ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baall02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168
2gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, comple... 482 e-133
3gb|AY103565.1| Zea mays PCO067369 mRNA sequence 418 e-114
4gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome... 311 2e-81
5gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome... 311 2e-81
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 311 2e-81
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 311 2e-81
8ref|NM_105195.2| Arabidopsis thaliana translation initiation fac... 174 2e-40
9gb|AY056181.1| Arabidopsis thaliana unknown protein (At1g65220) ... 174 2e-40
10gb|BT006174.1| Arabidopsis thaliana clone RAFL09-89-P13 (R20012)... 174 2e-40
11emb|BX814895.1|CNS0AEMB Arabidopsis thaliana Full-length cDNA Co... 174 2e-40
12gb|AY086089.1| Arabidopsis thaliana clone 21223 mRNA, complete s... 174 2e-40
13ref|NM_123014.2| Arabidopsis thaliana translation initiation fac... 168 1e-38
14gb|AY136473.1| Arabidopsis thaliana putative protein (At5g36230)... 168 1e-38
15gb|AY057642.1| Arabidopsis thaliana AT5g36230/T30G6_9 mRNA, comp... 168 1e-38
16dbj|AB026661.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 88 4e-14
17gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 ... 70 1e-08
18gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 64 6e-07
19ref|XM_676701.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.56
20gb|CP000097.1| Synechococcus sp. CC9902, complete genome 42 2.2
21gb|AY805220.1| Homo sapiens paraoxonase 3 (PON3) gene, complete cds 42 2.2
22gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete seq... 42 2.2
23gb|AE006246.1| Lactococcus lactis subsp. lactis IL1403 section 8... 42 2.2
24gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, compl... 42 2.2
25gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complet... 42 2.2
26emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chr... 42 2.2
27emb|AL451125.7| Human DNA sequence from clone RP11-474P12 on chr... 42 2.2
28gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosom... 42 2.2
29gb|DQ334278.1| Tupaia minor clone JS132 microsatellite sequence 42 2.2
30gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromos... 42 2.2
31gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosom... 40 8.7
32gb|AF168099.1| Tauraco persa cytochrome oxidase III gene, partia... 40 8.7
33gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, co... 40 8.7
34emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 ... 40 8.7
35gb|BC042536.1| Homo sapiens retinal G protein coupled receptor, ... 40 8.7
36emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chro... 40 8.7
37emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 o... 40 8.7
38emb|AL954346.7| Mouse DNA sequence from clone RP23-298H6 on chro... 40 8.7
39gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosom... 40 8.7
40gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, comp... 40 8.7
41gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell... 40 8.7
42ref|NM_140915.3| Drosophila melanogaster CG14183-RA (CG14183), mRNA 40 8.7
43gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complet... 40 8.7
44gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, com... 40 8.7
45gb|AY058318.1| Drosophila melanogaster GH08353 full length cDNA 40 8.7
46gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosom... 40 8.7
47dbj|AK047328.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 8.7
48dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
50dbj|AP006741.1| Gallus sonneratii mitochondrial DNA, complete ge... 40 8.7
51gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome... 40 8.7
52gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, comple... 40 8.7
53dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
54emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chro... 40 8.7
55dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
56gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70... 40 8.7
57dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.7
58emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chr... 40 8.7
59dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.7
60emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on ch... 40 8.7
61gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 ma... 40 8.7
62dbj|AK116020.1| Ciona intestinalis cDNA, clone:citb004k05, full ... 40 8.7
63gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, comp... 40 8.7
64gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
65emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119... 40 8.7
66gb|U14911.1|HSRGR1 Human RPE-retinal G protein coupled receptor ... 40 8.7
67emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chro... 40 8.7

>dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full
           insert sequence
          Length = 1609

 Score =  599 bits (302), Expect = e-168
 Identities = 477/536 (88%)
 Strand = Plus / Plus

                                                                       
Query: 104 tgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagc 163
           |||||||||||||||||||||||||||| || || ||||||||| ||||||||||||| |
Sbjct: 134 tgtttatgagctcgaaggagaagcccactcttggaggccagcggattaagacccgcaaac 193

                                                                       
Query: 164 ggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatc 223
           ||||||| || ||||||||||| ||| | || ||||||||||||||||||||||||||||
Sbjct: 194 ggaatattgctgctcctttggaccctgcatcattctctgatgcaattgtccagatttatc 253

                                                                       
Query: 224 tggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaact 283
           |||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||
Sbjct: 254 tggataatgctggagacctggaacttgttgccaaaagtatcgagtcctcggatctcaact 313

                                                                       
Query: 284 tctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactcagcctg 343
           |||||||||||||||||||||| ||||||||||| |||||||| | ||| ||||||||||
Sbjct: 314 tctcacgttacggtgacaccttttttgaggttgtattcattggagggcgcactcagcctg 373

                                                                       
Query: 344 gtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactgttcag 403
           | || || ||||| || ||||| |||||||| |||||||||||| |  |||| ||| |||
Sbjct: 374 gcacaataaaacctgaggaagaaggagagcgtcacccctattctgtacttgattgtgcag 433

                                                                       
Query: 404 cacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcaggaggc 463
           | || ||||||||||| || |||| ||| ||||  |||||||||||| ||||||||||||
Sbjct: 434 cgcagcgtgaagcaattttgccttctgttctctacattcagaaaacattgcgcaggaggc 493

                                                                       
Query: 464 ctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttggagttct 523
           ||||||| ||||||| |||||||||||||||||| ||||| || |||||  |||||||||
Sbjct: 494 ctttcttgataaagaatcttgaaaatgttatgcgcaaattccttcagtcactggagttct 553

                                                                       
Query: 524 ttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaat 583
           | ||||||||||||||  ||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 554 tcgaagaaaatgagaggaagaaacttgccattttcacagcacttgccttttctcagaagt 613

                                                                   
Query: 584 tatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 639
           |||||||||| ||||||||||||||||| |||||| |||| ||||| |||||||||
Sbjct: 614 tatcaggtcttccacctgaaactgtcttccagccactgctcaaggataatcttgtt 669



to top

>gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, complete sequence
          Length = 1627

 Score =  482 bits (243), Expect = e-133
 Identities = 468/543 (86%), Gaps = 3/543 (0%)
 Strand = Plus / Minus

                                                                        
Query: 99   atcgttgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccg 158
            ||||||||||||||||||||||||||||||||| || || |||  |||| ||||||||||
Sbjct: 1565 atcgttgtttatgagctcgaaggagaagcccactcttggaggcacgcggattaagacccg 1506

                                                                        
Query: 159  caagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagat 218
            ||||||||| || |||||||||||||| ||| | || ||||||||||||||||| |||||
Sbjct: 1505 caagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgttcagat 1446

                                                                        
Query: 219  ttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatct 278
            |||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct: 1445 ttatctggataatggtggagatctggaacttgtcgccaaaagtatcgagtcctcagacct 1386

                                                                        
Query: 279  caacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactca 338
            |||||||||||||||||||||||| || || ||||| |||||  |||| | ||| |||||
Sbjct: 1385 caacttctcacgttacggtgacacttttttcgaggtggtttttgttggagggcgcactca 1326

                                                                        
Query: 339  gcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactg 398
            |||||| || || ||||| ||||||   ||||| || ||||| |||||| |  | || ||
Sbjct: 1325 gcctggcactataaaacctgaagaa---ggagaccgccacccttattctgtgttagattg 1269

                                                                        
Query: 399  ttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcag 458
            | ||||||| |||||| |||| || ||||  || |||| ||| ||||||||| |||||||
Sbjct: 1268 tgcagcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgcag 1209

                                                                        
Query: 459  gaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttgga 518
            |||||||||||||||||||| |||||||||||||||||| ||||| ||||| || |||||
Sbjct: 1208 gaggcctttcttaataaagaatcttgaaaatgttatgcgcaaattcctccaatctttgga 1149

                                                                        
Query: 519  gttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctca 578
            |||||||||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||
Sbjct: 1148 gttctttgaagaaaatgagagaaagaaactcgccatattcactgcccttgcattttctca 1089

                                                                        
Query: 579  gaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgt 638
            |||  ||||||| || || ||||| || || || |||||| |||| ||||| ||||||||
Sbjct: 1088 gaagctatcagggcttcctcctgagacagtgttccagccactgctcaaggataatcttgt 1029

               
Query: 639  tgc 641
            |||
Sbjct: 1028 tgc 1026



to top

>gb|AY103565.1| Zea mays PCO067369 mRNA sequence
          Length = 1771

 Score =  418 bits (211), Expect = e-114
 Identities = 460/543 (84%), Gaps = 3/543 (0%)
 Strand = Plus / Plus

                                                                       
Query: 99  atcgttgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccg 158
           ||||||||||||||||||||||||||||||||| || || |||  |||| ||||||||||
Sbjct: 140 atcgttgtttatgagctcgaaggagaagcccactcttggaggcacgcggattaagacccg 199

                                                                       
Query: 159 caagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagat 218
           ||||||||| || |||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 200 caagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgtccagat 259

                                                                       
Query: 219 ttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatct 278
           |||||||||||||| ||||||||||||||| || ||||||||||| ||||| || || ||
Sbjct: 260 ttatctggataatggtggagatctggaactcgtcgccaaaagtattgagtcttccgacct 319

                                                                       
Query: 279 caacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactca 338
           ||||||||||||||||||||||||||| |||||||| |||||  |||| |  || |||||
Sbjct: 320 caacttctcacgttacggtgacaccttttttgaggtggtttttgttggaggacgcactca 379

                                                                       
Query: 339 gcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactg 398
           |||||| ||  | ||||| ||||||   ||||| || ||||| |||||| |  | || ||
Sbjct: 380 gcctggcactgtaaaacctgaagaa---ggagaccgccacccttattctatgttagattg 436

                                                                       
Query: 399 ttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcag 458
           |   ||||| |||||| |||| || ||||  || |||| ||| ||||||||| |||||||
Sbjct: 437 tgtggcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgcag 496

                                                                       
Query: 459 gaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttgga 518
           |||||||||||||||||| | |||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 497 gaggcctttcttaataaaaaatcttgaaaatgttatgcgcaaattcctccaatccttgga 556

                                                                       
Query: 519 gttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctca 578
           ||||||||| |||||||||||  ||||||| ||||| ||||| || ||||||||||||||
Sbjct: 557 gttctttgaggaaaatgagaggaagaaactcgccatattcacagcccttgcattttctca 616

                                                                       
Query: 579 gaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgt 638
            ||  | ||||| || || || || || || || ||||||||||| ||||| ||||| ||
Sbjct: 617 aaagctgtcagggcttcctccggagacagtgttccagccattgctcaaggataatctggt 676

              
Query: 639 tgc 641
           |||
Sbjct: 677 tgc 679



to top

>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01,
             complete sequence
          Length = 182504

 Score =  311 bits (157), Expect = 2e-81
 Identities = 286/329 (86%)
 Strand = Plus / Plus

                                                                         
Query: 311   aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370
             ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 90027 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 90086

                                                                         
Query: 371   agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430
             |||| |||||||||||| |  |||| ||| |||| || ||||||||||| || |||| ||
Sbjct: 90087 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 90146

                                                                         
Query: 431   tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490
             | ||||  |||||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 90147 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 90206

                                                                         
Query: 491   ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550
             ||||||| ||||| || |||||  |||||||||| ||||||||||||||  |||||||||
Sbjct: 90207 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 90266

                                                                         
Query: 551   ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610
             |||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 90267 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 90326

                                          
Query: 611   ttcagccattgcttaaggacaatcttgtt 639
             | |||||| |||| ||||| |||||||||
Sbjct: 90327 tccagccactgctcaaggataatcttgtt 90355



 Score =  141 bits (71), Expect = 3e-30
 Identities = 97/106 (91%)
 Strand = Plus / Plus

                                                                         
Query: 139   ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198
             ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || |||
Sbjct: 88710 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 88769

                                                           
Query: 199   tctgatgcaattgtccagatttatctggataatgctggagatctgg 244
             ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 88770 tctgatgcaattgtccagatttatctggataatgctggagacctgg 88815



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                         
Query: 243   ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
             ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 89352 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 89411

                         
Query: 303   cttctttgaggt 314
             ||| ||||||||
Sbjct: 89412 cttttttgaggt 89423



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   agctcgaaggagaagcccac 131
             ||||||||||||||||||||
Sbjct: 87775 agctcgaaggagaagcccac 87794



to top

>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20
              map near S6115, complete sequence
          Length = 139249

 Score =  311 bits (157), Expect = 2e-81
 Identities = 286/329 (86%)
 Strand = Plus / Minus

                                                                          
Query: 311    aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370
              ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 138671 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 138612

                                                                          
Query: 371    agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430
              |||| |||||||||||| |  |||| ||| |||| || ||||||||||| || |||| ||
Sbjct: 138611 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 138552

                                                                          
Query: 431    tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490
              | ||||  |||||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 138551 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 138492

                                                                          
Query: 491    ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550
              ||||||| ||||| || |||||  |||||||||| ||||||||||||||  |||||||||
Sbjct: 138491 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 138432

                                                                          
Query: 551    ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610
              |||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 138431 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 138372

                                           
Query: 611    ttcagccattgcttaaggacaatcttgtt 639
              | |||||| |||| ||||| |||||||||
Sbjct: 138371 tccagccactgctcaaggataatcttgtt 138343



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  311 bits (157), Expect = 2e-81
 Identities = 286/329 (86%)
 Strand = Plus / Minus

                                                                            
Query: 311      aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370
                ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 12078045 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12077986

                                                                            
Query: 371      agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430
                |||| |||||||||||| |  |||| ||| |||| || ||||||||||| || |||| ||
Sbjct: 12077985 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12077926

                                                                            
Query: 431      tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490
                | ||||  |||||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 12077925 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12077866

                                                                            
Query: 491      ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550
                ||||||| ||||| || |||||  |||||||||| ||||||||||||||  |||||||||
Sbjct: 12077865 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12077806

                                                                            
Query: 551      ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610
                |||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 12077805 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12077746

                                             
Query: 611      ttcagccattgcttaaggacaatcttgtt 639
                | |||||| |||| ||||| |||||||||
Sbjct: 12077745 tccagccactgctcaaggataatcttgtt 12077717



 Score =  141 bits (71), Expect = 3e-30
 Identities = 97/106 (91%)
 Strand = Plus / Minus

                                                                            
Query: 139      ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198
                ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || |||
Sbjct: 12079362 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 12079303

                                                              
Query: 199      tctgatgcaattgtccagatttatctggataatgctggagatctgg 244
                ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12079302 tctgatgcaattgtccagatttatctggataatgctggagacctgg 12079257



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 243      ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
                ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 12078720 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12078661

                            
Query: 303      cttctttgaggt 314
                ||| ||||||||
Sbjct: 12078660 cttttttgaggt 12078649



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      agctcgaaggagaagcccac 131
                ||||||||||||||||||||
Sbjct: 12080297 agctcgaaggagaagcccac 12080278



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  311 bits (157), Expect = 2e-81
 Identities = 286/329 (86%)
 Strand = Plus / Minus

                                                                            
Query: 311      aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370
                ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| ||||
Sbjct: 12157352 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12157293

                                                                            
Query: 371      agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430
                |||| |||||||||||| |  |||| ||| |||| || ||||||||||| || |||| ||
Sbjct: 12157292 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12157233

                                                                            
Query: 431      tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490
                | ||||  |||||||||||| ||||||||||||||||||| ||||||| |||||||||||
Sbjct: 12157232 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12157173

                                                                            
Query: 491      ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550
                ||||||| ||||| || |||||  |||||||||| ||||||||||||||  |||||||||
Sbjct: 12157172 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12157113

                                                                            
Query: 551      ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610
                |||||||||| |||||||| ||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 12157112 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12157053

                                             
Query: 611      ttcagccattgcttaaggacaatcttgtt 639
                | |||||| |||| ||||| |||||||||
Sbjct: 12157052 tccagccactgctcaaggataatcttgtt 12157024



 Score =  141 bits (71), Expect = 3e-30
 Identities = 97/106 (91%)
 Strand = Plus / Minus

                                                                            
Query: 139      ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198
                ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || |||
Sbjct: 12158669 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 12158610

                                                              
Query: 199      tctgatgcaattgtccagatttatctggataatgctggagatctgg 244
                ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12158609 tctgatgcaattgtccagatttatctggataatgctggagacctgg 12158564



 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 243      ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
                ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 12158027 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12157968

                            
Query: 303      cttctttgaggt 314
                ||| ||||||||
Sbjct: 12157967 cttttttgaggt 12157956



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      agctcgaaggagaagcccac 131
                ||||||||||||||||||||
Sbjct: 12159604 agctcgaaggagaagcccac 12159585



to top

>ref|NM_105195.2| Arabidopsis thaliana translation initiation factor AT1G65220 mRNA,
           complete cds
          Length = 1500

 Score =  174 bits (88), Expect = 2e-40
 Identities = 188/222 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           |||||||||||| |||||||||||||| ||||| ||   |||| |||||||||||||  |
Sbjct: 90  gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 149

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| | || ||| |  | || ||||||||| | || |||||||||||
Sbjct: 150 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 209

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
           |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || ||
Sbjct: 210 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 269

                                                     
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326
           |||| | |||||||| |  |||||||||||||||||||||||
Sbjct: 270 ctcaagatacggtgatattttctttgaggttgttttcattgg 311



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582
           ||||| || ||||||||  |||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 505 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 564

                                                                      
Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641
            | |||||  | ||  | || |||||||| ||||||||||||||||| | |||||||||
Sbjct: 565 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 623



to top

>gb|AY056181.1| Arabidopsis thaliana unknown protein (At1g65220) mRNA, complete cds
          Length = 1477

 Score =  174 bits (88), Expect = 2e-40
 Identities = 188/222 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           |||||||||||| |||||||||||||| ||||| ||   |||| |||||||||||||  |
Sbjct: 67  gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| | || ||| |  | || ||||||||| | || |||||||||||
Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
           |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || ||
Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246

                                                     
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326
           |||| | |||||||| |  |||||||||||||||||||||||
Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582
           ||||| || ||||||||  |||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541

                                                                      
Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641
            | |||||  | ||  | || |||||||| ||||||||||||||||| | |||||||||
Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600



to top

>gb|BT006174.1| Arabidopsis thaliana clone RAFL09-89-P13 (R20012) unknown protein
           (At1g65220) mRNA, complete cds
          Length = 1469

 Score =  174 bits (88), Expect = 2e-40
 Identities = 188/222 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           |||||||||||| |||||||||||||| ||||| ||   |||| |||||||||||||  |
Sbjct: 67  gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| | || ||| |  | || ||||||||| | || |||||||||||
Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
           |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || ||
Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246

                                                     
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326
           |||| | |||||||| |  |||||||||||||||||||||||
Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582
           ||||| || ||||||||  |||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541

                                                                      
Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641
            | |||||  | ||  | || |||||||| ||||||||||||||||| | |||||||||
Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600



to top

>emb|BX814895.1|CNS0AEMB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS17ZA05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1437

 Score =  174 bits (88), Expect = 2e-40
 Identities = 188/222 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           |||||||||||| |||||||||||||| ||||| ||   |||| |||||||||||||  |
Sbjct: 65  gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| | || ||| |  | || ||||||||| | || |||||||||||
Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
           |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || ||
Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244

                                                     
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326
           |||| | |||||||| |  |||||||||||||||||||||||
Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286



to top

>gb|AY086089.1| Arabidopsis thaliana clone 21223 mRNA, complete sequence
          Length = 1456

 Score =  174 bits (88), Expect = 2e-40
 Identities = 188/222 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           |||||||||||| |||||||||||||| ||||| ||   |||| |||||||||||||  |
Sbjct: 65  gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| | || ||| |  | || ||||||||| | || |||||||||||
Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
           |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || ||
Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244

                                                     
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326
           |||| | |||||||| |  |||||||||||||||||||||||
Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582
           ||||| || ||||||||  |||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 480 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 539

                                                                      
Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641
            | |||||  | ||  | || |||||||| ||||||||||||||||| | |||||||||
Sbjct: 540 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 598



to top

>ref|NM_123014.2| Arabidopsis thaliana translation initiation factor AT5G36230 mRNA,
           complete cds
          Length = 1600

 Score =  168 bits (85), Expect = 1e-38
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           ||||||||||||||||||||| ||||| ||||| ||   |||| ||||||||||||| ||
Sbjct: 132 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 191

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| |||| ||| |  | || ||||||||| | ||||||||||| | 
Sbjct: 192 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 251

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
            ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 252 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 311

                                                  
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323
           | || | || ||||||| ||||||||||||| |||||||
Sbjct: 312 cacaagatatggtgacatcttctttgaggttattttcat 350



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501
           |||||||  ||||| |||| ||||||| | |||||||  |||||||||||||  || | |
Sbjct: 466 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 525

                                                                       
Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561
           || || |||||  ||||| | ||||| |||||||| ||  |||| ||||| || ||||| 
Sbjct: 526 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 585

                                                                       
Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621
           |||||||| ||||| |||||  | |||||  | || || ||||||||||| |||||||||
Sbjct: 586 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 645

                               
Query: 622 cttaaggacaatcttgttgc 641
           || ||||| |||||||||||
Sbjct: 646 ctcaaggataatcttgttgc 665



to top

>gb|AY136473.1| Arabidopsis thaliana putative protein (At5g36230) mRNA, complete
           cds
          Length = 1594

 Score =  168 bits (85), Expect = 1e-38
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           ||||||||||||||||||||| ||||| ||||| ||   |||| ||||||||||||| ||
Sbjct: 128 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 187

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| |||| ||| |  | || ||||||||| | ||||||||||| | 
Sbjct: 188 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 247

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
            ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 248 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 307

                                                  
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323
           | || | || ||||||| ||||||||||||| |||||||
Sbjct: 308 cacaagatatggtgacatcttctttgaggttattttcat 346



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501
           |||||||  ||||| |||| ||||||| | |||||||  |||||||||||||  || | |
Sbjct: 462 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 521

                                                                       
Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561
           || || |||||  ||||| | ||||| |||||||| ||  |||| ||||| || ||||| 
Sbjct: 522 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 581

                                                                       
Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621
           |||||||| ||||| |||||  | |||||  | || || ||||||||||| |||||||||
Sbjct: 582 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 641

                               
Query: 622 cttaaggacaatcttgttgc 641
           || ||||| |||||||||||
Sbjct: 642 ctcaaggataatcttgttgc 661



to top

>gb|AY057642.1| Arabidopsis thaliana AT5g36230/T30G6_9 mRNA, complete cds
          Length = 1611

 Score =  168 bits (85), Expect = 1e-38
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                       
Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164
           ||||||||||||||||||||| ||||| ||||| ||   |||| ||||||||||||| ||
Sbjct: 131 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 190

                                                                       
Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224
           |||||| || |||||| |||| ||| |  | || ||||||||| | ||||||||||| | 
Sbjct: 191 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 250

                                                                       
Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284
            ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 251 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 310

                                                  
Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323
           | || | || ||||||| ||||||||||||| |||||||
Sbjct: 311 cacaagatatggtgacatcttctttgaggttattttcat 349



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                       
Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501
           |||||||  ||||| |||| ||||||| | |||||||  |||||||||||||  || | |
Sbjct: 465 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 524

                                                                       
Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561
           || || |||||  ||||| | ||||| |||||||| ||  |||| ||||| || ||||| 
Sbjct: 525 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 584

                                                                       
Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621
           |||||||| ||||| |||||  | |||||  | || || ||||||||||| |||||||||
Sbjct: 585 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 644

                               
Query: 622 cttaaggacaatcttgttgc 641
           || ||||| |||||||||||
Sbjct: 645 ctcaaggataatcttgttgc 664



to top

>dbj|AB026661.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T30G6
          Length = 76994

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 161/200 (80%)
 Strand = Plus / Plus

                                                                         
Query: 442   cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501
             |||||||  ||||| |||| ||||||| | |||||||  |||||||||||||  || | |
Sbjct: 29662 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 29721

                                                                         
Query: 502   tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561
             || || |||||  ||||| | ||||| |||||||| ||  |||| ||||| || ||||| 
Sbjct: 29722 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 29781

                                                                         
Query: 562   gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621
             |||||||| ||||| |||||  | |||||  | || || ||||||||||| |||||||||
Sbjct: 29782 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 29841

                                 
Query: 622   cttaaggacaatcttgttgc 641
             || ||||| |||||||||||
Sbjct: 29842 ctcaaggataatcttgttgc 29861



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                         
Query: 144   gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203
             |||| ||||||||||||| |||||||| || |||||| |||| ||| |  | || |||||
Sbjct: 28730 gcggattaagacccgcaaacggaatattgctgctcctctggaccctgcagccttttctga 28789

                                                      
Query: 204   tgcaattgtccagatttatctggataatgctggagatctgg 244
             |||| | ||||||||||| |  ||||||||||| |||||||
Sbjct: 28790 tgcagtggtccagatttaccatgataatgctggtgatctgg 28830



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 243   ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
             ||||||||||||||||||||| ||||| ||||| || || ||| || | || ||||||| 
Sbjct: 28919 ggaacttgttgccaaaagtattgagtcatcagaccttaatttcacaagatatggtgacat 28978

                         
Query: 303   cttctttgaggt 314
             ||||||||||||
Sbjct: 28979 cttctttgaggt 28990



to top

>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence
          Length = 53090

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 144   gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203
             |||| |||||||||||||  ||||||| || |||||| | || ||| |  | || |||||
Sbjct: 45804 gcggattaagacccgcaaaaggaatattgctgctcctctcgaccctgctgctttttctga 45863

                                                           
Query: 204   tgcaattgtccagatttatctggataatgctggagatctggaactt 249
             |||| | || ||||||||||||||||||||||| ||||||| ||||
Sbjct: 45864 tgcactagttcagatttatctggataatgctggtgatctggtactt 45909



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                         
Query: 523   tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582
             ||||| || ||||||||  |||| ||||| || ||||| |||||||||||||| ||||| 
Sbjct: 46419 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 46478

                                                                        
Query: 583   ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641
              | |||||  | ||  | || |||||||| ||||||||||||||||| | |||||||||
Sbjct: 46479 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 46537



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 243   ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
             |||||||||||||| |||| ||||||| || ||||| || |||||| | |||||||| | 
Sbjct: 46004 ggaacttgttgccagaagtttagagtcatctgatcttaatttctcaagatacggtgatat 46063

                         
Query: 303   cttctttgaggt 314
              |||||||||||
Sbjct: 46064 tttctttgaggt 46075



to top

>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 104/128 (81%)
 Strand = Plus / Minus

                                                                         
Query: 481   cttgaaaatgttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagaga 540
             ||||||||||| ||||||| ||| ||||||||||||||| | || || ||||||||||| 
Sbjct: 57031 cttgaaaatgtcatgcgaagattcctccagtccttggagcttttcgaggaaaatgagagg 56972

                                                                         
Query: 541   cagaaacttgccattttcacggcacttgcattttctcagaaattatcaggtctgccacct 600
              ||||  | || || ||||| ||||| || || ||||||||  |||| ||||| ||||| 
Sbjct: 56971 aagaagttggcaatcttcacagcactcgctttctctcagaagctatctggtctcccacca 56912

                     
Query: 601   gaaactgt 608
             || |||||
Sbjct: 56911 gagactgt 56904



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 243   ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302
             ||||||| |||| ||||| || || || || || ||||| |||||| | |||||||||||
Sbjct: 57849 ggaacttattgcaaaaagcattgaatcttctgacctcaatttctcaagatacggtgacac 57790

                        
Query: 303   cttctttgagg 313
             ||| |||||||
Sbjct: 57789 cttttttgagg 57779



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                         
Query: 144   gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203
             |||| ||||||||||||| ||||| || || || ||| |||| ||| |  | ||  ||||
Sbjct: 58057 gcggattaagacccgcaaacggaacatcgcggcgcctctggaccctgcagcatttgctga 57998

                                              
Query: 204   tgcaattgtccagatttatctggataatgctgg 236
             |||| | |||||||||||  |||||||||||||
Sbjct: 57997 tgcagtggtccagatttacttggataatgctgg 57965



to top

>ref|XM_676701.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8524.2), mRNA
          Length = 2067

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 63  gccacgatctccttcacctctc 84
           ||||||||||||||||||||||
Sbjct: 918 gccacgatctccttcacctctc 897



to top

>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 149     ttaagacccgcaagcggaata 169
               |||||||||||||||||||||
Sbjct: 1871901 ttaagacccgcaagcggaata 1871921



to top

>gb|AY805220.1| Homo sapiens paraoxonase 3 (PON3) gene, complete cds
          Length = 76547

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 527   aagaaaatgagagacagaaac 547
             |||||||||||||||||||||
Sbjct: 48992 aagaaaatgagagacagaaac 49012



to top

>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence
          Length = 191742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     cttcacctctcctctccttgc 94
              |||||||||||||||||||||
Sbjct: 144997 cttcacctctcctctccttgc 144977



to top

>gb|AE006246.1| Lactococcus lactis subsp. lactis IL1403 section 8 of 218 of the
            complete genome
          Length = 11010

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 302  ccttctttgaggttgttttca 322
            |||||||||||||||||||||
Sbjct: 9564 ccttctttgaggttgttttca 9544



to top

>gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, complete sequence
          Length = 163342

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 527   aagaaaatgagagacagaaac 547
             |||||||||||||||||||||
Sbjct: 78644 aagaaaatgagagacagaaac 78664



to top

>gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complete sequence
          Length = 116552

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 527   aagaaaatgagagacagaaac 547
             |||||||||||||||||||||
Sbjct: 98609 aagaaaatgagagacagaaac 98589



to top

>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part
              of the gene for a novel protein (LOC221061) and a novel
              gene, complete sequence
          Length = 118158

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    ttcagaaaacactgcgcagga 460
              |||||||||||||||||||||
Sbjct: 114640 ttcagaaaacactgcgcagga 114660



to top

>emb|AL451125.7| Human DNA sequence from clone RP11-474P12 on chromosome 9 Contains the
             5' end of the GOLGA1 gene for golgi autoantigen (golgin
             subfamily a, 1), the 3' end of a novel gene, a Friedreich
             ataxia (FRDA) pseudogene, and one CpG island, complete
             sequence
          Length = 129272

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    atctccttcacctctcctctc 89
             |||||||||||||||||||||
Sbjct: 47382 atctccttcacctctcctctc 47362



to top

>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence
          Length = 212595

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 524   ttgaagaaaatgagagacaga 544
             |||||||||||||||||||||
Sbjct: 44102 ttgaagaaaatgagagacaga 44122



to top

>gb|DQ334278.1| Tupaia minor clone JS132 microsatellite sequence
          Length = 509

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 535 gagagacagaaacttgccatt 555
           |||||||||||||||||||||
Sbjct: 174 gagagacagaaacttgccatt 154



to top

>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete
             sequence
          Length = 179661

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ccttcacctctcctctccttgccag 97
             |||||||||||||| ||||||||||
Sbjct: 84336 ccttcacctctcctttccttgccag 84360



to top

>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence
          Length = 173315

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ctccttcacctctcctctcc 90
             ||||||||||||||||||||
Sbjct: 85229 ctccttcacctctcctctcc 85210



to top

>gb|AF168099.1| Tauraco persa cytochrome oxidase III gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 783

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ctcacgttacggtgacacct 304
           ||||||||||||||||||||
Sbjct: 439 ctcacgttacggtgacacct 420



to top

>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence
          Length = 195598

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    tccttcacctctcctctcct 91
             ||||||||||||||||||||
Sbjct: 14120 tccttcacctctcctctcct 14101



to top

>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15,
             complete sequence
          Length = 197506

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   aagagtcttgaaaatgttat 494
             ||||||||||||||||||||
Sbjct: 93658 aagagtcttgaaaatgttat 93677



to top

>gb|BC042536.1| Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone
           IMAGE:4941180), partial cds
          Length = 3712

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  acctctcctctccttgccag 97
           ||||||||||||||||||||
Sbjct: 174 acctctcctctccttgccag 155



to top

>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete
             sequence
          Length = 121958

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   ttgcattttctcagaaatta 585
             ||||||||||||||||||||
Sbjct: 96779 ttgcattttctcagaaatta 96760



to top

>emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 on chromosome 6q24-25.2 Contains
              a pseudogene similar to peripheral myelin protein 2
              (M-FABP) (PMP2)(P2, MP2, FABP8) and two novel genes,
              complete sequence
          Length = 128330

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    tgaagaaaatgagagacaga 544
              ||||||||||||||||||||
Sbjct: 100046 tgaagaaaatgagagacaga 100027



to top

>emb|AL954346.7| Mouse DNA sequence from clone RP23-298H6 on chromosome 11 Contains part
             of a novel gene, the Efemp1 gene for epidermal growth
             factor-containing fibulin-like extracellular matrix
             protein 1 and a laminin receptor 1 (ribosomal protein SA)
             (Lamr1) pseudogene, complete sequence
          Length = 178153

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 515   tggagttctttgaagaaaatgaga 538
             |||||| |||||||||||||||||
Sbjct: 35904 tggagtactttgaagaaaatgaga 35881



to top

>gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosome 10, complete
             sequence
          Length = 192726

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 427   tatgtcctctttattcagaaaaca 450
             |||||||||| |||||||||||||
Sbjct: 83924 tatgtcctctctattcagaaaaca 83947



to top

>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence
          Length = 198481

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     acctctcctctccttgccag 97
              ||||||||||||||||||||
Sbjct: 103674 acctctcctctccttgccag 103655



to top

>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 168652

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   atttctccagtccttggagt 520
             ||||||||||||||||||||
Sbjct: 79930 atttctccagtccttggagt 79949



to top

>ref|NM_140915.3| Drosophila melanogaster CG14183-RA (CG14183), mRNA
          Length = 2713

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  atttctccagtccttggagt 520
            ||||||||||||||||||||
Sbjct: 1472 atttctccagtccttggagt 1453



to top

>gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complete sequence
          Length = 176467

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   gaagaaaatgagagacagaa 545
             ||||||||||||||||||||
Sbjct: 48973 gaagaaaatgagagacagaa 48954



to top

>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence
          Length = 221936

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcacctctcctctccttgcc 95
             ||||||||||||||||||||
Sbjct: 68325 tcacctctcctctccttgcc 68344



to top

>gb|AY058318.1| Drosophila melanogaster GH08353 full length cDNA
          Length = 2731

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  atttctccagtccttggagt 520
            ||||||||||||||||||||
Sbjct: 1472 atttctccagtccttggagt 1453



to top

>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence
          Length = 196331

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ctccttcacctctcctctcc 90
             ||||||||||||||||||||
Sbjct: 26391 ctccttcacctctcctctcc 26372



to top

>dbj|AK047328.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930049N01
            product:unclassifiable, full insert sequence
          Length = 2756

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ctggagatctggaacttgtt 252
            ||||||||||||||||||||
Sbjct: 1142 ctggagatctggaacttgtt 1123



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      tcctctttattcagaaaaca 450
                ||||||||||||||||||||
Sbjct: 27346114 tcctctttattcagaaaaca 27346133



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 501     atttctccagtccttggagt 520
               ||||||||||||||||||||
Sbjct: 6921118 atttctccagtccttggagt 6921137



to top

>dbj|AP006741.1| Gallus sonneratii mitochondrial DNA, complete genome
          Length = 16841

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ctcacgttacggtgacacct 304
             ||||||||||||||||||||
Sbjct: 10425 ctcacgttacggtgacacct 10406



to top

>gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome 10, complete sequence
          Length = 170671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 427   tatgtcctctttattcagaaaaca 450
             |||||||||| |||||||||||||
Sbjct: 42708 tatgtcctctctattcagaaaaca 42685



to top

>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence
          Length = 96974

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tggagatctggaacttgttg 253
             ||||||||||||||||||||
Sbjct: 10920 tggagatctggaacttgttg 10939



to top

>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0668C05
          Length = 142081

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   atttctccagtccttggagt 520
             ||||||||||||||||||||
Sbjct: 44933 atttctccagtccttggagt 44952



to top

>emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chromosome 2, complete
             sequence
          Length = 96360

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tctttgaggttgttttcatt 324
             ||||||||||||||||||||
Sbjct: 61149 tctttgaggttgttttcatt 61168



to top

>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_B03
          Length = 108992

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   atttctccagtccttggagt 520
             ||||||||||||||||||||
Sbjct: 77373 atttctccagtccttggagt 77392



to top

>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete
              sequence
          Length = 234263

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    atttctccagtccttggagt 520
              ||||||||||||||||||||
Sbjct: 232519 atttctccagtccttggagt 232538



to top

>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete
             sequence
          Length = 141796

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   aagaaaatgagagacagaaa 546
             ||||||||||||||||||||
Sbjct: 69478 aagaaaatgagagacagaaa 69459



to top

>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete
              sequence
          Length = 211901

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    acaccttctttgaggttgtt 318
              ||||||||||||||||||||
Sbjct: 171019 acaccttctttgaggttgtt 171000



to top

>dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-278J24, complete
            sequences
          Length = 164778

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 527  aagaaaatgagagacagaaa 546
            ||||||||||||||||||||
Sbjct: 2843 aagaaaatgagagacagaaa 2824



to top

>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete
             sequence
          Length = 207223

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   acaccttctttgaggttgtt 318
             ||||||||||||||||||||
Sbjct: 36186 acaccttctttgaggttgtt 36167



to top

>gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 map 4q25, complete sequence
          Length = 134649

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    gaagaaaatgagagacagaa 545
              ||||||||||||||||||||
Sbjct: 127811 gaagaaaatgagagacagaa 127792



to top

>dbj|AK116020.1| Ciona intestinalis cDNA, clone:citb004k05, full insert sequence
          Length = 1918

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  tgaagcaatattaccttatg 430
            ||||||||||||||||||||
Sbjct: 1674 tgaagcaatattaccttatg 1693



to top

>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence
          Length = 171278

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     tccttcacctctcctctcct 91
              ||||||||||||||||||||
Sbjct: 125783 tccttcacctctcctctcct 125764



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 431      tcctctttattcagaaaaca 450
                ||||||||||||||||||||
Sbjct: 27271714 tcctctttattcagaaaaca 27271733



to top

>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124605

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   tcctctttattcagaaaaca 450
             ||||||||||||||||||||
Sbjct: 14434 tcctctttattcagaaaaca 14453



to top

>gb|U14911.1|HSRGR1 Human RPE-retinal G protein coupled receptor (rgr) gene, exon 1
          Length = 848

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 78  acctctcctctccttgccag 97
           ||||||||||||||||||||
Sbjct: 590 acctctcctctccttgccag 571



to top

>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete
             sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ctggagatctggaacttgtt 252
             ||||||||||||||||||||
Sbjct: 47869 ctggagatctggaacttgtt 47888


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,979,450
Number of Sequences: 3902068
Number of extensions: 5979450
Number of successful extensions: 123172
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122871
Number of HSP's gapped (non-prelim): 289
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top