ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalk15 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 334 bits (857), Expect = 1e-91 Identities = 166/200 (83%), Positives = 181/200 (90%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA+FQME TGVTF+DVAGVDEAK++F EVV FLKKPERFTAVGA+IP Sbjct: 147 GGPGQAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIP 206 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+P Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSP 266 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LD+ Sbjct: 267 CIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDA 326 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV+VDVPDV+ Sbjct: 327 ALLRPGRFDRQVTVDVPDVK 346
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 329 bits (844), Expect = 3e-90 Identities = 166/200 (83%), Positives = 178/200 (89%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTAVGA+IP Sbjct: 147 GGPGQAMSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIP 206 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAP Sbjct: 207 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAP 266 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTG+IV+AATNRADILDS Sbjct: 267 CIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDS 326 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQVSVDVPD R Sbjct: 327 ALLRPGRFDRQVSVDVPDFR 346
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 324 bits (831), Expect = 1e-88 Identities = 159/198 (80%), Positives = 175/198 (88%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GGPG + FG+SKA+FQM+ TGV FDDVAG+DEAK++ EVV FLK+PERFTAVGA+IP Sbjct: 146 GGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIP 205 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP Sbjct: 206 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 265 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 C++F+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LDS Sbjct: 266 CLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDS 325 Query: 541 ALLRPGRFDRQVSVDVPD 594 AL+RPGRFDRQV VD PD Sbjct: 326 ALMRPGRFDRQVMVDAPD 343
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 314 bits (805), Expect = 1e-85 Identities = 155/197 (78%), Positives = 174/197 (88%) Frame = +1 Query: 10 GFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGV 189 G + FG+SKA+FQME TGV FDDVAG+DEAK++ EVV FLK+PE+FTA+GA+IP+GV Sbjct: 188 GQAMSFGKSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGV 247 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 369 LL+GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+V Sbjct: 248 LLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLV 307 Query: 370 FVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALL 549 F+DEIDAV NDEREQTLNQLLTEMDGFEGN+GIIV+AATNR D+LD ALL Sbjct: 308 FIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALL 367 Query: 550 RPGRFDRQVSVDVPDVR 600 RPGRFDRQV+VD PDV+ Sbjct: 368 RPGRFDRQVTVDYPDVQ 384
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 303 bits (776), Expect = 3e-82 Identities = 149/194 (76%), Positives = 167/194 (86%) Frame = +1 Query: 19 LGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 L FG+SKA+FQM TG+ FDDVAG++EAK++ EVV FLK P +F AVGA IPKGVLLV Sbjct: 134 LNFGKSKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLV 193 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC+VF+D Sbjct: 194 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFID 253 Query: 379 EIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPG 558 EIDAV NDEREQTLNQLLTEMDGFEGNTG+IV+AATNR D+LD+ALLRPG Sbjct: 254 EIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPG 313 Query: 559 RFDRQVSVDVPDVR 600 RFDRQ+ V +PDV+ Sbjct: 314 RFDRQIMVSMPDVK 327
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 299 bits (765), Expect = 5e-81 Identities = 151/198 (76%), Positives = 169/198 (85%), Gaps = 1/198 (0%) Frame = +1 Query: 4 GPGFP-LGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GPG + FG+SKA+ QMEP T VTF DVAG+++AK + EVV+FLK +RFT +GA+IP Sbjct: 135 GPGSQAMNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIP 194 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK NAP Sbjct: 195 KGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAP 254 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQTLNQLLTEMDGFEGNTGII+VAATNR D+LDS Sbjct: 255 CIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDS 314 Query: 541 ALLRPGRFDRQVSVDVPD 594 AL+RPGRFDRQV VD PD Sbjct: 315 ALMRPGRFDRQVVVDRPD 332
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 296 bits (758), Expect = 3e-80 Identities = 145/199 (72%), Positives = 168/199 (84%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 224 GGLGGPMDFGRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 283 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 284 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 343 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDS Sbjct: 344 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 403 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQV+VD PDV Sbjct: 404 ALLRPGRFDRQVTVDRPDV 422
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 296 bits (757), Expect = 4e-80 Identities = 145/199 (72%), Positives = 168/199 (84%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 227 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 286 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 346 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDS Sbjct: 347 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 406 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQV+VD PDV Sbjct: 407 ALLRPGRFDRQVTVDRPDV 425
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 294 bits (753), Expect = 1e-79 Identities = 145/198 (73%), Positives = 164/198 (82%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 GPG FG++KA+F ME TG+ F+DVAG++EAK++ E+V FLK +FT VGA IPK Sbjct: 146 GPGQAFNFGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPK 205 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 GVLLVGPPGTGKTLLAKAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APC Sbjct: 206 GVLLVGPPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPC 265 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 IVF+DEIDAV NDEREQTLNQLLTEMDGF G+TG+IVVAATNR D+LDSA Sbjct: 266 IVFIDEIDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSA 325 Query: 544 LLRPGRFDRQVSVDVPDV 597 LLRPGRFDRQ+ V +P++ Sbjct: 326 LLRPGRFDRQIMVSLPNI 343
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 294 bits (753), Expect = 1e-79 Identities = 144/199 (72%), Positives = 167/199 (83%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 227 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 286 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 287 KGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 346 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDS Sbjct: 347 CIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 406 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQV+VD PDV Sbjct: 407 ALLRPGRFDRQVTVDRPDV 425
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 294 bits (753), Expect = 1e-79 Identities = 144/199 (72%), Positives = 168/199 (84%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 236 GGLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 295 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK AP Sbjct: 296 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAP 355 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDS Sbjct: 356 CIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 415 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQV+VD PDV Sbjct: 416 ALLRPGRFDRQVTVDRPDV 434
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 291 bits (744), Expect = 1e-78 Identities = 141/199 (70%), Positives = 169/199 (84%), Gaps = 1/199 (0%) Frame = +1 Query: 1 GGPG-FPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ G+S A+F+ P+TGV+F D+AG+DEAK +F E+V FLK+P+++T VGA+I Sbjct: 159 GGSGQSPMSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKI 218 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKG+LLVGPPGTGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENA Sbjct: 219 PKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENA 278 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILD 537 PCIVF+DEIDAV NDEREQTLNQLLTEMDGF+ N G+IVV ATNRADILD Sbjct: 279 PCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILD 338 Query: 538 SALLRPGRFDRQVSVDVPD 594 +ALLRPGRFDRQV+V++PD Sbjct: 339 AALLRPGRFDRQVTVNLPD 357
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 290 bits (742), Expect = 2e-78 Identities = 142/199 (71%), Positives = 166/199 (83%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IP Sbjct: 204 GGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIP 263 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG LLVGPPGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK AP Sbjct: 264 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAP 323 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CIVF+DEIDAV NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDS Sbjct: 324 CIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDS 383 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPG+FDRQV+VD PDV Sbjct: 384 ALLRPGKFDRQVTVDRPDV 402
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 282 bits (721), Expect = 6e-76 Identities = 142/199 (71%), Positives = 159/199 (79%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG + FG+SKAK E V F DVAG DE KQ+ +EVVEFLK P +F +GARIP Sbjct: 135 GGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIP 194 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 254 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 C++F+DEIDAV +DEREQTLNQLL EMDGF N GII++AATNRADILD Sbjct: 255 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 314 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQ++VD PDV Sbjct: 315 ALLRPGRFDRQITVDRPDV 333
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 281 bits (720), Expect = 8e-76 Identities = 141/199 (70%), Positives = 160/199 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG + FG+SKAK E F DVAG DE KQ+ +EVVEFLK P +F+A+GARIP Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLLVGPPGTGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQLL EMDGF N GII++AATNRADILD Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 319 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQ+ V+ PDV Sbjct: 320 ALLRPGRFDRQIQVNRPDV 338
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 271 bits (694), Expect = 8e-73 Identities = 141/201 (70%), Positives = 161/201 (80%), Gaps = 1/201 (0%) Frame = +1 Query: 1 GGPGF-PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARI Sbjct: 160 GGNGRNPMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARI 219 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P GVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ A Sbjct: 220 PAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA 279 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILD 537 P I+F+DEIDAV NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD Sbjct: 280 PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLD 339 Query: 538 SALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDR+V V PDV+ Sbjct: 340 PALLRPGRFDRKVLVGRPDVK 360
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 271 bits (694), Expect = 8e-73 Identities = 141/201 (70%), Positives = 161/201 (80%), Gaps = 1/201 (0%) Frame = +1 Query: 1 GGPGF-PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G P+ FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARI Sbjct: 160 GGNGRNPMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARI 219 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P GVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ A Sbjct: 220 PAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAA 279 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILD 537 P I+F+DEIDAV NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD Sbjct: 280 PAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLD 339 Query: 538 SALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDR+V V PDV+ Sbjct: 340 PALLRPGRFDRKVLVGRPDVK 360
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 271 bits (693), Expect = 1e-72 Identities = 128/198 (64%), Positives = 158/198 (79%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G +GFG+SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPK Sbjct: 130 GGGKAMGFGKSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPK 189 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPC Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 I+F+DEIDAV NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD A Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRA 309 Query: 544 LLRPGRFDRQVSVDVPDV 597 LLRPGRFDRQ++V PD+ Sbjct: 310 LLRPGRFDRQIAVANPDI 327
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 271 bits (693), Expect = 1e-72 Identities = 128/198 (64%), Positives = 158/198 (79%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G +GFG+SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPK Sbjct: 130 GGGKAMGFGKSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPK 189 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPC Sbjct: 190 GCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPC 249 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 I+F+DEIDAV NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD A Sbjct: 250 IIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRA 309 Query: 544 LLRPGRFDRQVSVDVPDV 597 LLRPGRFDRQ++V PD+ Sbjct: 310 LLRPGRFDRQIAVANPDI 327
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 271 bits (692), Expect = 1e-72 Identities = 136/200 (68%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVVVGLPDVR 325
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 271 bits (692), Expect = 1e-72 Identities = 136/200 (68%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVVVGLPDVR 325
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 271 bits (692), Expect = 1e-72 Identities = 136/200 (68%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVVVGLPDVR 325
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 271 bits (692), Expect = 1e-72 Identities = 136/200 (68%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVVVGLPDVR 325
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 271 bits (692), Expect = 1e-72 Identities = 136/200 (68%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ AP Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVVVGLPDVR 325
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 268 bits (684), Expect = 1e-71 Identities = 132/200 (66%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ A+++AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN G+I++AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PDVR Sbjct: 306 ALLRPGRFDRQVIVALPDVR 325
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 267 bits (682), Expect = 2e-71 Identities = 129/200 (64%), Positives = 160/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+S+AK + VTF DVAG DEAK++ E+V+FL+ P +F +G +IP Sbjct: 125 GGGGKAMSFGKSRAKMLNQDQIKVTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIP 184 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLA+AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAP Sbjct: 185 KGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAP 244 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 C++F+DEIDAV +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD Sbjct: 245 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDP 304 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 AL RPGRFDRQV V +PDV+ Sbjct: 305 ALTRPGRFDRQVVVGLPDVK 324
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 267 bits (682), Expect = 2e-71 Identities = 130/200 (65%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E +TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ +++ AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQ+ V +PD+R Sbjct: 306 ALLRPGRFDRQIFVALPDIR 325
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 266 bits (681), Expect = 3e-71 Identities = 131/200 (65%), Positives = 161/200 (80%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G + FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IP Sbjct: 127 GGKG-AMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIP 185 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ ++++AP Sbjct: 186 KGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAP 245 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+F+DEIDAV +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD Sbjct: 246 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDP 305 Query: 541 ALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDRQV V +PD+R Sbjct: 306 ALLRPGRFDRQVIVALPDIR 325
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 263 bits (672), Expect = 3e-70 Identities = 139/202 (68%), Positives = 161/202 (79%), Gaps = 3/202 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 G PG L F +SKAK +E +T VTFDDVAGV+EAK + EVV+FLK P+R+TA+GA+I Sbjct: 147 GAPGGALAFTKSKAKVYVEGDSTKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKI 206 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKGVLLVGPPGTGKTLLAKA AGEAGVPFF ISGSEFVE+FVG GA+RVRDLF++AK+ A Sbjct: 207 PKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQA 266 Query: 358 PCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADI 531 PCIVF+DE+DA+ NDEREQTLNQLLTEMDGF +IV+AATNR + Sbjct: 267 PCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPET 326 Query: 532 LDSALLRPGRFDRQVSVDVPDV 597 LD ALLRPGRFDRQV VD PD+ Sbjct: 327 LDPALLRPGRFDRQVLVDRPDL 348
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 261 bits (668), Expect = 8e-70 Identities = 130/199 (65%), Positives = 156/199 (78%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDP 316 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQ+ V PD+ Sbjct: 317 ALLRPGRFDRQIPVSNPDL 335
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 261 bits (668), Expect = 8e-70 Identities = 130/199 (65%), Positives = 156/199 (78%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD Sbjct: 257 CIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDP 316 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQ+ V PD+ Sbjct: 317 ALLRPGRFDRQIPVSNPDL 335
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 259 bits (662), Expect = 4e-69 Identities = 132/201 (65%), Positives = 159/201 (79%), Gaps = 1/201 (0%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG G P+ FG+S+AK Q + V F DVAG +E KQ+ +EVV+FLK P+++ +GARIP Sbjct: 167 GGGGNPMSFGKSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIP 226 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 GVLL GPPGTGKTLLAKA+AGEAGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP Sbjct: 227 AGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAP 286 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILD 537 I+F+DEIDAV NDEREQTLNQLL EMDGF+ + +IV+AATNR+D+LD Sbjct: 287 SIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLD 346 Query: 538 SALLRPGRFDRQVSVDVPDVR 600 ALLRPGRFDR+V V PDV+ Sbjct: 347 PALLRPGRFDRKVLVGAPDVK 367
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 258 bits (658), Expect = 1e-68 Identities = 129/199 (64%), Positives = 154/199 (77%) Frame = +1 Query: 1 GGPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIP 180 GG GFG+S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ +GA+IP Sbjct: 137 GGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIP 196 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 360 KGVLL GPPGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+P Sbjct: 197 KGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSP 256 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 CI+FVDEIDAV +DEREQTLNQLL EMDGF G+I++AATNR DILD Sbjct: 257 CIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDP 316 Query: 541 ALLRPGRFDRQVSVDVPDV 597 ALLRPGRFDRQ+ V PD+ Sbjct: 317 ALLRPGRFDRQIPVSNPDL 335
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 251 bits (642), Expect = 9e-67 Identities = 123/191 (64%), Positives = 153/191 (80%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G +++ E F DVAGVDEAK++ MEVV+FLK P+++T +G +IP+GVLLVGPP Sbjct: 124 GHARSAAVEEGKVTTRFADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPP 183 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLA+A+AGEA VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+D Sbjct: 184 GTGKTLLARAVAGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELD 243 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 A+ NDEREQTLNQLL EMDGF+ TG+I++AATNR D+LD ALLRPGRFD Sbjct: 244 AI-GKSRLNAIHSNDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFD 302 Query: 568 RQVSVDVPDVR 600 RQV VD PD++ Sbjct: 303 RQVCVDRPDLK 313
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 248 bits (633), Expect = 1e-65 Identities = 125/193 (64%), Positives = 151/193 (78%), Gaps = 1/193 (0%) Frame = +1 Query: 25 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGP 204 FG+S+AK +E VTF DVAG++E K++ E++E+LK P +F +G R PKGVLL G Sbjct: 137 FGKSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGE 196 Query: 205 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 384 PG GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEI Sbjct: 197 PGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEI 256 Query: 385 DAVXXXXXXX-XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGR 561 DAV +DEREQTLNQLL EMDGF+ + GIIV+AATNR DILD ALLRPGR Sbjct: 257 DAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGR 316 Query: 562 FDRQVSVDVPDVR 600 FDRQ+ + PDVR Sbjct: 317 FDRQIFIPKPDVR 329
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 242 bits (618), Expect = 5e-64 Identities = 123/201 (61%), Positives = 149/201 (74%), Gaps = 2/201 (0%) Frame = +1 Query: 1 GGPGFPLGFGQSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 G G G +SKAK F E + + F DVAG DEAK++ ME V FLK+P R+ +GA+I Sbjct: 321 GSRGGIFGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKI 380 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P+G +L GPPGTGKTLLAKA AGEAGVPF+ +SGSEFVEMFVGVGA+RVRDLFK A+ENA Sbjct: 381 PRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENA 440 Query: 358 PCIVFVDEIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 P IVF+DEIDA+ NDERE TLNQ+L EMDGF ++V+A TNR DIL Sbjct: 441 PSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDIL 500 Query: 535 DSALLRPGRFDRQVSVDVPDV 597 D ALLRPGRFDR +++D P++ Sbjct: 501 DKALLRPGRFDRHINIDKPEL 521
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 238 bits (607), Expect = 1e-62 Identities = 121/202 (59%), Positives = 149/202 (73%), Gaps = 3/202 (1%) Frame = +1 Query: 1 GGPGFPLGFGQSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G G+S+AK F E + ++F +VAG DEAKQ+ ME V FLK P ++T +GA+I Sbjct: 261 GGLGGMFNVGKSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKI 320 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 P+G +L GPPGTGKTLLAKA AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+ A Sbjct: 321 PRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMA 380 Query: 358 PCIVFVDEIDAV--XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADI 531 P I+F+DEIDA+ NDERE TLNQLL EMDGF + ++V+A TNR D+ Sbjct: 381 PSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDV 440 Query: 532 LDSALLRPGRFDRQVSVDVPDV 597 LD+AL+RPGRFDR + +D PDV Sbjct: 441 LDNALMRPGRFDRHIQIDSPDV 462
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 237 bits (605), Expect = 2e-62 Identities = 124/195 (63%), Positives = 149/195 (76%), Gaps = 2/195 (1%) Frame = +1 Query: 22 GFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 201 G G SK E V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVG Sbjct: 158 GMGSSKKLINAE-KPKVRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVG 216 Query: 202 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 381 PPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF AK+ AP I+F+DE Sbjct: 217 PPGTGKTLLAKAVAGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDE 276 Query: 382 IDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRP 555 IDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD ALLRP Sbjct: 277 IDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRP 336 Query: 556 GRFDRQVSVDVPDVR 600 GRFDRQV VD PD + Sbjct: 337 GRFDRQVLVDKPDFK 351
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 237 bits (604), Expect = 2e-62 Identities = 125/194 (64%), Positives = 150/194 (77%), Gaps = 3/194 (1%) Frame = +1 Query: 22 GFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 G G +K E PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLV Sbjct: 152 GMGSAKKLINAEKPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLV 209 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+D Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269 Query: 379 EIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLR 552 EIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+R Sbjct: 270 EIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMR 329 Query: 553 PGRFDRQVSVDVPD 594 PGRFDRQV VD PD Sbjct: 330 PGRFDRQVLVDKPD 343
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 237 bits (604), Expect = 2e-62 Identities = 125/194 (64%), Positives = 150/194 (77%), Gaps = 3/194 (1%) Frame = +1 Query: 22 GFGQSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLV 198 G G +K E PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLV Sbjct: 152 GMGSAKKLINAEKPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLV 209 Query: 199 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 378 GPPGTGKTLLAKA+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+D Sbjct: 210 GPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFID 269 Query: 379 EIDAV-XXXXXXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLR 552 EIDA+ NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+R Sbjct: 270 EIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMR 329 Query: 553 PGRFDRQVSVDVPD 594 PGRFDRQV VD PD Sbjct: 330 PGRFDRQVLVDKPD 343
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 229 bits (583), Expect = 6e-60 Identities = 114/199 (57%), Positives = 143/199 (71%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G G++ AK ++ V F DVAG +EAK + ME V FLK P+++ +GA+IPK Sbjct: 284 GMGGLFSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPK 342 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPC Sbjct: 343 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 402 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 I+F+DEIDAV E+E TLNQLL EMDGF T ++++A TNR DILD A Sbjct: 403 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 462 Query: 544 LLRPGRFDRQVSVDVPDVR 600 LLRPGRFDRQ+ + PD++ Sbjct: 463 LLRPGRFDRQIFIGPPDIK 481
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 229 bits (583), Expect = 6e-60 Identities = 114/199 (57%), Positives = 143/199 (71%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPK 183 G G G++ AK ++ V F DVAG +EAK + ME V FLK P+++ +GA+IPK Sbjct: 283 GMGGLFSVGETTAKV-LKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPK 341 Query: 184 GVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 G +L GPPGTGKTLLAKA AGEA VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPC Sbjct: 342 GAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPC 401 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 I+F+DEIDAV E+E TLNQLL EMDGF T ++++A TNR DILD A Sbjct: 402 ILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPA 461 Query: 544 LLRPGRFDRQVSVDVPDVR 600 LLRPGRFDRQ+ + PD++ Sbjct: 462 LLRPGRFDRQIFIGPPDIK 480
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 226 bits (577), Expect = 3e-59 Identities = 108/191 (56%), Positives = 142/191 (74%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+++AK + V FD++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPP Sbjct: 214 GKTQAKLA---KSSVRFDNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPP 270 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLAKA+AGEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID Sbjct: 271 GTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID 330 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 +V EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFD Sbjct: 331 SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFD 390 Query: 568 RQVSVDVPDVR 600 R + +++PD++ Sbjct: 391 RHIQINLPDIK 401
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 225 bits (574), Expect = 7e-59 Identities = 112/201 (55%), Positives = 146/201 (72%), Gaps = 1/201 (0%) Frame = +1 Query: 1 GGPGFPL-GFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI 177 GG G L G++ AK ++ N V F DVAG +EAK + ME V FLK P+++ +GA+I Sbjct: 148 GGRGGGLFSVGETTAKI-LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKI 206 Query: 178 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 PKG +L GPPGTGKTLLAKA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+++A Sbjct: 207 PKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHA 266 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILD 537 PCI+F+DEIDA+ E+E TLNQ+L EMDGF +T ++V+A TNR DILD Sbjct: 267 PCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILD 326 Query: 538 SALLRPGRFDRQVSVDVPDVR 600 AL RPGRFDRQ+ + PD++ Sbjct: 327 PALTRPGRFDRQIYIGPPDIK 347
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 225 bits (573), Expect = 9e-59 Identities = 108/177 (61%), Positives = 140/177 (79%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 395 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+ Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 452
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 224 bits (572), Expect = 1e-58 Identities = 108/177 (61%), Positives = 140/177 (79%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 453 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+ Sbjct: 454 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 510
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 223 bits (568), Expect = 3e-58 Identities = 107/191 (56%), Positives = 141/191 (73%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+++AK + V F ++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPP Sbjct: 217 GKTQAKLA---KSTVKFTNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPP 273 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLLAKA+AGEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID Sbjct: 274 GTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEID 333 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 +V EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFD Sbjct: 334 SVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFD 393 Query: 568 RQVSVDVPDVR 600 R + +++PD++ Sbjct: 394 RHIQINLPDIK 404
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 221 bits (563), Expect = 1e-57 Identities = 107/177 (60%), Positives = 139/177 (78%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIEFPMH 395 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 QT+ QLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+ Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 452
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 219 bits (559), Expect = 4e-57 Identities = 104/179 (58%), Positives = 135/179 (75%) Frame = +1 Query: 64 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 T F D+AG E ++ E+V++LK P+++ A GAR PKG+LL GPPGTGKTLLAKA A Sbjct: 207 TDKKFTDIAGNKEPIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATA 266 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 GEA VPFF IS S FVE++VG+GA RVR++FK+A++ AP I+F+DE+DAV Sbjct: 267 GEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGG 326 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 NDEREQTLNQ+L EMDG N GI+++ ATNR D+LD ALLRPGRFDR ++V +PD++ Sbjct: 327 GNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIK 385
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 212 bits (540), Expect = 6e-55 Identities = 108/193 (55%), Positives = 137/193 (70%) Frame = +1 Query: 13 FPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVL 192 FP Q+ F NT V+F DV G DE K++ ++VVEFL+ PE+F +GA++PKGVL Sbjct: 146 FPKFLDQNIGSFA--ENTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVL 203 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 LVGPPG GKTLLAKA++GEA VPF SGS F E+ VG+GASR+R LF AK+N+PC+VF Sbjct: 204 LVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVF 263 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 552 +DEID+V + QT+NQLL EMDGF+ GIIV+ ATN+A++LD ALLR Sbjct: 264 IDEIDSV--GGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLR 321 Query: 553 PGRFDRQVSVDVP 591 PGRFD Q+ V P Sbjct: 322 PGRFDVQIHVSPP 334
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 209 bits (533), Expect = 4e-54 Identities = 105/179 (58%), Positives = 133/179 (74%), Gaps = 1/179 (0%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXX 423 EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 N E EQTLNQLL EMDG +IV+A+TNRADILD AL+RPGR DR V +D+P ++ Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQ 483
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 209 bits (531), Expect = 6e-54 Identities = 102/179 (56%), Positives = 132/179 (73%) Frame = +1 Query: 64 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 T V FDDV G DEA+ + E+V+FLK P ++ ++G ++PKGVLL GPPGTGKTLLA+A A Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 GEAGV FF +SGSEF E++VGVGA R+RDLF +A+ AP I+F+DE+DA+ Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 +QTLNQLL E+DGF +GII++ ATN + LD AL RPGRFD+ V+VD+PDVR Sbjct: 396 Y---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVR 451
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 206 bits (524), Expect = 4e-53 Identities = 105/168 (62%), Positives = 128/168 (76%) Frame = +1 Query: 94 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 273 +DEAK + E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF Sbjct: 206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHT 265 Query: 274 SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLN 453 +GSEF E+ VG GA RVRDLF KAK APCI+F+DEID+V + QT+N Sbjct: 266 AGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTIN 323 Query: 454 QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 QLL+EMDGF N GIIV+AATNR D LD ALLRPGRFD +V+V PD+ Sbjct: 324 QLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDL 371
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 189 bits (479), Expect = 7e-48 Identities = 95/183 (51%), Positives = 123/183 (67%), Gaps = 1/183 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E ++F+D+ G++ +D EVVE LK PE F VG PKGVLL GPPGTGKTL Sbjct: 138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTL 197 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F + GSE V+ F+G GA VRD+FK AKE +PCI+F+DEIDAV Sbjct: 198 LAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR 257 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++TL QLL EMDGF+ + ++AATNR DILD A+LRPGRFDR + + Sbjct: 258 TESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIS 317 Query: 586 VPD 594 +PD Sbjct: 318 MPD 320
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 185 bits (469), Expect = 1e-46 Identities = 92/183 (50%), Positives = 121/183 (66%), Gaps = 1/183 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ V ++D+ G+++ Q+ EVVE LK PE F VG PKG+LL GPPGTGKTL Sbjct: 160 EVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTL 219 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F + GSE V+ F+G GAS V+D+FK AKE AP I+F+DEIDA+ Sbjct: 220 LAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKR 279 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++TL QLL EMDGF+ + ++ ATNR DILD A+LRPGRFDR + V Sbjct: 280 TDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVP 339 Query: 586 VPD 594 PD Sbjct: 340 APD 342
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 184 bits (467), Expect = 2e-46 Identities = 94/183 (51%), Positives = 124/183 (67%), Gaps = 1/183 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + V++DD+ G+DE ++ EVVE LK+PE F VG PKGVLL GPPGTGKTL Sbjct: 169 EVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTL 228 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A A F ++ E V+ F+G GA VR+LF+ A+E AP I+F+DEIDA+ Sbjct: 229 LAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARR 288 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++TL QLL EMDGF+ I V+AATNR DILD ALLRPGRFDR + + Sbjct: 289 MRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIP 348 Query: 586 VPD 594 +PD Sbjct: 349 LPD 351
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 179 bits (453), Expect = 7e-45 Identities = 92/183 (50%), Positives = 120/183 (65%), Gaps = 1/183 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E V+++ + G++E ++ E VE LKKPE F +G PKGVLL GPPGTGKTL Sbjct: 141 EVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTL 200 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E F I SEFV ++G GA VR +F+ AKE +P I+F+DEIDAV Sbjct: 201 LAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKR 260 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++TL QLL E+DGFE + +VAATNR DILD ALLRPGRFDR + V Sbjct: 261 LKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVP 320 Query: 586 VPD 594 +P+ Sbjct: 321 LPN 323
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 177 bits (449), Expect = 2e-44 Identities = 88/183 (48%), Positives = 121/183 (66%), Gaps = 1/183 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++E V+++D+ G+D ++ E VE L KPE F VG PKGVLL GPPGTGKT Sbjct: 130 FEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKT 189 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A + F + GSEFV+ ++G GA VR++F+ AKE AP I+F+DE+DA+ Sbjct: 190 LLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAAR 249 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 + E ++T+ QLL E+DGF+ + V+ ATNR DILD A+LRPGRFDR + V Sbjct: 250 RTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEV 309 Query: 583 DVP 591 +P Sbjct: 310 PLP 312
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 176 bits (447), Expect = 4e-44 Identities = 90/178 (50%), Positives = 118/178 (66%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ ++ G++E ++ EVVE LK PE F +G PKGVLL GPPGTGKT+LAKA+A Sbjct: 131 VTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVAT 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F + SEF + FVG GA VR+LF+ AK AP I+F+DEIDA+ Sbjct: 191 ESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSG 250 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V +PD + Sbjct: 251 EREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFK 308
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 176 bits (446), Expect = 5e-44 Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+++ Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 127 FEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKT 186 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A F + GSE V F+G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 187 LMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 246 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 247 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 306 Query: 583 DVPD 594 +PD Sbjct: 307 PLPD 310
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 176 bits (445), Expect = 6e-44 Identities = 92/184 (50%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 126 FEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 185 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKAIA E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 186 LMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 245 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 246 RLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 305 Query: 583 DVPD 594 +PD Sbjct: 306 PLPD 309
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 175 bits (443), Expect = 1e-43 Identities = 88/176 (50%), Positives = 118/176 (67%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++E KQ+ E VE+ LK E F +G R PKGVLL GPPGTGKTLLAKA+A Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G F S+ G E +VG +R++F+KA+++APCI+F DEIDA+ Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA 568 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQLLTE+DG E ++V+AATNR DI+D ALLRPGR DR + V VPD Sbjct: 569 --VTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPD 622 Score = 162 bits (411), Expect = 5e-40 Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+ E + E++E ++ PE F +G PKGVLLVGPPGTGKTLLAKA+A Sbjct: 176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 EAG F+ I+G E + +VG +R +F++A+ENAP I+F+DEIDA+ Sbjct: 236 EAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI---APKRDEAT 292 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + + QLLT MDG +G ++V+ ATNR + LD AL RPGRFDR++ + VPD Sbjct: 293 GEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPD 348
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 174 bits (442), Expect = 1e-43 Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 308 Query: 583 DVPD 594 +PD Sbjct: 309 PLPD 312
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 174 bits (442), Expect = 1e-43 Identities = 91/184 (49%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 308 Query: 583 DVPD 594 +PD Sbjct: 309 PLPD 312
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 173 bits (438), Expect = 4e-43 Identities = 87/183 (47%), Positives = 122/183 (66%), Gaps = 1/183 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + VT+ D+ G+D+ ++ E VE L PE+F AVG P GVLL GPPGTGKT+ Sbjct: 142 EVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTM 201 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A + F ++GSE V F+G G+ VRDLF+ A++ P I+F+DEIDAV Sbjct: 202 LAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKR 261 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++T+ QLL+EMDGF+ I ++AATNR D+LDSA+LRPGRFDR + V Sbjct: 262 TDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVP 321 Query: 586 VPD 594 P+ Sbjct: 322 NPN 324
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 171 bits (434), Expect = 1e-42 Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 1/184 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F++ V + D+ G++E + EV+E LK PE F +G PKGVLL GPPGTGKT Sbjct: 123 FEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKT 182 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+ F + SEF + FVG GA VR++F+ A+ AP IVF+DEIDA+ Sbjct: 183 LLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAK 242 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V Sbjct: 243 RVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEV 302 Query: 583 DVPD 594 +P+ Sbjct: 303 PLPN 306
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 171 bits (432), Expect = 2e-42 Identities = 85/187 (45%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Frame = +1 Query: 40 AKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTG 216 A ++ + V +D + G+DE Q+ E VE L PERF +G PKGVLL G PGTG Sbjct: 146 AAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTG 205 Query: 217 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX 396 KTLLAKA+A F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 206 KTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIA 265 Query: 397 XXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 576 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V Sbjct: 266 ARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLV 325 Query: 577 SVDVPDV 597 V +P + Sbjct: 326 HVPMPGI 332
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 170 bits (430), Expect = 3e-42 Identities = 84/177 (47%), Positives = 116/177 (65%), Gaps = 1/177 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +D + G+DE Q+ E VE L +PERF +G PKGVLL G PGTGKTLLAKA+A Sbjct: 156 VDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 216 RTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGA 275 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V V +P + Sbjct: 276 DREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGI 332
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 170 bits (430), Expect = 3e-42 Identities = 84/184 (45%), Positives = 121/184 (65%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +++ + V ++D+ G+D+ ++ E VE +K P F VG P GVLL GPPGTGKTL Sbjct: 139 EVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTL 198 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 +AKA+A + F ++GSE V F+G GA VRDLF+ A+++ P +VF+DEIDA+ Sbjct: 199 MAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKR 258 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++T+ QLL+EMDGF+ I ++AATNR D+LD A+LRPGRFDR + V Sbjct: 259 TDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVP 318 Query: 586 VPDV 597 P+V Sbjct: 319 HPNV 322
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 169 bits (427), Expect = 7e-42 Identities = 87/185 (47%), Positives = 119/185 (64%), Gaps = 1/185 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E V F DV G++E ++ E V +K P F +G PKGVLL GPPGTGKTL Sbjct: 129 EVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTL 188 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+AGE F + GSE V F+G GA VR++F+ A+E AP I+F+DEIDA+ Sbjct: 189 LAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKR 248 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 + E ++T+ QLL E+DGF+ + V+AATNR D++D A+LRPGRFDR + V Sbjct: 249 VDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVP 308 Query: 586 VPDVR 600 +P +R Sbjct: 309 LPSLR 313
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 168 bits (425), Expect = 1e-41 Identities = 84/178 (47%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 277 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 334
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 167 bits (423), Expect = 2e-41 Identities = 83/178 (46%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 272 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 166 bits (419), Expect = 6e-41 Identities = 81/178 (45%), Positives = 119/178 (66%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ ++EAKQ E+VE+ ++ PE F +G PKG+LL GPPGTGKTLLA+A+A Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G F +++G E + F G R+R++FK+A+ENAP I+F+DEIDA+ Sbjct: 269 EIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI---APKREDVT 325 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + ++ + QLLT MDG +G +IV+ ATNR D +D AL RPGRFDR++ + PD + Sbjct: 326 GEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383 Score = 162 bits (411), Expect = 5e-40 Identities = 83/176 (47%), Positives = 113/176 (64%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G+D KQ E VE+ L+ PE FT G PKG+LL GPPGTGKT+LAKA+A Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G F ++ G E + +VG +R++F+KA++ AP ++F DEID++ Sbjct: 544 ESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG 603 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ER +NQLL EMDG ++++AATNR DILD ALLRPGRFDR + V PD Sbjct: 604 VTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPD 657
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 165 bits (417), Expect = 1e-40 Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++ AKQ+ ME VE+ LK PE F A + P+G+LL GPPGTGKTLLAKA+A Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F S+ G E + +VG VR++F+KA++ APC++F DEID++ Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSH 571 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ER ++QLLTE+DG E ++V+AATNR D++D ALLRPGR +R + + PD Sbjct: 572 VTER--VVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPD 625 Score = 159 bits (401), Expect = 8e-39 Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+ + E++E LK PE F +G PKGVLL GPPGTGKTL+AKA+A Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F ISG E + + G R+R++F++AKENAP I+F+DEID++ Sbjct: 239 EVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSI---APKREEVT 295 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + + QLL MDG E +IV+AATNR D +D AL RPGRFDR++ + VPD Sbjct: 296 GEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPD 351
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 164 bits (416), Expect = 1e-40 Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPN 320
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 164 bits (416), Expect = 1e-40 Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 1/190 (0%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 210 S + Q + V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG Sbjct: 147 SISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPG 206 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 GKT+LA A+A F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA Sbjct: 207 CGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDA 266 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 570 + + E ++ L +LL +MDGF+ T + V+ ATNRAD LD ALLRPGR DR Sbjct: 267 IATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 326 Query: 571 QVSVDVPDVR 600 ++ +PD R Sbjct: 327 KIEFPLPDRR 336
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 164 bits (416), Expect = 1e-40 Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 202 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 203 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 262 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ Sbjct: 263 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPN 317
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 163 bits (413), Expect = 3e-40 Identities = 84/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGD 260 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 315
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 163 bits (412), Expect = 4e-40 Identities = 80/170 (47%), Positives = 113/170 (66%), Gaps = 1/170 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV ++G G VRD+F+ A+ENAP I+F+DE+D++ Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 576 + E ++ L +LLT+MDGF+ +T + V+ ATNRAD LD ALLRPGR DR++ Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKI 338
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 163 bits (412), Expect = 4e-40 Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +++ D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA+ Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ +T + V+ ATNR D LD ALLRPGR DR++ +PD R Sbjct: 278 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 335
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 162 bits (411), Expect = 5e-40 Identities = 82/176 (46%), Positives = 113/176 (64%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +TFD + G+ E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLAKA+A Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 G F S V+ ++G A +R++F AKE+ PCI+F+DE+DA+ Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + E ++TL +LLT+MDGF+ ++ ATNR D LD ALLRPGR DR+V + +P+ Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 162 bits (411), Expect = 5e-40 Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVAN 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV+ ++G G VRD+F+ A+E AP IVF+DE+D++ Sbjct: 191 HTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSA 250 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGF+ + V+ ATNRAD +D ALLRPGR DR++ +PD R Sbjct: 251 DREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRR 308
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 162 bits (411), Expect = 5e-40 Identities = 79/179 (44%), Positives = 111/179 (62%), Gaps = 1/179 (0%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 + VT+DDV G+DE K++ E VE+ + P+++T G KGVL GPPGTGKTLLAKA Sbjct: 481 SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA 540 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 417 +A E F S+ G E + M+ G S +RD+F KA+ AP +VF+DE+D++ Sbjct: 541 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL 600 Query: 418 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQLLTEMDG + V+ ATNR D +D A+LRPGR D+ + V +PD Sbjct: 601 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPD 659 Score = 149 bits (376), Expect = 6e-36 Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G + E+VE L+ P+ F A+G + P+GVL+ GPPGTGKTL+A+A+A Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSI---APKRDKTN 327 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V + +PD Sbjct: 328 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPD 383
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 162 bits (410), Expect = 7e-40 Identities = 82/178 (46%), Positives = 117/178 (65%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F ++GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 + E ++ L +LL +MDGFE ++ + V+ ATNRAD LD ALLRPGR DR+ ++ P +R Sbjct: 283 DREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRK--IEFPSLR 338
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 162 bits (410), Expect = 7e-40 Identities = 79/173 (45%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE APCI+F+DEIDA+ + Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 162 bits (409), Expect = 9e-40 Identities = 79/177 (44%), Positives = 116/177 (65%), Gaps = 1/177 (0%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 243 G+T++D+ G++ Q E+VE +K P+ F +G P+GVLL GPPGTGKTLLAKA+A Sbjct: 185 GITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVA 244 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E FFSI+G E + + G ++R++F+ AK+++P I+F+DE+D++ Sbjct: 245 NETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSI---APKREDV 301 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + + QLLT MDG EG +IV+AATNR D +D AL RPGRFDR++ + VPD Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPD 358 Score = 160 bits (406), Expect = 2e-39 Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 1/177 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 +T+DDV G+ EAK + E VE+ L +PE+FT +G P GVLL GPPGTGKTL+AKA+A Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G + + +VG +R F+KA++ AP ++F DE+D++ Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSL--APGRGQTGG 576 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 N+ E+ +NQLLTE+DG E ++V+AATNR DI+D AL+R GRFDR V V P + Sbjct: 577 NNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGI 633
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 161 bits (407), Expect = 2e-39 Identities = 75/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD Sbjct: 597 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 652 Score = 148 bits (373), Expect = 1e-35 Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 2/177 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 427 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 161 bits (407), Expect = 2e-39 Identities = 80/170 (47%), Positives = 111/170 (65%), Gaps = 1/170 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 F + GSEFV+ ++G G VRD+F+ A+ENAP I+F+DEIDA+ Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 576 + E ++ L +LLT+MDGF+ + V+ ATNRAD LD ALLRPGR DR++ Sbjct: 251 DREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKI 300
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 160 bits (405), Expect = 3e-39 Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 1/173 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 169 YHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 160 bits (404), Expect = 3e-39 Identities = 83/189 (43%), Positives = 115/189 (60%), Gaps = 1/189 (0%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 210 S Q+E VT+ DV G E + EVVE L PERF +G PKG++L GPPG Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 TGKTL A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDA Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 283 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 570 + ++E ++T+ +L+T++DGF+ I V+ ATNR + LD AL+RPGR DR Sbjct: 284 IGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDR 343 Query: 571 QVSVDVPDV 597 +V +PD+ Sbjct: 344 KVEFGLPDL 352
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 160 bits (404), Expect = 3e-39 Identities = 81/184 (44%), Positives = 119/184 (64%), Gaps = 2/184 (1%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E T++ V G+DE ++ EV+E +K PE F ++G PKGV++ GPPGTGKTL Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA+A+A F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTR 265 Query: 406 XXXXXXXND-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 D E ++T+ +LL ++DGFE I ++ ATNR DILD ALLRPGR DR++ Sbjct: 266 TEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEF 325 Query: 583 DVPD 594 P+ Sbjct: 326 PNPN 329
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 159 bits (403), Expect = 4e-39 Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDA 597 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653 Score = 147 bits (372), Expect = 2e-35 Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 159 bits (403), Expect = 4e-39 Identities = 83/183 (45%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT+ DV G + + EVVE L PERF +G PKG+LL GPPGTGKTL Sbjct: 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDAV Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARF 319 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++E ++T+ +L+T++DGF+ I V+ ATNR + LD ALLRPGR DR+V + Sbjct: 320 DDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL 379 Query: 589 PDV 597 PD+ Sbjct: 380 PDL 382
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 159 bits (403), Expect = 4e-39 Identities = 77/173 (44%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + +RF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 175 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 234 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 235 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 294 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P Sbjct: 295 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 347
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 159 bits (403), Expect = 4e-39 Identities = 79/176 (44%), Positives = 116/176 (65%), Gaps = 1/176 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+D V G+ + ++ EV+E +K PE F ++G PKGV+L GPPGTGKTLLA+A+A Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SG+E V+ ++G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 E ++T+ +LL ++DGFE + I ++ ATNR DILD ALLRPGR DR++ P V Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 321
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 159 bits (403), Expect = 4e-39 Identities = 83/178 (46%), Positives = 117/178 (65%), Gaps = 3/178 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 ++F V G++E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 GV F + S V+ ++G A +R++F AKE+ PC++F+DEIDA+ Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248 Query: 427 NDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + E ++TL +LL +MDGF+ G T II+ ATNR D LD ALLRPGR DR++ + +P+ Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIM--ATNRPDTLDPALLRPGRLDRKIEIPLPN 304
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (402), Expect = 6e-39 Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 586 VPDV 597 +PD+ Sbjct: 344 LPDL 347
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (402), Expect = 6e-39 Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 586 VPDV 597 +PD+ Sbjct: 344 LPDL 347
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 159 bits (402), Expect = 6e-39 Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 586 VPDV 597 +PD+ Sbjct: 344 LPDL 347
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 159 bits (402), Expect = 6e-39 Identities = 77/174 (44%), Positives = 114/174 (65%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 358
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 159 bits (402), Expect = 6e-39 Identities = 77/174 (44%), Positives = 114/174 (65%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 358
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 159 bits (402), Expect = 6e-39 Identities = 74/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA 597 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD Sbjct: 598 GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653 Score = 148 bits (374), Expect = 1e-35 Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 159 bits (402), Expect = 6e-39 Identities = 77/174 (44%), Positives = 114/174 (65%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ Sbjct: 308 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 361
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 159 bits (402), Expect = 6e-39 Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344 Query: 586 VPDV 597 +PD+ Sbjct: 345 LPDL 348
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 159 bits (402), Expect = 6e-39 Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653 Score = 147 bits (372), Expect = 2e-35 Identities = 75/176 (42%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 159 bits (401), Expect = 8e-39 Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ DV G+D+ Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A + Sbjct: 186 TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQ 245 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F I GSE ++ ++G G VR+LF+ A+ENAP IVF+DEIDAV Sbjct: 246 TSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGE 305 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPD 360
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 158 bits (400), Expect = 1e-38 Identities = 83/176 (47%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G+++ K++ E VE L KP+ F +G R KG LL GPPG GKTLLAKA+A Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F SI G E + +VG +R++FKKAK+ AP IVF+DEID++ Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ER +NQLLT +DG E G++V+ ATNR DI+D ALLR GRFD+ + + PD Sbjct: 584 VTER--IVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPD 637 Score = 155 bits (392), Expect = 8e-38 Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 1/182 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E + ++++D+ G+ E E++E LK PE F +G PKGV+L GPPGTGKTL+ Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI 240 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A E+G F SI+G E + + G ++R++F KA+E AP I+F+DEID++ Sbjct: 241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSI---AP 297 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 + + + QLLT MDG + +IV+ ATNR D +D AL RPGRFDR++ + V Sbjct: 298 KREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGV 357 Query: 589 PD 594 PD Sbjct: 358 PD 359
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 158 bits (400), Expect = 1e-38 Identities = 82/175 (46%), Positives = 114/175 (65%), Gaps = 2/175 (1%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+D V G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 188 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 189 TDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGG 248 Query: 430 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 D E ++T+ +LL ++DGFE I V+ TNR DILD ALLRPGR DR++ P Sbjct: 249 DSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNP 303
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 158 bits (399), Expect = 1e-38 Identities = 77/173 (44%), Positives = 113/173 (65%), Gaps = 1/173 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 ++D+ G+++ Q+ +E + + E+F +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 165 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 224 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE +PCI+F+DEIDA+ + Sbjct: 225 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 284 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P Sbjct: 285 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 337
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 158 bits (399), Expect = 1e-38 Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 2/175 (1%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T++ V G+++ ++ EV+E +K PE F ++G PKG+LL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262 Query: 430 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 D E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 317
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 158 bits (399), Expect = 1e-38 Identities = 79/177 (44%), Positives = 111/177 (62%), Gaps = 1/177 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G D KQ+ E VE L + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ + Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGAD 267 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 E ++ L +LL +MDGF+ + + V+ ATNR D LD ALLRPGR DR++ +PD R Sbjct: 268 REVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 157 bits (398), Expect = 2e-38 Identities = 78/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDAV Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 301 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 302 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 157 bits (397), Expect = 2e-38 Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 158 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 217 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 218 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 277 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 278 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 337 Query: 589 PDV 597 PD+ Sbjct: 338 PDL 340
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 157 bits (397), Expect = 2e-38 Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 589 PDV 597 PD+ Sbjct: 339 PDL 341
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 157 bits (397), Expect = 2e-38 Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 589 PDV 597 PD+ Sbjct: 339 PDL 341
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 157 bits (397), Expect = 2e-38 Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 1/183 (0%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 589 PDV 597 PD+ Sbjct: 339 PDL 341
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 157 bits (396), Expect = 3e-38 Identities = 76/174 (43%), Positives = 113/174 (64%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 209 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 210 KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDR 269 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ T + V+AATNR DILD ALLR GR DR++ +P+ Sbjct: 270 EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 323
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 157 bits (396), Expect = 3e-38 Identities = 76/174 (43%), Positives = 113/174 (64%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 169 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 228 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 229 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 288 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ N + V+AATNR DILD ALLR GR DR++ +P+ Sbjct: 289 EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 342
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 156 bits (395), Expect = 4e-38 Identities = 82/184 (44%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 Q+E VT+ DV G + + EVVE L PER+ +G PKGVLL GPPGTGKTL Sbjct: 167 QVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDAV Sbjct: 227 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR+V Sbjct: 287 FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFA 346 Query: 586 VPDV 597 +PD+ Sbjct: 347 LPDL 350
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 156 bits (395), Expect = 4e-38 Identities = 72/176 (40%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 648 Score = 147 bits (370), Expect = 3e-35 Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 574 VSVDVPD 594 V + +PD Sbjct: 366 VDIGIPD 372
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 156 bits (395), Expect = 4e-38 Identities = 72/176 (40%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 648 Score = 147 bits (371), Expect = 2e-35 Identities = 78/187 (41%), Positives = 114/187 (60%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DDV G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 574 VSVDVPD 594 V + +PD Sbjct: 366 VDIGIPD 372
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 156 bits (395), Expect = 4e-38 Identities = 72/176 (40%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 648 Score = 147 bits (370), Expect = 3e-35 Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 574 VSVDVPD 594 V + +PD Sbjct: 366 VDIGIPD 372
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 5e-38 Identities = 76/175 (43%), Positives = 111/175 (63%), Gaps = 1/175 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A+E+ P IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) Length = 805 Score = 155 bits (393), Expect = 6e-38 Identities = 72/176 (40%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 594 GGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649 Score = 147 bits (370), Expect = 3e-35 Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 310 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366 Query: 574 VSVDVPD 594 V + +PD Sbjct: 367 VDIGIPD 373
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 155 bits (393), Expect = 6e-38 Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Frame = +1 Query: 16 PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 192 P F +++ T+ DV G+D+ ++ +E + +K+ ++F +G R PKG L Sbjct: 160 PSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGAL 219 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 + GPPGTGKTLLA+A A + F ++ + V+M++G GA VRD F AKE AP I+F Sbjct: 220 MYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIF 279 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 552 +DE+DA+ + E ++T+ +LL ++DGF + + V+AATNR D+LD ALLR Sbjct: 280 IDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLR 339 Query: 553 PGRFDRQVSVDVP 591 GR DR++ +P Sbjct: 340 SGRLDRKIEFPLP 352
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 155 bits (392), Expect = 8e-38 Identities = 75/177 (42%), Positives = 112/177 (63%), Gaps = 2/177 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX-XXXXXXXX 423 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 653 Score = 148 bits (373), Expect = 1e-35 Identities = 78/177 (44%), Positives = 113/177 (63%), Gaps = 2/177 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 427 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 155 bits (392), Expect = 8e-38 Identities = 71/176 (40%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G+++ K++ ++V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 648 Score = 147 bits (370), Expect = 3e-35 Identities = 77/187 (41%), Positives = 114/187 (60%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 574 VSVDVPD 594 V + +PD Sbjct: 366 VDIGIPD 372
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 155 bits (391), Expect = 1e-37 Identities = 78/183 (42%), Positives = 118/183 (64%), Gaps = 1/183 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F PN VT+ D+ +++ +++ M ++ ++ P++F A+G P GVLL GPPG GKT Sbjct: 572 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V Sbjct: 690 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746 Query: 583 DVP 591 +P Sbjct: 747 GLP 749 Score = 135 bits (341), Expect = 7e-32 Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 8/196 (4%) Frame = +1 Query: 31 QSKAK-----FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLL 195 Q KAK FQ+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL Sbjct: 247 QKKAKARGLEFQI---SNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLL 303 Query: 196 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 375 GPPG GKTLLA AIAGE +P ++ E V G ++R+LF++A NAPCI+F+ Sbjct: 304 HGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFI 363 Query: 376 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSAL 546 DEIDA+ D + + QLLT MD ++V+ ATNR D LD AL Sbjct: 364 DEIDAI---TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPAL 420 Query: 547 LRPGRFDRQVSVDVPD 594 R GRFDR++ + +PD Sbjct: 421 RRAGRFDREICLGIPD 436
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 155 bits (391), Expect = 1e-37 Identities = 74/180 (41%), Positives = 111/180 (61%), Gaps = 1/180 (0%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 477 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 535 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGS 594 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 595 VGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654 Score = 145 bits (367), Expect = 7e-35 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E V +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F + ++N+P I+F+DEIDA+ Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + ++ ++QLLT MDG + ++V+AATNR + +D AL R GRFDR+ Sbjct: 315 ---APKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371 Query: 574 VSVDVPD 594 + + +PD Sbjct: 372 IDIGIPD 378
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 154 bits (388), Expect = 2e-37 Identities = 78/185 (42%), Positives = 113/185 (61%), Gaps = 1/185 (0%) Frame = +1 Query: 43 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGK 219 K E +++ DV G+ E ++ EVVE L PE F VG PKG LL GPPGTGK Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197 Query: 220 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX 399 TLLA+A+A + F + S V+ ++G A +R++F A+++ PCIVF+DEIDA+ Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257 Query: 400 XXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVS 579 + E ++TL +LL ++DGF+ + V+ ATNR D LD ALLRPGR DR++ Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317 Query: 580 VDVPD 594 + +P+ Sbjct: 318 IGLPN 322
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 153 bits (387), Expect = 3e-37 Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 1/177 (0%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G+D Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A Sbjct: 191 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANS 250 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR+LF+ A E +P IVF+DEIDAV Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGE 310 Query: 430 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 E ++T+ +LL ++DGF+ + V+ ATNR + LD ALLRPGR DR++ +PD++ Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 367
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 153 bits (386), Expect = 4e-37 Identities = 77/176 (43%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++E K++ E V+ + E+F G KGVL GPPGTGKTLLAKAIA Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G S VRD+F KA+ APC+VF+DE+D++ Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ +NQLLTEMDG + V+ ATNR D +D AL+RPGR D+ + V +PD Sbjct: 614 GG-GDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPD 668 Score = 146 bits (368), Expect = 5e-35 Identities = 72/176 (40%), Positives = 111/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G E+VE L+ P+ F ++G + P+G+L+ GPPGTGKTL+A+A+A Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E G FF I+G E + G S +R F++A++N+P I+F+DEID++ Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSI---APKREKTN 337 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V V +PD Sbjct: 338 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPD 393
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 152 bits (385), Expect = 6e-37 Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 152 bits (385), Expect = 6e-37 Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 152 bits (385), Expect = 6e-37 Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 152 bits (383), Expect = 9e-37 Identities = 76/178 (42%), Positives = 110/178 (61%), Gaps = 1/178 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT++D+ G++E K+ E + + L+ + + KG+LL GPPG GKTLLAKAIA Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E F S+ G E + M+ G + VRDLF KA+ +PCI+F DEID++ Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSL--AKERNSNTN 1048 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 ND ++ +NQ+LTE+DG I ++AATNR DILD AL RPGR D+ + + +PD++ Sbjct: 1049 NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106 Score = 150 bits (380), Expect = 2e-36 Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 E N +T++D+ G+ + E++E LK PE F ++G PKGVL+ G PGTGKT +A Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578 Query: 232 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 411 KAIA E+ + I+G E + +G ++R +FKKA E PCI+F+DEID++ Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI---ANK 635 Query: 412 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 N+ ++ ++QLLT MDG + N ++V+AATNR + +D AL R GRFDR++ + VP Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695 Query: 592 D 594 D Sbjct: 696 D 696
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 152 bits (383), Expect = 9e-37 Identities = 76/183 (41%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Frame = +1 Query: 46 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 222 F PN VT+ D+ +++ + + M ++ ++ P++F +G P G+LL GPPG GKT Sbjct: 571 FVTVPN--VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKT 628 Query: 223 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 402 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688 Query: 403 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745 Query: 583 DVP 591 +P Sbjct: 746 GLP 748 Score = 136 bits (343), Expect = 4e-32 Identities = 77/191 (40%), Positives = 109/191 (57%), Gaps = 3/191 (1%) Frame = +1 Query: 31 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 210 ++KA+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL GPPG Sbjct: 248 KAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPG 307 Query: 211 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 390 GKTLLA AIAGE +P ++ E V G ++R+LF +A NAPCIVF+DEIDA Sbjct: 308 CGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDA 367 Query: 391 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSALLRPGR 561 + D + + QLLT MD ++V+ ATNR D LD AL R GR Sbjct: 368 I---TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 424 Query: 562 FDRQVSVDVPD 594 FDR+V + +PD Sbjct: 425 FDREVCLGIPD 435
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 150 bits (380), Expect = 2e-36 Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 8/195 (4%) Frame = +1 Query: 34 SKAKFQMEPNTG------VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 192 SKA+ + + G VT+DD+ G+D K + ++ ++ LK PE FT+ G + G+L Sbjct: 711 SKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGIL 769 Query: 193 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 372 GPPGTGKTL+AKAIA + FFS+ G E + M++G + VR +F+KA+E PC++F Sbjct: 770 FYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIF 829 Query: 373 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALL 549 DEID+V ++ ++QLL E+DG + G+ V+ ATNR D+LD ALL Sbjct: 830 FDEIDSV-APKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALL 888 Query: 550 RPGRFDRQVSVDVPD 594 RPGRFD+ + + +PD Sbjct: 889 RPGRFDKLLYLGIPD 903
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 150 bits (378), Expect = 4e-36 Identities = 74/181 (40%), Positives = 111/181 (61%), Gaps = 2/181 (1%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 478 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 535 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXX 411 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595 Query: 412 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +P Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 655 Query: 592 D 594 D Sbjct: 656 D 656 Score = 148 bits (373), Expect = 1e-35 Identities = 78/188 (41%), Positives = 118/188 (62%), Gaps = 2/188 (1%) Frame = +1 Query: 37 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 213 K + + E + +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255 Query: 214 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 GKTL+A+A+A E G FF I+G E + G S +R F++ ++N P I+F+DEIDA+ Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315 Query: 394 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 570 N E E+ + +QLLT MDG +G + ++V+AATNR + +D AL R GRFDR Sbjct: 316 ----APKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371 Query: 571 QVSVDVPD 594 ++ + +PD Sbjct: 372 EIDIGIPD 379
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 149 bits (377), Expect = 5e-36 Identities = 75/184 (40%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +M+ + ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTL Sbjct: 172 KMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 231 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A + F I GSE ++ ++G G R +FK A ENAP IVF+DEIDA+ Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR 291 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 E ++T+ +LL ++DGF+ + V+ ATN+ + LD AL+RPGR DR++ + Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFE 351 Query: 586 VPDV 597 PD+ Sbjct: 352 NPDL 355
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 149 bits (376), Expect = 6e-36 Identities = 76/177 (42%), Positives = 113/177 (63%), Gaps = 2/177 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DD+ G+D K + M+ ++ LK PE F++ G + G+L GPPGTGKTLLAKAIA Sbjct: 699 VTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIAS 757 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 758 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 816 Query: 427 NDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 817 GGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISD 873
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 146 bits (369), Expect = 4e-35 Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 4/179 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++DV G+D K + ++ +E LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 810 VKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIAT 868 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 869 NFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 927 Query: 427 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG EG G+ VV ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 928 GGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIAD 986
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 146 bits (369), Expect = 4e-35 Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 2/179 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ K ME ++ LK PE F + G + G+L GPPGTGKTLLAKAIA Sbjct: 715 VTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIAT 773 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 774 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSV-APKRGNQGDS 832 Query: 427 NDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 ++ ++QLL E+DG + G+ ++ ATNR D+LD ALLRPGRFD+ + + + D R Sbjct: 833 GGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTR 891
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 145 bits (367), Expect = 7e-35 Identities = 68/174 (39%), Positives = 110/174 (63%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + D+ G+ + ++ E + +++ ++F +G + PKG L+ GPPGTGKTLLA+A A ++ Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS 243 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 F ++ + V+MF+G GA VRD F AKE +P I+F+DE+DA+ + Sbjct: 244 NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDR 303 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF + + V+AATNR D LD ALLR GR DR++ +P+ Sbjct: 304 EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPN 357
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 145 bits (367), Expect = 7e-35 Identities = 75/176 (42%), Positives = 110/176 (62%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G+ +AK +E +E+ K F++ R+ G+LL G PG GKTLLA A+A Sbjct: 796 VRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAA 855 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + G+ F SI G E + ++G VR+LF++A+ PCI+F DE D++ Sbjct: 856 QCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 915 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 D + +NQ+LT+MDG EG G+ V+AAT+R D++DSALLRPGR D+ V D+PD Sbjct: 916 TD---RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPD 968
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 145 bits (365), Expect = 1e-34 Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 1/177 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V + D+ G +E K E+++ L+ E F +G PKGVLL GPPG KTL AKA+A Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+G+ F ++ G E +VG +R++F+KA+ AP I+F DEIDA+ Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA 632 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 L LL E+DG E G+++VAATNR D +D+ALLRPGR DR + V PDV Sbjct: 633 ---ANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDV 686 Score = 124 bits (312), Expect = 2e-28 Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Frame = +1 Query: 31 QSKAKFQM-EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGP 204 Q+ K+ + EP +++ V G+D+ + +E L +P F++ G P+G+LL GP Sbjct: 231 QANRKYNLPEP---LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGP 287 Query: 205 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 384 PGTGKT+L + +A + +I+G V ++G + +RD+F +A++ P I+F+DEI Sbjct: 288 PGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEI 347 Query: 385 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRF 564 D++ + R + LLT MDG ++V+AATNR + +D AL RPGRF Sbjct: 348 DSIAPNRANDDSGEVESR--VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRF 405 Query: 565 DRQVSVDVPDV 597 D++V + +PDV Sbjct: 406 DQEVEIGIPDV 416
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 145 bits (365), Expect = 1e-34 Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 5/184 (2%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PN G +DDV G+ K +E ++ L++PE F A G + G+L GPPGTGKTLLAK Sbjct: 1025 PNVG--WDDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1081 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 AIA E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1082 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGN 1140 Query: 415 XXXXNDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 ++ ++QLL E+DG G + G+ V+ ATNR D+LD+ALLRPGRFD+ + + Sbjct: 1141 QGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYL 1200 Query: 583 DVPD 594 V D Sbjct: 1201 GVSD 1204
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 145 bits (365), Expect = 1e-34 Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 2/181 (1%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 PN G +DDV G++ K+D ++ +E K + + G + G+L GPPGTGKTLLAKA Sbjct: 714 PNVG--WDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKTLLAKA 771 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 417 IA + FFS+ G E + M++G + VR +F+KA++ PC+VF DE+D+V Sbjct: 772 IATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSV-APQRGNQ 830 Query: 418 XXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 831 GDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 890 Query: 592 D 594 D Sbjct: 891 D 891
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 145 bits (365), Expect = 1e-34 Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 5/180 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G++ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 991 VTWDDVGGLNNVKDAVTETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1050 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1108 Query: 427 NDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG G + G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1109 GGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1168
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 144 bits (364), Expect = 1e-34 Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 5/180 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 988 VTWDDVGGLGNVKDAITETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1047 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1105 Query: 427 NDEREQTLNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1106 GGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1165
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 143 bits (361), Expect = 3e-34 Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 2/176 (1%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTLLAKA+A + Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 F + GSE ++ ++G G VR LF A+E++P IVF+DEIDA+ Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAE 308 Query: 430 DEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++T+ +LL ++DGF+ I V+ ATNR LD AL+RPGR DR++ + PD Sbjct: 309 REIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPD 364
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 143 bits (361), Expect = 3e-34 Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 11/208 (5%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ E K++ +E ++ + Sbjct: 671 GFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPEL 730 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 731 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 789 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAAT 516 +A+ APCI+F DE+D++ ++ ++QLL E+DG + V+ AT Sbjct: 790 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 848 Query: 517 NRADILDSALLRPGRFDRQVSVDVPDVR 600 NR D+LD ALLRPGRFD+ V V + R Sbjct: 849 NRPDLLDPALLRPGRFDKLVFVGANEDR 876 Score = 42.7 bits (99), Expect = 8e-04 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG GKT + A G+ + S G ++++ +F +A+ P + Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 367 VFVDEIDAVXXXXXXXXXXXNDEREQ-TLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 + + +D + D R L LL D ++VVA T+RA L Sbjct: 526 LLLTAVDLL---GRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL 579
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 143 bits (360), Expect = 4e-34 Identities = 75/181 (41%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G+D K + M+ ++ LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 836 VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIAT 894 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 895 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 953 Query: 427 NDEREQTLNQLLTEMDGFEGNT-----GIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 954 GGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 1013 Query: 592 D 594 D Sbjct: 1014 D 1014
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 143 bits (360), Expect = 4e-34 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 4/179 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++DV G+D K + ++ ++ +K PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 816 VKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIAT 874 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 875 NFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSV-APKRGNQGDS 933 Query: 427 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG +G G+ VV ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 934 EGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSD 992
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 142 bits (358), Expect = 7e-34 Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+ +V + + + M +V+ +K+PE + VG P GVLL GPPG GKTLLAKA+A Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E+ F SI G E + +VG +R +F +A+ + PC++F DE+DA+ Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDAL---VPRRDTSL 646 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ + +N LLTE+DG GI V+ ATNR D++D A+LRPGR D+ + +++P+ Sbjct: 647 SESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPN 702 Score = 130 bits (328), Expect = 2e-30 Identities = 77/184 (41%), Positives = 106/184 (57%), Gaps = 5/184 (2%) Frame = +1 Query: 58 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 PN+ + + G+D+ ME++ + PE F + G P+GVLL GPPG GKT +A Sbjct: 200 PNSSLK--SLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+AGE VPF SIS V G ++RDLF +A+ APC+VF DEIDA+ Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317 Query: 415 XXXXNDEREQTLNQLLTEMD--GFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 582 + R + QLLT MD E G +I++ ATNR D LD+AL R GRFDR++ + Sbjct: 318 AQREMERR--IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICL 375 Query: 583 DVPD 594 +VP+ Sbjct: 376 NVPN 379
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 142 bits (358), Expect = 7e-34 Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 11/208 (5%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ + K++ +E ++ + Sbjct: 672 GFPLLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPEL 731 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 732 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 790 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAAT 516 +A+ APCI+F DE+D++ ++ ++QLL E+DG + V+ AT Sbjct: 791 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 849 Query: 517 NRADILDSALLRPGRFDRQVSVDVPDVR 600 NR D+LD ALLRPGRFD+ V V + R Sbjct: 850 NRPDLLDPALLRPGRFDKLVFVGASEDR 877 Score = 39.7 bits (91), Expect = 0.007 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 367 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 + + +D + D R TL LL + D ++VVA T+R L Sbjct: 527 LLLTAVDLL---GRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDL 580
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 142 bits (358), Expect = 7e-34 Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 11/208 (5%) Frame = +1 Query: 10 GFPL---GFGQSKAKFQMEPNTGV--------TFDDVAGVDEAKQDFMEVVEFLKKPERF 156 GFPL FGQ+ + Q + V ++ DV G+ + K++ +E ++ + Sbjct: 669 GFPLLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPEL 728 Query: 157 TAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 336 ++G R G+LL GPPGTGKTLLAKA+A E + F S+ G E + M+VG VR++F Sbjct: 729 LSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVF 787 Query: 337 KKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAAT 516 +A+ APCI+F DE+D++ ++ ++QLL E+DG + V+ AT Sbjct: 788 ARARAAAPCIIFFDELDSL-APSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGAT 846 Query: 517 NRADILDSALLRPGRFDRQVSVDVPDVR 600 NR D+LD ALLRPGRFD+ V V + R Sbjct: 847 NRPDLLDPALLRPGRFDKLVFVGASEDR 874 Score = 38.1 bits (87), Expect = 0.020 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 366 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 367 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 + + +D + D R TL LL + D ++VVA T+R L Sbjct: 526 LLLTALDLL---GRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDL 579
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 140 bits (354), Expect = 2e-33 Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 3/176 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DD+ G++EAK + ++ L+ PE F+ G + GVLL GPPGTGKTLLAKA+A Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E + F SI G E + M+VG + VR++F+KA+ ++PC++F DE+D++ Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG 770 Query: 427 NDEREQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 N ++ ++QLL E+D + N + V+ ATNR D+LD +LLRPGRFD+ V + + Sbjct: 771 N-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGI 825 Score = 37.4 bits (85), Expect = 0.034 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Frame = +1 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC-I 366 LL G P TGKT + +A P F+IS EF + +++ D+F + +PC I Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQNVVKSPCAI 484 Query: 367 VFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAAT 516 +FV ++D + +++ LL+++D + G +V T Sbjct: 485 IFVKDLDVLSISSDEGNIVPG---SKSIQILLSKIDLVKSPQGRYIVIGT 531
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 139 bits (351), Expect = 5e-33 Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER-FTAVGARIPKGVLLVGPPGTGKTL 225 ++ T + + D+ + AK +E +E+ K E F R+ G+LL G PG GKTL Sbjct: 687 KLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTL 746 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA A+A + G+ F S+ G E + F+G +R+LF++A+ PCI+F DE D++ Sbjct: 747 LASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKR 806 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 D + +NQLLT+MDG EG G+ ++AAT+R D++DSALLRPGR D+ V + Sbjct: 807 GHDSTGVTD---RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICN 863 Query: 586 VP 591 +P Sbjct: 864 IP 865
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 138 bits (347), Expect = 1e-32 Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 2/177 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V ++D+ G++ K + ++ ++ LK PE F A G + G+L GPPGTGKTLLAKA+A Sbjct: 720 VFWEDIGGLEMVKGEILDTIDMPLKFPELF-ASGMKKRSGILFYGPPGTGKTLLAKAVAT 778 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 + FFS+ G E + M++G + VR +F++A++ PC++F DE+D+V Sbjct: 779 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSV-APKRGNQGDS 837 Query: 427 NDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 838 GGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISD 894
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 137 bits (345), Expect = 2e-32 Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 1/174 (0%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 +D + G+ E +Q M+ ++ K PE F + R G+LL GPPGTGKTLLA IA E+ Sbjct: 839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898 Query: 253 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 432 + F S+ G E + ++G VRD+F +A+ PCI+F DE +++ D Sbjct: 899 RMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTD 958 Query: 433 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + +NQLLT++DG EG G+ V+AAT+R D++D ALLRPGR D+ V PD Sbjct: 959 ---RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPD 1009
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 136 bits (343), Expect = 4e-32 Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 1/176 (0%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V +DDV G+D + F +V +KKP+ + A G + G LL GPPG GKTL+AKA A Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 EAG F I G+E + +VG +R LF++A+ APC++F DE+DA+ Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV 644 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E+ LNQ L E+DG E + V+ ATNR D++D A LRPGRF + V +P+ Sbjct: 645 ---VERLLNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPN 696 Score = 136 bits (342), Expect = 5e-32 Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 15/197 (7%) Frame = +1 Query: 49 QMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 ++E G TF D G+ + + M V+ + PE F +G + P G+L GPPG GKT Sbjct: 223 EVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTK 282 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LA AIA EAGVPF+ IS +E + G +R+LF KA AP IVF+DEIDA+ Sbjct: 283 LANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---- 338 Query: 406 XXXXXXXNDERE---QTLNQLLTEMDGFEGNTG-----------IIVVAATNRADILDSA 543 N +RE + + QLLT MDG GN G ++V+ ATNR D LD A Sbjct: 339 --GSKRENQQREMEKRIVTQLLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPA 395 Query: 544 LLRPGRFDRQVSVDVPD 594 L R GRF+ ++++ PD Sbjct: 396 LRRSGRFETEIALTAPD 412
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 134 bits (337), Expect = 2e-31 Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 2/178 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 VT+DDV G+ + K+ + VE+ +K F +G +G+LL GPPG KT LAKA A Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXXXXXX 423 A FFS+S +E M+VG G + +R+ F++A+ +P I+F DE D V Sbjct: 343 AAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSN 402 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 + E+ L+ LLTEMDG E GI+V+AATNR +D+AL+RPGRFD + V PD+ Sbjct: 403 SSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDL 460 Score = 90.1 bits (222), Expect = 4e-18 Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 8/179 (4%) Frame = +1 Query: 82 DVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV 258 ++ G + A Q E++ F + P +G + P+G+LL GPPGTGKT L +A+ E Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 259 PFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXX 426 +S G +R+ F +A +A P ++F+DEID + Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVL----CPRRDAR 138 Query: 427 NDEREQTLNQLLTEMDGFEGNTG---IIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ + +QL T MD + ++ ++VVA+TNR D +D AL R GRFD V V P+ Sbjct: 139 REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPN 197
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 124 bits (312), Expect = 2e-28 Identities = 63/173 (36%), Positives = 103/173 (59%) Frame = +1 Query: 76 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 255 F ++ G +EAK+ ++++L+ P+ F G PK VL GPPGTGKTL+A+A+A E Sbjct: 123 FSEIIGQEEAKKKCRIIMKYLENPKLF---GEWAPKNVLFYGPPGTGKTLMARALATETN 179 Query: 256 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 435 F + E + VG + +R+L+++A E+APCIVF+DE+DA+ + Sbjct: 180 SSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAI--GLSREYQSLRGD 237 Query: 436 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + +N LLTE+DG + N G++ +AATN +LD A+ RF+ ++ +P+ Sbjct: 238 VSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPN 288
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 124 bits (311), Expect = 2e-28 Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 18/192 (9%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 +TF D+ G++ KQ+ + V FL K + ++ P G L GPPGTGKTL+AKA++ E Sbjct: 346 ITFRDIGGMESLKQE-LATVAFLLKQKNYSN---SYPMGYLFAGPPGTGKTLMAKAMSYE 401 Query: 250 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 429 A P+ + GS+F GV +RV DLFK+ + +PCI+++DEID++ Sbjct: 402 AETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLE 461 Query: 430 DER------------------EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 555 + + L Q L MDG++ +I++ ATNR + LD A++RP Sbjct: 462 QLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRP 521 Query: 556 GRFDRQVSVDVP 591 GRFDRQ+ P Sbjct: 522 GRFDRQIVFSPP 533
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 122 bits (307), Expect = 6e-28 Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 4/185 (2%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ T V FDD+AG D AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 333 VDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 390 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 391 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 447 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 579 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 448 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 505 Query: 580 VDVPD 594 V +P+ Sbjct: 506 VSLPN 510
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 122 bits (307), Expect = 6e-28 Identities = 63/180 (35%), Positives = 104/180 (57%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 E + +T DDV G ++AK ++++L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVRSSITMDDVIGQEDAKIKCRIIMKYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 + + +N LLTEMDG N G++ + ATN ++LD A+ RF+ ++ +PD Sbjct: 234 YQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPD 291
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 121 bits (303), Expect = 2e-27 Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 4/185 (2%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ T V FDD+AG + AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 331 VDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 388 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 389 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 445 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 579 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 446 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 503 Query: 580 VDVPD 594 V +P+ Sbjct: 504 VSLPN 508
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 121 bits (303), Expect = 2e-27 Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 6/183 (3%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 246 V FDD+ G+D E+V L PE + P+GVL GPPGTGKTL+A+A+A Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469 Query: 247 -----EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 411 E + FF G++ + +VG ++R LF++AK++ P I+F DEID + Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSS 529 Query: 412 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 + ++ LL MDG + +IV+ ATNR D +D AL RPGRFDR+ +P Sbjct: 530 KQEQIH---ASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLP 586 Query: 592 DVR 600 DV+ Sbjct: 587 DVK 589
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 121 bits (303), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHK-ELYREYALRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 528 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 529 ILDSALLRPGRFDRQVSVDVPD 594 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 120 bits (302), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 528 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 529 ILDSALLRPGRFDRQVSVDVPD 594 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 120 bits (302), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 225 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 226 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 357 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 358 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 528 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 529 ILDSALLRPGRFDRQVSVDVPD 594 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 120 bits (300), Expect = 4e-27 Identities = 62/179 (34%), Positives = 103/179 (57%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 234 E + +T DDV G ++AK ++ +L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVKSDITMDDVIGQEDAKIKCRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 + + +N LLTEMDG N G++ + ATN ++LD+A+ RF+ ++ +P Sbjct: 234 FQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLP 290
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 120 bits (300), Expect = 4e-27 Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 6/188 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M ++ V FD V G+ Q EVV F + PE F PKGV+ GPPGTGKTL+ Sbjct: 382 MSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441 Query: 229 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A E V FF G++ + +VG ++R LF +A P I+F DEID + Sbjct: 442 ARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGL 501 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + ++ LL MDG +G ++V+ ATNR D LD AL RPGRFDR+ Sbjct: 502 APVRSSKQDQIH---ASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRE 558 Query: 574 VSVDVPDV 597 + +PD+ Sbjct: 559 LRFSLPDL 566
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 116 bits (290), Expect = 6e-26 Identities = 72/187 (38%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ +T V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 72 MQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 131 Query: 229 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 132 ARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGL 191 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 192 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 248 Query: 574 VSVDVPD 594 +PD Sbjct: 249 FLFSLPD 255
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 115 bits (289), Expect = 7e-26 Identities = 75/191 (39%), Positives = 113/191 (59%), Gaps = 3/191 (1%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPP 207 S A +PN V ++DVAG++ AK+ E V +K P F G R P G+LL GPP Sbjct: 120 SSAILSEKPN--VKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPP 175 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGK+ LAKA+A EA FFS+S S+ V ++G V+ LF A+EN P I+F+DE+D Sbjct: 176 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVD 235 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRF 564 A+ ++ + +LL +M+G ++ G++V+ ATN LDSA+ R RF Sbjct: 236 AL---TGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RF 290 Query: 565 DRQVSVDVPDV 597 +R++ + +PD+ Sbjct: 291 ERRIYIPLPDL 301
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 115 bits (288), Expect = 1e-25 Identities = 70/182 (38%), Positives = 111/182 (60%), Gaps = 2/182 (1%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 +PN V +DD+AG++ AK+ E V +K P+ F+ G + G+LL GPPGTGK+ LA Sbjct: 123 KPN--VRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLA 179 Query: 232 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 411 KA+A EAG FFSIS S+ V ++G VR LF+ A+E P I+F+DEID++ Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL---CGS 236 Query: 412 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 588 ++ + + L +M+G + +G++V+ ATN LDSA+ R RF++++ + + Sbjct: 237 RSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPL 294 Query: 589 PD 594 P+ Sbjct: 295 PN 296
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 114 bits (286), Expect = 2e-25 Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 248 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 307 Query: 229 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 308 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 367 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 368 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDRE 424 Query: 574 VSVDVPD 594 +PD Sbjct: 425 FLFSLPD 431
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 114 bits (285), Expect = 2e-25 Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 6/187 (3%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 228 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 417 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 476 Query: 229 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 477 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 536 Query: 394 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 573 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 537 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 593 Query: 574 VSVDVPD 594 +PD Sbjct: 594 FLFSLPD 600
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 112 bits (279), Expect = 1e-24 Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 4/179 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 244 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 420 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 421 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPE 302
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 112 bits (279), Expect = 1e-24 Identities = 72/179 (40%), Positives = 108/179 (60%), Gaps = 4/179 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 244 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 420 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 421 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPE 302
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 106 bits (264), Expect = 6e-23 Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 11/192 (5%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ GV +DDVAG+ EAK+ E V L PE F G R P KGVL+ GPPGTGKTL Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTL 287 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E G FF++S + + G VR LF A+ AP +F+DEID++ Sbjct: 288 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG---------IIVVAATNRADILDSALLRPG 558 + R + ++LL ++DG NT ++V+AATN +D AL R Sbjct: 348 GGSGEHESSRRVK--SELLVQVDGV-SNTATNEDGSRKIVMVLAATNFPWDIDEALRR-- 402 Query: 559 RFDRQVSVDVPD 594 R ++++ + +PD Sbjct: 403 RLEKRIYIPLPD 414
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 106 bits (264), Expect = 6e-23 Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 228 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 229 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 583 DVPD 594 +P+ Sbjct: 292 PLPE 295
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 106 bits (264), Expect = 6e-23 Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 4/184 (2%) Frame = +1 Query: 55 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 228 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 229 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 583 DVPD 594 +P+ Sbjct: 292 PLPE 295
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 106 bits (264), Expect = 6e-23 Identities = 69/191 (36%), Positives = 108/191 (56%), Gaps = 9/191 (4%) Frame = +1 Query: 52 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 225 ++ N V + D+AG+ EAK+ E V L P+ F G R P KGVL+VGPPGTGKT+ Sbjct: 225 VQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPPGTGKTM 282 Query: 226 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 405 LAKA+A E G FF++S + + G VR LF+ A+ AP +F+DEID++ Sbjct: 283 LAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSI--CS 340 Query: 406 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRF 564 ++ + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 341 KRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RL 398 Query: 565 DRQVSVDVPDV 597 ++++ + +P++ Sbjct: 399 EKRIYIPLPEI 409
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 105 bits (261), Expect = 1e-22 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 183 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 240 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 241 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 300 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVV 507 P +F+DEID++ +DE E + ++LL +MDG G + ++V+ Sbjct: 301 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVL 355 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVPDVR 600 AATN +D AL R R ++++ + +P + Sbjct: 356 AATNFPWDIDEALRR--RLEKRIYIPLPTAK 384
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 105 bits (261), Expect = 1e-22 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 181 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVV 507 P +F+DEID++ +DE E + ++LL +MDG G + ++V+ Sbjct: 299 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVL 353 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVPDVR 600 AATN +D AL R R ++++ + +P + Sbjct: 354 AATNFPWDIDEALRR--RLEKRIYIPLPTAK 382
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 105 bits (261), Expect = 1e-22 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + P+ F G R P Sbjct: 181 GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKT+LAKA+A E G FF++S S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVV 507 P +F+DEID++ +DE E + ++LL +MDG G + ++V+ Sbjct: 299 PTTIFIDEIDSI-----CSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVL 353 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVPDVR 600 AATN +D AL R R ++++ + +P + Sbjct: 354 AATNFPWDIDEALRR--RLEKRIYIPLPTAK 382
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 104 bits (260), Expect = 2e-22 Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 9/208 (4%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N + +DD+A ++EAK+ E V + PE F G R P Sbjct: 181 GSGYDKDLIEALERDIISQNPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRP 238 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKTLLAKA+A E FF+IS S + G VR LF+ A+ A Sbjct: 239 WKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYA 298 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAAT 516 P +F+DEID++ R + +LL +MDG G + ++V+AAT Sbjct: 299 PTTIFIDEIDSICSRRGTSEEHEASRRVKA--ELLVQMDGVGGASENEDPSKMVMVLAAT 356 Query: 517 NRADILDSALLRPGRFDRQVSVDVPDVR 600 N +D AL R R ++++ + +P + Sbjct: 357 NFPWDIDEALRR--RLEKRIYIPLPSAK 382
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 102 bits (253), Expect = 1e-21 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Frame = +1 Query: 34 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVV--EFLKKPERFTAVGARIPKGVLLVGPP 207 S+ K + P+ + + G+D QD + PE + + KG+LL GPP Sbjct: 260 SRRKQIINPDFKLEDLGIGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPP 319 Query: 208 GTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAP 360 GTGKTL+A+ ++ G ++G E + +VG +R+LFK K +++ Sbjct: 320 GTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDL 379 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 540 ++ DE+D+V + +NQLL++MDG + I+V+ TNR D++D+ Sbjct: 380 HVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDT 439 Query: 541 ALLRPGRFDRQVSVDVPD 594 ALLRPGRF+ Q+ + +PD Sbjct: 440 ALLRPGRFEIQIEISLPD 457 Score = 38.9 bits (89), Expect = 0.012 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = +1 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASR----VRDLFKKAK 348 + +LL GPPG GKT +A +A + PF + + E VG+G R + ++F+ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVH 650 Query: 349 ENAPCIVFVDEIDAV 393 ++ ++ +D+I+ + Sbjct: 651 KSPLNVLVIDKIENI 665
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 102 bits (253), Expect = 1e-21 Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 9/189 (4%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 234 N V +DD+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 415 XXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQ 573 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 574 VSVDVPDVR 600 + + +P + Sbjct: 377 IYIPLPSAK 385
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 100 bits (249), Expect = 3e-21 Identities = 61/160 (38%), Positives = 88/160 (55%), Gaps = 10/160 (6%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 P +G KG+LL GPPGTGKTL+A+ I A P ++G E + +VG Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEE 321 Query: 319 RVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 +R+LFK K +E++ I+ DE+D+V + +NQLL +MD Sbjct: 322 NIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMD 380 Query: 475 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 G + I+V+ TNR D++DSALLRPGRF+ QV + +PD Sbjct: 381 GVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPD 420 Score = 36.6 bits (83), Expect = 0.057 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 +L+ GP G+GKT LA IA ++G PF IS +E M + + + F+ A ++ Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 364 IVFVDEIDAV 393 I+ +D ++ + Sbjct: 620 ILVIDSLETL 629
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 100 bits (248), Expect = 4e-21 Identities = 59/159 (37%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASR 321 P + +G + KG+LL GPPGTGKTL+A+ I G ++G E + FVG Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 322 VRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 477 VRDLF A+++ ++ DEIDA+ + +NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDG 357 Query: 478 FEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 E ++++ TNR D+LD ALLRPGR + QV + +PD Sbjct: 358 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPD 396 Score = 35.0 bits (79), Expect = 0.17 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +1 Query: 190 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE-FVEMFVGVGASRVRDLFKKAKENAPCI 366 LL GP G+GKT LA I ++ P+ I +E + + + + +F+ A ++ I Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 367 VFVDEID 387 + +D+I+ Sbjct: 594 IILDDIE 600
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 100 bits (248), Expect = 4e-21 Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 10/160 (6%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + +G+LL GPPGTGKTL+A+ I A P ++G + ++ +VG S Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESES 377 Query: 319 RVRDLFKKAKEN-APC-------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 VR LF A+E C I+ DEIDA+ + + +NQLL++MD Sbjct: 378 NVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSS-VHDTVVNQLLSKMD 436 Query: 475 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 G E I+V+ TNR D++D ALLRPGR + Q+ V +PD Sbjct: 437 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPD 476 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 V+L G TGKT LA +A + PF IS + V ++ F+ AK + Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 364 IVFVDEID 387 ++ +D ++ Sbjct: 676 VLLIDNLE 683
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 99.4 bits (246), Expect = 7e-21 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Frame = +1 Query: 4 GPGFPLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP 180 G G+ ++ + + N V + D+A + EAK+ E V + PE F G R P Sbjct: 184 GTGYDKDLVEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRP 241 Query: 181 -KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 357 KGVL+VGPPGTGKTLLAKA+A E FF++S S + G VR LF+ A+ + Sbjct: 242 WKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYS 301 Query: 358 PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAAT 516 P +F+DEID++ R + +LL +MDG G + ++V+AAT Sbjct: 302 PATIFIDEIDSICSRRGTSEEHEASRRMKA--ELLVQMDGVGGASENDDPSKMVMVLAAT 359 Query: 517 NRADILDSALLRPGRFDRQVSVDVPDVR 600 N +D AL R R ++++ + +P + Sbjct: 360 NFPWDIDEALRR--RLEKRIYIPLPSAK 385
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 99.0 bits (245), Expect = 9e-21 Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 22/197 (11%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V +DD+AG++ AK E V + +P+ F G R P +G+LL GPPGTGKT+LA+A+A Sbjct: 602 VHWDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVA 659 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+ FFSIS S ++G VR LF AK+ +P I+FVDEID++ Sbjct: 660 TESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI--MGSRNNEN 717 Query: 424 XNDEREQTLNQLL--------------------TEMDGFEGNTGIIVVAATNRADILDSA 543 N+ + N+ L ++ +G E +T ++V+AATN +D A Sbjct: 718 ENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEA 777 Query: 544 LLRPGRFDRQVSVDVPD 594 R RF R+ + +P+ Sbjct: 778 ARR--RFVRRQYIPLPE 792
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 99.0 bits (245), Expect = 9e-21 Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 5/170 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFT-AVGARIPKGVLLVGPPGTGKTLLAKAIA 243 +TF D+ G+D D E V + L PE ++ + + P GVLL GPPG GKT+LAKA+A Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALA 147 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+G F SI S ++ + G V +F A + PCI+F+DEID+ Sbjct: 148 KESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDS----FLRERSS 203 Query: 424 XNDEREQTLN-QLLTEMDGFEGNTGIIVVAATNRADILDSALLR--PGRF 564 + E TL + +T DG N ++++ ATNR + +D A LR P RF Sbjct: 204 TDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRF 253
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 98.2 bits (243), Expect = 2e-20 Identities = 64/189 (33%), Positives = 99/189 (52%), Gaps = 14/189 (7%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 V ++D+AG+ AK E V + +P+ F G R P +G+LL GPPGTGKT++AKA+A Sbjct: 468 VYWEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVA 525 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+ FFS+S S + ++G VR LF AK+ +P I+F+DEID++ Sbjct: 526 TESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSM---LTARSDN 582 Query: 424 XNDEREQTLNQLLTEMDGFEGNTG------------IIVVAATNRADILDSALLRPGRFD 567 N+ + +LL + T ++V+ ATN +D A R RF Sbjct: 583 ENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFS 640 Query: 568 RQVSVDVPD 594 R++ + +PD Sbjct: 641 RKLYIPLPD 649
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 98.2 bits (243), Expect = 2e-20 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 9/189 (4%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 234 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 235 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 414 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 415 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 573 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 574 VSVDVPDVR 600 + + +P + Sbjct: 377 IYIPLPSAK 385
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 98.2 bits (243), Expect = 2e-20 Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 5/181 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 243 ++ DD+ G+ + KQ E V L PE F G R P K ++L GPPGTGKTL+A+AIA Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIA 247 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 E+ FF++S ++ + G VR LF+ A+ AP I+F+DEID + Sbjct: 248 SESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTL--GGQRGNSG 305 Query: 424 XNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ + ++ L +MDG + + + V+AATN LD AL R RF++++ + +PD Sbjct: 306 EHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPD 363 Query: 595 V 597 + Sbjct: 364 I 364
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 96.7 bits (239), Expect = 5e-20 Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 10/160 (6%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 300 Query: 319 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 VR LF +A+E I+ DEIDA+ + +NQLLT++D Sbjct: 301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSG-VHDTVVNQLLTKID 359 Query: 475 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 G + I+V+ TNR D++D ALLRPGR + Q+ + +P+ Sbjct: 360 GVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPN 399 Score = 35.0 bits (79), Expect = 0.17 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +1 Query: 88 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 267 A V +D M V+ K PE V VL+ G P +GKT LA +A + PF Sbjct: 512 APVSNLLEDGMLYVQQAKAPESSGLVS------VLVAGAPNSGKTALAAQLAKMSDFPFV 565 Query: 268 SI-SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 + S + V +R +F A + + VD ++ Sbjct: 566 KVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVE 606
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 95.5 bits (236), Expect = 1e-19 Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 10/160 (6%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 318 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 305 Query: 319 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 +R LF +A+E I+ DEIDA+ + +NQLL ++D Sbjct: 306 NIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSG-VHDTVVNQLLAKID 364 Query: 475 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 G E I+V+ TNR D++D ALLRPGR + Q+ + +P+ Sbjct: 365 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPN 404 Score = 30.4 bits (67), Expect = 4.1 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +1 Query: 94 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 273 V E +D M V+ K E V VL+ G P +GK+ LA +A + PF + Sbjct: 519 VTELLEDGMLSVQQAKATESSGLVS------VLIEGAPNSGKSALAANLAQLSDFPFVKV 572 Query: 274 -SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 S + V +R +F A + + VD ++ Sbjct: 573 CSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVE 611
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 94.7 bits (234), Expect = 2e-19 Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 13/163 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 309 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 310 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 465 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 466 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPD 399 Score = 37.7 bits (86), Expect = 0.026 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT +A IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 94.7 bits (234), Expect = 2e-19 Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 13/163 (7%) Frame = +1 Query: 145 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 309 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 310 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 465 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 466 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPD 399 Score = 38.9 bits (89), Expect = 0.012 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 94.4 bits (233), Expect = 2e-19 Identities = 54/152 (35%), Positives = 84/152 (55%) Frame = +1 Query: 28 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 207 G+ + F++ + F D+ G+ + + E+V FL+ R +P G+LL GPP Sbjct: 957 GERQTGFRVFLESRKKFTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPHGILLTGPP 1016 Query: 208 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 387 GTGKTLL +A+AGEA VP +SGS +E A +++ +F++A++ APCIVF+DEID Sbjct: 1017 GTGKTLLVQALAGEAQVPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEID 1075 Query: 388 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 483 + + +R Q L + GFE Sbjct: 1076 TL-----------SSKRSQLLQNPMANDPGFE 1096 Score = 67.4 bits (163), Expect = 3e-11 Identities = 36/94 (38%), Positives = 51/94 (54%) Frame = +1 Query: 310 GASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 489 GA + D FKK K+N N+++ L+QLL E+DG +G Sbjct: 1125 GAKKEFDNFKKQKKNP----------------AEYNSKQNEKQVSLLSQLLIELDGIQGR 1168 Query: 490 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 591 G+++ ATNR ++LD ALLRPGRFD+ V V +P Sbjct: 1169 NGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLP 1202
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 94.0 bits (232), Expect = 3e-19 Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 5/182 (2%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 240 +T+ D+AG+DE + + V L +R G+R+ PKGVLL GPPG GKTL+AKA Sbjct: 92 ITWHDIAGLDEVITELKDTV-ILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKAT 150 Query: 241 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 420 A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSS 207 Query: 421 XXNDEREQTLNQLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++ Q ++ DG + N +I++ ATNR LDSA+LR R + ++ P+ Sbjct: 208 SDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPN 265 Query: 595 VR 600 VR Sbjct: 266 VR 267
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 93.6 bits (231), Expect = 4e-19 Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 17/209 (8%) Frame = +1 Query: 19 LGFGQSKAKFQMEPNTGVTFDD--VAGVDEAKQD-FMEVVEF-LKKPERFTAVGARIPKG 186 +G ++K Q N F+ + G+D+ D F F + PE +G KG Sbjct: 196 IGKAKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKG 255 Query: 187 VLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 351 +LL GPPG GKTLLA+ I A E V ++G E + +VG + +R LF A+E Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGESEANIRKLFADAEE 311 Query: 352 --------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 507 + I+ DEIDA+ + +NQLL+++DG E I+V+ Sbjct: 312 EQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVI 370 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVPD 594 TNR D++D ALLRPGR + ++ + +PD Sbjct: 371 GMTNRPDLIDEALLRPGRLEVKMEIGLPD 399 Score = 38.9 bits (89), Expect = 0.012 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 363 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 534 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 93.6 bits (231), Expect = 4e-19 Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 15/191 (7%) Frame = +1 Query: 67 GVTFDDVAGVDEAKQDFMEV-----VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 231 G F+D+ G+ +F + L P +G KG+LL GPPGTGKTL+A Sbjct: 263 GFKFEDM-GIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIA 321 Query: 232 KAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--------ENAPCIVFVDE 381 + I A P ++G E + +VG VR LF A+ E+ I+ DE Sbjct: 322 RQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDE 380 Query: 382 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGR 561 +DA+ +Q +NQLL +MDG + I+V+ TNR D++D ALLRPGR Sbjct: 381 LDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGR 439 Query: 562 FDRQVSVDVPD 594 + + + +PD Sbjct: 440 LEVHMEISLPD 450 Score = 37.4 bits (85), Expect = 0.034 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +1 Query: 127 VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFV 303 V+ +K ER V VLL GP +GKT LA IA + PF +S V M Sbjct: 574 VQQVKNSERTRLVS------VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNE 627 Query: 304 GVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 + V +F+ + ++ ++ VDEI+ + Sbjct: 628 NARVAHVNRVFEDSYKSPLSVIVVDEIERI 657
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 93.2 bits (230), Expect = 5e-19 Identities = 43/58 (74%), Positives = 50/58 (86%) Frame = +1 Query: 427 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 600 +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+ Sbjct: 13 HDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVK 70
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 90.1 bits (222), Expect = 4e-18 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 1/181 (0%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 237 N D+ G++E K F K+ E + G IPKG+LLVG GTGK+L AK+ Sbjct: 238 NPVTKISDIGGLNELKSWLKFRAASFSKRAEEY---GLPIPKGLLLVGIQGTGKSLTAKS 294 Query: 238 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 417 IA E +P + +G +RVR + + A+ +PCI+++DEID Sbjct: 295 IANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNN 354 Query: 418 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 +R +T + E + + VVA N D L LLR GRFD + +PD+ Sbjct: 355 DSGTTKR--VFGTFITWLS--EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDL 410 Query: 598 R 600 + Sbjct: 411 K 411
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 564 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 564 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 228 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 564 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 89.0 bits (219), Expect = 1e-17 Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 3/164 (1%) Frame = +1 Query: 70 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 240 VT+ DVAG+DE + + V L +R G+++ PKGVLL GPPG GKTL+AKA Sbjct: 91 VTWRDVAGLDEIISEMQDTV-ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKAT 149 Query: 241 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 420 A +G F ++ S + + G +F A + PCI+F+DEID+ Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDH 209 Query: 421 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLR 552 + L +D E N+ ++V+ ATNR +D+A+LR Sbjct: 210 EATAMMKAQFMSLWDGLDTGE-NSQVMVMGATNRPQDVDAAILR 252
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 85.9 bits (211), Expect = 8e-17 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 5/185 (2%) Frame = +1 Query: 61 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARI---PKGVLLVGPPGTGKTLL 228 + G +D++ G +E E+ + + P RF + G+ + P+G+LL GPPG GKTLL Sbjct: 77 DVGADWDEIGGCEEL---VAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 133 Query: 229 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 408 AKA+A AG F ++ S + + G +F A++ P I+F+DEID+ Sbjct: 134 AKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDS---FLR 190 Query: 409 XXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVD 585 ++ Q +T DGF + IIV+ ATNR +D+A+LR R + V Sbjct: 191 DRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVP 248 Query: 586 VPDVR 600 VP+ + Sbjct: 249 VPNAK 253
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 9/181 (4%) Frame = +1 Query: 82 DVAGVDEAKQDFMEVVEFLKKPERFTAV-----GARIPKGVLLVGPPGTGKTLLAKAIAG 246 ++ GVD K ++LKK + + G P+G+LL+G GTGK+L AKAIA Sbjct: 229 NIGGVDNLK-------DWLKKRKTSFTIQASNYGLPTPRGLLLIGIQGTGKSLTAKAIAT 281 Query: 247 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 426 E +P + VG SR+R + A+ +PCI+++DE+D Sbjct: 282 EWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMD--------KAFSN 333 Query: 427 NDER--EQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ND R T N++L + E + VVA N D+L ++R GRFD +D+P+ Sbjct: 334 NDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPE 393 Query: 595 V 597 + Sbjct: 394 L 394
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 5/177 (2%) Frame = +1 Query: 79 DDVAGVDEAKQDFMEVVEFLKKPERFTA-----VGARIPKGVLLVGPPGTGKTLLAKAIA 243 +D+ G+D K +LKK R + G PKG+LLVG GTGK+L AKAIA Sbjct: 228 EDIGGLDALKS-------WLKKRSRSFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIA 280 Query: 244 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 423 + +P + + VG SR+R++ A+ +PC++++DEID Sbjct: 281 NDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDS 340 Query: 424 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 R +T + E T + VVA N L S +LR GRFD +D+P+ Sbjct: 341 GTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPN 393
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 77.0 bits (188), Expect = 4e-14 Identities = 47/157 (29%), Positives = 81/157 (51%) Frame = +1 Query: 124 VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 303 +V+ ++ + G ++ +L GPPG GKTL A+ A E G+P F + + ++ Sbjct: 100 LVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYL 159 Query: 304 GVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 483 G A+ +R F+ A++ PC++F DE DA+ ++E + +N LL +D + Sbjct: 160 GETATNIRKTFEFARKQ-PCVLFFDEFDAL--ARTRDDSGEHNELRRVVNSLLLFIDNMQ 216 Query: 484 GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 594 ++AATN LD+A+ R RFD + D P+ Sbjct: 217 PKG--FLIAATNLDRSLDAAIWR--RFDEVLWFDRPE 249
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 67.8 bits (164), Expect = 2e-11 Identities = 58/186 (31%), Positives = 89/186 (47%) Frame = +1 Query: 25 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGP 204 FGQ KAK +M P+ V D +G+ E D +V +F+K + ++ G +G LL GP Sbjct: 216 FGQPKAK-RMLPS--VILD--SGIKEGILD--DVYDFMKNGKWYSDRGIPYRRGYLLYGP 268 Query: 205 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 384 PG+GKT +A+AGE ++ SE + R+ L E + I+ +++I Sbjct: 269 PGSGKTSFIQALAGELDYNICILNLSE-----NNLTDDRLNHLMNNMPERS--ILLLEDI 321 Query: 385 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRF 564 DA T + LL +DG + I TN + LD+A++RPGR Sbjct: 322 DA-AFNKRSQTGEQGFHSSVTFSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRI 380 Query: 565 DRQVSV 582 D +V V Sbjct: 381 DYKVFV 386
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 7/156 (4%) Frame = +1 Query: 121 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 294 +V EF+ P+ +T G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 295 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 459 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPVKYQGLGRLTFSGL 312 Query: 460 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 62.8 bits (151), Expect = 7e-10 Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 4/188 (2%) Frame = +1 Query: 16 PLGFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLL 195 P GF + + P + V + +GV E D +V EF+ P+ +T G +G LL Sbjct: 178 PFGFPRRR-----RPLSSVVLE--SGVAERIVD--DVKEFIGNPKWYTDRGIPYRRGYLL 228 Query: 196 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 375 GPPG GK+ A+AGE G +S S+ + R+ L A + + I+ + Sbjct: 229 YGPPGCGKSSFITALAGELGYSICLMSLSD-----RSLSDDRLNHLLSVAPQQS--IILL 281 Query: 376 DEIDAVXXXX----XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 +++DA T + LL +DG + IV TN + LD A Sbjct: 282 EDVDAAFVSRELLPTENPLAYQGMGRLTFSGLLNALDGVASSEARIVFMTTNFIERLDPA 341 Query: 544 LLRPGRFD 567 L+RPGR D Sbjct: 342 LVRPGRVD 349
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 60.5 bits (145), Expect = 4e-09 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 5/154 (3%) Frame = +1 Query: 121 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 294 +V F++ P+ ++ G +G LL GPPG GK+ A+AGE + S+S S + Sbjct: 204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263 Query: 295 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX---XXXNDEREQTLNQLLT 465 R+ L A + + I+ ++++DA T + LL Sbjct: 264 -------DRLNHLLSVAPQQS--IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLN 314 Query: 466 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 +DG IV TN D LD AL+RPGR D Sbjct: 315 ALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 58.5 bits (140), Expect = 1e-08 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 7/156 (4%) Frame = +1 Query: 121 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 294 ++ EF+ P+ + G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 295 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 459 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPIKYQGLGRLTFSGL 312 Query: 460 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 567 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 58.5 bits (140), Expect = 1e-08 Identities = 42/149 (28%), Positives = 67/149 (44%) Frame = +1 Query: 121 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 300 +V +FL+ + + G +G LL GPPG+GKT A+AGE ++ +E Sbjct: 223 DVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE----- 277 Query: 301 VGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF 480 G+ R+ L A +V ++++D+ T + LL +DG Sbjct: 278 KGLTDDRLNHLLSNVPPKA--VVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGV 334 Query: 481 EGNTGIIVVAATNRADILDSALLRPGRFD 567 + I+ TN + LD AL+RPGR D Sbjct: 335 TSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 56.2 bits (134), Expect = 7e-08 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%) Frame = +1 Query: 166 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS-----------------GSEFVE 294 G+ + KG+LL+GP GTG++ L K++A ++ VP IS +EF + Sbjct: 1366 GSLLSKGILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEF-D 1424 Query: 295 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 FV + AK +PCI+++ I + + L+ L+ + Sbjct: 1425 PFVKDKMEDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLF 1484 Query: 475 GF-----EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 F + I+V+A+T+ +D AL+ P R DR +++ Sbjct: 1485 RFRDGEKDSMRNILVIASTHIPQRVDPALIAPNRLDRSINI 1525
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 56.2 bits (134), Expect = 7e-08 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Frame = +1 Query: 181 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGV---GASRVR 327 KG+LLVGP GK+ L K +A ++ VP IS S+ + E ++ + R+ Sbjct: 1652 KGILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLT 1711 Query: 328 DLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMDGFEGN 489 + + AK+ +PCI+++ +I + N E + T L TE + Sbjct: 1712 LILELAKKMSPCIIWIQDIHEL----NVNRSTENVESDPTFLLGILLKYFHTEFIS-KST 1766 Query: 490 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 597 GII++ +T+ +D AL+ P R D+ +++ + D+ Sbjct: 1767 KGIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDI 1802
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 53.5 bits (127), Expect = 5e-07 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 17/156 (10%) Frame = +1 Query: 166 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGVGASR 321 G KG+LL+GP TG++ L K +A E+ VP F IS ++ + E ++ + Sbjct: 1393 GLSYSKGILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIES 1452 Query: 322 VRDL---FKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMD 474 +R L AK+ +PCI+++ I + N E + T L T+ Sbjct: 1453 LRRLNLTLDFAKKMSPCIIWIQNIHQL----NVNRLTQNVESDPTFLLGILLKYFQTDFS 1508 Query: 475 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 582 + N IIV+ +T+ +D AL+ P R D+ ++V Sbjct: 1509 KTKKN-NIIVIGSTHLPKKVDPALISPNRLDKIINV 1543
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 50.4 bits (119), Expect = 4e-06 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%) Frame = +1 Query: 166 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV-----------------E 294 G+ KG+LL+GP GTG++ L K++A ++ VP IS + + Sbjct: 619 GSLFSKGILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFN 678 Query: 295 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 474 F F+ AK +PCI+++ I + + L LL + Sbjct: 679 TFWRDTIDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYIS 738 Query: 475 -GFEGNT--GIIVVAATNRADILDSALLRPGRFDRQVSV 582 G E ++ I+ +A+T+ +D AL+ P R D +++ Sbjct: 739 RGGEKDSIRNILFIASTHIPQRVDPALIAPNRLDSSINI 777
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 49.7 bits (117), Expect = 7e-06 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 1/136 (0%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK-ENAPC 363 +LL GPPGTGKTL AK +A +G+ + ++G + M G + + LF A Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKLFDWANTSRRGL 406 Query: 364 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 543 ++F+DE DA + + TLN L M + + ++V A+N + D A Sbjct: 407 LLFMDEADA--FLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCA 462 Query: 544 LLRPGRFDRQVSVDVP 591 + R D V D+P Sbjct: 463 I--NSRIDVMVHFDLP 476
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 49.3 bits (116), Expect = 9e-06 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Frame = +1 Query: 79 DDVAGVDEAKQDFMEVVEFL---KKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 249 +DV D+AK+ + + +KP++ + LL GPPG GKT L +AIA E Sbjct: 22 EDVVNQDQAKKILVPWFKAWLEGRKPDK---------RAALLYGPPGVGKTSLVEAIASE 72 Query: 250 AGVPFFSISGSEF-----VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 + ++ S++ +E VG ASR R +FK+ ++ +DE+D + Sbjct: 73 FNLEMIELNASDYRRRSDIERIVG-AASRKRSMFKRG-----VVILLDEVDGI 119
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 49.3 bits (116), Expect = 9e-06 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Frame = +1 Query: 151 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 330 R T + + +L+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 384 RNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 442 Query: 331 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 507 LF A ++FVDE DA +++ TLN L + + ++V Sbjct: 443 LFDWANTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLYRTG--QHSNKFMLV 498 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVP 591 A+N+ + D A+ R + V D+P Sbjct: 499 LASNQPEQFDWAI--NDRINEMVHFDLP 524
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 T D+V ++AKQ + V KK + K +LL GPPGTGKT A+A E Sbjct: 41 TLDEVENQEQAKQILRDYVINYKKKYK--------GKALLLYGPPGTGKTSSVYALANEL 92 Query: 253 GVPFFSISGSE-----FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 G ++ S+ + VG AS+ + LF K + I+ VDE+D + Sbjct: 93 GYEVLEVNASDERDAIHIHHIVG-EASKGKPLFHKGR-----IILVDEVDGL 138
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 48.9 bits (115), Expect = 1e-05 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = +1 Query: 73 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 252 + +DVAG ++ KQ +E +E + +G + K +LL GPPG+GKT LA AIA + Sbjct: 12 SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63 Query: 253 GVPFFSISGS-----EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 393 ++ S + + VG A+ K+ ++ +DE+D + Sbjct: 64 AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL 109
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +1 Query: 85 VAGVDEAKQDFMEVV---EFLKKPERFTAVGARIPKG-VLLVGPPGTGKTLLAKAIAGEA 252 V G D+AK+ F+ V + + ++ + G I K +++VGP GTGKTLLA+ IA Sbjct: 77 VIGQDDAKR-FLSVAVYNHYKRLLQQEDSDGVEIEKSNIIMVGPTGTGKTLLARTIAKML 135 Query: 253 GVPFFSISGSEFVEM-FVGVGASRVRDLFKKA-----KENAPCIVFVDEIDAVXXXXXXX 414 VPF + + E +VG + +A K+ IVF+DEID + Sbjct: 136 HVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVKQAERGIVFIDEIDKIARKSDNP 195 Query: 415 XXXXNDEREQTLNQLLTEMDG 477 + E LL ++G Sbjct: 196 SITRDVSGEGVQQGLLKLLEG 216
>HSLU_OCEIH (Q8CXH1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 465 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKA 345 +PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL + A Sbjct: 50 VPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVEMA 108
>Y1189_COXBU (P39918) Hypothetical protein CBU1189| Length = 440 Score = 47.8 bits (112), Expect = 2e-05 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--ENAP 360 ++L GPPG+GKT LA+ IA +AG SIS V G +RD+ ++A+ + Sbjct: 47 MILWGPPGSGKTTLAEIIAQKAGARVESISA-------VLAGVKDIRDVVERAERHKGQA 99 Query: 361 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN------TGIIVVAATNR 522 I+FVDE+ ++ TL TE F+ N T + V+ Sbjct: 100 TILFVDEVHGFNKSQQDAFLPHVEKGTITLIGATTENPSFQLNNALLSRTRVYVLKQLTE 159 Query: 523 AD---ILDSALLRPGRFDRQVSVDVPD 594 AD IL++AL R + ++++P+ Sbjct: 160 ADLLSILENALANEERGLGKKALEIPE 186
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 47.8 bits (112), Expect = 2e-05 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Frame = +1 Query: 151 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 330 R T + + VL+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 335 RNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 393 Query: 331 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 507 +F A ++FVDE DA +++ TLN L + ++ ++V Sbjct: 394 VFDWASTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLHRTG--QHSSKFMLV 449 Query: 508 AATNRADILDSALLRPGRFDRQVSVDVP 591 A+N+ + D A+ R D V +P Sbjct: 450 LASNQPEQFDWAI--NDRIDEMVCFALP 475
>HSLU_RHOPA (Q6ND03) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 433 Score = 47.4 bits (111), Expect = 3e-05 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Frame = +1 Query: 175 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGASR-VRDLFKKA 345 +PK +L++GP G GKT +A+ +A AG PF + ++F E+ +VG + +RDL + A Sbjct: 49 LPKNILMIGPTGVGKTEIARRLAKLAGAPFLKVEATKFTEVGYVGRDVEQIIRDLVEVA 107
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 15/136 (11%) Frame = +1 Query: 187 VLLVGPPGTGKTLLAKAIAGEAGVPFFS----------ISGSEFVEMFVGVG--ASRVRD 330 +LL GPPGTGKT L K +A + S S F + F G ++ D Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 331 LFKKAKENAPCIVFV--DEIDAVXXXXXXXXXXXN-DEREQTLNQLLTEMDGFEGNTGII 501 + E+ C+VFV DE++++ + + +N LLT++D ++ Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 502 VVAATNRADILDSALL 549 ++ +N LD AL+ Sbjct: 295 ILCTSNLESTLDKALV 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,629,300 Number of Sequences: 219361 Number of extensions: 1665070 Number of successful extensions: 11971 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 10370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11454 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
