFT52_MOUSE (Q62559) Intraflagellar transport 52 homolog (Protein NGD5)| Length = 426 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = +2 Query: 158 MGSCHTYADTYAGRKEGDRVQEGAF 232 +GSCH ++D Y ++E ++ + F Sbjct: 214 LGSCHMFSDQYLDKEENSKIMDVVF 238
>ADMR_MOUSE (P43142) Adrenomedullin receptor (AM-R) (G10D) (NOW)| Length = 395 Score = 27.7 bits (60), Expect = 7.6 Identities = 8/34 (23%), Positives = 20/34 (58%) Frame = +3 Query: 81 GTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQ 182 G VGM + ++ + ++L++P+W+L ++ Sbjct: 79 GRVGMLNLYILNMAIADLGIILSLPVWMLEVMLE 112
>HEMN_BACSU (P54304) Oxygen-independent coproporphyrinogen III oxidase 1 (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 366 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 209 HLPFCLRMCLHTCDKNPYWNCKKNID 132 H+PFC +C H CD N Y+ + +D Sbjct: 7 HIPFCEHIC-HYCDFNKYFIQSQPVD 31
>DIHR_ACHDO (Q16983) Diuretic hormone receptor precursor (DH-R)| Length = 441 Score = 27.3 bits (59), Expect = 10.0 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Frame = +3 Query: 96 FSWL----VIAAVAGSINVLLTIPIWVLVTRMQTHTQAERKVIESKRELLLKEIP 248 F W+ VI +A ++ L +I +WVL+T++Q+ AE + + LL P Sbjct: 292 FDWIHQAPVITVLAVNLVFLFSI-MWVLITKLQSANTAETQQYRKATKALLVLFP 345
>ZDHC4_HUMAN (Q9NPG8) Probable palmitoyltransferase ZDHHC4 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 4) (DHHC-4) (Zinc finger protein 374) Length = 344 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 4/37 (10%) Frame = +2 Query: 41 RCGSCSWEKGPRGWHC----WDVFLACYCSCCWVNQC 139 RC +C K R HC W V + C WVN C Sbjct: 150 RCSTCDLRKPARSKHCSVCNWCVHRFDH-HCVWVNNC 185
>HEMN_HELPY (O25376) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 457 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%) Frame = -2 Query: 239 LKQKLPLGLY-HLPFCLRMC 183 LK +PL LY HLPFC C Sbjct: 47 LKNPMPLSLYTHLPFCRSAC 66
>HEMN_HELPJ (Q9ZLH0) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 457 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%) Frame = -2 Query: 239 LKQKLPLGLY-HLPFCLRMC 183 LK +PL LY HLPFC C Sbjct: 47 LKNPMPLSLYTHLPFCRSAC 66
>SYF1_USTMA (Q4P7S1) Pre-mRNA-splicing factor SYF1| Length = 1081 Score = 27.3 bits (59), Expect = 10.0 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +3 Query: 12 FYQLLXNKVEDVAAARGKKGLGDGTVGMFSWLVIAAV-AGSINVLLTIP-IWVLVTRMQT 185 F L + VED +G DGTVG W +AA+ ++ L T+P +W+ M Sbjct: 176 FGPTLIDSVEDEDFGSAYRGGLDGTVGWQEWKSLAALYERALMWLPTMPRLWLSYLSMFI 235 Query: 186 HTQ 194 H Q Sbjct: 236 HPQ 238
>GHC1_HUMAN (Q9H936) Mitochondrial glutamate carrier 1 (GC-1) (Glutamate/H(+)| symporter 1) (Solute carrier family 25 member 22) Length = 323 Score = 27.3 bits (59), Expect = 10.0 Identities = 16/58 (27%), Positives = 28/58 (48%) Frame = +3 Query: 72 LGDGTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTHTQAERKVIESKRELLLKEI 245 + D + + + L+ +AG I V PI + TR+Q +R V S + L+K + Sbjct: 1 MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQR-VYTSMSDCLIKTV 57
>CMC2_MOUSE (Q9QXX4) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 676 Score = 27.3 bits (59), Expect = 10.0 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +3 Query: 78 DGTVGMFSWLVIAAVAGSINVLLTIPIWVLVTRMQTHTQAERK----VIESKRELLLKEI 245 DG V S L+ A+AG L P V+ TR+Q +A + V + R++L +E Sbjct: 516 DGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYNGVTDCFRKILREEG 575 Query: 246 PR 251 P+ Sbjct: 576 PK 577
>KCNAS_DROME (P08510) Potassium voltage-gated channel protein Shaker| Length = 655 Score = 27.3 bits (59), Expect = 10.0 Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Frame = +3 Query: 69 GLGDGT-VGMFSWLV--IAAVAGSINVLLTIPIWVLVTRMQTHTQAERKVIESKRELLLK 239 G GD T VG++ +V + A+AG + + L +P+ V H + +++ ++S+ + Sbjct: 444 GYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVT 503 Query: 240 EIPRV-NSMDAHILKDRLAKLDSE 308 P + ++ H+ K L++ S+ Sbjct: 504 SCPYLPGTLGQHMKKSSLSESSSD 527 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,572,283 Number of Sequences: 219361 Number of extensions: 795970 Number of successful extensions: 2904 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2875 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
