Clone Name | baall07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK071277.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082M08, full insert sequence Length = 1609 Score = 583 bits (294), Expect = e-163 Identities = 479/538 (89%), Gaps = 2/538 (0%) Strand = Plus / Plus Query: 105 tgtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaa 164 |||||||||||||||||||||||||||| || || |||||||||| |||||||||||||| Sbjct: 134 tgtttatgagctcgaaggagaagcccactcttgg-aggccagcgg-attaagacccgcaa 191 Query: 165 gcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagattta 224 |||||||| || ||||||||||| ||| | || |||||||||||||||||||||||||| Sbjct: 192 acggaatattgctgctcctttggaccctgcatcattctctgatgcaattgtccagattta 251 Query: 225 tctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaa 284 |||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||| Sbjct: 252 tctggataatgctggagacctggaacttgttgccaaaagtatcgagtcctcggatctcaa 311 Query: 285 cttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtactcagcc 344 |||||||||||||||||||||||| ||||||||||| |||||||| | ||| |||||||| Sbjct: 312 cttctcacgttacggtgacaccttttttgaggttgtattcattggagggcgcactcagcc 371 Query: 345 tggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgactgttc 404 ||| || || ||||| || ||||| |||||||| |||||||||||| | |||| ||| | Sbjct: 372 tggcacaataaaacctgaggaagaaggagagcgtcacccctattctgtacttgattgtgc 431 Query: 405 agcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgcaggag 464 ||| || ||||||||||| || |||| ||| |||| |||||||||||| |||||||||| Sbjct: 432 agcgcagcgtgaagcaattttgccttctgttctctacattcagaaaacattgcgcaggag 491 Query: 465 gcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttggagtt 524 ||||||||| ||||||| |||||||||||||||||| ||||| || ||||| ||||||| Sbjct: 492 gcctttcttgataaagaatcttgaaaatgttatgcgcaaattccttcagtcactggagtt 551 Query: 525 ctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaa 584 ||| |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 552 cttcgaagaaaatgagaggaagaaacttgccattttcacagcacttgccttttctcagaa 611 Query: 585 attatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgtt 642 ||||||||||| ||||||||||||||||| |||||| |||| ||||| ||||||||| Sbjct: 612 gttatcaggtcttccacctgaaactgtcttccagccactgctcaaggataatcttgtt 669
>gb|AY596583.1| Saccharum officinarum clone SCBGLR1003E06, complete sequence Length = 1627 Score = 466 bits (235), Expect = e-128 Identities = 470/545 (86%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 100 atcgttgtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacc 159 ||||||||||||||||||||||||||||||||| || || |||| |||| ||||||||| Sbjct: 1565 atcgttgtttatgagctcgaaggagaagcccactcttgg-aggcacgcgg-attaagacc 1508 Query: 160 cgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccag 219 ||||||||||| || |||||||||||||| ||| | || ||||||||||||||||| ||| Sbjct: 1507 cgcaagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgttcag 1448 Query: 220 atttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagat 279 |||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 1447 atttatctggataatggtggagatctggaacttgtcgccaaaagtatcgagtcctcagac 1388 Query: 280 ctcaacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtact 339 |||||||||||||||||||||||||| || || ||||| ||||| |||| | ||| ||| Sbjct: 1387 ctcaacttctcacgttacggtgacacttttttcgaggtggtttttgttggagggcgcact 1328 Query: 340 cagcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgac 399 |||||||| || || ||||| |||||| ||||| || ||||| |||||| | | || Sbjct: 1327 cagcctggcactataaaacctgaagaa---ggagaccgccacccttattctgtgttagat 1271 Query: 400 tgttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgc 459 ||| ||||||| |||||| |||| || |||| || |||| ||| ||||||||| ||||| Sbjct: 1270 tgtgcagcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgc 1211 Query: 460 aggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttg 519 |||||||||||||||||||||| |||||||||||||||||| ||||| ||||| || ||| Sbjct: 1210 aggaggcctttcttaataaagaatcttgaaaatgttatgcgcaaattcctccaatctttg 1151 Query: 520 gagttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttct 579 |||||||||||||||||||||||| ||||||| ||||| ||||| || |||||||||||| Sbjct: 1150 gagttctttgaagaaaatgagagaaagaaactcgccatattcactgcccttgcattttct 1091 Query: 580 cagaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatctt 639 ||||| ||||||| || || ||||| || || || |||||| |||| ||||| |||||| Sbjct: 1090 cagaagctatcagggcttcctcctgagacagtgttccagccactgctcaaggataatctt 1031 Query: 640 gttgc 644 ||||| Sbjct: 1030 gttgc 1026
>gb|AY103565.1| Zea mays PCO067369 mRNA sequence Length = 1771 Score = 402 bits (203), Expect = e-109 Identities = 462/545 (84%), Gaps = 5/545 (0%) Strand = Plus / Plus Query: 100 atcgttgtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacc 159 ||||||||||||||||||||||||||||||||| || || |||| |||| ||||||||| Sbjct: 140 atcgttgtttatgagctcgaaggagaagcccactcttgg-aggcacgcgg-attaagacc 197 Query: 160 cgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccag 219 ||||||||||| || |||||||||||||| ||| | || ||||||||||||||||||||| Sbjct: 198 cgcaagcggaacattgcagctcctttggaccctgcatcattctctgatgcaattgtccag 257 Query: 220 atttatctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagat 279 |||||||||||||||| ||||||||||||||| || ||||||||||| ||||| || || Sbjct: 258 atttatctggataatggtggagatctggaactcgtcgccaaaagtattgagtcttccgac 317 Query: 280 ctcaacttctcacgttacggtgacaccttctttgaggttgttttcattggtgtgcgtact 339 ||||||||||||||||||||||||||||| |||||||| ||||| |||| | || ||| Sbjct: 318 ctcaacttctcacgttacggtgacaccttttttgaggtggtttttgttggaggacgcact 377 Query: 340 cagcctggtacgattaaacccgaagaagagggagagcggcacccctattctctcattgac 399 |||||||| || | ||||| |||||| ||||| || ||||| |||||| | | || Sbjct: 378 cagcctggcactgtaaaacctgaagaa---ggagaccgccacccttattctatgttagat 434 Query: 400 tgttcagcacaacgtgaagcaatattaccttatgtcctctttattcagaaaacactgcgc 459 ||| ||||| |||||| |||| || |||| || |||| ||| ||||||||| ||||| Sbjct: 435 tgtgtggcacagcgtgaaacaattttgcctttcgtactctatatccagaaaacattgcgc 494 Query: 460 aggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaatttctccagtccttg 519 |||||||||||||||||||| | |||||||||||||||||| ||||| ||||| |||||| Sbjct: 495 aggaggcctttcttaataaaaaatcttgaaaatgttatgcgcaaattcctccaatccttg 554 Query: 520 gagttctttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttct 579 ||||||||||| ||||||||||| ||||||| ||||| ||||| || |||||||||||| Sbjct: 555 gagttctttgaggaaaatgagaggaagaaactcgccatattcacagcccttgcattttct 614 Query: 580 cagaaattatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatctt 639 || || | ||||| || || || || || || || ||||||||||| ||||| ||||| Sbjct: 615 caaaagctgtcagggcttcctccggagacagtgttccagccattgctcaaggataatctg 674 Query: 640 gttgc 644 ||||| Sbjct: 675 gttgc 679
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Plus Query: 314 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 373 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 90027 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 90086 Query: 374 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 433 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 90087 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 90146 Query: 434 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 493 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 90147 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 90206 Query: 494 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 553 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 90207 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 90266 Query: 554 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 613 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 90267 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 90326 Query: 614 ttcagccattgcttaaggacaatcttgtt 642 | |||||| |||| ||||| ||||||||| Sbjct: 90327 tccagccactgctcaaggataatcttgtt 90355 Score = 135 bits (68), Expect = 2e-28 Identities = 99/108 (91%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 140 aggccagcggnattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 199 |||||||||| |||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 88709 aggccagcgg-attaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 88767 Query: 200 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 247 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 88768 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 88815 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 89352 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 89411 Query: 306 cttctttgaggt 317 ||| |||||||| Sbjct: 89412 cttttttgaggt 89423 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agctcgaaggagaagcccac 132 |||||||||||||||||||| Sbjct: 87775 agctcgaaggagaagcccac 87794
>gb|AC148658.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018P20 map near S6115, complete sequence Length = 139249 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 314 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 373 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 138671 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 138612 Query: 374 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 433 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 138611 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 138552 Query: 434 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 493 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 138551 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 138492 Query: 494 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 553 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 138491 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 138432 Query: 554 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 613 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 138431 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 138372 Query: 614 ttcagccattgcttaaggacaatcttgtt 642 | |||||| |||| ||||| ||||||||| Sbjct: 138371 tccagccactgctcaaggataatcttgtt 138343
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 314 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 373 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12078045 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12077986 Query: 374 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 433 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12077985 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12077926 Query: 434 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 493 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12077925 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12077866 Query: 494 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 553 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12077865 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12077806 Query: 554 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 613 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12077805 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12077746 Query: 614 ttcagccattgcttaaggacaatcttgtt 642 | |||||| |||| ||||| ||||||||| Sbjct: 12077745 tccagccactgctcaaggataatcttgtt 12077717 Score = 135 bits (68), Expect = 2e-28 Identities = 99/108 (91%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 140 aggccagcggnattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 199 |||||||||| |||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 12079363 aggccagcgg-attaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 12079305 Query: 200 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 247 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12079304 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 12079257 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12078720 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12078661 Query: 306 cttctttgaggt 317 ||| |||||||| Sbjct: 12078660 cttttttgaggt 12078649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 agctcgaaggagaagcccac 132 |||||||||||||||||||| Sbjct: 12080297 agctcgaaggagaagcccac 12080278
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 311 bits (157), Expect = 2e-81 Identities = 286/329 (86%) Strand = Plus / Minus Query: 314 aggttgttttcattggtgtgcgtactcagcctggtacgattaaacccgaagaagagggag 373 ||||||| |||||||| | ||| ||||||||||| || || ||||| || ||||| |||| Sbjct: 12157352 aggttgtattcattggagggcgcactcagcctggcacaataaaacctgaggaagaaggag 12157293 Query: 374 agcggcacccctattctctcattgactgttcagcacaacgtgaagcaatattaccttatg 433 |||| |||||||||||| | |||| ||| |||| || ||||||||||| || |||| || Sbjct: 12157292 agcgtcacccctattctgtacttgattgtgcagcgcagcgtgaagcaattttgccttctg 12157233 Query: 434 tcctctttattcagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatg 493 | |||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 12157232 ttctctacattcagaaaacattgcgcaggaggcctttcttgataaagaatcttgaaaatg 12157173 Query: 494 ttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagagacagaaacttg 553 ||||||| ||||| || ||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 12157172 ttatgcgcaaattccttcagtcactggagttcttcgaagaaaatgagaggaagaaacttg 12157113 Query: 554 ccattttcacggcacttgcattttctcagaaattatcaggtctgccacctgaaactgtct 613 |||||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 12157112 ccattttcacagcacttgccttttctcagaagttatcaggtcttccacctgaaactgtct 12157053 Query: 614 ttcagccattgcttaaggacaatcttgtt 642 | |||||| |||| ||||| ||||||||| Sbjct: 12157052 tccagccactgctcaaggataatcttgtt 12157024 Score = 135 bits (68), Expect = 2e-28 Identities = 99/108 (91%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 140 aggccagcggnattaagacccgcaagcggaatatagcagctcctttggatccttcgtcgt 199 |||||||||| |||||||||||||| |||||||| || ||||||||||| ||| | || | Sbjct: 12158670 aggccagcgg-attaagacccgcaaacggaatattgctgctcctttggaccctgcatcat 12158612 Query: 200 tctctgatgcaattgtccagatttatctggataatgctggagatctgg 247 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 12158611 tctctgatgcaattgtccagatttatctggataatgctggagacctgg 12158564 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 12158027 ggaacttgttgccaaaagtatcgagtcctcggatctcaacttctcacgttacggtgacac 12157968 Query: 306 cttctttgaggt 317 ||| |||||||| Sbjct: 12157967 cttttttgaggt 12157956 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 agctcgaaggagaagcccac 132 |||||||||||||||||||| Sbjct: 12159604 agctcgaaggagaagcccac 12159585
>ref|NM_105195.2| Arabidopsis thaliana translation initiation factor AT1G65220 mRNA, complete cds Length = 1500 Score = 159 bits (80), Expect = 1e-35 Identities = 190/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 |||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 90 gtttatgagctcaaaggagaagcccactctcgg-aggtacgcgg-attaagacccgcaaa 147 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 ||||||| || |||||| | || ||| | | || ||||||||| | || ||||||||| Sbjct: 148 aggaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttat 207 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 |||||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || Sbjct: 208 ctggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaat 267 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcattgg 329 |||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 268 ttctcaagatacggtgatattttctttgaggttgttttcattgg 311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 526 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 585 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 505 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 564 Query: 586 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 644 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 565 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 623
>gb|AY056181.1| Arabidopsis thaliana unknown protein (At1g65220) mRNA, complete cds Length = 1477 Score = 159 bits (80), Expect = 1e-35 Identities = 190/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 |||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 67 gtttatgagctcaaaggagaagcccactctcgg-aggtacgcgg-attaagacccgcaaa 124 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 ||||||| || |||||| | || ||| | | || ||||||||| | || ||||||||| Sbjct: 125 aggaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttat 184 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 |||||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || Sbjct: 185 ctggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaat 244 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcattgg 329 |||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ttctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 526 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 585 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 586 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 644 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600
>gb|BT006174.1| Arabidopsis thaliana clone RAFL09-89-P13 (R20012) unknown protein (At1g65220) mRNA, complete cds Length = 1469 Score = 159 bits (80), Expect = 1e-35 Identities = 190/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 |||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 67 gtttatgagctcaaaggagaagcccactctcgg-aggtacgcgg-attaagacccgcaaa 124 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 ||||||| || |||||| | || ||| | | || ||||||||| | || ||||||||| Sbjct: 125 aggaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttat 184 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 |||||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || Sbjct: 185 ctggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaat 244 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcattgg 329 |||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 245 ttctcaagatacggtgatattttctttgaggttgttttcattgg 288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 526 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 585 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 482 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 541 Query: 586 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 644 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 542 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 600
>emb|BX814895.1|CNS0AEMB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1437 Score = 159 bits (80), Expect = 1e-35 Identities = 190/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 |||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 65 gtttatgagctcaaaggagaagcccactctcgg-aggtacgcgg-attaagacccgcaaa 122 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 ||||||| || |||||| | || ||| | | || ||||||||| | || ||||||||| Sbjct: 123 aggaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttat 182 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 |||||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || Sbjct: 183 ctggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaat 242 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcattgg 329 |||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 243 ttctcaagatacggtgatattttctttgaggttgttttcattgg 286
>gb|AY086089.1| Arabidopsis thaliana clone 21223 mRNA, complete sequence Length = 1456 Score = 159 bits (80), Expect = 1e-35 Identities = 190/224 (84%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 |||||||||||| |||||||||||||| ||||| ||| |||| |||||||||||||| Sbjct: 65 gtttatgagctcaaaggagaagcccactctcgg-aggtacgcgg-attaagacccgcaaa 122 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 ||||||| || |||||| | || ||| | | || ||||||||| | || ||||||||| Sbjct: 123 aggaatattgctgctcctctcgaccctgctgctttttctgatgcactagttcagatttat 182 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 |||||||||||||| ||||||||||||||||||| |||| ||||||| || ||||| || Sbjct: 183 ctggataatgctggtgatctggaacttgttgccagaagtttagagtcatctgatcttaat 242 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcattgg 329 |||||| | |||||||| | ||||||||||||||||||||||| Sbjct: 243 ttctcaagatacggtgatattttctttgaggttgttttcattgg 286 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 526 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 585 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 480 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 539 Query: 586 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 644 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 540 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 598
>ref|NM_123014.2| Arabidopsis thaliana translation initiation factor AT5G36230 mRNA, complete cds Length = 1600 Score = 153 bits (77), Expect = 8e-34 Identities = 187/221 (84%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 ||||||||||||||||||||| ||||| ||||| ||| |||| |||||||||||||| Sbjct: 132 gtttatgagctcgaaggagaaacccactctcgg-aggtacgcgg-attaagacccgcaaa 189 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 |||||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| Sbjct: 190 cggaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttac 249 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 250 catgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaat 309 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcat 326 ||| || | || ||||||| ||||||||||||| ||||||| Sbjct: 310 ttcacaagatatggtgacatcttctttgaggttattttcat 350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 445 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 504 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 466 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 525 Query: 505 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 564 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 526 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 585 Query: 565 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 624 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 586 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 645 Query: 625 cttaaggacaatcttgttgc 644 || ||||| ||||||||||| Sbjct: 646 ctcaaggataatcttgttgc 665
>gb|AY136473.1| Arabidopsis thaliana putative protein (At5g36230) mRNA, complete cds Length = 1594 Score = 153 bits (77), Expect = 8e-34 Identities = 187/221 (84%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 ||||||||||||||||||||| ||||| ||||| ||| |||| |||||||||||||| Sbjct: 128 gtttatgagctcgaaggagaaacccactctcgg-aggtacgcgg-attaagacccgcaaa 185 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 |||||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| Sbjct: 186 cggaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttac 245 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 246 catgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaat 305 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcat 326 ||| || | || ||||||| ||||||||||||| ||||||| Sbjct: 306 ttcacaagatatggtgacatcttctttgaggttattttcat 346 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 445 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 504 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 462 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 521 Query: 505 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 564 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 522 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 581 Query: 565 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 624 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 582 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 641 Query: 625 cttaaggacaatcttgttgc 644 || ||||| ||||||||||| Sbjct: 642 ctcaaggataatcttgttgc 661
>gb|AY057642.1| Arabidopsis thaliana AT5g36230/T30G6_9 mRNA, complete cds Length = 1611 Score = 153 bits (77), Expect = 8e-34 Identities = 187/221 (84%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 106 gtttatgagctcgaaggagaagcccaccctcggnaggccagcggnattaagacccgcaag 165 ||||||||||||||||||||| ||||| ||||| ||| |||| |||||||||||||| Sbjct: 131 gtttatgagctcgaaggagaaacccactctcgg-aggtacgcgg-attaagacccgcaaa 188 Query: 166 cggaatatagcagctcctttggatccttcgtcgttctctgatgcaattgtccagatttat 225 |||||||| || |||||| |||| ||| | | || ||||||||| | ||||||||||| Sbjct: 189 cggaatattgctgctcctctggaccctgcagccttttctgatgcagtggtccagatttac 248 Query: 226 ctggataatgctggagatctggaacttgttgccaaaagtatagagtcgtcagatctcaac 285 | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| || || Sbjct: 249 catgataatgctggtgatctggaacttgttgccaaaagtattgagtcatcagaccttaat 308 Query: 286 ttctcacgttacggtgacaccttctttgaggttgttttcat 326 ||| || | || ||||||| ||||||||||||| ||||||| Sbjct: 309 ttcacaagatatggtgacatcttctttgaggttattttcat 349 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 445 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 504 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 465 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 524 Query: 505 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 564 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 525 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 584 Query: 565 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 624 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 585 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 644 Query: 625 cttaaggacaatcttgttgc 644 || ||||| ||||||||||| Sbjct: 645 ctcaaggataatcttgttgc 664
>dbj|AB026661.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T30G6 Length = 76994 Score = 87.7 bits (44), Expect = 4e-14 Identities = 161/200 (80%) Strand = Plus / Plus Query: 445 cagaaaacactgcgcaggaggcctttcttaataaagagtcttgaaaatgttatgcgaaaa 504 ||||||| ||||| |||| ||||||| | ||||||| ||||||||||||| || | | Sbjct: 29662 cagaaaattctgcgtaggaagcctttcctcataaagaaccttgaaaatgttactcggaga 29721 Query: 505 tttctccagtccttggagttctttgaagaaaatgagagacagaaacttgccattttcacg 564 || || ||||| ||||| | ||||| |||||||| || |||| ||||| || ||||| Sbjct: 29722 ttcctgcagtcactggagctttttgaggaaaatgaaaggaagaagcttgctatcttcaca 29781 Query: 565 gcacttgcattttctcagaaattatcaggtctgccacctgaaactgtctttcagccattg 624 |||||||| ||||| ||||| | ||||| | || || ||||||||||| ||||||||| Sbjct: 29782 gcacttgccttttcccagaagctctcaggattacctccggaaactgtcttccagccattg 29841 Query: 625 cttaaggacaatcttgttgc 644 || ||||| ||||||||||| Sbjct: 29842 ctcaaggataatcttgttgc 29861 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 151 attaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgca 210 |||||||||||||| |||||||| || |||||| |||| ||| | | || ||||||||| Sbjct: 28734 attaagacccgcaaacggaatattgctgctcctctggaccctgcagccttttctgatgca 28793 Query: 211 attgtccagatttatctggataatgctggagatctgg 247 | ||||||||||| | ||||||||||| ||||||| Sbjct: 28794 gtggtccagatttaccatgataatgctggtgatctgg 28830 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 ||||||||||||||||||||| ||||| ||||| || || ||| || | || ||||||| Sbjct: 28919 ggaacttgttgccaaaagtattgagtcatcagaccttaatttcacaagatatggtgacat 28978 Query: 306 cttctttgaggt 317 |||||||||||| Sbjct: 28979 cttctttgaggt 28990
>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence Length = 53090 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 151 attaagacccgcaagcggaatatagcagctcctttggatccttcgtcgttctctgatgca 210 |||||||||||||| ||||||| || |||||| | || ||| | | || ||||||||| Sbjct: 45808 attaagacccgcaaaaggaatattgctgctcctctcgaccctgctgctttttctgatgca 45867 Query: 211 attgtccagatttatctggataatgctggagatctggaactt 252 | || ||||||||||||||||||||||| ||||||| |||| Sbjct: 45868 ctagttcagatttatctggataatgctggtgatctggtactt 45909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 526 tttgaagaaaatgagagacagaaacttgccattttcacggcacttgcattttctcagaaa 585 ||||| || |||||||| |||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 46419 tttgaggagaatgagaggaagaagcttgcaatattcacagcacttgcattttcacagaag 46478 Query: 586 ttatcaggtctgccacctgaaactgtctttcagccattgcttaaggacaatcttgttgc 644 | ||||| | || | || |||||||| ||||||||||||||||| | ||||||||| Sbjct: 46479 ctctcaggattacctgcagagactgtcttccagccattgcttaaggatactcttgttgc 46537 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 |||||||||||||| |||| ||||||| || ||||| || |||||| | |||||||| | Sbjct: 46004 ggaacttgttgccagaagtttagagtcatctgatcttaatttctcaagatacggtgatat 46063 Query: 306 cttctttgaggt 317 ||||||||||| Sbjct: 46064 tttctttgaggt 46075
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Minus Query: 484 cttgaaaatgttatgcgaaaatttctccagtccttggagttctttgaagaaaatgagaga 543 ||||||||||| ||||||| ||| ||||||||||||||| | || || ||||||||||| Sbjct: 57031 cttgaaaatgtcatgcgaagattcctccagtccttggagcttttcgaggaaaatgagagg 56972 Query: 544 cagaaacttgccattttcacggcacttgcattttctcagaaattatcaggtctgccacct 603 |||| | || || ||||| ||||| || || |||||||| |||| ||||| ||||| Sbjct: 56971 aagaagttggcaatcttcacagcactcgctttctctcagaagctatctggtctcccacca 56912 Query: 604 gaaactgt 611 || ||||| Sbjct: 56911 gagactgt 56904 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 246 ggaacttgttgccaaaagtatagagtcgtcagatctcaacttctcacgttacggtgacac 305 ||||||| |||| ||||| || || || || || ||||| |||||| | ||||||||||| Sbjct: 57849 ggaacttattgcaaaaagcattgaatcttctgacctcaatttctcaagatacggtgacac 57790 Query: 306 cttctttgagg 316 ||| ||||||| Sbjct: 57789 cttttttgagg 57779 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 203 ctgatgcaattgtccagatttatctggataatgctgg 239 |||||||| | ||||||||||| ||||||||||||| Sbjct: 58001 ctgatgcagtggtccagatttacttggataatgctgg 57965
>ref|XM_676701.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8524.2), mRNA Length = 2067 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 gccacgatctccttcacctctc 85 |||||||||||||||||||||| Sbjct: 918 gccacgatctccttcacctctc 897
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 ttaagacccgcaagcggaata 172 ||||||||||||||||||||| Sbjct: 1871901 ttaagacccgcaagcggaata 1871921
>gb|AY805220.1| Homo sapiens paraoxonase 3 (PON3) gene, complete cds Length = 76547 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 aagaaaatgagagacagaaac 550 ||||||||||||||||||||| Sbjct: 48992 aagaaaatgagagacagaaac 49012
>gb|AC146485.2| Xenopus tropicalis clone CH216-8M11, complete sequence Length = 191742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cttcacctctcctctccttgc 95 ||||||||||||||||||||| Sbjct: 144997 cttcacctctcctctccttgc 144977
>gb|AE006246.1| Lactococcus lactis subsp. lactis IL1403 section 8 of 218 of the complete genome Length = 11010 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ccttctttgaggttgttttca 325 ||||||||||||||||||||| Sbjct: 9564 ccttctttgaggttgttttca 9544
>gb|AC145888.3| Pan troglodytes BAC clone RP43-40H8 from 7, complete sequence Length = 163342 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 aagaaaatgagagacagaaac 550 ||||||||||||||||||||| Sbjct: 78644 aagaaaatgagagacagaaac 78664
>gb|AC004022.1| Homo sapiens BAC clone GS1-155M11 from 7, complete sequence Length = 116552 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 aagaaaatgagagacagaaac 550 ||||||||||||||||||||| Sbjct: 98609 aagaaaatgagagacagaaac 98589
>emb|AL607028.14| Human DNA sequence from clone RP11-25G10 on chromosome 10 Contains part of the gene for a novel protein (LOC221061) and a novel gene, complete sequence Length = 118158 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 ttcagaaaacactgcgcagga 463 ||||||||||||||||||||| Sbjct: 114640 ttcagaaaacactgcgcagga 114660
>emb|AL451125.7| Human DNA sequence from clone RP11-474P12 on chromosome 9 Contains the 5' end of the GOLGA1 gene for golgi autoantigen (golgin subfamily a, 1), the 3' end of a novel gene, a Friedreich ataxia (FRDA) pseudogene, and one CpG island, complete sequence Length = 129272 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 atctccttcacctctcctctc 90 ||||||||||||||||||||| Sbjct: 47382 atctccttcacctctcctctc 47362
>gb|AC121799.5| Mus musculus BAC clone RP23-429M22 from chromosome 1, complete sequence Length = 212595 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 ttgaagaaaatgagagacaga 547 ||||||||||||||||||||| Sbjct: 44102 ttgaagaaaatgagagacaga 44122
>gb|DQ334278.1| Tupaia minor clone JS132 microsatellite sequence Length = 509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 gagagacagaaacttgccatt 558 ||||||||||||||||||||| Sbjct: 174 gagagacagaaacttgccatt 154
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ccttcacctctcctctccttgccag 98 |||||||||||||| |||||||||| Sbjct: 84336 ccttcacctctcctttccttgccag 84360
>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence Length = 173315 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctccttcacctctcctctcc 91 |||||||||||||||||||| Sbjct: 85229 ctccttcacctctcctctcc 85210
>gb|AF168099.1| Tauraco persa cytochrome oxidase III gene, partial cds; mitochondrial gene for mitochondrial product Length = 783 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ctcacgttacggtgacacct 307 |||||||||||||||||||| Sbjct: 439 ctcacgttacggtgacacct 420
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tccttcacctctcctctcct 92 |||||||||||||||||||| Sbjct: 14120 tccttcacctctcctctcct 14101
>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15, complete sequence Length = 197506 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 aagagtcttgaaaatgttat 497 |||||||||||||||||||| Sbjct: 93658 aagagtcttgaaaatgttat 93677
>gb|BC042536.1| Homo sapiens retinal G protein coupled receptor, mRNA (cDNA clone IMAGE:4941180), partial cds Length = 3712 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acctctcctctccttgccag 98 |||||||||||||||||||| Sbjct: 174 acctctcctctccttgccag 155
>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete sequence Length = 121958 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 ttgcattttctcagaaatta 588 |||||||||||||||||||| Sbjct: 96779 ttgcattttctcagaaatta 96760
>emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 on chromosome 6q24-25.2 Contains a pseudogene similar to peripheral myelin protein 2 (M-FABP) (PMP2)(P2, MP2, FABP8) and two novel genes, complete sequence Length = 128330 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tgaagaaaatgagagacaga 547 |||||||||||||||||||| Sbjct: 100046 tgaagaaaatgagagacaga 100027
>emb|AL954346.7| Mouse DNA sequence from clone RP23-298H6 on chromosome 11 Contains part of a novel gene, the Efemp1 gene for epidermal growth factor-containing fibulin-like extracellular matrix protein 1 and a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene, complete sequence Length = 178153 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 tggagttctttgaagaaaatgaga 541 |||||| ||||||||||||||||| Sbjct: 35904 tggagtactttgaagaaaatgaga 35881
>gb|AC165292.2| Mus musculus BAC clone RP23-319D22 from chromosome 10, complete sequence Length = 192726 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 430 tatgtcctctttattcagaaaaca 453 |||||||||| ||||||||||||| Sbjct: 83924 tatgtcctctctattcagaaaaca 83947
>gb|AC022389.9| Homo sapiens chromosome 10 clone RP11-124L5, complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acctctcctctccttgccag 98 |||||||||||||||||||| Sbjct: 103674 acctctcctctccttgccag 103655
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168652 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 79930 atttctccagtccttggagt 79949
>ref|NM_140915.3| Drosophila melanogaster CG14183-RA (CG14183), mRNA Length = 2713 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC074349.6| Homo sapiens BAC clone RP11-703G6 from 4, complete sequence Length = 176467 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gaagaaaatgagagacagaa 548 |||||||||||||||||||| Sbjct: 48973 gaagaaaatgagagacagaa 48954
>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence Length = 221936 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 tcacctctcctctccttgcc 96 |||||||||||||||||||| Sbjct: 68325 tcacctctcctctccttgcc 68344
>gb|AY058318.1| Drosophila melanogaster GH08353 full length cDNA Length = 2731 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 1472 atttctccagtccttggagt 1453
>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence Length = 196331 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctccttcacctctcctctcc 91 |||||||||||||||||||| Sbjct: 26391 ctccttcacctctcctctcc 26372
>dbj|AK047328.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049N01 product:unclassifiable, full insert sequence Length = 2756 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctggagatctggaacttgtt 255 |||||||||||||||||||| Sbjct: 1142 ctggagatctggaacttgtt 1123
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 tcctctttattcagaaaaca 453 |||||||||||||||||||| Sbjct: 27346114 tcctctttattcagaaaaca 27346133
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 6921118 atttctccagtccttggagt 6921137
>dbj|AP006741.1| Gallus sonneratii mitochondrial DNA, complete genome Length = 16841 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ctcacgttacggtgacacct 307 |||||||||||||||||||| Sbjct: 10425 ctcacgttacggtgacacct 10406
>gb|AC144800.3| Mus musculus BAC clone RP24-257N2 from chromosome 10, complete sequence Length = 170671 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 430 tatgtcctctttattcagaaaaca 453 |||||||||| ||||||||||||| Sbjct: 42708 tatgtcctctctattcagaaaaca 42685
>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence Length = 96974 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 tggagatctggaacttgttg 256 |||||||||||||||||||| Sbjct: 10920 tggagatctggaacttgttg 10939
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 44933 atttctccagtccttggagt 44952
>emb|BX294441.9| Mouse DNA sequence from clone RP23-421H1 on chromosome 2, complete sequence Length = 96360 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tctttgaggttgttttcatt 327 |||||||||||||||||||| Sbjct: 61149 tctttgaggttgttttcatt 61168
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 77373 atttctccagtccttggagt 77392
>gb|AE003515.4| Drosophila melanogaster chromosome 3L, section 70 of 83 of the complete sequence Length = 234263 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 atttctccagtccttggagt 523 |||||||||||||||||||| Sbjct: 232519 atttctccagtccttggagt 232538
>dbj|AP001988.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-76A17, complete sequence Length = 141796 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 aagaaaatgagagacagaaa 549 |||||||||||||||||||| Sbjct: 69478 aagaaaatgagagacagaaa 69459
>emb|AL772310.27| Mouse DNA sequence from clone RP23-34B24 on chromosome 4, complete sequence Length = 211901 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 acaccttctttgaggttgtt 321 |||||||||||||||||||| Sbjct: 171019 acaccttctttgaggttgtt 171000
>dbj|AP003394.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-278J24, complete sequences Length = 164778 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 aagaaaatgagagacagaaa 549 |||||||||||||||||||| Sbjct: 2843 aagaaaatgagagacagaaa 2824
>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete sequence Length = 207223 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 acaccttctttgaggttgtt 321 |||||||||||||||||||| Sbjct: 36186 acaccttctttgaggttgtt 36167
>gb|AC004047.1|AC004047 Homo sapiens chromosome 4 clone B150J4 map 4q25, complete sequence Length = 134649 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 gaagaaaatgagagacagaa 548 |||||||||||||||||||| Sbjct: 127811 gaagaaaatgagagacagaa 127792
>dbj|AK116020.1| Ciona intestinalis cDNA, clone:citb004k05, full insert sequence Length = 1918 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tgaagcaatattaccttatg 433 |||||||||||||||||||| Sbjct: 1674 tgaagcaatattaccttatg 1693
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tccttcacctctcctctcct 92 |||||||||||||||||||| Sbjct: 125783 tccttcacctctcctctcct 125764
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 tcctctttattcagaaaaca 453 |||||||||||||||||||| Sbjct: 27271714 tcctctttattcagaaaaca 27271733
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 tcctctttattcagaaaaca 453 |||||||||||||||||||| Sbjct: 14434 tcctctttattcagaaaaca 14453
>gb|U14911.1|HSRGR1 Human RPE-retinal G protein coupled receptor (rgr) gene, exon 1 Length = 848 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 acctctcctctccttgccag 98 |||||||||||||||||||| Sbjct: 590 acctctcctctccttgccag 571
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ctggagatctggaacttgtt 255 |||||||||||||||||||| Sbjct: 47869 ctggagatctggaacttgtt 47888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,154,620 Number of Sequences: 3902068 Number of extensions: 6154620 Number of successful extensions: 125321 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125006 Number of HSP's gapped (non-prelim): 300 length of query: 644 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 621 effective length of database: 17,143,297,704 effective search space: 10645987874184 effective search space used: 10645987874184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)