ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalk10 |
|---|---|
| Clone Library Name | barley_pub |
>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 493 Score = 340 bits (872), Expect = 2e-93 Identities = 181/216 (83%), Positives = 185/216 (85%) Frame = +3 Query: 3 GAICRXAALFXXXCAKLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLD 182 G + AALF ++ + LVIFVMDGSIG VGAVIVTKLD Sbjct: 192 GRHMQEAALFEEM-RQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLD 250 Query: 183 GHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIV 362 GHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIV Sbjct: 251 GHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIV 310 Query: 363 PADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKE 542 PADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKE Sbjct: 311 PADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKE 370 Query: 543 KFKRYMTIMDSMTPAELDSTNPKLMTESRTIRVARG 650 KFKRYMTIMDSMTPAELDSTNPKLMTESR IRVARG Sbjct: 371 KFKRYMTIMDSMTPAELDSTNPKLMTESRIIRVARG 406
>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 497 Score = 295 bits (756), Expect(2) = 3e-81 Identities = 146/192 (76%), Positives = 165/192 (85%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMDGSIG VGAVI+TKLDGHAKGGGALSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEHID+F++F+V+PFV+RLLG GDL GL+DK++ ++PADQQ EL+AKL+EG FTLRLLYE Sbjct: 276 GEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYE 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQNLLKMGP+ Q+FSMLPGFSSELMPKG EK+ + K KRYMTIMDSMT AELDSTNPKL Sbjct: 336 QFQNLLKMGPIGQVFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKL 395 Query: 615 MTESRTIRVARG 650 MTESR IR+ARG Sbjct: 396 MTESRIIRIARG 407 Score = 26.6 bits (57), Expect(2) = 3e-81 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q MRQVAEATKP Sbjct: 193 GRHKQEAALFE-EMRQVAEATKP 214
>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 497 Score = 295 bits (756), Expect(2) = 3e-81 Identities = 146/192 (76%), Positives = 165/192 (85%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMDGSIG VGAVI+TKLDGHAKGGGALSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEHID+F++F+V+PFV+RLLG GDL GL+DK++ ++PADQQ EL+AKL+EG FTLRLLYE Sbjct: 276 GEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYE 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQNLLKMGP+ Q+FSMLPGFSSELMPKG EK+ + K KRYMTIMDSMT AELDSTNPKL Sbjct: 336 QFQNLLKMGPIGQVFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKL 395 Query: 615 MTESRTIRVARG 650 MTESR IR+ARG Sbjct: 396 MTESRIIRIARG 407 Score = 26.6 bits (57), Expect(2) = 3e-81 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q MRQVAEATKP Sbjct: 193 GRHKQEAALFE-EMRQVAEATKP 214
>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 499 Score = 274 bits (700), Expect(2) = 9e-75 Identities = 134/192 (69%), Positives = 159/192 (82%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMD SIG VGAVIVTK+DGHAKGGGALSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEH+D+F+VF+V+PFV+RLLG GD G +DK+ +VP DQQ EL+ KLSEG FTLR++YE Sbjct: 276 GEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYE 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQN+LKMGP+ Q+FSMLPGFS+ELMPKG+E +S+ K KRYMT+MDSMT ELDS+NPKL Sbjct: 336 QFQNILKMGPIGQVFSMLPGFSAELMPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKL 395 Query: 615 MTESRTIRVARG 650 MT+SR +R+ARG Sbjct: 396 MTDSRIMRIARG 407 Score = 26.6 bits (57), Expect(2) = 9e-75 Identities = 14/23 (60%), Positives = 14/23 (60%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q MRQVAEATKP Sbjct: 193 GRHKQEAALFE-EMRQVAEATKP 214
>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 496 Score = 271 bits (692), Expect = 2e-72 Identities = 136/210 (64%), Positives = 170/210 (80%) Frame = +3 Query: 21 AALFXXXCAKLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGG 200 AALF ++ + + LVIFVMD SIG VGAVIVTK+DGHAKGG Sbjct: 200 AALFEEM-RQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGG 258 Query: 201 GALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQS 380 GALS VAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GDL GL++K++ +VP DQQ Sbjct: 259 GALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGLVNKIQDVVPMDQQP 318 Query: 381 ELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYM 560 EL+ KLSEG FTLR++YEQFQ++LKMGP+ +FSMLPGFS+E+MP+G+EK+S+ KFKRYM Sbjct: 319 ELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAEMMPQGREKESQAKFKRYM 377 Query: 561 TIMDSMTPAELDSTNPKLMTESRTIRVARG 650 T+MDSMT ELDSTNPK++TESR +R+ARG Sbjct: 378 TMMDSMTDEELDSTNPKILTESRIMRIARG 407
>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)| Length = 495 Score = 265 bits (676), Expect(2) = 4e-72 Identities = 126/192 (65%), Positives = 156/192 (81%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMD SIG VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEH+D+F+VF+V+PFV+RLLG GD G +DK++ +VP DQQ EL+ KLS+G FTLR++Y+ Sbjct: 276 GEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYD 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQN+L MGP+ ++FSMLPG S+E+MPKG EK+S+ K KRYMT+MDSMT ELDS+NPK+ Sbjct: 336 QFQNILNMGPLKEVFSMLPGISAEMMPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKV 395 Query: 615 MTESRTIRVARG 650 ESR +R+ARG Sbjct: 396 FNESRMMRIARG 407 Score = 26.9 bits (58), Expect(2) = 4e-72 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q +L MRQVAEATKP Sbjct: 193 GRHKQEA-SLFEEMRQVAEATKP 214
>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)| Length = 495 Score = 254 bits (649), Expect(2) = 2e-68 Identities = 119/192 (61%), Positives = 152/192 (79%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMD SIG VGAVI+TK+DGHAKGGG LSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEH+D+F+VF+ +PFV+RLLG GD+ G ++K++ +VP DQQ EL+ LS G FTLR++Y+ Sbjct: 276 GEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYD 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQN+L MGP+ ++FSMLPG +E+MP+G EK+S+ + KRYMT+MDSMT ELDS+NPK+ Sbjct: 336 QFQNMLNMGPLKEVFSMLPGMRAEMMPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKV 395 Query: 615 MTESRTIRVARG 650 ESR +R+ARG Sbjct: 396 FNESRIMRIARG 407 Score = 25.4 bits (54), Expect(2) = 2e-68 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q +L MRQ++EATKP Sbjct: 193 GRHKQQA-SLFEEMRQISEATKP 214
>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)| Length = 479 Score = 247 bits (631), Expect(2) = 1e-66 Identities = 122/192 (63%), Positives = 153/192 (79%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 LVIFVMD SIG VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGT Sbjct: 216 LVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGT 275 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYE 434 GEH+D+F+VF+V+PFV+RLLG+GD GL+DK++ +VP D Q+ELV LS+G FTLR +Y+ Sbjct: 276 GEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYD 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 QFQ L++ P++Q+FSMLPG S+E+MPKG ++S+ K KRYMT+MDSMT ELDS NPK+ Sbjct: 336 QFQCSLRI-PLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKI 394 Query: 615 MTESRTIRVARG 650 ESR +R+ARG Sbjct: 395 FNESRIMRIARG 406 Score = 25.8 bits (55), Expect(2) = 1e-66 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +2 Query: 2 GRHMQXGCTLRGXMRQVAEATKP 70 GRH Q +L MRQVAEAT+P Sbjct: 193 GRHKQAA-SLFEEMRQVAEATEP 214
>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)| Length = 504 Score = 209 bits (532), Expect = 6e-54 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +++VMD SIG V +VIVTKLDGHAKGGGALSAVAATKSP+IFIGTG Sbjct: 217 IVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHIDDF+ F +PF+++LLG GD+ GLIDK+ + D L+ KL G FTLR +YEQ Sbjct: 277 EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNEL-KLDDNEALIEKLKHGQFTLRDMYEQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP SQI M+PGF ++ M KG E++S + K+ MTIMDSM ELDST+ K+ Sbjct: 336 FQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKV 395 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 396 FSKQPGRIQRVARG 409
>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)| Length = 499 Score = 208 bits (530), Expect = 1e-53 Identities = 110/194 (56%), Positives = 137/194 (70%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +IFVMDG+IG V +VIVTKLDGHAKGGGALSAVAAT+SP+IFIGTG Sbjct: 216 IIFVMDGTIGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 EHID+ + F +PFV++LLG GDL GL++K+ S + D+ EL+ KL G FTLR +YEQ Sbjct: 276 EHIDEMEPFKTKPFVSKLLGMGDLEGLMEKV-SDLKLDENEELMDKLKHGQFTLRDMYEQ 334 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN-PKL 614 FQN++KMGP +QI M+PGFS + M KG E++S K KR MT+MDSM ELD N KL Sbjct: 335 FQNIMKMGPFNQIIGMIPGFSPDFMSKGNERESMAKLKRLMTMMDSMNDGELDHPNGAKL 394 Query: 615 MTE--SRTIRVARG 650 ++ R RVARG Sbjct: 395 FSKQPGRAARVARG 408
>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog| Length = 556 Score = 167 bits (422), Expect = 3e-41 Identities = 90/193 (46%), Positives = 124/193 (64%), Gaps = 3/193 (1%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I VMDGSIG G++I+TK+DGHAKGGGA+SAVAATK+P++FIGTGE Sbjct: 235 IMVMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGE 294 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESI-VPADQ-QSELVAKLSEGAFTLRLLYE 434 H+ D ++F F+++LLG GD+ GLI+ ++S+ + D+ + + + EG FTLR Sbjct: 295 HVGDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQN 354 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 Q N LKMGP++ I SM+PG S+ + G E+ SK K K + IMDSMT EL+ Sbjct: 355 QMNNFLKMGPLTNIASMIPGLSNIMSQVGDEETSK-KIKNMIYIMDSMTTKELECDGRIF 413 Query: 615 MTE-SRTIRVARG 650 + E SR +RVARG Sbjct: 414 IKEPSRIVRVARG 426
>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)| Length = 448 Score = 165 bits (417), Expect = 1e-40 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+DG+IG +G++IVTKLDG AKGGGALSAVAAT +P+ FIGTG Sbjct: 216 VILVIDGTIGQQAYNQAMAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQ-QSELVAKLSEGAFTLRLLYE 434 E IDD + F+ + FV+RLLG GD+ GL++K+E + + + E + K G F L+ +Y Sbjct: 276 ERIDDLEPFDPKRFVSRLLGLGDIQGLLEKIEELQKEQEFREEDMEKFLRGKFNLKDMYA 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 Q + + KMGP+ QI M+PG L P+ + +EK KRY IMDSMT EL+ NP++ Sbjct: 336 QLEAMQKMGPLKQILQMIPGLGYSL-PEDAVRVGEEKLKRYKVIMDSMTEEELE--NPEI 392 Query: 615 MTESRTIRVARG 650 + SR R+ARG Sbjct: 393 INYSRIKRIARG 404
>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 522 Score = 162 bits (410), Expect = 8e-40 Identities = 86/191 (45%), Positives = 126/191 (65%), Gaps = 1/191 (0%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I ++D SIG GAVI+TKLDGHAKGGGALSAVAATK+P++FIGTGE Sbjct: 218 IMILDASIGQAAESQSKAFKETADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGE 277 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 HI+D + F+ F+++LLG GDL GL++ ++S+ + +V L +G FT+R +Q Sbjct: 278 HINDLERFSPRSFISKLLGLGDLEGLMEHVQSL--DFDKKNMVKNLEQGKFTVRDFRDQL 335 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 N++K+GP+S++ SM+PG S+ +M +++ + KR + I+DSMT ELDS + Sbjct: 336 GNIMKLGPLSKMASMIPGMSN-MMNGMNDEEGSLRMKRMLYIVDSMTEQELDSDGLLFVE 394 Query: 621 E-SRTIRVARG 650 + SR +RVARG Sbjct: 395 QPSRVLRVARG 405
>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)| Length = 442 Score = 162 bits (409), Expect = 1e-39 Identities = 86/190 (45%), Positives = 120/190 (63%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I V+DG+IG +G++IVTKLDG AKGGGALSAVA +P+ FIGTGE Sbjct: 214 ILVIDGTIGQQAREQALAFRKATDIGSIIVTKLDGSAKGGGALSAVAEIGAPIKFIGTGE 273 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 IDD +VF+ E F++RLLG GDL L++K+E + + E + + G FTLR + QF Sbjct: 274 RIDDLEVFDPERFISRLLGMGDLRSLLEKVEEVSEEEIAEESLDAILSGKFTLRDMRVQF 333 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 + + KMGP+ Q+ SMLPG +PK + ++E ++Y+ IMDSMT EL+ P ++ Sbjct: 334 EMMGKMGPLQQVMSMLPGAGK--LPKDASRMTEETIRKYLIIMDSMTEEELE--KPDIIK 389 Query: 621 ESRTIRVARG 650 SR R+ARG Sbjct: 390 HSRIRRIARG 399
>SRP54_YEAST (P20424) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 541 Score = 155 bits (393), Expect = 8e-38 Identities = 78/191 (40%), Positives = 122/191 (63%), Gaps = 1/191 (0%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I V+D SIG GA+I+TK+DGHA+GGGA+SAVAAT +P+IFIGTGE Sbjct: 226 IMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGE 285 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 HI D + F+ + F+++LLG GD+ L ++++++ + + + +G FTL +Q Sbjct: 286 HIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQM 345 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 Q ++KMGP+S I M+PG S+ + G+E+ S +K K+ + ++DSMT EL+S + Sbjct: 346 QTIMKMGPLSNIAQMIPGMSNMMNQVGEEETS-QKMKKMVYVLDSMTKEELESDGRMFIE 404 Query: 621 E-SRTIRVARG 650 E +R +RVA+G Sbjct: 405 EPTRMVRVAKG 415
>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 154 bits (390), Expect = 2e-37 Identities = 86/192 (44%), Positives = 119/192 (61%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+DG+IG +G++IVTKLDG AKGGGALSAVAAT +P+ FIGTG Sbjct: 216 VILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESI-VPADQQSELVAKLSEGAFTLRLLYE 434 E IDD + F+ FV+RLLG GD+ GL++K + + + + E + + G FTL+ +Y Sbjct: 276 EKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEIKEEDIERFLRGKFTLKDMYA 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 Q + + KMGP+ QI M+PG L P +E+ K++ IMDSMT EL NP++ Sbjct: 336 QLEAMRKMGPLKQILRMIPGLGYSL-PDDVISIGEERLKKFKVIMDSMTEEEL--LNPEI 392 Query: 615 MTESRTIRVARG 650 + SR R+ARG Sbjct: 393 INYSRIKRIARG 404
>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)| Length = 445 Score = 154 bits (390), Expect = 2e-37 Identities = 85/194 (43%), Positives = 125/194 (64%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+D SIG +G++IVTK+DG AKGGGALSAVAAT + + FIGTG Sbjct: 213 VILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGALSAVAATGAAIKFIGTG 272 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG--AFTLRLLY 431 E +D+ +VFN FV+R+LG GD+ +I+K++ + +Q + + ++ G TLR +Y Sbjct: 273 EKLDELEVFNPRRFVSRILGMGDIESIIEKIKGMEEYEQIQKKMEEVMSGKAKLTLRDIY 332 Query: 432 EQFQNLLKMGPMSQIFSMLPGFS-SELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNP 608 +Q L KMGP+++I MLPGF +P+ Q K +EK K+++ IM+SMT ELD NP Sbjct: 333 KQLTALRKMGPLNKILQMLPGFGVFSQIPEEQLKLGEEKIKKFLVIMNSMTYKELD--NP 390 Query: 609 KLMTESRTIRVARG 650 ++ +SR R+A+G Sbjct: 391 SIIDKSRIRRIAKG 404
>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)| Length = 487 Score = 152 bits (385), Expect = 6e-37 Identities = 89/192 (46%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 +IFVMDG+IG VG+VI+TKLDGH+ GGGALSAVAATKSP+IFIGTG Sbjct: 217 IIFVMDGAIGQAAFGQAKAFKDAVEVGSVIITKLDGHSNGGGALSAVAATKSPIIFIGTG 276 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E +++ + F+ E FV +LLG GDL G+ + + +V L EG T+R EQ Sbjct: 277 EKVNEIEEFDAESFVRQLLGMGDLKGIAKLAKDFAENAEYKTMVKHLQEGTLTVRDWKEQ 336 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELD-STNPKL 614 NL KMG + I M+ G + P Q ++KFK +M I+DSMT ELD S L Sbjct: 337 LSNLQKMGQLGNIMQMI-GLNH---PMFQGGNIEKKFKVFMVILDSMTDRELDGSAKTML 392 Query: 615 MTESRTIRVARG 650 ESR R+ARG Sbjct: 393 NDESRIRRLARG 404
>SRP54_YARLI (Q99150) Signal recognition particle 54 kDa protein homolog (SRP54)| Length = 536 Score = 150 bits (379), Expect = 3e-36 Identities = 84/191 (43%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I V+D SIG G++I+TK+DGHAKGGGA+SAVAAT +P+IFIGTGE Sbjct: 220 IMVLDASIGQAAEPQSRAFKDASDFGSIILTKMDGHAKGGGAISAVAATNTPIIFIGTGE 279 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 HI D + F+ + F+++LLG GDL GL++ M+S+ Q + + + EG FTL L +Q Sbjct: 280 HIHDLEAFSPKQFISKLLGIGDLQGLMETMQSL--NLDQKKTMEHIQEGIFTLADLRDQM 337 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM- 617 N+LKMG +S I M+PG S + +++ + KR + I+DSM ELDS Sbjct: 338 GNMLKMGSLSSIAGMIPGLSG-MASSISDEEGTRRIKRMIYILDSMNQKELDSDGSIFKE 396 Query: 618 TESRTIRVARG 650 SR RVARG Sbjct: 397 VPSRITRVARG 407
>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)| Length = 451 Score = 149 bits (377), Expect = 5e-36 Identities = 82/194 (42%), Positives = 122/194 (62%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V V+D SIG +G +I+TK+DG AKGGGALSAVAAT + + FIGTG Sbjct: 216 VTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSAVAATGATIKFIGTG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKL--SEGAFTLRLLY 431 E ID+ +VFN FVAR+LG GD+ +++K++ + D+ + + ++ +G TLR +Y Sbjct: 276 EKIDELEVFNPRRFVARILGMGDIETILEKIKEVENYDKMQKKMEEVISGKGKLTLRDVY 335 Query: 432 EQFQNLLKMGPMSQIFSMLPGFSS-ELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNP 608 Q L KMGP+S++F +LPG +P+ Q K +EK ++++ IM+SMT ELD NP Sbjct: 336 NQLIALRKMGPLSKLFQLLPGIGMLGQIPEDQLKVGEEKMRKWLAIMNSMTYEELD--NP 393 Query: 609 KLMTESRTIRVARG 650 ++ +SR R+A G Sbjct: 394 SIIDKSRMRRIALG 407
>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 149 bits (376), Expect = 7e-36 Identities = 84/192 (43%), Positives = 117/192 (60%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+DG+IG +G++IVTKLD AKGGGALSAVAAT +P+ FIGTG Sbjct: 216 VILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESI-VPADQQSELVAKLSEGAFTLRLLYE 434 E IDD + F+ FV+RLLG GD+ GL++K + + + E + + +G FTL+ +Y Sbjct: 276 EKIDDLEPFDPARFVSRLLGLGDIQGLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYA 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 Q + + KMGP+ QI M+PG L P +E+ +++ IMDSMT EL NP + Sbjct: 336 QLEAMRKMGPLKQILRMIPGLGYSL-PDEVISVGEERLRKFKVIMDSMTEEEL--MNPDI 392 Query: 615 MTESRTIRVARG 650 + SR R+ARG Sbjct: 393 INYSRIKRIARG 404
>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)| Length = 451 Score = 149 bits (375), Expect = 9e-36 Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 1/196 (0%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXX-VGAVIVTKLDGHAKGGGALSAVAATKSPVI 242 N +I V+DG+IG +G++IVTKLDG AKGGGALSAVA TK+P+ Sbjct: 211 NPDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIK 270 Query: 243 FIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLR 422 FIG GE IDD + F+ + F++RLLG GDL L++K E +V ++ E + + G FTL Sbjct: 271 FIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDMVD-EKTEESIDAIMRGKFTLN 329 Query: 423 LLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDST 602 L Q + + MG M +I SM+PGF MPK ++ K K+Y I+ SMT E + Sbjct: 330 ELMTQLEAIENMGSMKKILSMIPGFGG-AMPKELSHLTEAKIKKYKVIISSMTKEERE-- 386 Query: 603 NPKLMTESRTIRVARG 650 NPK++ SR R+ARG Sbjct: 387 NPKIIKASRIRRIARG 402
>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 148 bits (373), Expect = 2e-35 Identities = 83/192 (43%), Positives = 116/192 (60%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+DG+IG +G++IVTKLD AKGGGALSAVAAT +P+ FIG G Sbjct: 216 VILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESI-VPADQQSELVAKLSEGAFTLRLLYE 434 E IDD + F+ FV+RLLG GD+ GL++K + + + E + + G FTL+ +Y Sbjct: 276 EKIDDLEPFDPARFVSRLLGLGDIQGLLEKFKELEKEVEFTEEDIDRFLRGKFTLKDMYA 335 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 Q + + KMGP+ QI M+PG L P +E+ +++ IMDSMT EL NP++ Sbjct: 336 QLEAMRKMGPLKQILRMIPGLGYSL-PDELISVGEERLRKFKVIMDSMTEEEL--MNPEI 392 Query: 615 MTESRTIRVARG 650 + SR R+ARG Sbjct: 393 INYSRIKRIARG 404
>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)| Length = 444 Score = 146 bits (368), Expect = 6e-35 Identities = 83/194 (42%), Positives = 121/194 (62%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+D SIG +G++IV+K+DG AKGGGALSAV AT + + FIGTG Sbjct: 213 VILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGALSAVIATGAQIKFIGTG 272 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG--AFTLRLLY 431 E +D+ +VFN FV+RLLG GD+ +I+K++S+ + + + + G TLR +Y Sbjct: 273 EKLDELEVFNPRRFVSRLLGLGDIESIIEKIKSVEDYENLEKRMEDVISGKTKLTLRDIY 332 Query: 432 EQFQNLLKMGPMSQIFSMLPGFS-SELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNP 608 +Q L KMGP+ +IF MLPG +P+ Q K +EK + +M IM+SMT ELD NP Sbjct: 333 KQLIALRKMGPLGKIFQMLPGAGILSQVPEEQLKLGEEKIRTFMAIMNSMTYKELD--NP 390 Query: 609 KLMTESRTIRVARG 650 ++ ++R R+A+G Sbjct: 391 SIIDKARMRRIAKG 404
>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 144 bits (364), Expect = 2e-34 Identities = 78/191 (40%), Positives = 117/191 (61%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D ++G + V++TKLD AKGGGALSAVA T +P+ F+GTG Sbjct: 215 VLLVLDATVGQKAGDHAEAFHEAVQLTGVVITKLDTAAKGGGALSAVARTGAPIKFVGTG 274 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E +DD + FN FVARLLG GD+ L+ + E ++ ++++E V EG FTL+ LYEQ Sbjct: 275 ERVDDLEEFNPRSFVARLLGIGDIDELLRRTEEMLEEEEKAEDVL---EGEFTLKDLYEQ 331 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 617 + L KMGP+ ++ +PG + + ++E+ K+Y IMDSMT EL+ NP+++ Sbjct: 332 LEALSKMGPVDKLLQYVPGMGGGRNVRKISQITEERLKKYKVIMDSMTEKELE--NPEIL 389 Query: 618 TESRTIRVARG 650 +SR R+A G Sbjct: 390 NKSRIRRIAIG 400
>SRP54_ASPNG (Q00179) Signal recognition particle 54 kDa protein homolog| Length = 534 Score = 144 bits (362), Expect = 3e-34 Identities = 75/192 (39%), Positives = 115/192 (59%), Gaps = 2/192 (1%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I V+D +IG GA+I+TK DGHA GGGA+SAVAAT +P+I++GTGE Sbjct: 219 ILVLDSTIGQAAEAQSSAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGE 278 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIV-PADQQSELVAKLSEGAFTLRLLYEQ 437 H+ D + F + F+ +LLG GD+ GL++ ++++ + E +SEG +TLR E Sbjct: 279 HLMDLERFEPKAFIQKLLGMGDMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFREN 338 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 617 +++KMGP+S++ M+PG S+ L ++ K +R + I DSMT AELD + Sbjct: 339 ITSIMKMGPLSKLSGMIPGLSN-LTAGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFV 397 Query: 618 TE-SRTIRVARG 650 + SR +R+A G Sbjct: 398 EQPSRMVRIACG 409
>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)| Length = 443 Score = 140 bits (354), Expect = 3e-33 Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 4/192 (2%) Frame = +3 Query: 87 VMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHI 266 V+D IG + VI+TKLDG AKGGGALSAV+ TK+P+ FIG GE Sbjct: 214 VLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETP 273 Query: 267 DDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQN 446 +DF+ F + F++RLLG GDL L++K E + ++ V L +G FTL+ +Y+Q + Sbjct: 274 EDFEKFEADRFISRLLGMGDLKSLMEKAEESL--SEEDVNVEALMQGRFTLKDMYKQLEA 331 Query: 447 LLKMGPMSQIFSMLP----GFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 + KMGP+ QI SMLP G + + + +K K Y IMDSMT E+ +PKL Sbjct: 332 MNKMGPLKQIMSMLPMGMGGLGGVKLSDEMFQATSDKMKNYKVIMDSMTEDEM--ADPKL 389 Query: 615 MTESRTIRVARG 650 + SR R++RG Sbjct: 390 IGGSRIKRISRG 401
>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)| Length = 440 Score = 140 bits (352), Expect = 4e-33 Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 1/189 (0%) Frame = +3 Query: 87 VMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHI 266 V+D IG + VI+TKLDG AKGGGALSAV+ TK+P+ FIG GE Sbjct: 214 VLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETP 273 Query: 267 DDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQN 446 +DF+ F + F++RLLG GDL L++K E + ++ V L +G FTL+ +Y+Q + Sbjct: 274 EDFEKFEADRFISRLLGMGDLKSLMEKAEESL--SEEDVNVEALMQGRFTLKDMYKQLEA 331 Query: 447 LLKMGPMSQIFSMLP-GFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMTE 623 + KMGP+ QI SMLP G + + +K K Y IMDSMT E+ T+P+++ Sbjct: 332 MNKMGPLKQIMSMLPMGMGGMKFSDEMFQATSDKMKNYKVIMDSMTEEEM--TDPRVIGG 389 Query: 624 SRTIRVARG 650 SR R+++G Sbjct: 390 SRIKRISKG 398
>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)| Length = 447 Score = 139 bits (351), Expect = 6e-33 Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 5/196 (2%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 VI V+D SIG +G+VI+TK+DG AKGGGALSAV AT + + FIGTG Sbjct: 214 VILVIDASIGQKAYDLASRFHQASPIGSVIITKMDGTAKGGGALSAVVATGATIKFIGTG 273 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSE--GAFTLRLLY 431 E ID+ + FN + FV+R+LG GD+ +++K++ + D+ + + + E G TLR +Y Sbjct: 274 EKIDELETFNAKRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVY 333 Query: 432 EQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSK---EKFKRYMTIMDSMTPAELDST 602 Q L KMGP+S++ +PG ++P E Q K EK +R++ ++SMT EL+ Sbjct: 334 AQIIALRKMGPLSKVLQHIPGLGI-MLPTPSEDQLKIGEEKIRRWLAALNSMTYKELE-- 390 Query: 603 NPKLMTESRTIRVARG 650 NP ++ +SR R+A G Sbjct: 391 NPNIIDKSRMRRIAEG 406
>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 134 bits (338), Expect = 2e-31 Identities = 76/190 (40%), Positives = 114/190 (60%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D +IG + +I+TK DG AKGGGALSA P+ FIGTGE Sbjct: 208 LLVLDAAIGQLASKQAQAFHEAIGINGIIITKFDGTAKGGGALSAARQIGIPIAFIGTGE 267 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 ++DF+ F+ FV+RLLG GD+ L++K+E I ++++ + A L +G FTL+ +Y+Q Sbjct: 268 KVEDFERFDPAGFVSRLLGMGDIKALMEKIERIA-SEEELDPEAFL-KGTFTLKDIYKQI 325 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 + + KMGP+ +IF MLP + + ++EK K++ IMDSMT EL NPK++ Sbjct: 326 EAMNKMGPVRKIFEMLPFGLGLKVDNDVMEMTQEKMKKFRVIMDSMTEEEL--LNPKIID 383 Query: 621 ESRTIRVARG 650 SR R+A G Sbjct: 384 SSRIRRIAIG 393
>SRP54_AERPE (Q9YB62) Signal recognition 54 kDa protein (SRP54)| Length = 441 Score = 134 bits (337), Expect = 2e-31 Identities = 73/192 (38%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V V+D SIG +G++IVTK+DG A+GGGAL+A A T + + FIGTG Sbjct: 213 VALVIDASIGQKAMGLAERFHKSTPIGSIIVTKMDGTARGGGALTAAAVTGARIKFIGTG 272 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E + + + F FVAR+LG GDL L+++++S+ A + + +G T+R +Y Q Sbjct: 273 ETLGELEPFAPRRFVARILGMGDLESLLERIKSLEEAGELDRAAEDVLKGRITMRTIYRQ 332 Query: 438 FQNLLKMGPMSQIFSMLPGFSS-ELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 + + K+GP+ ++ MLPG S + +G K +EK KR+M I++SMT ELD P++ Sbjct: 333 LRAMRKLGPLGKVLQMLPGASMLASIDEGALKLGEEKMKRWMAIIESMTYEELD--RPEI 390 Query: 615 MTESRTIRVARG 650 + + R R+A G Sbjct: 391 IDKRRMRRIAIG 402
>SRP54_PYRAE (Q8ZT95) Signal recognition 54 kDa protein (SRP54)| Length = 433 Score = 130 bits (328), Expect = 3e-30 Identities = 69/191 (36%), Positives = 116/191 (60%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D ++G + +VI+TK+D A+GGGAL+AVA T + V FIG G Sbjct: 213 VVLVIDATVGKMAAAQAEAFMKYLPIHSVIITKMDSTARGGGALAAVAKTGAKVKFIGVG 272 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E +D+F+ F+ FVAR+LG GDL L++K++++ ++ E++ ++ G L +Q Sbjct: 273 EDVDEFEQFSPRKFVARVLGMGDLDTLLEKIKAVF---EEEEVLEEIESGRLDLLTFKKQ 329 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 617 +LLK+GP+S++F +LPG + + + Q + S+ K++ I+ SMT EL NP+++ Sbjct: 330 IDSLLKLGPLSKVFQLLPGNLAAKISEEQIELSQRNLKKWRAILSSMTLEEL--KNPEIL 387 Query: 618 TESRTIRVARG 650 SR R+A G Sbjct: 388 NASRIRRIALG 398
>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)| Length = 456 Score = 128 bits (321), Expect = 2e-29 Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ ++D ++G V +I+TK+DG AKGGGALSAVA P+ FIGTG Sbjct: 211 VLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTG 270 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKM-ESIVPADQQSELVAKLSEGAFTLRLLYE 434 EH+DD +VF+ + F++RLLG GDL L + + E+ + ++ E KL G F L+ +Y+ Sbjct: 271 EHMDDLEVFDPKKFLSRLLGLGDLESLFETVQEADITEEEAQESFEKLMTGKFNLKDMYD 330 Query: 435 QFQNLLKMGPMSQIFSMLPGF---SSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 ++ K G M ++ LP S+ + + + +++K + Y IMDSMT EL+ N Sbjct: 331 VWEKFSKPGLMKKLVDALPLARIPGSQKIDDSKIQSAEDKLRMYRIIMDSMTFEELE--N 388 Query: 606 PKLMTESRTIRVARG 650 P+++ R R+ARG Sbjct: 389 PEIINAKRITRIARG 403
>SRP54_HALVO (Q977V2) Signal recognition 54 kDa protein (SRP54)| Length = 465 Score = 127 bits (320), Expect = 2e-29 Identities = 72/198 (36%), Positives = 113/198 (57%), Gaps = 6/198 (3%) Frame = +3 Query: 75 LVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGT 254 L + V+D +IG +G V++TKLDG AKGGGAL+AV T S + F+G Sbjct: 210 LNLLVLDAAIGQGAKEQAQQFDESIGIGGVVITKLDGTAKGGGALTAVNETDSSIAFLGM 269 Query: 255 GEHIDDFDVFNVEPFVARLLGRGDLPGLIDKME---SIVPADQQSELVAKLSEGAFTLRL 425 GE + D + F F++RLLG GDL L +++E S A+ + ++ +G FTL+ Sbjct: 270 GETVQDIERFEPNGFISRLLGMGDLKQLSERVERAMSETQAEDEDWDPEEMMKGNFTLKD 329 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFS---SELMPKGQEKQSKEKFKRYMTIMDSMTPAELD 596 + +Q + + KMGP+ Q+ M+PGF + +P +K++ + + IMDSMT EL+ Sbjct: 330 MQKQMEAMDKMGPLDQVLDMIPGFGGGIKDQLPDDAMDVTKDRMRSFEVIMDSMTEEELE 389 Query: 597 STNPKLMTESRTIRVARG 650 NP+ + SR R+A+G Sbjct: 390 --NPRKVGASRVRRIAQG 405
>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)| Length = 455 Score = 127 bits (318), Expect = 4e-29 Identities = 72/195 (36%), Positives = 114/195 (58%), Gaps = 4/195 (2%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D ++G V +I+TK+DG AKGGGALSAVA + P+ FIGTG Sbjct: 211 VLMVIDATMGQQAGPESKAINDAVGVTGIIITKMDGTAKGGGALSAVAKMRVPIYFIGTG 270 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKM-ESIVPADQQSELVAKLSEGAFTLRLLYE 434 EH+DD ++F+ + F++RLLG GDL L + + E+ + ++ + KL G F L+ +Y+ Sbjct: 271 EHMDDMEIFDPKKFLSRLLGLGDLETLFETVKEANITEEEAQKSFEKLMTGKFNLKDMYD 330 Query: 435 QFQNLLKMGPMSQIFSMLPGF---SSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 ++ + G M ++ LP S+ + Q +++K +RY IMDSMT EL+ N Sbjct: 331 VWEKFSRPGLMKKLVDSLPLAKLPGSQKINDDQILTAEQKLQRYRIIMDSMTFQELE--N 388 Query: 606 PKLMTESRTIRVARG 650 P+++ R R+ARG Sbjct: 389 PEIINAKRITRIARG 403
>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 124 bits (310), Expect = 3e-28 Identities = 70/195 (35%), Positives = 100/195 (51%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V+FV+D IG V +TKLDG A+GG ALS T P++F Sbjct: 219 NPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILF 278 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 TGE ++DFDVF+ + +R+LG GD+ LI++ E + A Q E AK+ G TL Sbjct: 279 ASTGEKLEDFDVFHPDRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLED 338 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 EQ + KMGP+ + MLPG + M + ++ R I+ MTP E + Sbjct: 339 FLEQMLAVRKMGPIGNLLGMLPGAAQ--MKDALAEVDDKQLDRVQAIIRGMTPQE--RAD 394 Query: 606 PKLMTESRTIRVARG 650 PK++ SR +R+A G Sbjct: 395 PKIINASRRLRIANG 409
>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)| Length = 525 Score = 124 bits (310), Expect = 3e-28 Identities = 70/195 (35%), Positives = 100/195 (51%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V+FV+D IG V +TKLDG A+GG ALS T P++F Sbjct: 219 NPDEVLFVLDAMIGQDAVTTAAAFGEGVGFTGVALTKLDGDARGGAALSVREVTGVPILF 278 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 TGE ++DFDVF+ + +R+LG GD+ LI++ E + A Q E AK+ G TL Sbjct: 279 ASTGEKLEDFDVFHPDRMASRILGMGDVLSLIEQAEQVFDAQQAEEAAAKIGAGELTLED 338 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 EQ + KMGP+ + MLPG + M + ++ R I+ MTP E + Sbjct: 339 FLEQMLAVRKMGPIGNLLGMLPGAAQ--MKDALAEVDDKQLDRVQAIIRGMTPQE--RAD 394 Query: 606 PKLMTESRTIRVARG 650 PK++ SR +R+A G Sbjct: 395 PKIINASRRLRIANG 409
>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)| Length = 521 Score = 120 bits (302), Expect = 3e-27 Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 2/197 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V+FV+D IG V++TKLDG A+GG ALS T P++F Sbjct: 219 NPDEVLFVLDAMIGQDAVTTAAAFGAGVGFTGVVLTKLDGDARGGAALSVREVTGVPILF 278 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 TGE +DDFDVF+ + +R+LG GD+ LI++ E + A+Q AK+ G TL Sbjct: 279 ATTGEKLDDFDVFHPDRMASRILGMGDVLSLIEQAEQVFDAEQAEAAAAKIVAGELTLED 338 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFS--SELMPKGQEKQSKEKFKRYMTIMDSMTPAELDS 599 EQ + KMG + + MLPG E++ + +KQ R I+ MTP E Sbjct: 339 FLEQMLAVRKMGLIGNLLGMLPGAGQVKEVLEQVDDKQ----LDRLQAIIRGMTPQE--R 392 Query: 600 TNPKLMTESRTIRVARG 650 +PK++ SR +R+A G Sbjct: 393 ADPKIINASRRLRIANG 409
>SRP54_HALSA (Q9HMN5) Signal recognition 54 kDa protein (SRP54)| Length = 460 Score = 119 bits (299), Expect = 6e-27 Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 6/196 (3%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D +IG + V +TKLDG AKGGG+L+AV T S + F+G+GE Sbjct: 212 LLVLDAAIGQGAKQQARQFDASIGIDGVAITKLDGTAKGGGSLTAVNETDSTIAFLGSGE 271 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSEL---VAKLSEGAFTLRLLY 431 + D + F + F++RLLG GDL L +++E + Q + L +G FTL + Sbjct: 272 TVQDIERFEPDSFISRLLGMGDLKQLTERVERAMEETQDDDEDWDPEDLMKGEFTLHDMR 331 Query: 432 EQFQNLLKMGPMSQIFSMLPGFSSELM---PKGQEKQSKEKFKRYMTIMDSMTPAELDST 602 +Q Q + MGP+ Q+ M+PG LM P ++E+ + + IMDSMT AE+ Sbjct: 332 KQMQAMDNMGPLDQVMDMIPGMGGGLMDELPDDAMDVTQERMRGFEVIMDSMTEAEM--A 389 Query: 603 NPKLMTESRTIRVARG 650 +P+ + S+ R+ARG Sbjct: 390 DPRSVGASQIRRIARG 405
>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)| Length = 454 Score = 117 bits (294), Expect = 2e-26 Identities = 64/195 (32%), Positives = 104/195 (53%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +++V D G + V++TK+DG A+GG ALS P+ F Sbjct: 207 NPSEILYVADAMQGQTALETAKTFHERLGLTGVVITKMDGDARGGLALSVKEVLGVPIKF 266 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 IG GE I+D + F + R+LG GD+ L++K + ++ D+ + K+ G F L Sbjct: 267 IGVGEKIEDIEPFYPDRIAQRILGLGDIQSLVEKAQEVITEDKAQVMATKVMTGEFDLED 326 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 L E + + +MGP+ ++ SM+PG + +L K +++FK+ I++SMTP E N Sbjct: 327 LREMLRMIQQMGPLDKLLSMIPGVAPQLK---HLKVDEKQFKKIEAIINSMTPEE--RRN 381 Query: 606 PKLMTESRTIRVARG 650 PK++ SR R+ARG Sbjct: 382 PKIINMSRKKRIARG 396
>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)| Length = 516 Score = 109 bits (273), Expect = 6e-24 Identities = 67/195 (34%), Positives = 94/195 (48%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N ++ V+D IG V VI+TK+DG +GG ALS T P+ F Sbjct: 214 NPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKF 273 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 GTGE I D + F+ + +R+LG GDL LI+K + +EL K+ E +F Sbjct: 274 TGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFND 333 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 EQ + MG M I M+PG ++ K + + R I+ SMTP E + N Sbjct: 334 FIEQLDQVQNMGSMEDILKMIPGMANN-PALANVKVDEGEIARKRAIVSSMTPEERE--N 390 Query: 606 PKLMTESRTIRVARG 650 P L+T SR R+A G Sbjct: 391 PDLLTPSRRRRIASG 405
>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 107 bits (267), Expect = 3e-23 Identities = 60/190 (31%), Positives = 97/190 (51%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D G + +I++++DG +KGG ALS TK P+ F+ +GE Sbjct: 219 LLVIDSMTGQDAVVTASSFNEKLAISGLILSRIDGDSKGGAALSVKYITKKPIKFLSSGE 278 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 ++ D + F+ E +R+L GD+ ++K SIV ++ + AKL +G F L +Q Sbjct: 279 NLIDLEEFDAERLASRILDMGDIISFVEKAASIVDREEAEKTAAKLKKGKFDLNDYLQQM 338 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 +++ KMG I SMLPG + Q K + + + I+ SMTP E NP ++ Sbjct: 339 RSIKKMGGFGSILSMLPGSGKIMDQIDQSKLNSKIIEHQEAIILSMTPKE--RKNPDIIN 396 Query: 621 ESRTIRVARG 650 SR R+A G Sbjct: 397 ASRRKRIAVG 406
>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 105 bits (263), Expect = 9e-23 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 1/196 (0%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V++V D G V V+++K D +KGG AL P+ F Sbjct: 205 NPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRF 264 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 IG+GE I D DVF E V RL+G GD+ L +K S++ ++ +L KL +G FT Sbjct: 265 IGSGEKIPDLDVFVPERIVGRLMGAGDIVSLAEKTASVLNPNEAKDLSKKLKKGQFTFND 324 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMP-KGQEKQSKEKFKRYMTIMDSMTPAELDST 602 Q + + K+G MS + SM+PG + K + +S + K+ +++SMT E + Sbjct: 325 FLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKEQE-- 382 Query: 603 NPKLMTESRTIRVARG 650 NP+++ SR R+A G Sbjct: 383 NPEILNGSRRKRIALG 398
>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)| Length = 448 Score = 105 bits (263), Expect = 9e-23 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 1/196 (0%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V++V D G V V+++K D +KGG AL P+ F Sbjct: 205 NPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRF 264 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 IG+GE I D DVF E V RL+G GD+ L +K S++ ++ +L KL +G FT Sbjct: 265 IGSGEKIPDLDVFMPERIVGRLMGAGDIISLAEKTASVLNPNEAKDLSKKLKKGQFTFND 324 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMP-KGQEKQSKEKFKRYMTIMDSMTPAELDST 602 Q + + K+G MS + SM+PG + K + +S + K+ +++SMT E + Sbjct: 325 FLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKERE-- 382 Query: 603 NPKLMTESRTIRVARG 650 NP+++ SR R+A G Sbjct: 383 NPEILNGSRRKRIALG 398
>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 101 bits (251), Expect = 2e-21 Identities = 62/195 (31%), Positives = 95/195 (48%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N + V+D G + V++TKLDG +GG ALS A T +P+ F Sbjct: 214 NPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPIKF 273 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 G GE +D + F+ E +R+LG GD+ LI+K ++ V D+ EL K+ +FTL Sbjct: 274 AGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTLDD 333 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 EQ + MGP+ ++ M+PG K + K+ I+ SMT L+ Sbjct: 334 FLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQ-LNHVEAIIKSMT--VLEKEQ 390 Query: 606 PKLMTESRTIRVARG 650 P ++ SR R+A+G Sbjct: 391 PDIINASRRKRIAKG 405
>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)| Length = 449 Score = 100 bits (248), Expect = 5e-21 Identities = 59/195 (30%), Positives = 91/195 (46%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N + V+D G + +I++++DG KGG ALS T+ P+ F Sbjct: 214 NPTETLLVIDSMTGQDAVITAKTFSEKLEISGLILSRIDGDTKGGAALSVKYFTQKPIKF 273 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 + +GE + D + FN E +R+L GD+ + K SIV ++ + KL G F L Sbjct: 274 LSSGEKLTDLEEFNAERLASRILDMGDIISFVKKAASIVDREEAEKTAIKLKSGKFDLND 333 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 +Q +++ KMG I SMLPG Q K + + + I+ SMT E N Sbjct: 334 YLQQMRSIKKMGGFGSILSMLPGSGKIFDQIDQSKLNSKIIEHQEAIILSMTLKE--RKN 391 Query: 606 PKLMTESRTIRVARG 650 P ++ SR R+A G Sbjct: 392 PDIINASRRKRIAAG 406
>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)| (p48) Length = 453 Score = 96.3 bits (238), Expect = 7e-20 Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 2/197 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +FV+D G + V++TK+DG A+GG ALS T P+ F Sbjct: 213 NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKF 272 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLR 422 +G GE + + F+ + +R+LG GD+ LI+ +ES V Q +L +KL +G F L Sbjct: 273 LGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLN 332 Query: 423 LLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEK-FKRYMTIMDSMTPAELDS 599 EQ + + MG M+ + LPG +P + Q +K R I++SMT E Sbjct: 333 DFLEQLRQMKNMGGMASLMGKLPGMGQ--IPDNVKSQMDDKVLVRMEAIINSMTMKE--R 388 Query: 600 TNPKLMTESRTIRVARG 650 P+++ SR R+A G Sbjct: 389 AKPEIIKGSRKRRIAAG 405
>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 96.3 bits (238), Expect = 7e-20 Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 2/197 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +FV+D G + V++TK+DG A+GG ALS T P+ F Sbjct: 213 NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKF 272 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLR 422 +G GE + + F+ + +R+LG GD+ LI+ +ES V Q +L +KL +G F L Sbjct: 273 LGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLN 332 Query: 423 LLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEK-FKRYMTIMDSMTPAELDS 599 EQ + + MG M+ + LPG +P + Q +K R I++SMT E Sbjct: 333 DFLEQLRQMKNMGGMASLMGKLPGMGQ--IPDNVKSQMDDKVLVRMEAIINSMTMKE--R 388 Query: 600 TNPKLMTESRTIRVARG 650 P+++ SR R+A G Sbjct: 389 AKPEIIKGSRKRRIAAG 405
>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)| Length = 453 Score = 96.3 bits (238), Expect = 7e-20 Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 2/197 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +FV+D G + V++TK+DG A+GG ALS T P+ F Sbjct: 213 NPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKF 272 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLR 422 +G GE + + F+ + +R+LG GD+ LI+ +ES V Q +L +KL +G F L Sbjct: 273 LGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLN 332 Query: 423 LLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEK-FKRYMTIMDSMTPAELDS 599 EQ + + MG M+ + LPG +P + Q +K R I++SMT E Sbjct: 333 DFLEQLRQMKNMGGMASLMGKLPGMGQ--IPDNVKSQMDDKVLVRMEAIINSMTMKE--R 388 Query: 600 TNPKLMTESRTIRVARG 650 P+++ SR R+A G Sbjct: 389 AKPEIIKGSRKRRIAAG 405
>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)| Length = 429 Score = 94.7 bits (234), Expect = 2e-19 Identities = 64/191 (33%), Positives = 97/191 (50%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D G V +++TKLDG A+GG ALSA T P+ F G Sbjct: 213 VLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVS 272 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E + + F E R+LG GD+ L +K+ + A ++E A S +L +Q Sbjct: 273 EKPEGLEPFYPERLAGRILGMGDVASLAEKVRA---AGLEAE--APKSAKELSLEDFLKQ 327 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 617 QNL ++GP S+I +LPG +P+G K ++ KR I+ SMTP E +P+++ Sbjct: 328 MQNLKRLGPFSEILGLLPG-----VPQGL-KVDEKAIKRLEAIVLSMTPEE--RKDPRIL 379 Query: 618 TESRTIRVARG 650 SR R+A+G Sbjct: 380 NGSRRKRIAKG 390
>SRP54_SYNP7 (Q55311) Signal sequence-binding protein| Length = 485 Score = 91.3 bits (225), Expect = 2e-18 Identities = 52/191 (27%), Positives = 93/191 (48%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D IG + I+TKLDG ++GG ALS + P+ F+G G Sbjct: 216 VLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLG 275 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E ++ F+ E +R+LG GD+ L++K + + ++ K+ F +Q Sbjct: 276 EKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQ 335 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLM 617 + L MG ++ ++PG ++ + Q +Q + + KR +++SMTP E + Sbjct: 336 MRLLKNMGSLAGFIKLIPGLGGKINDE-QLRQGERQLKRVEAMINSMTPQERRDPDLLSN 394 Query: 618 TESRTIRVARG 650 + SR R+A+G Sbjct: 395 SPSRRHRIAKG 405
>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)| Length = 462 Score = 90.5 bits (223), Expect = 4e-18 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 1/196 (0%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +F +D G + VI+TK+DG A+GG ALS T P+ F Sbjct: 213 NPIETLFTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKF 272 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLR 422 +G GE + + F+ + +R+LG GD+ LI+ +E V ++ ++ K +G FTL Sbjct: 273 LGVGEKTEALEPFHPDRVASRILGMGDVLSLIEDLERSVDREKAEKMAQKFKKGDDFTLD 332 Query: 423 LLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDST 602 EQ + KMG M + LPG + L + + + F + I++SMT E Sbjct: 333 DFREQLIEMKKMGGMMSMLEKLPG-AKNLSEHVKNQVDDKMFVKMEAIINSMTLKE--RA 389 Query: 603 NPKLMTESRTIRVARG 650 NP ++ SR R+A G Sbjct: 390 NPDIIKGSRRRRIALG 405
>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast| precursor (SRP54) (54 chloroplast protein) (54CP) (FFC) Length = 564 Score = 88.6 bits (218), Expect = 1e-17 Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 2/196 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N V+ V+D G + I+TKLDG ++GG ALS + P+ Sbjct: 288 NPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKL 347 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 +G GE ++D + F + R+LG GD+ ++K ++ + +L K+ F Sbjct: 348 VGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFND 407 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 +Q + + KMG M+++ M+PG + Q +++++ +++ MTP E + Sbjct: 408 FLKQTRAVAKMGSMTRVLGMIPGMGK--VSPAQIREAEKNLLVMEAMIEVMTPEERE--R 463 Query: 606 PKLMTES--RTIRVAR 647 P+L+ ES R R+A+ Sbjct: 464 PELLAESPERRKRIAK 479
>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)| Length = 482 Score = 84.0 bits (206), Expect = 4e-16 Identities = 48/190 (25%), Positives = 88/190 (46%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D G + I+TKLDG +GG ALS + P+ F+G GE Sbjct: 217 LLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGE 276 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQF 440 ++ F + +R+L GD+ L++K + + +L K+ E F +Q Sbjct: 277 KVEALQPFYPDRLASRILNMGDVLTLVEKAQEAIDVGDVEKLQNKILEATFDFDDFIKQM 336 Query: 441 QNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMT 620 + + MG + + M+PG + + G ++ +++ KR ++ SMT E + + + Sbjct: 337 RFMKNMGSLGGLLKMIPGMNK--LSSGDIEKGEKELKRTEAMISSMTTEERKNPDLLAKS 394 Query: 621 ESRTIRVARG 650 SR R+A+G Sbjct: 395 PSRRRRIAQG 404
>SRP54_MYCMY (Q01442) Signal recognition particle protein (Fifty-four homolog)| Length = 447 Score = 84.0 bits (206), Expect = 4e-16 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 1/201 (0%) Frame = +3 Query: 51 LLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATK 230 L K+ + ++ V+DG G + V+VTKLDG A+GG LS TK Sbjct: 208 LKKKTSPNEILLVVDGMSGQEIINVTNEFNDKLKLSGVVVTKLDGDARGGATLSISYLTK 267 Query: 231 SPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGA 410 P+ FIG GE + F + RL+G GD+ L ++ + + + ++ G Sbjct: 268 LPIKFIGEGEGYNALAAFYPKRMADRLMGMGDIETLFERAVENIDERSIQKTMNRMFLGQ 327 Query: 411 FTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAE 590 F L L Q + KMG ++++ MLP + + Q ++++ K + +MDSMT E Sbjct: 328 FDLEDLRNQLAQIAKMGSLNKLMKMLP---INKVSESQIQEAQRKLAVFSILMDSMTLKE 384 Query: 591 LDSTNPKLMTE-SRTIRVARG 650 +P+++ SR R+ +G Sbjct: 385 --RRDPRVLKAISRKNRIIKG 403
>SRP54_MYCPN (P75054) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 ++ V+DG G + I+TKLD A+ G ALS + + P+ +GT Sbjct: 215 ILMVVDGLSGQEIINVAKEFHNRLKLTGFIITKLDSDARAGAALSLTSLLEVPIKLMGTS 274 Query: 258 EHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQ 437 E + + F+ E +R+LG GD+ L++K E + ++ V+K+ G L L Sbjct: 275 EKLTGLEQFHPERIASRILGLGDVMTLVEKAEEVFDKQSLTKTVSKMFLGKMDLEDLLLY 334 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKE-KFKRYMTIMDSMTPAELDSTNPKL 614 + + +MG +S I MLPG L +S E K K + +++SMT E +PKL Sbjct: 335 MEQMNQMGSVSSIVKMLPG---NLTVSDDHVESIEAKVKLWKVLINSMTREE--RRHPKL 389 Query: 615 MTE--SRTIRVARG 650 + SR R+ +G Sbjct: 390 INRDPSRKQRIIKG 403
>SRP54_MYCGE (P47294) Signal recognition particle protein (Fifty-four homolog)| Length = 446 Score = 80.1 bits (196), Expect = 5e-15 Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 2/197 (1%) Frame = +3 Query: 66 NQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIF 245 N +I V+DG G + I++KLD A+ G ALS + + P+ Sbjct: 211 NPDEIIMVVDGLSGQEIINVAQTFHKRLKLTGFIISKLDSDARAGAALSLASLLQVPIKL 270 Query: 246 IGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRL 425 IG E +D + F+ E R+LG GD+ L++K E + ++ ++K+ G L Sbjct: 271 IGVSEKLDGLEQFHPERIANRILGLGDVMSLVEKAEQVFDKKDLTKTISKMFLGKMDLED 330 Query: 426 LYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTN 605 L Q + KMG +S + MLP S + + + + K + + +++SMT E + Sbjct: 331 LLIYMQQMHKMGSVSSLIKMLPANFS--VSEENAELIENKIELWKVLINSMTREE--RRH 386 Query: 606 PKLMTE--SRTIRVARG 650 PKL+ +R R+ +G Sbjct: 387 PKLINRDPNRKQRIIKG 403
>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)| Length = 451 Score = 75.1 bits (183), Expect = 2e-13 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 4/194 (2%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + ++D +G + +I+TK DG ++ G ALS T P+ FIGTGE Sbjct: 218 LLIVDSMMGQDAINMAKIFNNDLLISGIILTKTDGDSRSGIALSMRYITGKPIKFIGTGE 277 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLRLLYEQ 437 I + F+ E R+LG D+ LI+ +E V Q +L KL +G F L Q Sbjct: 278 KIISLEPFHPERIADRILGMNDIMSLIEDIEEKVDQSQIQKLTKKLKKGHDFNLNDFLTQ 337 Query: 438 FQNLLKMGPMSQI---FSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNP 608 + + K+G ++ FS+ S+ + +K + +K + ++ SMTP E P Sbjct: 338 IKQMKKIGGLNYFANKFSINHQLSNNISLLNTDKNTLKKIE---AMICSMTPKE--RIKP 392 Query: 609 KLMTESRTIRVARG 650 ++ SR R+A G Sbjct: 393 IIIKGSRKRRIALG 406
>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 69.7 bits (169), Expect = 7e-12 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 3/192 (1%) Frame = +3 Query: 84 FVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEH 263 FV D G V + I+TK D + G LS TK P+ FIGTGE Sbjct: 219 FVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEK 278 Query: 264 IDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVP---ADQQSELVAKLSEGAFTLRLLYE 434 +++ ++F + +R+LG GD+ LI+ +E+ + + S + K + F LL+ Sbjct: 279 LEELELFYPDRIASRILGMGDMLSLIENIENKIDKKHIKKFSNTIKKYNTFNFNDMLLH- 337 Query: 435 QFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKL 614 + K+G ++ I LP + + Q + + TI++SMT +E P+L Sbjct: 338 -INQIKKIGGVNSILGKLPK-TQTIFNSFQNNIDENILLKMKTIINSMTISE--RHQPEL 393 Query: 615 MTESRTIRVARG 650 + SR R++ G Sbjct: 394 IKGSRKRRISLG 405
>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)| Length = 450 Score = 64.7 bits (156), Expect = 2e-10 Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 3/193 (1%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + ++D +G + +++TK D A+ G ALS T P+ FIGTGE Sbjct: 218 LLIVDSMMGQDAINIAKKFSASLSISGIVITKTDSDARSGVALSIRHITGKPIKFIGTGE 277 Query: 261 HIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEG-AFTLRLLYEQ 437 + + F+ E R+LG + LI +E V Q L K +G F L Q Sbjct: 278 KLHQLEPFHPERIADRILGMNQVISLIKDIEEKVNQSQVKNLTKKFRKGDDFNLNDFLIQ 337 Query: 438 FQNLLKMGPMSQIFSMLPGFSSELMPKGQE--KQSKEKFKRYMTIMDSMTPAELDSTNPK 611 + + MG ++ + FS + ++K R I+ SMT E +P Sbjct: 338 LKEMKNMGNLNY---FIEKFSKNKILSNNPLLGENKNTLNRIEAIIYSMTHKE--RMHPI 392 Query: 612 LMTESRTIRVARG 650 ++ SR R+A G Sbjct: 393 IIKGSRKRRIALG 405
>FTSY_HELPY (O25458) Cell division protein ftsY homolog| Length = 293 Score = 56.2 bits (134), Expect = 8e-08 Identities = 30/91 (32%), Positives = 46/91 (50%) Frame = +3 Query: 42 CAKLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVA 221 C+K+LK ++DG+ G + VI+TKLDG +KGG LS + Sbjct: 197 CSKVLKDA-PFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLY 255 Query: 222 ATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K P++++G GE DD F+ E F+ L+ Sbjct: 256 ELKLPILYLGMGEKEDDLIAFDEERFIEDLV 286
>FTSY_HELPJ (Q9ZL80) Cell division protein ftsY homolog| Length = 293 Score = 56.2 bits (134), Expect = 8e-08 Identities = 30/91 (32%), Positives = 46/91 (50%) Frame = +3 Query: 42 CAKLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVA 221 C+K+LK ++DG+ G + VI+TKLDG +KGG LS + Sbjct: 197 CSKVLKDA-PFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSVLY 255 Query: 222 ATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K P++++G GE DD F+ E F+ L+ Sbjct: 256 ELKLPILYLGMGEKEDDLIAFDEERFIEDLV 286
>FTSY_NEIGO (P14929) Cell division protein ftsY homolog| Length = 416 Score = 54.3 bits (129), Expect = 3e-07 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKS-PVIFIGT 254 +I V+D +IG + +IVTKLDG AK GG L+A+A+ + PV +IG Sbjct: 337 IIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAK-GGILAALASDRPVPVRYIGV 395 Query: 255 GEHIDDFDVFNVEPFVARLL 314 GE IDD F+ FV RLL Sbjct: 396 GEGIDDLRPFDARAFVDRLL 415
>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog| Length = 504 Score = 53.1 bits (126), Expect = 7e-07 Identities = 28/78 (35%), Positives = 39/78 (50%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D ++G + V++TKLDG AKGG AL+ P+ FIG GE Sbjct: 425 LLVLDATLGQNGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVALAVAQQLNLPIRFIGAGE 484 Query: 261 HIDDFDVFNVEPFVARLL 314 I+D F+ FV LL Sbjct: 485 GIEDLRPFSSYEFVEALL 502
>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291| Length = 409 Score = 52.8 bits (125), Expect = 9e-07 Identities = 28/90 (31%), Positives = 43/90 (47%) Frame = +3 Query: 48 KLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAAT 227 K+++ LVIFV D G + +I+TK+D AKGG ALS A Sbjct: 308 KVVRVTKPDLVIFVGDALTGNDAVYQAEEFNRAVNIDGIILTKVDADAKGGAALSIGYAI 367 Query: 228 KSPVIFIGTGEHIDDFDVFNVEPFVARLLG 317 P++++G G+ D F+ + V +L G Sbjct: 368 GKPILYLGVGQRYQDLIEFDADWMVRKLFG 397
>FTSY_AQUAE (O67066) Cell division protein ftsY homolog| Length = 461 Score = 52.4 bits (124), Expect = 1e-06 Identities = 25/78 (32%), Positives = 38/78 (48%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D + G + ++VTKLDG AKGG ++ K P+ +G GE Sbjct: 383 LLVIDATTGQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLVGVGE 442 Query: 261 HIDDFDVFNVEPFVARLL 314 IDD F+ + +V LL Sbjct: 443 GIDDLQPFDADAYVEALL 460
>FTSY_THEAQ (P83749) Cell division protein ftsY| Length = 303 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/79 (39%), Positives = 37/79 (46%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V V+D G + VIVTKLDG AKGG + V K P+ F+G G Sbjct: 223 VWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVG 282 Query: 258 EHIDDFDVFNVEPFVARLL 314 E DD F+ E FV LL Sbjct: 283 EGPDDLQPFDPEAFVEALL 301
>FTSY_NEIMC (O30391) Cell division protein ftsY homolog| Length = 421 Score = 52.0 bits (123), Expect = 2e-06 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKS-PVIFIGT 254 +I V+D +IG + +IVTKLDG AK GG L+A+A+ + PV +IG Sbjct: 342 IIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAK-GGILAALASDRPVPVRYIGV 400 Query: 255 GEHIDDFDVFNVEPFVARLL 314 GE IDD F+ FV LL Sbjct: 401 GEGIDDLRPFDARAFVDALL 420
>FTSY_NEIMB (P57011) Cell division protein ftsY homolog| Length = 421 Score = 52.0 bits (123), Expect = 2e-06 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKS-PVIFIGT 254 +I V+D +IG + +IVTKLDG AK GG L+A+A+ + PV +IG Sbjct: 342 IIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAK-GGILAALASDRPVPVRYIGV 400 Query: 255 GEHIDDFDVFNVEPFVARLL 314 GE IDD F+ FV LL Sbjct: 401 GEGIDDLRPFDARAFVDALL 420
>FTSY_NEIMA (P57010) Cell division protein ftsY homolog| Length = 421 Score = 52.0 bits (123), Expect = 2e-06 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKS-PVIFIGT 254 +I V+D +IG + +IVTKLDG AK GG L+A+A+ + PV +IG Sbjct: 342 IIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAK-GGILAALASDRPVPVRYIGV 400 Query: 255 GEHIDDFDVFNVEPFVARLL 314 GE IDD F+ FV LL Sbjct: 401 GEGIDDLRPFDARAFVDALL 420
>FTSY_RICPR (O05948) Cell division protein ftsY homolog| Length = 303 Score = 51.2 bits (121), Expect = 3e-06 Identities = 29/79 (36%), Positives = 37/79 (46%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I ++D G + +IVTKLDG AK G + AV PV FIG GE Sbjct: 224 ILIIDAITGQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIGIGE 283 Query: 261 HIDDFDVFNVEPFVARLLG 317 I+D +FN F L+G Sbjct: 284 KIEDLKIFNRHDFSRSLVG 302
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 50.8 bits (120), Expect = 3e-06 Identities = 27/77 (35%), Positives = 39/77 (50%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 I ++D G AVI+TK+D AKGG ALS K PV+++G G+ Sbjct: 290 ILILDSLAGSDALEQARHFENNVGYDAVILTKVDADAKGGIALSLAYELKKPVVYMGVGQ 349 Query: 261 HIDDFDVFNVEPFVARL 311 + DD F+ + FV R+ Sbjct: 350 NYDDLIPFSPDWFVERI 366
>FTSY_MYCGE (P47539) Cell division protein ftsY homolog| Length = 346 Score = 49.3 bits (116), Expect = 1e-05 Identities = 26/83 (31%), Positives = 41/83 (49%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+DG++G + +++TK+DG AKGG L+ PV IG GE Sbjct: 259 LLVLDGTVGQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGGIILAIKDMFNLPVKLIGFGE 318 Query: 261 HIDDFDVFNVEPFVARLLGRGDL 329 D +F++E +V LL +L Sbjct: 319 KTSDLAIFDLEKYVLGLLNNLNL 341
>FTSY_ECOLI (P10121) Cell division protein ftsY| Length = 497 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/83 (31%), Positives = 36/83 (43%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ +D S G + + +TKLDG AKGG S P+ +IG G Sbjct: 415 VMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVG 474 Query: 258 EHIDDFDVFNVEPFVARLLGRGD 326 E I+D F + F+ L R D Sbjct: 475 ERIEDLRPFKADDFIEALFARED 497
>FTSY_MYCTU (P66842) Cell division protein ftsY homolog| Length = 422 Score = 46.2 bits (108), Expect = 8e-05 Identities = 27/80 (33%), Positives = 34/80 (42%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D +IG + ++TKLDG AKGG PV +G G Sbjct: 343 VLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLG 402 Query: 258 EHIDDFDVFNVEPFVARLLG 317 E DD F FV LLG Sbjct: 403 EGPDDLAPFEPAAFVDALLG 422
>FTSY_MYCBO (P66843) Cell division protein ftsY homolog| Length = 422 Score = 46.2 bits (108), Expect = 8e-05 Identities = 27/80 (33%), Positives = 34/80 (42%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D +IG + ++TKLDG AKGG PV +G G Sbjct: 343 VLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLG 402 Query: 258 EHIDDFDVFNVEPFVARLLG 317 E DD F FV LLG Sbjct: 403 EGPDDLAPFEPAAFVDALLG 422
>FTSY_HAEIN (P44870) Cell division protein ftsY homolog| Length = 414 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/78 (29%), Positives = 35/78 (44%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 ++ +D G + + +TKLDG AKGG + K P+ +IG G Sbjct: 331 IMLTLDAGTGQNAISQAKLFNEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGVG 390 Query: 258 EHIDDFDVFNVEPFVARL 311 E I+D FN + F+ L Sbjct: 391 EKIEDLREFNAKEFIEAL 408
>FTSY_BACSU (P51835) Cell division protein ftsY homolog| Length = 329 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/75 (32%), Positives = 34/75 (45%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ +D + G V + +TKLDG AKGG L+ PV +G G Sbjct: 242 VLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLG 301 Query: 258 EHIDDFDVFNVEPFV 302 E +DD F+ E +V Sbjct: 302 EKVDDLQEFDPESYV 316
>FTSY_BUCBP (Q89B28) Cell division protein ftsY homolog| Length = 397 Score = 45.4 bits (106), Expect = 1e-04 Identities = 27/83 (32%), Positives = 35/83 (42%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D IG V +++TKLD AKGG S PV +I GE Sbjct: 314 MLVLDACIGQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFSIAQEFLIPVRYISFGE 373 Query: 261 HIDDFDVFNVEPFVARLLGRGDL 329 +D VFN FV +L L Sbjct: 374 DFEDIQVFNSNIFVNAILSNNTL 396
>FTSY_BUCAI (P57137) Cell division protein ftsY homolog| Length = 378 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/74 (29%), Positives = 34/74 (45%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + ++D G + +I+TKLDG AKGG S + P+ +IG GE Sbjct: 300 LLIIDSCNGQNTIQQTEIFHKALNLTGIIITKLDGTAKGGVVFSLADQFQIPIRYIGIGE 359 Query: 261 HIDDFDVFNVEPFV 302 + D FN + F+ Sbjct: 360 KMQDLGHFNSQEFI 373
>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog| Length = 351 Score = 42.0 bits (97), Expect = 0.002 Identities = 22/75 (29%), Positives = 33/75 (44%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 ++ ++D G + +++TKLDG AKGG S P+ +IG G Sbjct: 271 IMLIIDACNGQNTIKQTEMFHKAINLTGLVITKLDGTAKGGVIFSLANQFLIPIRYIGIG 330 Query: 258 EHIDDFDVFNVEPFV 302 E D VFN F+ Sbjct: 331 EKTTDLVVFNSNDFI 345
>FTSY_MYCLE (O33010) Cell division protein ftsY homolog| Length = 430 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/79 (32%), Positives = 33/79 (41%) Frame = +3 Query: 78 VIFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTG 257 V+ V+D +IG + ++TKLDG AKGG PV +G G Sbjct: 351 VLLVLDATIGQNGLTQVRVFAEVVDITGAVLTKLDGTAKGGIVFRIQRELGVPVKLVGLG 410 Query: 258 EHIDDFDVFNVEPFVARLL 314 E DD F FV LL Sbjct: 411 EGPDDLAPFEPAVFVDALL 429
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog| (SR-alpha) (Docking protein alpha) (DP-alpha) (GTP-binding protein) Length = 614 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 11/101 (10%) Frame = +3 Query: 45 AKLLKQRNQXLVIFVMDGSIGXXXXXXXXXXXXXXX----------VGAVIVTKLDG-HA 191 +KL+K N LV+FV + +G + +++TK D Sbjct: 513 SKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDD 572 Query: 192 KGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K G A+S T P++F+GTG+ D NV V L+ Sbjct: 573 KVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLM 613
>FTSY_MYCPN (P75362) Cell division protein ftsY homolog| Length = 348 Score = 40.4 bits (93), Expect = 0.005 Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+DG+ G + +I+TK+D +KGG L+ PV IG GE Sbjct: 259 LLVLDGTTGQSGLAQAKVFNEFTELTGIILTKMDSSSKGGIILAIKDLFNLPVKLIGFGE 318 Query: 261 HIDDFDVFNVEPFVARL 311 D F++E +V L Sbjct: 319 TTADLAAFDLEQYVLGL 335
>FTSY_MYCHO (O32861) Cell division protein ftsY homolog| Length = 351 Score = 38.9 bits (89), Expect = 0.013 Identities = 20/74 (27%), Positives = 36/74 (48%) Frame = +3 Query: 81 IFVMDGSIGXXXXXXXXXXXXXXXVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGE 260 + V+D + G + +I+TK+DG +KGG L+ V +IG GE Sbjct: 269 LLVLDATTGQNGVIQARVFKESTPLTGIILTKMDGTSKGGIVLTIKDEIGLFVKYIGLGE 328 Query: 261 HIDDFDVFNVEPFV 302 +DD F+++ ++ Sbjct: 329 KVDDLAEFDLDSYI 342
>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 636 Score = 37.7 bits (86), Expect = 0.030 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 11/101 (10%) Frame = +3 Query: 45 AKLLKQRNQXLVIFVMDGSIGXXXX----------XXXXXXXXXXXVGAVIVTKLDG-HA 191 AKL+ LV+FV + +G + +++TK D Sbjct: 534 AKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDD 593 Query: 192 KGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K G A+S T P++F+GTG+ D N + VA L+ Sbjct: 594 KVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 634
>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 37.7 bits (86), Expect = 0.030 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 11/101 (10%) Frame = +3 Query: 45 AKLLKQRNQXLVIFVMDGSIGXXXX----------XXXXXXXXXXXVGAVIVTKLDG-HA 191 AKL+ LV+FV + +G + +++TK D Sbjct: 536 AKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDD 595 Query: 192 KGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K G A+S T P++F+GTG+ D N + VA L+ Sbjct: 596 KVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 636
>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit| (SR-alpha) (Docking protein alpha) (DP-alpha) Length = 638 Score = 37.7 bits (86), Expect = 0.030 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 11/101 (10%) Frame = +3 Query: 45 AKLLKQRNQXLVIFVMDGSIGXXXX----------XXXXXXXXXXXVGAVIVTKLDG-HA 191 AKL+ LV+FV + +G + +++TK D Sbjct: 536 AKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDD 595 Query: 192 KGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 314 K G A+S T P++F+GTG+ D N + VA L+ Sbjct: 596 KVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 636
>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 35.8 bits (81), Expect = 0.11 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = +2 Query: 95 WQHWSGCL*SGTGIQTECFRWCCDCHEIGWSCEG-----RRCTERGC 220 W HWSGC S G R C G CEG RRC+E+ C Sbjct: 461 WGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRC 507
>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor| Length = 1522 Score = 35.0 bits (79), Expect = 0.19 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = +2 Query: 95 WQHWSGCL*SGTGIQTECFRWCCDCHEIGWSCEG-----RRCTERGC 220 W HWSGC S G R C G CEG RRC+E+ C Sbjct: 461 WGHWSGCSKSCDGGWERRIRTCQGAVITGQQCEGTGEEVRRCSEQRC 507
>FLHF_TREPA (Q56339) Flagellar biosynthesis protein flhF (Flagella-associated| GTP-binding protein) Length = 437 Score = 32.7 bits (73), Expect = 0.96 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +3 Query: 159 AVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHI-DDFDVFNVEPFVARLLG 317 A+IVTKLD G +SA++ ++P+ +I TG+ + + + +V +++L G Sbjct: 364 ALIVTKLDETTSIGNLISALSEARTPITYITTGQTVPSNLEKASVNLLLSKLKG 417
>GDE_CANFA (Q2PQH8) Glycogen debranching enzyme (Glycogen debrancher)| [Includes: 4-alpha-glucanotransferase (EC 2.4.1.25) (Oligo-1,4-1,4-glucantransferase); Amylo-alpha-1,6-glucosidase (EC 3.2.1.33) (Amylo-1,6-glucosidase) (Dextrin 6-alpha-D-glucosidase)] Length = 1533 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +3 Query: 177 LDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGD 326 L G+ K GG V P++++G H+ D ++ F+A+ LG D Sbjct: 96 LQGNEKSGGGYIVV----DPILYVGADNHVLPLDCVTLQTFLAKCLGPFD 141
>PEL6_ARATH (O64510) Probable pectate lyase 6 precursor (EC 4.2.2.2)| Length = 455 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +2 Query: 41 MRQVAEATKPXPGDICDGWQHWSGCL*SGTGIQTECFRWCCDCHEIGWSCEGRRCTERGC 220 +R+ E+ P P ++ D + + + TGI E R D ++G G++ T RG Sbjct: 42 LRETLESYDPNPENVTDHFNYHAALAMETTGIVNETRR---DLRQVG---RGKKTTRRGG 95 Query: 221 SYEKPGDIHWNWR 259 +E I WR Sbjct: 96 RFESLNAIDKCWR 108
>SYS_GEOSL (Q74H55) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 422 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%) Frame = -1 Query: 308 TGDEWFHVKNVKIINVFSSSNEYHRAFRSCNRAQCTASLRMTIQFRDN--------HSTN 153 TGD F I V+ E +R SC+ + S R +I+FR++ H+ N Sbjct: 322 TGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLN 381 Query: 152 GSTL 141 GS L Sbjct: 382 GSGL 385
>MASK_XENLA (Q9PTG8) CPEB-associated factor Maskin (Cytoplasmic polyadenylation| element-binding protein-associated factor Maskin) Length = 931 Score = 30.4 bits (67), Expect = 4.8 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 9/65 (13%) Frame = +3 Query: 252 TGEHIDDFDVFN-VEPFVAR--LLG---RGDLPGLIDKMES---IVPADQQSELVAKLSE 404 TG + DFD F+ + PF ++ +L + DLP L + +E+ +VPAD+ S+ + L+ Sbjct: 127 TGAYSIDFDNFDDINPFKSKTQMLNSPIKADLPSLTENIETTTPVVPADEASKQMVSLNL 186 Query: 405 GAFTL 419 A L Sbjct: 187 SAANL 191
>TOLB_VIBPA (Q87QT9) Protein tolB precursor| Length = 450 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 464 NEPDLLHAAWV*LGVDAKRTGETKQRKVQAVHDNYGLHDTCRAR 595 NE ++ +W LGVDA TG KQ + NY L D R + Sbjct: 83 NESEVNFDSWTSLGVDALLTGSIKQNEQGDYVVNYQLVDVVRGQ 126
>TRPC5_MOUSE (Q9QX29) Short transient receptor potential channel 5 (TrpC5)| (Transient receptor protein 5) (Mtrp5) (trp-related protein 5) (Capacitative calcium entry channel 2) (CCE2) Length = 975 Score = 25.0 bits (53), Expect(2) = 7.5 Identities = 8/30 (26%), Positives = 18/30 (60%) Frame = -1 Query: 512 HQLRAKPRQHGEDLAHWSHFQKILELLIQK 423 H LR+ +H + L H+Q+++ L+++ Sbjct: 694 HNLRSFTERHADSLIQNQHYQEVIRNLVKR 723 Score = 23.1 bits (48), Expect(2) = 7.5 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -1 Query: 650 PSSDPDGSRLGHQLR 606 P DPDG R H LR Sbjct: 683 PKRDPDGRRRRHNLR 697
>TRPC5_RABIT (O62852) Short transient receptor potential channel 5 (TrpC5)| (Rtrp5) (Capacitative calcium entry channel 2) (CCE2) Length = 974 Score = 25.0 bits (53), Expect(2) = 7.5 Identities = 8/30 (26%), Positives = 18/30 (60%) Frame = -1 Query: 512 HQLRAKPRQHGEDLAHWSHFQKILELLIQK 423 H LR+ +H + L H+Q+++ L+++ Sbjct: 694 HNLRSFTERHADSLIQNQHYQEVIRNLVKR 723 Score = 23.1 bits (48), Expect(2) = 7.5 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -1 Query: 650 PSSDPDGSRLGHQLR 606 P DPDG R H LR Sbjct: 683 PKRDPDGRRRRHNLR 697
>HRC2_XANCV (P80150) Protein hrpC2| Length = 645 Score = 29.6 bits (65), Expect = 8.1 Identities = 14/55 (25%), Positives = 30/55 (54%) Frame = +3 Query: 324 DLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSML 488 D PGL+ ++ +PA + ++++ +L E +R + ++L+ GP + ML Sbjct: 471 DYPGLVAEVNKAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLML 525
>HRCV_RALSO (P35656) Hypersensitivity response secretion protein hrcV| Length = 690 Score = 29.6 bits (65), Expect = 8.1 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = +3 Query: 324 DLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSML 488 D PGL+ + + VPA + ++++ +L E +R + ++L+ GP + ML Sbjct: 513 DYPGLVAEAQKAVPAQRIADVLRRLLEEQVPIRNMRAILESLVVWGPKEKDTLML 567
>SYS_AQUAE (O66647) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 425 Score = 29.6 bits (65), Expect = 8.1 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Frame = -1 Query: 308 TGDEWFHVKNVKIINVFSSSNEYHRAFRSCNRAQCTASLRMTIQFRDN--------HSTN 153 TGD F I V+ S +R SC+ + + RM +F+D+ H+ N Sbjct: 324 TGDLGFSAAKTYDIEVWFPSQNKYREISSCSNCEDFQARRMNTRFKDSKTGKNRFVHTLN 383 Query: 152 GSTL 141 GS L Sbjct: 384 GSGL 387
>KIN20_CAEEL (Q20471) Casein kinase I isoform delta (EC 2.7.11.1) (Protein| kinase 20) Length = 497 Score = 29.6 bits (65), Expect = 8.1 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -3 Query: 219 QPRSVHRLPSHDHPIS*QSQHQRKHSV*MPVPDQRQPDQCCHPSQ 85 QPR +H P PI QHQ+ P+ Q QP Q HP+Q Sbjct: 73 QPRLLHNFPVIPPPIQ---QHQQP-----PLLQQAQPSQIPHPTQ 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,027,473 Number of Sequences: 219361 Number of extensions: 1956385 Number of successful extensions: 6345 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 6003 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6271 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
