ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baalm03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 541 bits (273), Expect = e-151 Identities = 450/509 (88%) Strand = Plus / Plus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 150 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 209 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 194 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 210 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 269 Query: 195 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 254 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 270 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 329 Query: 255 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 314 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 330 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 389 Query: 315 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 374 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 390 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 449 Query: 375 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 434 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 450 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 509 Query: 435 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 494 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 510 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 569 Query: 495 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 554 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 570 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 629 Query: 555 aacttgctcaaggggcagaccgttggagt 583 |||||||||||||| ||||| || ||||| Sbjct: 630 aacttgctcaagggtcagactgtgggagt 658
>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full insert sequence Length = 2837 Score = 541 bits (273), Expect = e-151 Identities = 450/509 (88%) Strand = Plus / Plus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 78 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 137 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 194 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 138 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 197 Query: 195 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 254 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 198 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 257 Query: 255 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 314 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 258 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 317 Query: 315 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 374 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 318 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 377 Query: 375 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 434 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 378 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 437 Query: 435 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 494 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 438 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 497 Query: 495 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 554 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 498 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 557 Query: 555 aacttgctcaaggggcagaccgttggagt 583 |||||||||||||| ||||| || ||||| Sbjct: 558 aacttgctcaagggtcagactgtgggagt 586
>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full insert sequence Length = 1662 Score = 541 bits (273), Expect = e-151 Identities = 450/509 (88%) Strand = Plus / Plus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 151 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 210 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 194 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 211 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 270 Query: 195 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 254 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 271 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 330 Query: 255 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 314 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 331 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 390 Query: 315 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 374 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 391 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 450 Query: 375 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 434 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 451 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 510 Query: 435 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 494 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 511 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 570 Query: 495 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 554 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 571 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 630 Query: 555 aacttgctcaaggggcagaccgttggagt 583 |||||||||||||| ||||| || ||||| Sbjct: 631 aacttgctcaagggtcagactgtgggagt 659
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 426 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 485 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 82214 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 82155 Query: 486 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 545 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 82154 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 82095 Query: 546 t 546 | Sbjct: 82094 t 82094 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 82804 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 82745 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 193 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 82744 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 82686 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 279 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 338 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 82443 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 82384 Query: 339 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 398 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 82383 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 82324 Query: 399 ggcatcgccatcggcaacacacctg 423 ||||||||| |||||||||| |||| Sbjct: 82323 ggcatcgccgtcggcaacacgcctg 82299 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 196 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 255 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 82594 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 82535 Query: 256 atcactgccacggtgtcatcggccag 281 ||| |||| | ||||||||||||||| Sbjct: 82534 atcgctgcgatggtgtcatcggccag 82509 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gggaacttgctcaaggggcagaccgttggagt 583 ||||||||||||||||| ||||| || ||||| Sbjct: 81997 gggaacttgctcaagggtcagactgtgggagt 81966
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 426 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 485 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 76823 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 76764 Query: 486 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 545 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 76763 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 76704 Query: 546 t 546 | Sbjct: 76703 t 76703 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 77413 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 77354 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 193 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 77353 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 77295 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 279 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 338 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 77052 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 76993 Query: 339 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 398 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 76992 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 76933 Query: 399 ggcatcgccatcggcaacacacctg 423 ||||||||| |||||||||| |||| Sbjct: 76932 ggcatcgccgtcggcaacacgcctg 76908 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 196 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 255 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 77203 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 77144 Query: 256 atcactgccacggtgtcatcggccag 281 ||| |||| | ||||||||||||||| Sbjct: 77143 atcgctgcgatggtgtcatcggccag 77118 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gggaacttgctcaaggggcagaccgttggagt 583 ||||||||||||||||| ||||| || ||||| Sbjct: 76606 gggaacttgctcaagggtcagactgtgggagt 76575
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 426 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 485 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 31241 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 31182 Query: 486 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 545 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31181 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 31122 Query: 546 t 546 | Sbjct: 31121 t 31121 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 75 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 134 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 31831 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 31772 Query: 135 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 193 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 31771 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 31713 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 279 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 338 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 31470 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 31411 Query: 339 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 398 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 31410 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 31351 Query: 399 ggcatcgccatcggcaacacacctg 423 ||||||||| |||||||||| |||| Sbjct: 31350 ggcatcgccgtcggcaacacgcctg 31326 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 196 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 255 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 31621 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 31562 Query: 256 atcactgccacggtgtcatcggccag 281 ||| |||| | ||||||||||||||| Sbjct: 31561 atcgctgcgatggtgtcatcggccag 31536 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 552 gggaacttgctcaaggggcagaccgttggagt 583 ||||||||||||||||| ||||| || ||||| Sbjct: 31024 gggaacttgctcaagggtcagactgtgggagt 30993
>ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT1G68010 (HPR) mRNA, complete cds Length = 1494 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 318 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 377 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 378 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 437 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 438 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 497 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 498 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 557 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 558 ggacagactgttggagttattg 579
>gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate reductase (At1g68010) mRNA, complete cds Length = 1192 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 253 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 312 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 313 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 372 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 373 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 432 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 433 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 492 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 493 ggacagactgttggagttattg 514
>gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate reductase HPR (At1g68010) mRNA, complete cds Length = 1417 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 318 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 377 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 378 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 437 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 438 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 497 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 498 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 557 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 558 ggacagactgttggagttattg 579
>dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate reductase, complete cds Length = 1428 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 333 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 392 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 393 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 452 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 453 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 512 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 513 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 572 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 573 ggacagactgttggagttattg 594
>gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1376 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 310 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 369 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 370 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 429 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 430 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 489 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 490 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 549 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 550 ggacagactgttggagttattg 571
>emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 283 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 342 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 343 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 402 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 403 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 462 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 463 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 522 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 523 ggacagactgttggagttattg 544
>gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1194 Score = 67.9 bits (34), Expect = 4e-08 Identities = 205/262 (78%) Strand = Plus / Plus Query: 327 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 386 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 253 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 312 Query: 387 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 446 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 313 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 372 Query: 447 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 506 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 373 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 432 Query: 507 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 566 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 433 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 492 Query: 567 gggcagaccgttggagtgattg 588 || ||||| |||||||| |||| Sbjct: 493 ggacagactgttggagttattg 514
>gb|U01067.1|PUMHPR Cucurbita pepo Halloween NADH-dependent hydroxypyruvate reductase mRNA, partial cds Length = 815 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 483 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 542 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 312 aggatcgttgaagctgacgagttcatgagggcaggccgctatgatggatggcttccaaat 371 Query: 543 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattg 588 |||||||||| |||||||| || || ||||| ||||| ||||||| Sbjct: 372 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattg 417
>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1362 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 483 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 542 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 439 aggatcgttgaagctgacgagttcatgagggcaggccactatgatggatggcttccaaat 498 Query: 543 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattg 588 |||||||||| |||||||| || || ||||| ||||| ||||||| Sbjct: 499 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattg 544 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 gtgagcaccaagtccatgcctggcacccgctggatcaa 166 |||||||||||| | |||||||| || ||||||||||| Sbjct: 85 gtgagcaccaagcctatgcctggaactcgctggatcaa 122
>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1269 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 483 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 542 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 439 aggatcgttgaagctgacgagttcatgagggcaggccactatgatggatggcttccaaat 498 Query: 543 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattg 588 |||||||||| |||||||| || || ||||| ||||| ||||||| Sbjct: 499 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattg 544 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 129 gtgagcaccaagtccatgcctggcacccgctggatcaa 166 |||||||||||| | |||||||| || ||||||||||| Sbjct: 85 gtgagcaccaagcctatgcctggaactcgctggatcaa 122
>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC 1.1.1.29) Length = 1437 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 544 tgtttgttgggaacttgctcaaggggcagaccgttggagtgattg 588 ||||||||||||||||||| || || ||||| ||||| ||||||| Sbjct: 510 tgtttgttgggaacttgctgaaaggacagactgttggtgtgattg 554
>gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1414 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 528 ggatggctcccgcacctgtttgttgggaacttgctcaaggggcagaccgttgg 580 |||||||| || || || |||||||| ||||||||||||||||| || ||||| Sbjct: 496 ggatggctacctcatctatttgttggaaacttgctcaaggggcaaacagttgg 548 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 93 attgaggtgtggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggc 152 |||||||| ||||||||||| ||||| ||| | || || |||||||| | |||||||| Sbjct: 61 attgaggtatggaacccaagtggcaaatacagagttgtcagcaccaaaccaatgcctgga 120 Query: 153 acccgctggatcaa 166 || || |||||||| Sbjct: 121 actcgttggatcaa 134
>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete cds Length = 1576 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 504 ttcatgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctc 563 ||||||||||| ||| | || || ||||||||||| | |||||||||| ||||||||| Sbjct: 464 ttcatgagggcaggcttatatgatggatggctccctaatttgtttgttggaaacttgctc 523 Query: 564 aaggggcagaccgttgg 580 || || ||||| ||||| Sbjct: 524 aaaggacagactgttgg 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 102 tggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggcacccgctgg 161 ||||||||||| || | |||| | || || |||||||| ||||||| || ||||||||| Sbjct: 62 tggaacccaagaggaaggtacagagtagttagcaccaaacccatgcccggaacccgctgg 121 Query: 162 atcaa 166 ||||| Sbjct: 122 atcaa 126
>emb|X58542.1|CSHPRAG C.sativus hpr-A gene for NADH-dependent hydroxypyruvate reductase Length = 6740 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 545 gtttgttgggaacttgctcaaggggcagaccgttggagtgattg 588 |||||||||||||||||| || || ||||| ||||| ||||||| Sbjct: 3179 gtttgttgggaacttgctgaaaggacagactgttggtgtgattg 3222
>emb|AJ879065.1| Capsicum chinense partial mRNA for ABC transporter protein Length = 848 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 tcccctccttgcagctgctgcc 59 |||||||||||||||||||||| Sbjct: 164 tcccctccttgcagctgctgcc 143
>gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1492 Score = 44.1 bits (22), Expect = 0.51 Identities = 70/86 (81%) Strand = Plus / Plus Query: 483 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 542 ||||| |||||||| || | ||||||||||| || | || || |||||||| || || Sbjct: 453 aggatagttgaggcagatgagttcatgagggcaggattatatgatggatggctacctcat 512 Query: 543 ctgtttgttgggaacttgctcaaggg 568 || |||||||| |||||||||||||| Sbjct: 513 ctatttgttggaaacttgctcaaggg 538 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 93 attgaggtgtggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggc 152 |||||||| ||||||||||| ||||| ||| | || || |||||||| | |||||||| Sbjct: 63 attgaggtatggaacccaagtggcaaatacagagttgttagcaccaaaccaatgcctgga 122 Query: 153 acccgctggatcaa 166 || || |||||||| Sbjct: 123 actcgttggatcaa 136
>ref|XM_418106.1| PREDICTED: Gallus gallus similar to ets domain protein (LOC419983), mRNA Length = 2681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 gcagctgctgcccgcctgctc 68 ||||||||||||||||||||| Sbjct: 580 gcagctgctgcccgcctgctc 560
>ref|XM_845102.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-2, transcript variant 1 (LOC607779), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 gcggagctggcggcgtctctg 464 ||||||||||||||||||||| Sbjct: 559 gcggagctggcggcgtctctg 579
>ref|XM_855787.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-2, transcript variant 2 (LOC607779), mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 gcggagctggcggcgtctctg 464 ||||||||||||||||||||| Sbjct: 493 gcggagctggcggcgtctctg 513
>ref|XM_745604.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g08060) partial mRNA Length = 231 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cctctccgtcgacgacatcct 241 ||||||||||||||||||||| Sbjct: 152 cctctccgtcgacgacatcct 172
>gb|DQ438981.1| Klebsiella oxytoca D-lactate dehydrogenase (ldhA) gene, complete cds Length = 990 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 359 cgggtacaacaacgttgacgtcgatgctgccaa 391 ||||| ||||||||||||| ||||||| ||||| Sbjct: 231 cgggttcaacaacgttgacctcgatgccgccaa 263
>gb|AC125435.8| Homo sapiens chromosome 15, clone CTD-2235H24, complete sequence Length = 124255 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tgaggtgtggaacccaagcgg 115 ||||||||||||||||||||| Sbjct: 97940 tgaggtgtggaacccaagcgg 97960
>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence Length = 206482 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tgaggtgtggaacccaagcgg 115 ||||||||||||||||||||| Sbjct: 17788 tgaggtgtggaacccaagcgg 17808
>gb|AY842251.1| Chlamydomonas reinhardtii hydroxypyruvate reductase mRNA, partial cds Length = 931 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 gagacgacggcggagctggc 454 |||||||||||||||||||| Sbjct: 226 gagacgacggcggagctggc 245
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 actggggggaagtgctcttc 311 |||||||||||||||||||| Sbjct: 84787 actggggggaagtgctcttc 84806
>ref|XM_418173.1| PREDICTED: Gallus gallus fibrillin-3 precursor (LOC395079), mRNA Length = 9180 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agcttgtttgtttcccctcc 45 |||||||||||||||||||| Sbjct: 5915 agcttgtttgtttcccctcc 5934
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence Length = 177050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 ttgttgggaacttgctcaag 566 |||||||||||||||||||| Sbjct: 58964 ttgttgggaacttgctcaag 58983
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cttgtttgtttcccctcctt 47 |||||||||||||||||||| Sbjct: 82001 cttgtttgtttcccctcctt 81982
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcaagtaccgcgtggtg 131 |||||||||||||||||||| Sbjct: 2725274 gcggcaagtaccgcgtggtg 2725293
>gb|AE017159.1| Chlamydophila pneumoniae TW-183, section 3 of 4 of the complete genome Length = 300066 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agaagaagaccatcctctcc 227 |||||||||||||||||||| Sbjct: 262535 agaagaagaccatcctctcc 262516
>emb|AL049649.7|HSJ734C18 Human DNA sequence from clone RP4-734C18 on chromosome 20 Contains a putative novel gene, ESTs, STSs, GSSs and genomic marker D20S6, complete sequence Length = 135636 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ggcaacacacctggggttct 430 |||||||||||||||||||| Sbjct: 124976 ggcaacacacctggggttct 124957
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 cggcatcgccatcggcaaca 417 |||||||||||||||||||| Sbjct: 150262 cggcatcgccatcggcaaca 150281
>emb|AL672199.16| Mouse DNA sequence from clone RP23-171O21 on chromosome 11 Contains the Srcasm gene for Src activating and signaling molecule and the 3' end of a novel gene, complete sequence Length = 150260 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccctccttgcagctgctgcc 59 |||||||||||||||||||| Sbjct: 25755 ccctccttgcagctgctgcc 25774
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gatcaagctcctcactgaca 180 |||||||||||||||||||| Sbjct: 695112 gatcaagctcctcactgaca 695131
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 gagacgacggcggagctggc 454 |||||||||||||||||||| Sbjct: 3006119 gagacgacggcggagctggc 3006138
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 agaagaagaccatcctctcc 227 |||||||||||||||||||| Sbjct: 1205047 agaagaagaccatcctctcc 1205066
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcaagtaccgcgtggtg 131 |||||||||||||||||||| Sbjct: 3428298 gcggcaagtaccgcgtggtg 3428279
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 40.1 bits (20), Expect = 8.0 Identities = 83/104 (79%) Strand = Plus / Minus Query: 432 actgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgtt 491 |||||||||||||| || || || || ||||| || |||| ||||| | || || ||| Sbjct: 50343 actgagacgacggctgaactagctgcttctctttccttggctgctgcaagaagaattgtt 50284 Query: 492 gaggccgaccaattcatgagggctggcctctacgacggatggct 535 || |||||| |||||||||| | |||| | ||||| |||||||| Sbjct: 50283 gaagccgacgaattcatgagaggtggcttgtacgagggatggct 50240
>dbj|AK053655.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130119A05 product:macrophage stimulating 1 receptor (c-met-related tyrosine kinase), full insert sequence Length = 4719 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gacatcctggctctcatcgg 253 |||||||||||||||||||| Sbjct: 3625 gacatcctggctctcatcgg 3644
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agaagaagaccatcctctcc 227 |||||||||||||||||||| Sbjct: 866396 agaagaagaccatcctctcc 866377
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agaagaagaccatcctctcc 227 |||||||||||||||||||| Sbjct: 865717 agaagaagaccatcctctcc 865698
>emb|BX296539.5| Zebrafish DNA sequence from clone DKEYP-13E2 in linkage group 15, complete sequence Length = 135623 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gtgtggaacccaagcggcaa 118 |||||||||||||||||||| Sbjct: 42030 gtgtggaacccaagcggcaa 42011 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,213,899 Number of Sequences: 3902068 Number of extensions: 4213899 Number of successful extensions: 70428 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 70071 Number of HSP's gapped (non-prelim): 381 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
