Clone Name | baall02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full insert sequence Length = 1609 Score = 599 bits (302), Expect = e-168 Identities = 477/536 (88%) Strand = Plus / Plus Query: 104 tgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagc 163 |||||||||||||||||||||||||||| || || ||||||||| ||||||||||||| | Sbjct: 134 tgtttatgagctcgaaggagaagcccactcttggaggccagcggattaagacccgcaaac 193 Query: 164 ggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatc 223 ||||||| || ||||||||||| ||| | || |||||||||||||||||||||||||||| Sbjct: 194 ggaatattgctgctcctttggaccctgcatcattctctgatgcaattgtccagatttatc 253 Query: 224 tggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaact 283 |||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 254 tggataatgctggagacctggaacttgttgccaaaagtatcgagtcctcggatctcaact 313 Query: 284 tctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactcagcctg 343 |||||||||||||||||||||| ||||||||||| |||||||| | ||| |||||||||| Sbjct: 314 tctcacgttacggtgacaccttttttgaggttgtattcattggagggcgcactcagcctg 373 Query: 344 gtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactgttcag 403 | || || ||||| || ||||| |||||||| |||||||||||| | |||| ||| ||| Sbjct: 374 gcacaataaaacctgaggaagaaggagagcgtcacccctattctgtacttgattgtgcag 433 Query: 404 cacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcaggaggc 463 | || ||||||||||| || |||| ||| |||| |||||||||||| |||||||||||| Sbjct: 434 cgcagcgtgaagcaattttgccttctgttctctacattcagaaaacattgcgcaggaggc 493 Query: 464 ctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttggagttct 523 ||||||| ||||||| |||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 494 ctttcttgataaagaatcttgaaaatgttatgcgcaaattccttcagtcactggagttct 553 Query: 524 ttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaat 583 | |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| | Sbjct: 554 tcgaagaaaatgagaggaagaaacttgccattttcacagcacttgccttttctcagaagt 613 Query: 584 tatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 639 |||||||||| ||||||||||||||||| |||||| |||| ||||| ||||||||| Sbjct: 614 tatcaggtcttccacctgaaactgtcttccagccactgctcaaggataatcttgtt 669
>gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, complete sequence Length = 1627 Score = 482 bits (243), Expect = e-133 Identities = 468/543 (86%), Gaps = 3/543 (0%) Strand = Plus / Minus Query: 99 atcgttgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccg 158 ||||||||||||||||||||||||||||||||| || || ||| |||| |||||||||| Sbjct: 1565 atcgttgtttatgagctcgaaggagaagcccactcttggaggcacgcggattaagacccg 1506 Query: 159 caagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagat 218 ||||||||| || |||||||||||||| ||| | || ||||||||||||||||| ||||| Sbjct: 1505 caagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgttcagat 1446 Query: 219 ttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatct 278 |||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||| || Sbjct: 1445 ttatctggataatggtggagatctggaacttgtcgccaaaagtatcgagtcctcagacct 1386 Query: 279 caacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactca 338 |||||||||||||||||||||||| || || ||||| ||||| |||| | ||| ||||| Sbjct: 1385 caacttctcacgttacggtgacacttttttcgaggtggtttttgttggagggcgcactca 1326 Query: 339 gcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactg 398 |||||| || || ||||| |||||| ||||| || ||||| |||||| | | || || Sbjct: 1325 gcctggcactataaaacctgaagaa---ggagaccgccacccttattctgtgttagattg 1269 Query: 399 ttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcag 458 | ||||||| |||||| |||| || |||| || |||| ||| ||||||||| ||||||| Sbjct: 1268 tgcagcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgcag 1209 Query: 459 gaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttgga 518 |||||||||||||||||||| |||||||||||||||||| ||||| ||||| || ||||| Sbjct: 1208 gaggcctttcttaataaagaatcttgaaaatgttatgcgcaaattcctccaatctttgga 1149 Query: 519 gttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctca 578 |||||||||||||||||||||| ||||||| ||||| ||||| || |||||||||||||| Sbjct: 1148 gttctttgaagaaaatgagagaaagaaactcgccatattcactgcccttgcattttctca 1089 Query: 579 gaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgt 638 ||| ||||||| || || ||||| || || || |||||| |||| ||||| |||||||| Sbjct: 1088 gaagctatcagggcttcctcctgagacagtgttccagccactgctcaaggataatcttgt 1029 Query: 639 tgc 641 ||| Sbjct: 1028 tgc 1026
>gb|AY103565.1| Zea mays PCO067369 mRNA sequence Length = 1771 Score = 418 bits (211), Expect = e-114 Identities = 460/543 (84%), Gaps = 3/543 (0%) Strand = Plus / Plus Query: 99 atcgttgtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccg 158 ||||||||||||||||||||||||||||||||| || || ||| |||| |||||||||| Sbjct: 140 atcgttgtttatgagctcgaaggagaagcccactcttggaggcacgcggattaagacccg 199 Query: 159 caagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagat 218 ||||||||| || |||||||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 200 caagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgtccagat 259 Query: 219 ttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatct 278 |||||||||||||| ||||||||||||||| || ||||||||||| ||||| || || || Sbjct: 260 ttatctggataatggtggagatctggaactcgtcgccaaaagtattgagtcttccgacct 319 Query: 279 caacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactca 338 ||||||||||||||||||||||||||| |||||||| ||||| |||| | || ||||| Sbjct: 320 caacttctcacgttacggtgacaccttttttgaggtggtttttgttggaggacgcactca 379 Query: 339 gcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactg 398 |||||| || | ||||| |||||| ||||| || ||||| |||||| | | || || Sbjct: 380 gcctggcactgtaaaacctgaagaa---ggagaccgccacccttattctatgttagattg 436 Query: 399 ttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcag 458 | ||||| |||||| |||| || |||| || |||| ||| ||||||||| ||||||| Sbjct: 437 tgtggcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgcag 496 Query: 459 gaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttgga 518 |||||||||||||||||| | |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 497 gaggcctttcttaataaaaaatcttgaaaatgttatgcgcaaattcctccaatccttgga 556 Query: 519 gttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctca 578 ||||||||| ||||||||||| ||||||| ||||| ||||| || |||||||||||||| Sbjct: 557 gttctttgaggaaaatgagaggaagaaactcgccatattcacagcccttgcattttctca 616 Query: 579 gaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgt 638 || | ||||| || || || || || || || ||||||||||| ||||| ||||| || Sbjct: 617 aaagctgtcagggcttcctccggagacagtgttccagccattgctcaaggataatctggt 676 Query: 639 tgc 641 ||| Sbjct: 677 tgc 679
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Plus Query: 311 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 90027 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 90086 Query: 371 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 90087 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 90146 Query: 431 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 90147 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 90206 Query: 491 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 90207 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 90266 Query: 551 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 90267 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 90326 Query: 611 ttcagccattgcttaaggacaatcttgtt 639 | |||||| |||| ||||| ||||||||| Sbjct: 90327 tccagccactgctcaaggataatcttgtt 90355 Score = 141 bits (71), Expect = 3e-30 Identities = 97/106 (91%) Strand = Plus / Plus Query: 139 ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198 ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || ||| Sbjct: 88710 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 88769 Query: 199 tctgatgcaattgtccagatttatctggataatgctggagatctgg 244 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 88770 tctgatgcaattgtccagatttatctggataatgctggagacctgg 88815 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 89352 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 89411 Query: 303 cttctttgaggt 314 ||| |||||||| Sbjct: 89412 cttttttgaggt 89423 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 agctcgaaggagaagcccac 131 |||||||||||||||||||| Sbjct: 87775 agctcgaaggagaagcccac 87794
>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20 map near S6115, complete sequence Length = 139249 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 311 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 138671 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 138612 Query: 371 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 138611 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 138552 Query: 431 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 138551 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 138492 Query: 491 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 138491 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 138432 Query: 551 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 138431 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 138372 Query: 611 ttcagccattgcttaaggacaatcttgtt 639 | |||||| |||| ||||| ||||||||| Sbjct: 138371 tccagccactgctcaaggataatcttgtt 138343
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 311 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12078045 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12077986 Query: 371 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12077985 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12077926 Query: 431 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12077925 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12077866 Query: 491 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12077865 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12077806 Query: 551 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12077805 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12077746 Query: 611 ttcagccattgcttaaggacaatcttgtt 639 | |||||| |||| ||||| ||||||||| Sbjct: 12077745 tccagccactgctcaaggataatcttgtt 12077717 Score = 141 bits (71), Expect = 3e-30 Identities = 97/106 (91%) Strand = Plus / Minus Query: 139 ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198 ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || ||| Sbjct: 12079362 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 12079303 Query: 199 tctgatgcaattgtccagatttatctggataatgctggagatctgg 244 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12079302 tctgatgcaattgtccagatttatctggataatgctggagacctgg 12079257 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12078720 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12078661 Query: 303 cttctttgaggt 314 ||| |||||||| Sbjct: 12078660 cttttttgaggt 12078649 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 agctcgaaggagaagcccac 131 |||||||||||||||||||| Sbjct: 12080297 agctcgaaggagaagcccac 12080278
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 311 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 370 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12157352 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12157293 Query: 371 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 430 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12157292 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12157233 Query: 431 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 490 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12157232 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12157173 Query: 491 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 550 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12157172 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12157113 Query: 551 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 610 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12157112 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12157053 Query: 611 ttcagccattgcttaaggacaatcttgtt 639 | |||||| |||| ||||| ||||||||| Sbjct: 12157052 tccagccactgctcaaggataatcttgtt 12157024 Score = 141 bits (71), Expect = 3e-30 Identities = 97/106 (91%) Strand = Plus / Minus Query: 139 ggccagcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttc 198 ||||||||| ||||||||||||| |||||||| || ||||||||||| ||| | || ||| Sbjct: 12158669 ggccagcggattaagacccgcaaacggaatattgctgctcctttggaccctgcatcattc 12158610 Query: 199 tctgatgcaattgtccagatttatctggataatgctggagatctgg 244 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12158609 tctgatgcaattgtccagatttatctggataatgctggagacctgg 12158564 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12158027 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12157968 Query: 303 cttctttgaggt 314 ||| |||||||| Sbjct: 12157967 cttttttgaggt 12157956 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 agctcgaaggagaagcccac 131 |||||||||||||||||||| Sbjct: 12159604 agctcgaaggagaagcccac 12159585
>ref|NM_105195.2| Arabidopsis thaliana translation initiation factor AT1G65220 mRNA, complete cds Length = 1500 Score = 174 bits (88), Expect = 2e-40 Identities = 188/222 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 |||||||||||| |||||||||||||| ||||| || |||| ||||||||||||| | Sbjct: 90 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 149 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 150 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 209 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 210 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 269 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 270 ctcaagatacggtgatattttctttgaggttgttttcattgg 311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 505 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 564 Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 565 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 623
>gb|AY056181.1| Arabidopsis thaliana unknown protein (At1g65220) mRNA, complete cds Length = 1477 Score = 174 bits (88), Expect = 2e-40 Identities = 188/222 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 |||||||||||| |||||||||||||| ||||| || |||| ||||||||||||| | Sbjct: 67 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600
>gb|BT006174.1| Arabidopsis thaliana clone RAFL09-89-P13 (R20012) unknown protein (At1g65220) mRNA, complete cds Length = 1469 Score = 174 bits (88), Expect = 2e-40 Identities = 188/222 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 |||||||||||| |||||||||||||| ||||| || |||| ||||||||||||| | Sbjct: 67 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 126 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 127 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 186 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 187 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 246 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 247 ctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600
>emb|BX814895.1|CNS0AEMB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 174 bits (88), Expect = 2e-40 Identities = 188/222 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 |||||||||||| |||||||||||||| ||||| || |||| ||||||||||||| | Sbjct: 65 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286
>gb|AY086089.1| Arabidopsis thaliana clone 21223 mRNA, complete sequence Length = 1456 Score = 174 bits (88), Expect = 2e-40 Identities = 188/222 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 |||||||||||| |||||||||||||| ||||| || |||| ||||||||||||| | Sbjct: 65 gtttatgagctcaaaggagaagcccactctcggaggtacgcggattaagacccgcaaaag 124 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| | || ||| | | || ||||||||| | || ||||||||||| Sbjct: 125 gaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttatct 184 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 |||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || || Sbjct: 185 ggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaattt 244 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcattgg 326 |||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ctcaagatacggtgatattttctttgaggttgttttcattgg 286 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 480 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 539 Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 540 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 598
>ref|NM_123014.2| Arabidopsis thaliana translation initiation factor AT5G36230 mRNA, complete cds Length = 1600 Score = 168 bits (85), Expect = 1e-38 Identities = 185/219 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 ||||||||||||||||||||| ||||| ||||| || |||| ||||||||||||| || Sbjct: 132 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 191 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 192 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 251 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 252 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 311 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 312 cacaagatatggtgacatcttctttgaggttattttcat 350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 466 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 525 Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 526 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 585 Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 586 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 645 Query: 622 cttaaggacaatcttgttgc 641 || ||||| ||||||||||| Sbjct: 646 ctcaaggataatcttgttgc 665
>gb|AY136473.1| Arabidopsis thaliana putative protein (At5g36230) mRNA, complete cds Length = 1594 Score = 168 bits (85), Expect = 1e-38 Identities = 185/219 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 ||||||||||||||||||||| ||||| ||||| || |||| ||||||||||||| || Sbjct: 128 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 187 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 188 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 247 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 248 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 307 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 308 cacaagatatggtgacatcttctttgaggttattttcat 346 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 462 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 521 Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 522 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 581 Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 582 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 641 Query: 622 cttaaggacaatcttgttgc 641 || ||||| ||||||||||| Sbjct: 642 ctcaaggataatcttgttgc 661
>gb|AY057642.1| Arabidopsis thaliana AT5g36230/T30G6_9 mRNA, complete cds Length = 1611 Score = 168 bits (85), Expect = 1e-38 Identities = 185/219 (84%) Strand = Plus / Plus Query: 105 gtttatgagctcgaaggagaagcccaccctcggnggccagcggnttaagacccgcaagcg 164 ||||||||||||||||||||| ||||| ||||| || |||| ||||||||||||| || Sbjct: 131 gtttatgagctcgaaggagaaacccactctcggaggtacgcggattaagacccgcaaacg 190 Query: 165 gaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttatct 224 |||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| | Sbjct: 191 gaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttacca 250 Query: 225 ggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaactt 284 ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || || Sbjct: 251 tgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaattt 310 Query: 285 ctcacgttacggtgacaccttctttgaggttgttttcat 323 | || | || ||||||| ||||||||||||| ||||||| Sbjct: 311 cacaagatatggtgacatcttctttgaggttattttcat 349 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 465 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 524 Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 525 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 584 Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 585 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 644 Query: 622 cttaaggacaatcttgttgc 641 || ||||| ||||||||||| Sbjct: 645 ctcaaggataatcttgttgc 664
>dbj|AB026661.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T30G6 Length = 76994 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 442 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 501 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 29662 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 29721 Query: 502 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 561 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 29722 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 29781 Query: 562 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 621 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 29782 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 29841 Query: 622 cttaaggacaatcttgttgc 641 || ||||| ||||||||||| Sbjct: 29842 ctcaaggataatcttgttgc 29861 Score = 67.9 bits (34), Expect = 4e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 144 gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203 |||| ||||||||||||| |||||||| || |||||| |||| ||| | | || ||||| Sbjct: 28730 gcggattaagacccgcaaacggaatattgctgctcctctggaccctgcagccttttctga 28789 Query: 204 tgcaattgtccagatttatctggataatgctggagatctgg 244 |||| | ||||||||||| | ||||||||||| ||||||| Sbjct: 28790 tgcagtggtccagatttaccatgataatgctggtgatctgg 28830 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 ||||||||||||||||||||| ||||| ||||| || || ||| || | || ||||||| Sbjct: 28919 ggaacttgttgccaaaagtattgagtcatcagaccttaatttcacaagatatggtgacat 28978 Query: 303 cttctttgaggt 314 |||||||||||| Sbjct: 28979 cttctttgaggt 28990
>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence Length = 53090 Score = 69.9 bits (35), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 144 gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203 |||| ||||||||||||| ||||||| || |||||| | || ||| | | || ||||| Sbjct: 45804 gcggattaagacccgcaaaaggaatattgctgctcctctcgaccctgctgctttttctga 45863 Query: 204 tgcaattgtccagatttatctggataatgctggagatctggaactt 249 |||| | || ||||||||||||||||||||||| ||||||| |||| Sbjct: 45864 tgcactagttcagatttatctggataatgctggtgatctggtactt 45909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 523 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 582 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 46419 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 46478 Query: 583 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 641 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 46479 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 46537 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 |||||||||||||| |||| ||||||| || ||||| || |||||| | |||||||| | Sbjct: 46004 ggaacttgttgccagaagtttagagtcatctgatcttaatttctcaagatacggtgatat 46063 Query: 303 cttctttgaggt 314 ||||||||||| Sbjct: 46064 tttctttgaggt 46075
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 481 cttgaaaatgttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagaga 540 ||||||||||| ||||||| ||| ||||||||||||||| | || || ||||||||||| Sbjct: 57031 cttgaaaatgtcatgcgaagattcctccagtccttggagcttttcgaggaaaatgagagg 56972 Query: 541 cagaaacttgccattttcacggcacttgcattttctcagaaattatcaggtctgccacct 600 |||| | || || ||||| ||||| || || |||||||| |||| ||||| ||||| Sbjct: 56971 aagaagttggcaatcttcacagcactcgctttctctcagaagctatctggtctcccacca 56912 Query: 601 gaaactgt 608 || ||||| Sbjct: 56911 gagactgt 56904 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 243 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 302 ||||||| |||| ||||| || || || || || ||||| |||||| | ||||||||||| Sbjct: 57849 ggaacttattgcaaaaagcattgaatcttctgacctcaatttctcaagatacggtgacac 57790 Query: 303 cttctttgagg 313 ||| ||||||| Sbjct: 57789 cttttttgagg 57779 Score = 44.1 bits (22), Expect = 0.56 Identities = 75/93 (80%) Strand = Plus / Minus Query: 144 gcggnttaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctga 203 |||| ||||||||||||| ||||| || || || ||| |||| ||| | | || |||| Sbjct: 58057 gcggattaagacccgcaaacggaacatcgcggcgcctctggaccctgcagcatttgctga 57998 Query: 204 tgcaattgtccagatttatctggataatgctgg 236 |||| | ||||||||||| ||||||||||||| Sbjct: 57997 tgcagtggtccagatttacttggataatgctgg 57965
>ref|XM_676701.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8524.2), mRNA Length = 2067 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 gccacgatctccttcacctctc 84 |||||||||||||||||||||| Sbjct: 918 gccacgatctccttcacctctc 897
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 ttaagacccgcaagcggaata 169 ||||||||||||||||||||| Sbjct: 1871901 ttaagacccgcaagcggaata 1871921
>gb|AY805220.1| Homo sapiens paraoxonase 3 (PON3) gene, complete cds Length = 76547 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 aagaaaatgagagacagaaac 547 ||||||||||||||||||||| Sbjct: 48992 aagaaaatgagagacagaaac 49012
>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence Length = 191742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cttcacctctcctctccttgc 94 ||||||||||||||||||||| Sbjct: 144997 cttcacctctcctctccttgc 144977
>gb|AE006246.1| Lactococcus lactis subsp. lactis IL1403 section 8 of 218 of the complete genome Length = 11010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 ccttctttgaggttgttttca 322 ||||||||||||||||||||| Sbjct: 9564 ccttctttgaggttgttttca 9544
>gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, complete sequence Length = 163342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 aagaaaatgagagacagaaac 547 ||||||||||||||||||||| Sbjct: 78644 aagaaaatgagagacagaaac 78664
>gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complete sequence Length = 116552 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 aagaaaatgagagacagaaac 547 ||||||||||||||||||||| Sbjct: 98609 aagaaaatgagagacagaaac 98589
>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part of the gene for a novel protein (LOC221061) and a novel gene, complete sequence Length = 118158 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 ttcagaaaacactgcgcagga 460 ||||||||||||||||||||| Sbjct: 114640 ttcagaaaacactgcgcagga 114660
>emb|AL451125.7| Human DNA sequence from clone RP11-474P12 on chromosome 9 Contains the 5' end of the GOLGA1 gene for golgi autoantigen (golgin subfamily a, 1), the 3' end of a novel gene, a Friedreich ataxia (FRDA) pseudogene, and one CpG island, complete sequence Length = 129272 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 atctccttcacctctcctctc 89 ||||||||||||||||||||| Sbjct: 47382 atctccttcacctctcctctc 47362
>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence Length = 212595 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttgaagaaaatgagagacaga 544 ||||||||||||||||||||| Sbjct: 44102 ttgaagaaaatgagagacaga 44122
>gb|DQ334278.1| Tupaia minor clone JS132 microsatellite sequence Length = 509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 gagagacagaaacttgccatt 555 ||||||||||||||||||||| Sbjct: 174 gagagacagaaacttgccatt 154
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 ccttcacctctcctctccttgccag 97 |||||||||||||| |||||||||| Sbjct: 84336 ccttcacctctcctttccttgccag 84360
>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence Length = 173315 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctccttcacctctcctctcc 90 |||||||||||||||||||| Sbjct: 85229 ctccttcacctctcctctcc 85210
>gb|AF168099.1| Tauraco persa cytochrome oxidase III gene, partial cds; mitochondrial gene for mitochondrial product Length = 783 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ctcacgttacggtgacacct 304 |||||||||||||||||||| Sbjct: 439 ctcacgttacggtgacacct 420
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tccttcacctctcctctcct 91 |||||||||||||||||||| Sbjct: 14120 tccttcacctctcctctcct 14101
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 aagagtcttgaaaatgttat 494 |||||||||||||||||||| Sbjct: 93658 aagagtcttgaaaatgttat 93677
>gb|BC042536.1| Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone IMAGE:4941180), partial cds Length = 3712 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 acctctcctctccttgccag 97 |||||||||||||||||||| Sbjct: 174 acctctcctctccttgccag 155
>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete sequence Length = 121958 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 ttgcattttctcagaaatta 585 |||||||||||||||||||| Sbjct: 96779 ttgcattttctcagaaatta 96760
>emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 on chromosome 6q24-25.2 Contains a pseudogene similar to peripheral myelin protein 2 (M-FABP) (PMP2)(P2, MP2, FABP8) and two novel genes, complete sequence Length = 128330 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tgaagaaaatgagagacaga 544 |||||||||||||||||||| Sbjct: 100046 tgaagaaaatgagagacaga 100027
>emb|AL954346.7| Mouse DNA sequence from clone RP23-298H6 on chromosome 11 Contains part of a novel gene, the Efemp1 gene for epidermal growth factor-containing fibulin-like extracellular matrix protein 1 and a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene, complete sequence Length = 178153 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 515 tggagttctttgaagaaaatgaga 538 |||||| ||||||||||||||||| Sbjct: 35904 tggagtactttgaagaaaatgaga 35881
>gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosome 10, complete sequence Length = 192726 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 tatgtcctctttattcagaaaaca 450 |||||||||| ||||||||||||| Sbjct: 83924 tatgtcctctctattcagaaaaca 83947
>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 acctctcctctccttgccag 97 |||||||||||||||||||| Sbjct: 103674 acctctcctctccttgccag 103655
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168652 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 79930 atttctccagtccttggagt 79949
>ref|NM_140915.3| Drosophila melanogaster CG14183-RA (CG14183), mRNA Length = 2713 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complete sequence Length = 176467 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gaagaaaatgagagacagaa 545 |||||||||||||||||||| Sbjct: 48973 gaagaaaatgagagacagaa 48954
>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence Length = 221936 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tcacctctcctctccttgcc 95 |||||||||||||||||||| Sbjct: 68325 tcacctctcctctccttgcc 68344
>gb|AY058318.1| Drosophila melanogaster GH08353 full length cDNA Length = 2731 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence Length = 196331 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctccttcacctctcctctcc 90 |||||||||||||||||||| Sbjct: 26391 ctccttcacctctcctctcc 26372
>dbj|AK047328.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049N01 product:unclassifiable, full insert sequence Length = 2756 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctggagatctggaacttgtt 252 |||||||||||||||||||| Sbjct: 1142 ctggagatctggaacttgtt 1123
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tcctctttattcagaaaaca 450 |||||||||||||||||||| Sbjct: 27346114 tcctctttattcagaaaaca 27346133
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 6921118 atttctccagtccttggagt 6921137
>dbj|AP006741.1| Gallus sonneratii mitochondrial DNA, complete genome Length = 16841 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ctcacgttacggtgacacct 304 |||||||||||||||||||| Sbjct: 10425 ctcacgttacggtgacacct 10406
>gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome 10, complete sequence Length = 170671 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 tatgtcctctttattcagaaaaca 450 |||||||||| ||||||||||||| Sbjct: 42708 tatgtcctctctattcagaaaaca 42685
>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence Length = 96974 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tggagatctggaacttgttg 253 |||||||||||||||||||| Sbjct: 10920 tggagatctggaacttgttg 10939
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 44933 atttctccagtccttggagt 44952
>emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chromosome 2, complete sequence Length = 96360 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tctttgaggttgttttcatt 324 |||||||||||||||||||| Sbjct: 61149 tctttgaggttgttttcatt 61168
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 77373 atttctccagtccttggagt 77392
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 atttctccagtccttggagt 520 |||||||||||||||||||| Sbjct: 232519 atttctccagtccttggagt 232538
>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete sequence Length = 141796 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 aagaaaatgagagacagaaa 546 |||||||||||||||||||| Sbjct: 69478 aagaaaatgagagacagaaa 69459
>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete sequence Length = 211901 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 acaccttctttgaggttgtt 318 |||||||||||||||||||| Sbjct: 171019 acaccttctttgaggttgtt 171000
>dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-278J24, complete sequences Length = 164778 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 aagaaaatgagagacagaaa 546 |||||||||||||||||||| Sbjct: 2843 aagaaaatgagagacagaaa 2824
>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete sequence Length = 207223 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 acaccttctttgaggttgtt 318 |||||||||||||||||||| Sbjct: 36186 acaccttctttgaggttgtt 36167
>gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 map 4q25, complete sequence Length = 134649 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gaagaaaatgagagacagaa 545 |||||||||||||||||||| Sbjct: 127811 gaagaaaatgagagacagaa 127792
>dbj|AK116020.1| Ciona intestinalis cDNA, clone:citb004k05, full insert sequence Length = 1918 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tgaagcaatattaccttatg 430 |||||||||||||||||||| Sbjct: 1674 tgaagcaatattaccttatg 1693
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tccttcacctctcctctcct 91 |||||||||||||||||||| Sbjct: 125783 tccttcacctctcctctcct 125764
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tcctctttattcagaaaaca 450 |||||||||||||||||||| Sbjct: 27271714 tcctctttattcagaaaaca 27271733
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tcctctttattcagaaaaca 450 |||||||||||||||||||| Sbjct: 14434 tcctctttattcagaaaaca 14453
>gb|U14911.1|HSRGR1 Human RPE-retinal G protein coupled receptor (rgr) gene, exon 1 Length = 848 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 acctctcctctccttgccag 97 |||||||||||||||||||| Sbjct: 590 acctctcctctccttgccag 571
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctggagatctggaacttgtt 252 |||||||||||||||||||| Sbjct: 47869 ctggagatctggaacttgtt 47888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,979,450 Number of Sequences: 3902068 Number of extensions: 5979450 Number of successful extensions: 123172 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122871 Number of HSP's gapped (non-prelim): 289 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)