ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalm21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2L14_HUMAN (Q9BZR8) Apoptosis facilitator Bcl-2-like 14 protein... 32 1.6
2VGAM_HAEIN (O05070) Mu-like prophage FluMu host-nuclease inhibit... 31 3.5
3FADB_PSEU2 (Q4ZRA0) Fatty oxidation complex alpha subunit [Inclu... 30 7.9

>B2L14_HUMAN (Q9BZR8) Apoptosis facilitator Bcl-2-like 14 protein (Apoptosis|
           regulator Bcl-G)
          Length = 327

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
 Frame = +1

Query: 370 LKGDALNKAVRETANEAIAAIFSTEDPKA----------VVVTEGLGKRIQGFGNTNYEP 519
           L+ +A++  V   AN     ++S   P+A          + VTEGL  ++QG        
Sbjct: 141 LEHEAVDPKVISIANRVAEIVYSWPPPQATQAGGFKSKEIFVTEGLSFQLQGHVPVASSS 200

Query: 520 SRDDKKSFLSELSEVVGIGGASIKQGL 600
            +D+++  L+++ E++   G  +++ L
Sbjct: 201 KKDEEEQILAKIVELLKYSGDQLERKL 227



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>VGAM_HAEIN (O05070) Mu-like prophage FluMu host-nuclease inhibitor protein gam|
          Length = 169

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
 Frame = +1

Query: 295 DFKREMQRHSAAMRQLV-----HYKGHPDPLKGDA--LNKAVRE---------------- 405
           D  RE  R +  M   +     HY      LK +   L KAV+E                
Sbjct: 28  DLSREHTRLATEMNDKIGATSEHYAPKLKALKEEIEPLQKAVQEYCEANRDELTEFGKTK 87

Query: 406 TANEAIAAIFSTEDPKAVVV--TEGLGKRIQGFGNTNYEPSRDD--KKSFLSELSEVVGI 573
           TAN     +   + P +V +   E + + +Q  G   +  +R +  K++ L+E     GI
Sbjct: 88  TANFVTGEVQWRQRPPSVAIRGAEAVMEFLQRMGFDRFIRTRQEINKEALLNEPEVAKGI 147

Query: 574 GGASIKQGLSNF 609
            G +IKQGL +F
Sbjct: 148 AGVTIKQGLEDF 159



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>FADB_PSEU2 (Q4ZRA0) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 721

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +1

Query: 370 LKGDALNKAVRETANE---AIAAIFSTEDPKAVVVTEGLGKRIQGFGNTNY 513
           LKG+++NK  R T NE   A+ A+ +    K V+VT G    I G   T +
Sbjct: 24  LKGESVNKFNRLTLNEFRQAVDAVKADASVKGVIVTSGKDSFIVGADITEF 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.131    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,107,661
Number of Sequences: 219361
Number of extensions: 1125377
Number of successful extensions: 2572
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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