Clone Name | baalk08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 448 bits (226), Expect = e-122 Identities = 334/370 (90%) Strand = Plus / Plus Query: 98 aaacctcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgat 157 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 145 aaacctcaacaaccaagtttcatgtctgatctcgacgtccagcttccatctgcctttgat 204 Query: 158 ccttttgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtg 217 || ||||||||||||||||||||||| ||||||| || || || | || ||||||||| Sbjct: 205 ccgtttgctgaggcaaatgctgaggactctggtgctggtcctggaacgaaggattatgtg 264 Query: 218 catgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaag 277 ||||||||||||||||||||||||||||| |||||||||||||| || ||||| || ||| Sbjct: 265 catgtgcgcatccagcagcgcaacggcagaaagagtctgactacagtccagggtctgaag 324 Query: 278 aaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggc 337 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 325 aaagagttcagctataacaagatcctcaaggatctgaagaaggaattctgctgcaatggt 384 Query: 338 acagtagtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaag 397 || ||||| ||||| || ||||||||||||||||||||||| || ||||| ||||| ||| Sbjct: 385 actgtagttcaggacccagagctaggccaggtcattcagctccaaggtgaccagcgcaag 444 Query: 398 aatgttgctactttcctagtccaggctgggattgcgaagaaggagctcatcaagatccac 457 |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| ||| Sbjct: 445 aatgttgctactttcctagttcaggctgggattgcgaagaaagagaacatcaagattcac 504 Query: 458 ggcttctaag 467 || ||||||| Sbjct: 505 gggttctaag 514 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 575 cttgcttgatgcaagttgtgtt 596 |||||||||||||||||||||| Sbjct: 642 cttgcttgatgcaagttgtgtt 663
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 440 bits (222), Expect = e-120 Identities = 330/366 (90%) Strand = Plus / Plus Query: 103 tcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttt 162 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 822 tcaacaaacaagtttcatgtctgatctcgacgttcagcttccatctgccttcgatccgtt 881 Query: 163 tgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgt 222 ||||||||||||||||||||| | || || ||||| || ||||| |||||||||||||| Sbjct: 882 tgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattatgtgcatgt 941 Query: 223 gcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaaga 282 |||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| || Sbjct: 942 gcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggcttaaagaagga 1001 Query: 283 gttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagt 342 || ||| ||||||||||||||||||||||| || ||||| |||||||||||||| || || Sbjct: 1002 gtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaatggtactgt 1061 Query: 343 agtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgt 402 |||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1062 agtccaagatccagagcttggccaggtcattcagcttcaaggtgatcagcgtaagaatgt 1121 Query: 403 tgctactttcctagtccaggctgggattgcgaagaaggagctcatcaagatccacggctt 462 ||| || |||||||| |||||||||||||| |||||||| ||||||||| ||||| || Sbjct: 1122 tgccacgttcctagttcaggctgggattgctaagaaggacaacatcaagattcacggttt 1181 Query: 463 ctaagc 468 |||||| Sbjct: 1182 ctaagc 1187 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tcttgcttgatgcaagttgtgt 595 |||||||||||||||||||||| Sbjct: 1307 tcttgcttgatgcaagttgtgt 1328
>dbj|AK058219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F05, full insert sequence Length = 731 Score = 432 bits (218), Expect = e-118 Identities = 329/366 (89%) Strand = Plus / Plus Query: 103 tcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttt 162 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 143 tcaacaaacaagtttcatgtctgatctcgacgttcagcttccatctgccttcgatccgtt 202 Query: 163 tgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgt 222 ||||||||||||||||||||| | || || ||||| || ||||| |||||||||||||| Sbjct: 203 tgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattatgtgcatgt 262 Query: 223 gcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaaga 282 | |||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| || Sbjct: 263 gtgcatccagcagcgcaacggcagaaagagtctaactactgttcagggcttaaagaagga 322 Query: 283 gttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagt 342 || ||| ||||||||||||||||||||||| || ||||| |||||||||||||| || || Sbjct: 323 gtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaatggtactgt 382 Query: 343 agtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgt 402 |||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 383 agtccaagatccagagcttggccaggtcattcagcttcaaggtgatcagcgtaagaatgt 442 Query: 403 tgctactttcctagtccaggctgggattgcgaagaaggagctcatcaagatccacggctt 462 ||| || |||||||| |||||||||||||| |||||||| ||||||||| ||||| || Sbjct: 443 tgccacgttcctagttcaggctgggattgctaagaaggacaacatcaagattcacggttt 502 Query: 463 ctaagc 468 |||||| Sbjct: 503 ctaagc 508 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tcttgcttgatgcaagttgtgt 595 |||||||||||||||||||||| Sbjct: 628 tcttgcttgatgcaagttgtgt 649
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 412 bits (208), Expect = e-112 Identities = 313/348 (89%) Strand = Plus / Plus Query: 119 atgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaatgct 178 |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 atgtctgatctcgacgttcagcttccatctgccttcgatccgtttgctgaggcaaatgct 60 Query: 179 gaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagcagcgc 238 ||||| | || || ||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 61 gaggactccggcgctggccctggagcaaaggattatgtgcatgtgcgcatccagcagcgc 120 Query: 239 aacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaacaag 298 |||||||| |||||||| ||||||||||||||| ||||||| |||| ||| ||||||||| Sbjct: 121 aacggcagaaagagtctaactactgttcagggcttaaagaaggagtacagttacaacaag 180 Query: 299 atcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcccgag 358 |||||||||||||| || ||||| |||||||||||||| || |||||||| ||||| ||| Sbjct: 181 atcctcaaggatctgaaaaaggagttctgctgcaatggtactgtagtccaagatccagag 240 Query: 359 ctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtc 418 || |||||||||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 241 cttggccaggtcattcagcttcaaggtgatcagcgtaagaatgttgccacgttcctagtt 300 Query: 419 caggctgggattgcgaagaaggagctcatcaagatccacggcttctaa 466 |||||||||||||| |||||||| ||||||||| ||||| |||||| Sbjct: 301 caggctgggattgctaagaaggacaacatcaagattcacggtttctaa 348
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 313 bits (158), Expect = 4e-82 Identities = 281/322 (87%) Strand = Plus / Plus Query: 102 ctcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgatcctt 161 ||||| ||| |||||||||||||||||||||||| |||||||||||| || ||||| | Sbjct: 156 ctcaagaactaagtttcatgtctgatctcgacgtccagcttccatctgcttttgatccgt 215 Query: 162 ttgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatg 221 |||| ||||||||||||||||| | |||| || | || |||| || |||||||| | Sbjct: 216 ttgcagaggcaaatgctgaggactccagtgctggtgctggatcaaaggactatgtgcacg 275 Query: 222 tgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaag 281 |||| || |||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 276 tgcgtattcagcagcgcaacggaaggaagagtctgacaactgttcagggcttgaagaaag 335 Query: 282 agttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacag 341 ||| |||||||||||||||||||||||||||||| || || |||||||||||||| || | Sbjct: 336 agtacagctacaacaagatcctcaaggatctcaaaaaagagttctgctgcaatggtactg 395 Query: 342 tagtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatg 401 ||||||||||||| |||||||||||||||||||| || || |||||||||||||| |||| Sbjct: 396 tagtccaggatccagagctaggccaggtcattcaactgcaaggtgatcagcgtaaaaatg 455 Query: 402 ttgctactttcctagtccaggc 423 | |||||||| ||||||||||| Sbjct: 456 tcgctacttttctagtccaggc 477
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 155 gatccttttgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattat 214 ||||| ||||||||||||||||||||||| | || || ||||| || ||||| |||||| Sbjct: 79741 gatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattat 79800 Query: 215 gtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggccta 274 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || Sbjct: 79801 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggctta 79860 Query: 275 aagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaat 334 ||||| |||| ||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 79861 aagaaggagtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaat 79920 Query: 335 ggcacagtagtccaggatcccgagctaggccaggt 369 || || |||||||| ||||| ||||| |||||||| Sbjct: 79921 ggtactgtagtccaagatccagagcttggccaggt 79955 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccagg 422 ||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||| Sbjct: 80030 caggtcattcagcttcaaggtgatcagcgtaagaatgttgccacgttcctagttcagg 80087 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 103 tcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcg 155 ||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 79365 tcaacaaacaagtttcatgtctgatctcgacgttcagcttccatctgccttcg 79417 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 420 aggctgggattgcgaagaaggagctcatcaagatccacggcttctaagc 468 ||||||||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 80188 aggctgggattgctaagaaggacaacatcaagattcacggtttctaagc 80236 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tcttgcttgatgcaagttgtgt 595 |||||||||||||||||||||| Sbjct: 80356 tcttgcttgatgcaagttgtgt 80377
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 155 gatccttttgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattat 214 ||||| ||||||||||||||||||||||| | || || ||||| || ||||| |||||| Sbjct: 24393951 gatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattat 24394010 Query: 215 gtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggccta 274 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || Sbjct: 24394011 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggctta 24394070 Query: 275 aagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaat 334 ||||| |||| ||| ||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 24394071 aagaaggagtacagttacaacaagatcctcaaggatctgaaaaaggagttctgctgcaat 24394130 Query: 335 ggcacagtagtccaggatcccgagctaggccaggt 369 || || |||||||| ||||| ||||| |||||||| Sbjct: 24394131 ggtactgtagtccaagatccagagcttggccaggt 24394165 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccagg 422 ||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||| Sbjct: 24394240 caggtcattcagcttcaaggtgatcagcgtaagaatgttgccacgttcctagttcagg 24394297 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 103 tcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcg 155 ||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 24393575 tcaacaaacaagtttcatgtctgatctcgacgttcagcttccatctgccttcg 24393627 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 420 aggctgggattgcgaagaaggagctcatcaagatccacggcttctaagc 468 ||||||||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 24394398 aggctgggattgctaagaaggacaacatcaagattcacggtttctaagc 24394446 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgttg 404 |||||||||||||| | || |||||| |||||||||||| Sbjct: 6164270 aggtcattcagctttaaggcgatcagtgtaagaatgttg 6164308 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 agattatgtgcatgtgcgcatccagca 234 |||||||||||||||| |||||||||| Sbjct: 6164051 agattatgtgcatgtgtgcatccagca 6164077 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tcttgcttgatgcaagttgtgt 595 |||||||||||||||||||||| Sbjct: 24394566 tcttgcttgatgcaagttgtgt 24394587
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 155 gatccttttgctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattat 214 ||||| |||||||||||||||||||||| ||||||| || || || | || |||||| Sbjct: 337 gatccgtttgctgaggcaaatgctgagggctctggtgctggtcctggaacgaaggattat 396 Query: 215 gtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggccta 274 |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| || Sbjct: 397 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctgactacagtccagggtctg 456 Query: 275 aagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaat 334 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 457 aagaaggagttcagctataacaagatcctcaaggatctgaagaaggaattctgctgcaat 516 Query: 335 ggcacagtagtccaggatcccgagctaggccaggt 369 || || ||||| ||||| || |||||||||||||| Sbjct: 517 ggtactgtagttcaggacccagagctaggccaggt 551 Score = 65.9 bits (33), Expect = 2e-07 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 97 caaacctcaacaaccaagtttcatgtctgatctcgacgttacgcttccatctgcctt 153 ||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 91 caaacctcaccaaccaagtttcatgtct-atctcgacgtccagcttccatctgcctt 146
>ref|NM_190883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 220 bits (111), Expect = 4e-54 Identities = 186/211 (88%) Strand = Plus / Plus Query: 212 tatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||| || |||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 94 tatgtacacgtgcgcattcagcagcgcaacggaagaaagagtctgactactgttcagggc 153 Query: 272 ctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgc 331 | |||||||||| ||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 154 ttgaagaaagagtacagttacaacaaaatcctcaaggatctgaaaaaggaattctgttgt 213 Query: 332 aatggcacagtagtccaggatcccgagctaggccaggtcattcagcttcagggtgatcag 391 ||||| || |||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 214 aatggtactgtagtccaagatccagagttaggccaggtcattcaacttcaaggtgatcag 273 Query: 392 cgtaagaatgttgctactttcctagtccagg 422 ||||| |||||||| || |||||||| |||| Sbjct: 274 cgtaaaaatgttgcgacgttcctagttcagg 304 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 119 atgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaatgct 178 ||||||||||||||||| ||||||||| || || ||||| ||||| || || |||||| Sbjct: 1 atgtctgatctcgacgtccagcttccatcagcttttgatccgtttgcggaagccaatgct 60 Query: 179 gagga 183 ||||| Sbjct: 61 gagga 65
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 198 bits (100), Expect = 2e-47 Identities = 277/336 (82%) Strand = Plus / Plus Query: 115 tttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaa 174 ||||||||||||||| ||| || | | ||| ||||||||||||| ||| ||||||| || Sbjct: 164 tttcatgtctgatcttgacattcagatcccaactgccttcgatcccttttctgaggccaa 223 Query: 175 tgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagca 234 ||||| ||| ||||||| | | || |||| || || || ||||||||||||||||| Sbjct: 224 tgctggggactctggtgcggctgcaggatcaaaggactacgttcatgtgcgcatccagca 283 Query: 235 gcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaa 294 ||| || || | ||||||||||| ||||||||||| | ||||| || ||||||||||| Sbjct: 284 gcgtaatggtcgcaagagtctgacgactgttcagggtttgaagaaggaattcagctacaa 343 Query: 295 caagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcc 354 ||||||||| || || ||||||||||| |||||||||||||| ||||| |||||||| || Sbjct: 344 caagatcctgaaagacctcaagaaggagttctgctgcaatggtacagttgtccaggaccc 403 Query: 355 cgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcct 414 ||||| || ||||||||||| ||||||||||||||| | ||||| || | | |||||| Sbjct: 404 agagcttggacaggtcattcaacttcagggtgatcagaggaagaacgtctcaaatttcct 463 Query: 415 agtccaggctgggattgcgaagaaggagctcatcaa 450 |||||||| || |||| ||| ||||||| |||||| Sbjct: 464 tgtccaggccggcattgtgaaaaaggagcacatcaa 499
>gb|BT016285.1| Zea mays clone Contig118 mRNA sequence Length = 861 Score = 196 bits (99), Expect = 6e-47 Identities = 279/339 (82%) Strand = Plus / Plus Query: 115 tttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaa 174 ||||||||||||||||||| || | | ||| ||||||||||||| || |||||||| || Sbjct: 242 tttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaa 301 Query: 175 tgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagca 234 ||||| ||| ||||||| | | || |||| || || || || |||||||||||||| Sbjct: 302 tgctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagca 361 Query: 235 gcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaa 294 ||| || || | ||||| |||||||| || ||||| | ||||| ||||||||||||| Sbjct: 362 gcgtaatggtcgcaagagcctgactaccgtccagggattgaagaaggagttcagctacag 421 Query: 295 caagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcc 354 |||||||||||| ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 422 caagatcctcaaagatctcaagaaagagttctgctgcaatggtacagtggtccaggaccc 481 Query: 355 cgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcct 414 || || || |||||||||||||| |||||||||||| | ||||| || | | |||||| Sbjct: 482 agaacttggacaggtcattcagctccagggtgatcagaggaagaacgtctcgaatttcct 541 Query: 415 agtccaggctgggattgcgaagaaggagctcatcaagat 453 |||||||| || |||| ||||||||||| ||||||||| Sbjct: 542 cgtccaggccggcattgtgaagaaggagcacatcaagat 580
>gb|AY103847.1| Zea mays PCO105184 mRNA sequence Length = 1006 Score = 196 bits (99), Expect = 6e-47 Identities = 279/339 (82%) Strand = Plus / Plus Query: 115 tttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaa 174 ||||||||||||||||||| || | | ||| ||||||||||||| || |||||||| || Sbjct: 360 tttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaa 419 Query: 175 tgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagca 234 ||||| ||| ||||||| | | || |||| || || || || |||||||||||||| Sbjct: 420 tgctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagca 479 Query: 235 gcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaa 294 ||| || || | ||||| |||||||| || ||||| | ||||| ||||||||||||| Sbjct: 480 gcgtaatggtcgcaagagcctgactaccgtccagggattgaagaaggagttcagctacag 539 Query: 295 caagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcc 354 |||||||||||| ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 540 caagatcctcaaagatctcaagaaagagttctgctgcaatggtacagtggtccaggaccc 599 Query: 355 cgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcct 414 || || || |||||||||||||| |||||||||||| | ||||| || | | |||||| Sbjct: 600 agaacttggacaggtcattcagctccagggtgatcagaggaagaacgtctcgaatttcct 659 Query: 415 agtccaggctgggattgcgaagaaggagctcatcaagat 453 |||||||| || |||| ||||||||||| ||||||||| Sbjct: 660 cgtccaggccggcattgtgaagaaggagcacatcaagat 698
>gb|AF034944.1|AF034944 Zea mays translation initiation factor GOS2 (TIF) mRNA, complete cds Length = 759 Score = 188 bits (95), Expect = 2e-44 Identities = 278/339 (82%) Strand = Plus / Plus Query: 115 tttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaa 174 ||||||||||||||||||| || | | ||| ||||||||||||| || |||||||| || Sbjct: 132 tttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaa 191 Query: 175 tgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagca 234 ||||| ||| ||||||| | | || |||| || || || || |||||||||||||| Sbjct: 192 tgctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagca 251 Query: 235 gcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaa 294 ||| || || | ||||| ||||| || || ||||| | ||||| ||||||||||||| Sbjct: 252 gcgtaatggtcgcaagagcctgaccaccgtccagggattgaagaaggagttcagctacag 311 Query: 295 caagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcc 354 |||||||||||| ||||||||||| || |||||||||||||| ||||| |||||||| || Sbjct: 312 caagatcctcaaagatctcaagaaagagttctgctgcaatggtacagtggtccaggaccc 371 Query: 355 cgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcct 414 || || || |||||||||||||| |||||||||||| | ||||| || | | |||||| Sbjct: 372 agaacttggacaggtcattcagctccagggtgatcagaggaagaacgtctcgaatttcct 431 Query: 415 agtccaggctgggattgcgaagaaggagctcatcaagat 453 |||||||| || |||| ||||||||||| ||||||||| Sbjct: 432 cgtccaggccggcattgtgaagaaggagcacatcaagat 470
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 186 bits (94), Expect = 6e-44 Identities = 211/250 (84%) Strand = Plus / Plus Query: 204 caaaagattatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactg 263 ||||||| || || ||||| |||||||||||||| || ||| | |||||||||||||||| Sbjct: 26 caaaagactacgtccatgtacgcatccagcagcgtaatggccgcaagagtctgactactg 85 Query: 264 ttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaat 323 | |||||| | ||||| || |||||||||| ||||||||||| ||||||||||| || | Sbjct: 86 tccagggcttgaagaaggaattcagctacagtaagatcctcaaagatctcaagaaagagt 145 Query: 324 tctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattcagcttcagg 383 | ||||||||||| ||||| |||||||| || ||||| |||||||||||||| || |||| Sbjct: 146 tttgctgcaatggtacagttgtccaggacccagagcttggccaggtcattcaactccagg 205 Query: 384 gtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcgaagaaggagc 443 |||||||| | ||||| || | | |||||| ||||||||||| |||| ||| ||||| | Sbjct: 206 gtgatcagaggaagaacgtctcaaatttcctcgtccaggctggcattgtgaaaaaggaac 265 Query: 444 tcatcaagat 453 ||||||||| Sbjct: 266 acatcaagat 275
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 182 bits (92), Expect = 9e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 149 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 208 Query: 172 aaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatcca 231 ||||||| || ||||||| | | || |||| || || || ||||| |||||||| Sbjct: 209 caatgctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatcca 268 Query: 232 gcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagcta 291 |||||| || ||| | ||||| ||||| ||||| ||||| | ||||| || |||||||| Sbjct: 269 gcagcgtaatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagcta 328 Query: 292 caacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccagga 351 ||||||||||||||| ||||||||||| || || ||||||||||| || || |||||||| Sbjct: 329 caacaagatcctcaaagatctcaagaaagagttttgctgcaatggtactgttgtccagga 388 Query: 352 tcccgagctaggccaggtcattcagcttcagggtgatcag 391 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 389 cccagagcttggccaggtcattcaacttcagggtgatcag 428
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 182 bits (92), Expect = 9e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 172 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 231 Query: 172 aaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatcca 231 ||||||| || ||||||| | | || |||| || || || ||||| |||||||| Sbjct: 232 caatgctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatcca 291 Query: 232 gcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagcta 291 |||||| || ||| | ||||| ||||| ||||| ||||| | ||||| || |||||||| Sbjct: 292 gcagcgtaatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagcta 351 Query: 292 caacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccagga 351 ||||||||||||||| ||||||||||| || || ||||||||||| || || |||||||| Sbjct: 352 caacaagatcctcaaagatctcaagaaagagttttgctgcaatggtactgttgtccagga 411 Query: 352 tcccgagctaggccaggtcattcagcttcagggtgatcag 391 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 412 cccagagcttggccaggtcattcaacttcagggtgatcag 451
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 182 bits (92), Expect = 9e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 695 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 754 Query: 172 aaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatcca 231 ||||||| || ||||||| | | || |||| || || || ||||| |||||||| Sbjct: 755 caatgctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatcca 814 Query: 232 gcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagcta 291 |||||| || ||| | ||||| ||||| ||||| ||||| | ||||| || |||||||| Sbjct: 815 gcagcgtaatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagcta 874 Query: 292 caacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccagga 351 ||||||||||||||| ||||||||||| || || ||||||||||| || || |||||||| Sbjct: 875 caacaagatcctcaaagatctcaagaaagagttttgctgcaatggtactgttgtccagga 934 Query: 352 tcccgagctaggccaggtcattcagcttcagggtgatcag 391 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 935 cccagagcttggccaggtcattcaacttcagggtgatcag 974
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 182 bits (92), Expect = 9e-43 Identities = 233/280 (83%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 152 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 211 Query: 172 aaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatcca 231 ||||||| || ||||||| | | || |||| || || || ||||| |||||||| Sbjct: 212 caatgctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatcca 271 Query: 232 gcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagcta 291 |||||| || ||| | ||||| ||||| ||||| ||||| | ||||| || |||||||| Sbjct: 272 gcagcgtaatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagcta 331 Query: 292 caacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccagga 351 ||||||||||||||| ||||||||||| || || ||||||||||| || || |||||||| Sbjct: 332 caacaagatcctcaaagatctcaagaaagagttttgctgcaatggtactgttgtccagga 391 Query: 352 tcccgagctaggccaggtcattcagcttcagggtgatcag 391 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 392 cccagagcttggccaggtcattcaacttcagggtgatcag 431
>gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 Score = 172 bits (87), Expect = 9e-40 Identities = 276/339 (81%) Strand = Plus / Plus Query: 115 tttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaa 174 ||||||||||||||| |||||| | | ||| ||||||| || || ||||| ||||| || Sbjct: 132 tttcatgtctgatcttgacgttcagatcccaactgcctttgacccctttgccgaggcgaa 191 Query: 175 tgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagca 234 ||||| ||| |||||||||| |||| ||||||| || || ||||| ||||||||||| Sbjct: 192 tgctggggacgctggtgcagctgccggatcaaaagactacgttcatgtacgcatccagca 251 Query: 235 gcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaa 294 ||| || || | ||||| ||||| ||||| ||||| || ||||| ||||||||||||| Sbjct: 252 gcgtaatggtcgcaagagcctgaccactgtccagggtctgaagaaggagttcagctacag 311 Query: 295 caagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcc 354 |||||||||||| || |||||||| || || ||||||||||| ||||| |||||||| | Sbjct: 312 caagatcctcaaagacctcaagaaagagttttgctgcaatggtacagttgtccaggacac 371 Query: 355 cgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcct 414 || || || ||||||||||| || |||||||||||| | ||||| || | | ||||| Sbjct: 372 agaacttggacaggtcattcaactccagggtgatcagaggaagaacgtctcaaacttcct 431 Query: 415 agtccaggctgggattgcgaagaaggagctcatcaagat 453 |||||||| || |||| ||||||||| | ||||||||| Sbjct: 432 tgtccaggccggcattgtgaagaaggaacacatcaagat 470
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 168 bits (85), Expect = 1e-38 Identities = 226/273 (82%) Strand = Plus / Plus Query: 119 atgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggcaaatgct 178 ||||||||||||||| || | | ||| ||||||||||||| ||||||||||| |||||| Sbjct: 1 atgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaatgct 60 Query: 179 gaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatccagcagcgc 238 | || ||||||| | | || |||| || || || ||||| |||||||||||||| Sbjct: 61 ggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcagcgt 120 Query: 239 aacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagctacaacaag 298 || ||| | ||||| ||||| ||||| ||||| | ||||| || ||||||||||||||| Sbjct: 121 aatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagctacaacaag 180 Query: 299 atcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcccgag 358 |||||||| ||||||||||| || || ||||||||||| || || |||||||| || ||| Sbjct: 181 atcctcaaagatctcaagaaagagttttgctgcaatggtactgttgtccaggacccagag 240 Query: 359 ctaggccaggtcattcagcttcagggtgatcag 391 || |||||||||||||| ||||||||||||||| Sbjct: 241 cttggccaggtcattcaacttcagggtgatcag 273
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 163 bits (82), Expect = 9e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 212 tatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||| || |||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 33645070 tatgtacacgtgcgcattcagcagcgcaacggaagaaagagtctgactactgttcagggc 33645011 Query: 272 ctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgc 331 | |||||||||| ||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 33645010 ttgaagaaagagtacagttacaacaaaatcctcaaggatctgaaaaaggaattctgttgt 33644951 Query: 332 aatggcacagtagtccaggatcccgagctaggccaggt 369 ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 33644950 aatggtactgtagtccaagatccagagttaggccaggt 33644913 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccagg 422 ||||||||||| ||||| |||||||||||||| |||||||| || |||||||| |||| Sbjct: 33644825 caggtcattcaacttcaaggtgatcagcgtaaaaatgttgcgacgttcctagttcagg 33644768 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 102 ctcaacaaccaagtttcatgtctgatctcgacgt 135 |||||| | ||| ||||||||||||||||||||| Sbjct: 33645489 ctcaactagcaaatttcatgtctgatctcgacgt 33645456
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 163 bits (82), Expect = 9e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 212 tatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||| || |||||||| |||||||||||||| || |||||||||||||||||||||||| Sbjct: 59942 tatgtacacgtgcgcattcagcagcgcaacggaagaaagagtctgactactgttcagggc 59883 Query: 272 ctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgc 331 | |||||||||| ||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 59882 ttgaagaaagagtacagttacaacaaaatcctcaaggatctgaaaaaggaattctgttgt 59823 Query: 332 aatggcacagtagtccaggatcccgagctaggccaggt 369 ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 59822 aatggtactgtagtccaagatccagagttaggccaggt 59785 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccagg 422 ||||||||||| ||||| |||||||||||||| |||||||| || |||||||| |||| Sbjct: 59697 caggtcattcaacttcaaggtgatcagcgtaaaaatgttgcgacgttcctagttcagg 59640 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 102 ctcaacaaccaagtttcatgtctgatctcgacgt 135 |||||| | ||| ||||||||||||||||||||| Sbjct: 60361 ctcaactagcaaatttcatgtctgatctcgacgt 60328
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 155 bits (78), Expect = 2e-34 Identities = 174/206 (84%) Strand = Plus / Plus Query: 245 aggaagagtctgactactgttcagggcctaaagaaagagttcagctacaacaagatcctc 304 ||||| || ||||| ||||| ||||| | |||||||| |||||||| |||||||| || Sbjct: 893 aggaaaagcctgacaactgtgcaggggttgaagaaagaattcagctataacaagatactg 952 Query: 305 aaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggc 364 |||||||||||||| ||||||||||||||||| || || ||||||||||| || |||||| Sbjct: 953 aaggatctcaagaaagaattctgctgcaatggtactgttgtccaggatcctgaactaggc 1012 Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggct 424 ||||| ||||| ||||||||||| ||| | ||||| ||| |||| || || ||||||||| Sbjct: 1013 caggttattcaacttcagggtgaccagaggaagaacgtttctacctttcttgtccaggct 1072 Query: 425 gggattgcgaagaaggagctcatcaa 450 || || | |||||| |||| |||||| Sbjct: 1073 ggaatcgtgaagaaagagcacatcaa 1098 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 110 ccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgag 169 |||||||||||||||||||||||||| |||| | || || ||||| ||||||||| Sbjct: 764 ccaagtttcatgtctgatctcgacgtccaaattcctaccgcttttgatccctttgctgag 823 Query: 170 gcaaatgctga 180 ||||||||||| Sbjct: 824 gcaaatgctga 834
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 141 bits (71), Expect = 3e-30 Identities = 205/250 (82%), Gaps = 6/250 (2%) Strand = Plus / Plus Query: 141 ttccatctgccttcgatccttttgctgaggcaaatgctgaggatgctggtgcaggccccg 200 ||||| |||| |||||||| || |||||||||||||||||||| ||||||| || | Sbjct: 161 ttccaactgctttcgatcccttcgctgaggcaaatgctgaggactctggtgctgggac-- 218 Query: 201 gcgcaaaagattatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgacta 260 |||||||||||| |||||||| | |||||||| || || ||||| || ||||||| Sbjct: 219 ----aaaagattatgttcatgtgcgtgtacagcagcgtaatggaaggaaaagcctgacta 274 Query: 261 ctgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaagg 320 ||||||| || | ||||| || | |||||||||||||| || ||||| |||||||| | Sbjct: 275 ctgttcaaggattgaagaaggactatagctacaacaagatacttaaggacctcaagaaag 334 Query: 321 aattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattcagcttc 380 | |||||||||||||| || || ||||||||||| ||| |||| ||||||||||| || | Sbjct: 335 agttctgctgcaatggaactgttgtccaggatcctgagttagggcaggtcattcaactac 394 Query: 381 agggtgatca 390 |||||||||| Sbjct: 395 agggtgatca 404
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 139 bits (70), Expect = 1e-29 Identities = 172/206 (83%) Strand = Plus / Plus Query: 245 aggaagagtctgactactgttcagggcctaaagaaagagttcagctacaacaagatcctc 304 ||||| || ||||| ||||| ||||| | |||||||| || ||||| |||||||| || Sbjct: 266 aggaaaagcctgacaactgtgcaggggttgaagaaagaatttagctataacaagatactg 325 Query: 305 aaggatctcaagaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggc 364 |||||||||||||| || |||||||||||||| || || || |||||||| || |||||| Sbjct: 326 aaggatctcaagaaagagttctgctgcaatggtactgtcgttcaggatcctgaactaggc 385 Query: 365 caggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggct 424 ||||| ||||| ||||||| ||| ||||| ||||| ||| |||| || || ||||||||| Sbjct: 386 caggttattcaacttcaggatgaccagcggaagaacgtttctacatttcttgtccaggct 445 Query: 425 gggattgcgaagaaggagctcatcaa 450 || |||| |||||| |||| |||||| Sbjct: 446 ggaattgtgaagaaagagcacatcaa 471 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 155 gatccttttgctgaggcaaatgctga 180 ||||| |||||||||||||||||||| Sbjct: 182 gatccgtttgctgaggcaaatgctga 207 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgac 133 |||||||||||||||||||||| Sbjct: 139 aagtttcatgtctgatctcgac 160
>emb|AJ309088.1|PPI309088 Pinus pinaster partial mRNA for putative translation factor Length = 635 Score = 139 bits (70), Expect = 1e-29 Identities = 270/337 (80%), Gaps = 6/337 (1%) Strand = Plus / Plus Query: 105 aacaaccaagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttg 164 ||||| |||| |||||||| ||||| |||||| | |||| ||||| |||||||||| Sbjct: 181 aacaaacaaggttcatgtcagatctagacgttcagattccgggtgcctatgatccttttg 240 Query: 165 ctgaggcaaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgc 224 |||| ||||||||||| ||| | ||||| ||| | ||||| ||||||||||||| Sbjct: 241 ctgatgcaaatgctgaagattcaggtgc------cggatctaaagaatatgtgcatgtgc 294 Query: 225 gcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagt 284 |||| |||||||||||||| || ||||||||||| ||||| || || ||| ||| || | Sbjct: 295 gcatacagcagcgcaacggtagaaagagtctgacaactgtgcaaggtttaaggaaggaat 354 Query: 285 tcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtag 344 | ||||||||||| || ||||| || ||||| || ||||| || || ||||| || || | Sbjct: 355 ttagctacaacaaaattctcaaagacctcaaaaaagaattttgttgtaatgggactgttg 414 Query: 345 tccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttg 404 | |||||||| || || || ||||| |||||||| ||||||||||| ||||| |||||| Sbjct: 415 tgcaggatcctgaacttgggcaggtgattcagctacagggtgatcaacgtaaaaatgttt 474 Query: 405 ctactttcctagtccaggctgggattgcgaagaagga 441 | | |||||| || |||||||| |||| ||| ||||| Sbjct: 475 caaatttccttgtacaggctggaattgtgaaaaagga 511
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 123 bits (62), Expect = 8e-25 Identities = 185/226 (81%) Strand = Plus / Plus Query: 204 caaaagattatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactg 263 |||| |||||||||||| | || ||||| || || || || ||||| || |||||||||| Sbjct: 214 caaaggattatgtgcatatccgtatccaacaacgtaatggtaggaaaagcctgactactg 273 Query: 264 ttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaat 323 | || || | |||||||||||||| ||||| || ||||| ||||| |||||||| || | Sbjct: 274 tgcaagggttgaagaaagagttcagttacaataaaatcctgaaggacctcaagaaagagt 333 Query: 324 tctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattcagcttcagg 383 | ||||||||||| || || ||||| || || || ||||||||||||||||| || || | Sbjct: 334 tttgctgcaatggtactgttgtccaagacccagaactaggccaggtcattcaactccaag 393 Query: 384 gtgatcagcgtaagaatgttgctactttcctagtccaggctgggat 429 | |||||||||||||||||| | | ||||| || ||||||||||| Sbjct: 394 gggatcagcgtaagaatgtttcaagcttccttgttcaggctgggat 439
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 129/152 (84%) Strand = Plus / Minus Query: 218 catgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaag 277 ||||| |||||||||||||| || ||| | ||||| ||||| ||||| ||||| | ||| Sbjct: 20680328 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattgaag 20680269 Query: 278 aaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggc 337 || || ||||||||||||||||||||||| ||||||||||| || || ||||||||||| Sbjct: 20680268 aaggaattcagctacaacaagatcctcaaagatctcaagaaagagttttgctgcaatggt 20680209 Query: 338 acagtagtccaggatcccgagctaggccaggt 369 || || |||||||| || ||||| |||||||| Sbjct: 20680208 actgttgtccaggacccagagcttggccaggt 20680177 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 aagtttcatgtctgatctcgac 133 |||||||||||||||||||||| Sbjct: 20680519 aagtttcatgtctgatctcgac 20680498 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 366 aggtcattcagcttcagggtgatcag 391 |||||||||| ||||||||||||||| Sbjct: 20680089 aggtcattcaacttcagggtgatcag 20680064 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgtt 403 ||||||||||| |||| |||||||| ||||| |||||| Sbjct: 10476256 aggtcattcagattcaaggtgatcaacgtaaaaatgtt 10476293
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 119 bits (60), Expect = 1e-23 Identities = 129/152 (84%) Strand = Plus / Minus Query: 218 catgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaag 277 ||||| |||||||||||||| || ||| | ||||| ||||| ||||| ||||| | ||| Sbjct: 33078 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattgaag 33019 Query: 278 aaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggc 337 || || ||||||||||||||||||||||| ||||||||||| || || ||||||||||| Sbjct: 33018 aaggaattcagctacaacaagatcctcaaagatctcaagaaagagttttgctgcaatggt 32959 Query: 338 acagtagtccaggatcccgagctaggccaggt 369 || || |||||||| || ||||| |||||||| Sbjct: 32958 actgttgtccaggacccagagcttggccaggt 32927 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 aagtttcatgtctgatctcgac 133 |||||||||||||||||||||| Sbjct: 33269 aagtttcatgtctgatctcgac 33248 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 366 aggtcattcagcttcagggtgatcag 391 |||||||||| ||||||||||||||| Sbjct: 32839 aggtcattcaacttcagggtgatcag 32814
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 115 bits (58), Expect = 2e-22 Identities = 181/222 (81%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 137 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 196 Query: 172 aaatgctgaggatgctggtgcaggccccggcgcaaaagattatgtgcatgtgcgcatcca 231 ||||||| || ||||||| | | || |||| || || || ||||| |||||||| Sbjct: 197 caatgctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatcca 256 Query: 232 gcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagcta 291 |||||| || ||| | ||||| ||||| ||||| ||||| | ||||| || |||||||| Sbjct: 257 gcagcgtaatggccgtaagagcctgaccactgtccagggattgaagaaggaattcagcta 316 Query: 292 caacaagatcctcaaggatctcaagaaggaattctgctgcaa 333 |||||||||||| || ||||||||||| || || |||||||| Sbjct: 317 caacaagatccttaaagatctcaagaaagagttttgctgcaa 358
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 218 catgtgcgcatccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaag 277 ||||| |||||||||||||| || ||| | ||||| ||||| ||||| ||||| | ||| Sbjct: 2384 catgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattgaag 2443 Query: 278 aaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggc 337 || || |||||||||||||||||||| || ||||||||||| || || ||||||||||| Sbjct: 2444 aaggaattcagctacaacaagatccttaaagatctcaagaaagagttttgctgcaatggt 2503 Query: 338 acagtagtccaggatcccgagctaggccaggt 369 || || |||||||| || ||||| |||||||| Sbjct: 2504 actgttgtccaggacccagagcttggccaggt 2535 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcag 391 |||||||||| ||||||||||||||| Sbjct: 2623 aggtcattcaacttcagggtgatcag 2648 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgac 133 |||||||||||||||||||||| Sbjct: 2193 aagtttcatgtctgatctcgac 2214
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 103 bits (52), Expect = 7e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 275 aagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaat 334 |||||||| ||||||||||| || || || ||||| || ||||| || || ||||||||| Sbjct: 320 aagaaagaattcagctacaataaaatactaaaggaccttaagaaagagttttgctgcaat 379 Query: 335 ggcacagtagtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgt 394 || || || ||||||||||| || ||||||||||| ||||| || |||||||||||| | Sbjct: 380 ggtactgttgtccaggatccagaactaggccaggttattcaactccagggtgatcagaga 439 Query: 395 aagaatgttgctactttcctagtccaggctgg 426 ||||| ||| |||| || || ||||||||||| Sbjct: 440 aagaacgtttctacatttcttgtccaggctgg 471 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| | |||| |||| || ||||| ||||||||||| Sbjct: 163 aagtttcatgtctgatctcgacctccaagttcccgctgcttttgatccctttgctgaggc 222 Query: 172 aaatgctga 180 ||||||||| Sbjct: 223 aaatgctga 231
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 101 bits (51), Expect = 3e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| ||||| ||||| || |||||||||| ||||| | |||||| || || || || | Sbjct: 375 tgacaactgtccaggggcttaagaaagagtatagctatagcaagatacttaaagacctta 434 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| |||||||||||||||||||| || |||||||| | || |||| ||||| |||| Sbjct: 435 agaaagaattctgctgcaatggcaccgtcgtccaggactctgaattaggacaggttattc 494 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| ||||||||| | ||||| || |||| ||||| || ||||||||| ||| || Sbjct: 495 agcttcaaggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtga 554 Query: 435 agaagga 441 ||||||| Sbjct: 555 agaagga 561 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 ||||||| ||||| || ||||| |||||||||||||| Sbjct: 273 ctgcctttgatccgttcgctgatgcaaatgctgagga 309
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 101 bits (51), Expect = 3e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| ||||| ||||| || |||||||||| ||||| | |||||| || || || || | Sbjct: 131 tgacaactgtccaggggcttaagaaagagtatagctatagcaagatacttaaagacctta 190 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| |||||||||||||||||||| || |||||||| | || |||| ||||| |||| Sbjct: 191 agaaagaattctgctgcaatggcaccgtcgtccaggactctgaattaggacaggttattc 250 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| ||||||||| | ||||| || |||| ||||| || ||||||||| ||| || Sbjct: 251 agcttcaaggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtga 310 Query: 435 agaagga 441 ||||||| Sbjct: 311 agaagga 317 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 ||||||| ||||| || ||||| |||||||||||||| Sbjct: 29 ctgcctttgatccgttcgctgatgcaaatgctgagga 65
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 101 bits (51), Expect = 3e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| ||||| ||||| || |||||||||| ||||| | |||||| || || || || | Sbjct: 313 tgacaactgtccaggggcttaagaaagagtatagctatagcaagatacttaaagacctta 372 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| |||||||||||||||||||| || |||||||| | || |||| ||||| |||| Sbjct: 373 agaaagaattctgctgcaatggcaccgtcgtccaggactctgaattaggacaggttattc 432 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| ||||||||| | ||||| || |||| ||||| || ||||||||| ||| || Sbjct: 433 agcttcaaggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtga 492 Query: 435 agaagga 441 ||||||| Sbjct: 493 agaagga 499 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 ||||||| ||||| || ||||| |||||||||||||| Sbjct: 211 ctgcctttgatccgttcgctgatgcaaatgctgagga 247
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 101 bits (51), Expect = 3e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| ||||| ||||| || |||||||||| ||||| | |||||| || || || || | Sbjct: 312 tgacaactgtccaggggcttaagaaagagtatagctatagcaagatacttaaagacctta 371 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| |||||||||||||||||||| || |||||||| | || |||| ||||| |||| Sbjct: 372 agaaagaattctgctgcaatggcaccgtcgtccaggactctgaattaggacaggttattc 431 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| ||||||||| | ||||| || |||| ||||| || ||||||||| ||| || Sbjct: 432 agcttcaaggtgatcagaggaagaacgtatctacgttccttgttcaggctgggcttgtga 491 Query: 435 agaagga 441 ||||||| Sbjct: 492 agaagga 498 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 ||||||| ||||| || ||||| |||||||||||||| Sbjct: 210 ctgcctttgatccgttcgctgatgcaaatgctgagga 246
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || |||||||| |||||||||| || Sbjct: 250 tccagcagcgaaatggtaggaaaagcttgacaaccgtccagggcctgaagaaagagtaca 309 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||| | |||||| || ||||| |||||||| || || |||||||| ||||| || || | Sbjct: 310 gctataccaagatacttaaggacctcaagaaagagttttgctgcaacggcactgtggttc 369 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 ||||| | || || || ||||| || |||||||| ||||| || |||||||| || | | Sbjct: 370 aggattcagaactcggacaggttatacagcttcaaggtgaccaacgtaagaacgtctcca 429 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatccacggcttctaag 467 | ||||| ||||||||||| | | ||||||||| |||||||||||| || ||||||| Sbjct: 430 cattccttgtccaggctggtttggtgaagaaggataacatcaagatccatggtttctaag 489 Query: 468 c 468 | Sbjct: 490 c 490
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 281 gagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcaca 340 |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 2841041 gagttcagttacaacaagatcctcaatgatctgaaaaaggaattctgctgcaatggtact 2840982 Query: 341 gtagtccaggatcccgagctaggccaggt 369 ||| |||| ||||| ||||| |||||||| Sbjct: 2840981 gtactccaagatccagagcttggccaggt 2840953 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatg 401 |||||||||||||||| ||||||||| ||||||||| Sbjct: 2840875 aggtcattcagcttcatggtgatcagtgtaagaatg 2840840
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 281 gagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcaca 340 |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| || Sbjct: 109269 gagttcagttacaacaagatcctcaatgatctgaaaaaggaattctgctgcaatggtact 109210 Query: 341 gtagtccaggatcccgagctaggccaggt 369 ||| |||| ||||| ||||| |||||||| Sbjct: 109209 gtactccaagatccagagcttggccaggt 109181 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatg 401 |||||||||||||||| ||||||||| ||||||||| Sbjct: 109103 aggtcattcagcttcatggtgatcagtgtaagaatg 109068
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 93.7 bits (47), Expect = 7e-16 Identities = 191/239 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || |||||||| |||||||||| || Sbjct: 104 tccagcagcgaaatggtaggaaaagcttgacaaccgtccagggcctgaagaaagagtaca 163 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||| | |||||| || ||||| |||||||| || || |||||||| ||||| || || | Sbjct: 164 gctataccaagatacttaaggacctcaagaaagagttttgctgcaacggcactgtggttc 223 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 ||||| | || || || ||||| || |||||||| ||||| || |||||||| || | | Sbjct: 224 aggattcagaactcggacaggttatacagcttcaaggtgaccaacgtaagaacgtctcca 283 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatccacggcttctaa 466 | ||||| ||||||||||| | | ||||||||| |||||||||||| || |||||| Sbjct: 284 cattccttgtccaggctggtttggtgaagaaggataacatcaagatccatggtttctaa 342
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 89.7 bits (45), Expect = 1e-14 Identities = 183/229 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || ||||| || |||||||||| || Sbjct: 354 tccagcagcggaatggtaggaaaagcttgacaacggtccaggggctgaagaaagagtaca 413 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||||| |||||| || ||||| |||||||| ||||| |||||||| || || || || | Sbjct: 414 gctacaccaagatacttaaggacctcaagaaagaattttgctgcaacggaactgtggttc 473 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 | || | || || || ||||| ||||||||||| || |||||| | ||||| || | | Sbjct: 474 aagactcagaactcggacaggttattcagcttcaaggcgatcagaggaagaacgtctcca 533 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatcca 456 | |||||||||||||||||| ||| |||||| || |||||||||||| Sbjct: 534 cgttcctagtccaggctgggcttgtgaagaaagataacatcaagatcca 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 279 ctgccttcgacccgtttgctgatgcgaatgctgagga 315
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 89.7 bits (45), Expect = 1e-14 Identities = 183/229 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || ||||| || |||||||||| || Sbjct: 104 tccagcagcggaatggtaggaaaagcttgacaacggtccaggggctgaagaaagagtaca 163 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||||| |||||| || ||||| |||||||| ||||| |||||||| || || || || | Sbjct: 164 gctacaccaagatacttaaggacctcaagaaagaattttgctgcaacggaactgtggttc 223 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 | || | || || || ||||| ||||||||||| || |||||| | ||||| || | | Sbjct: 224 aagactcagaactcggacaggttattcagcttcaaggcgatcagaggaagaacgtctcca 283 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatcca 456 | |||||||||||||||||| ||| |||||| || |||||||||||| Sbjct: 284 cgttcctagtccaggctgggcttgtgaagaaagataacatcaagatcca 332 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 29 ctgccttcgacccgtttgctgatgcgaatgctgagga 65
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 89.7 bits (45), Expect = 1e-14 Identities = 183/229 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || ||||| || |||||||||| || Sbjct: 306 tccagcagcggaatggtaggaaaagcttgacaacggtccaggggctgaagaaagagtaca 365 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||||| |||||| || ||||| |||||||| ||||| |||||||| || || || || | Sbjct: 366 gctacaccaagatacttaaggacctcaagaaagaattttgctgcaacggaactgtggttc 425 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 | || | || || || ||||| ||||||||||| || |||||| | ||||| || | | Sbjct: 426 aagactcagaactcggacaggttattcagcttcaaggcgatcagaggaagaacgtctcca 485 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatcca 456 | |||||||||||||||||| ||| |||||| || |||||||||||| Sbjct: 486 cgttcctagtccaggctgggcttgtgaagaaagataacatcaagatcca 534 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 231 ctgccttcgacccgtttgctgatgcgaatgctgagga 267
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 89.7 bits (45), Expect = 1e-14 Identities = 183/229 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || ||||| || |||||||||| || Sbjct: 283 tccagcagcggaatggtaggaaaagcttgacaacggtccaggggctgaagaaagagtaca 342 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||||| |||||| || ||||| |||||||| ||||| |||||||| || || || || | Sbjct: 343 gctacaccaagatacttaaggacctcaagaaagaattttgctgcaacggaactgtggttc 402 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 | || | || || || ||||| ||||||||||| || |||||| | ||||| || | | Sbjct: 403 aagactcagaactcggacaggttattcagcttcaaggcgatcagaggaagaacgtctcca 462 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatcca 456 | |||||||||||||||||| ||| |||||| || |||||||||||| Sbjct: 463 cgttcctagtccaggctgggcttgtgaagaaagataacatcaagatcca 511 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 208 ctgccttcgacccgtttgctgatgcgaatgctgagga 244
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 89.7 bits (45), Expect = 1e-14 Identities = 183/229 (79%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 |||||||||| || || ||||| || |||| || || ||||| || |||||||||| || Sbjct: 354 tccagcagcggaatggtaggaaaagcttgacaacggtccaggggctgaagaaagagtaca 413 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||||| |||||| || ||||| |||||||| ||||| |||||||| || || || || | Sbjct: 414 gctacaccaagatacttaaggacctcaagaaagaattttgctgcaacggaactgtggttc 473 Query: 348 aggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgcta 407 | || | || || || ||||| ||||||||||| || |||||| | ||||| || | | Sbjct: 474 aagactcagaactcggacaggttattcagcttcaaggcgatcagaggaagaacgtctcca 533 Query: 408 ctttcctagtccaggctgggattgcgaagaaggagctcatcaagatcca 456 | |||||||||||||||||| ||| |||||| || |||||||||||| Sbjct: 534 cgttcctagtccaggctgggcttgtgaagaaagataacatcaagatcca 582 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 279 ctgccttcgacccgtttgctgatgcgaatgctgagga 315
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 85.7 bits (43), Expect = 2e-13 Identities = 154/191 (80%) Strand = Plus / Plus Query: 266 cagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattc 325 ||||| || |||||||||| |||||||| |||||| || ||||| |||||||| ||||| Sbjct: 322 caggggctgaagaaagagtacagctacaccaagatacttaaggacctcaagaaagaattt 381 Query: 326 tgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattcagcttcagggt 385 |||||||| || || || || || || | || || || ||||| ||||||||||| || Sbjct: 382 tgctgcaacggaactgtggttcaagactcagaactcggacaggttattcagcttcaaggc 441 Query: 386 gatcagcgtaagaatgttgctactttcctagtccaggctgggattgcgaagaaggagctc 445 |||||| | ||||| || | || |||||||||||||||||| ||| |||||| || | Sbjct: 442 gatcagaggaagaacgtctccacgttcctagtccaggctgggcttgtgaagaaagataac 501 Query: 446 atcaagatcca 456 ||||||||||| Sbjct: 502 atcaagatcca 512 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 209 ctgccttcgacccgtttgctgatgcgaatgctgagga 245
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 79.8 bits (40), Expect = 1e-11 Identities = 103/124 (83%) Strand = Plus / Plus Query: 228 tccagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttca 287 ||||||||||||| || ||||| || |||| ||||| || || || ||||| ||||||| Sbjct: 129 tccagcagcgcaatggtaggaaaagcttgaccactgtgcaaggtctgaagaaggagttca 188 Query: 288 gctacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtcc 347 |||| |||||||| |||||||| || ||||| |||| ||||||||||| || ||||| | Sbjct: 189 gctataacaagatactcaaggacctgaagaaacaattttgctgcaatggaactgtagttc 248 Query: 348 agga 351 |||| Sbjct: 249 agga 252
>emb|AJ519840.1|CAR519840 Coffea arabica sui1 gene, exons 1-5 Length = 2677 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 204 caaaagattatgtgcatgtgcgcatccagcagcgcaacggcaggaagagtctgactactg 263 |||| |||||||||||| | || ||||| || || || || ||||| || |||||||||| Sbjct: 1961 caaaggattatgtgcatatccgtatccaacaacgtaatggtaggaaaagcctgactactg 2020 Query: 264 ttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaat 323 | || || | || ||||||||||| ||||| || ||||| ||||| |||||||| || | Sbjct: 2021 tgcaagggttgaacaaagagttcagttacaataaaatcctgaaggacctcaagaaagagt 2080 Query: 324 tctgctgcaatggcacagtagtccaggatcccgagctaggccaggtc 370 | ||||||||||| || || ||||| || || || |||||||||||| Sbjct: 2081 tttgctgcaatggtactgttgtccaagacccagaactaggccaggtc 2127 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgtt 403 |||||||||| || || || |||||||||||||||||| Sbjct: 2209 aggtcattcaactccaaggggatcagcgtaagaatgtt 2246
>gb|DQ083225.1| Oryza sativa (indica cultivar-group) clone 5B11G73 mRNA sequence Length = 268 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 112 aagtttcatgtctgatctcgacgttacgcttccatctgccttcgatccttttgctgaggc 171 |||||||||||||||||||||| || | | ||| ||||||||||||| ||||||||||| Sbjct: 158 aagtttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggc 217 Query: 172 aaatgctg 179 ||||||| Sbjct: 218 caatgctg 225
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 71.9 bits (36), Expect = 2e-09 Identities = 168/212 (79%) Strand = Plus / Plus Query: 230 cagcagcgcaacggcaggaagagtctgactactgttcagggcctaaagaaagagttcagc 289 |||||||| || || ||||| || |||| ||||| ||||| || |||||||||| |||| Sbjct: 133 cagcagcgtaatggtaggaaaagcttgacaactgtccaggggctgaagaaagagtacagc 192 Query: 290 tacaacaagatcctcaaggatctcaagaaggaattctgctgcaatggcacagtagtccag 349 |||| |||||| || |||||||||||||| || || || ||||| || || || || || Sbjct: 193 tacaccaagatacttaaggatctcaagaaagagttttgttgcaacggaactgtcgttcaa 252 Query: 350 gatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgttgctact 409 || | || || || ||||| ||||||||||| || || ||| | ||||| || | || Sbjct: 253 gactctgaacttggacaggttattcagcttcaaggcgaccagaggaagaacgtctccacg 312 Query: 410 ttcctagtccaggctgggattgcgaagaagga 441 ||||| |||||||||||| ||| ||||||||| Sbjct: 313 ttccttgtccaggctgggcttgtgaagaagga 344 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 147 ctgccttcgatccttttgctgaggcaaatgctgagga 183 |||||||||| || |||||||| || ||||||||||| Sbjct: 56 ctgccttcgacccgtttgctgatgcgaatgctgagga 92
>gb|DQ083223.1| Oryza sativa (indica cultivar-group) clone 5B12A69 mRNA sequence Length = 209 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 344 gtccaggatcccgagctaggccaggtcattcagcttcagggtgatcagcgtaagaatgtt 403 |||||||| || ||||| |||||||||||||| ||||||||||||||| | ||||| || Sbjct: 7 gtccaggacccagagcttggccaggtcattcaacttcagggtgatcagaggaagaacgta 66 Query: 404 gctactttcctagtccaggctgggattgcgaagaaggagctcatcaagat 453 | | ||| || || ||||| || |||| ||||||||| | ||||||||| Sbjct: 67 tcaaattttcttgttcaggccggcattgtgaagaaggaacacatcaagat 116
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| ||||| ||||| || |||||||||| ||||| | |||||| || || || || | Sbjct: 40610 tgacaactgtccaggggcttaagaaagagtatagctatagcaagatacttaaagacctta 40551 Query: 315 agaaggaattctgctgcaatggcacagtagtccagga 351 |||| |||||||||||||||||||| || |||||||| Sbjct: 40550 agaaagaattctgctgcaatggcaccgtcgtccagga 40514
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 155 gatccttttgctgaggcaaatgctgaggatgctggtgc 192 ||||||||||||||||||||||||||||| || ||||| Sbjct: 53484 gatccttttgctgaggcaaatgctgaggacgccggtgc 53521 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 275 aagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaattctgctgcaat 334 |||||||| ||||| ||||||||||| || || || || |||||||| || || || ||| Sbjct: 53601 aagaaagaattcagttacaacaagattctgaaagaccttaagaaggagttttgttgtaat 53660 Query: 335 ggcacagtagtccaggatcccgagctaggccaggt 369 || ||||| |||||||| || |||| ||| ||||| Sbjct: 53661 ggtacagttgtccaggacccagagcaaggacaggt 53695
>gb|AF521961.1| Helianthus annuus translation initiation factor B04 mRNA, complete cds Length = 621 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 263 gttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaaggaa 322 |||||||| || || || ||| |||||||| | || || ||||| ||||||||||| ||| Sbjct: 229 gttcagggtctgaaaaaggagctcagctacgataaaattctcaaagatctcaagaaagaa 288 Query: 323 ttctgctgcaatggcacagtagtccaggat 352 |||||||| |||||||| || || |||||| Sbjct: 289 ttctgctgtaatggcactgttgtgcaggat 318
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 128487 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 128443
>gb|AY550043.1| Sus scrofa translation factor sui1-like protein mRNA, complete cds Length = 578 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 103 atccagcaacggaacggcaggaagacactgactactgttcagggc 147
>gb|BC033505.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:36534 IMAGE:4209443), complete cds Length = 910 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 279 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 323
>gb|BC030319.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:40900 IMAGE:5372299), complete cds Length = 891 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 177 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 221
>ref|NM_026892.1| Mus musculus eukaryotic translation initiation factor 1B (Eif1b), mRNA Length = 885 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 275 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 319
>dbj|AK013965.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001N14 product:ADULT MALE CEREBELLUM CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:1500010M16:SIMILAR TO PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG, FULL INSERT SEQUENCE homolog [Mus musculus], full insert sequence Length = 849 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 281 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 325
>gb|BC109541.1| Bos taurus cDNA clone MGC:133836 IMAGE:8057925, complete cds Length = 976 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 364 atccagcaacggaacggcaggaagacactgactactgttcagggc 408
>dbj|AK005192.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500010M16 product:Protein translation factor SUI1 homolog GC20 homolog [Homo sapiens], full insert sequence Length = 885 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 275 atccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 319
>gb|AF267716.1|AF267716 Sus scrofa translation factor sui1-like protein gene, partial cds Length = 1155 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 1137 atccagcaacggaacggcaggaagacactgactactgttcagggc 1093
>ref|NM_001001635.1| Sus scrofa translation factor sui1-like protein (LOC414417), mRNA Length = 578 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 103 atccagcaacggaacggcaggaagacactgactactgttcagggc 147
>gb|AY610489.1| Sus scrofa clone rssp04_e14.y1.abd, mRNA sequence Length = 664 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 222 atccagcaacggaacggcaggaagacactgactactgttcagggc 266
>ref|NM_001037598.1| Bos taurus similar to translation factor sui1 homolog (MGC133836), mRNA Length = 976 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || ||||||||||||| |||||||||||||||||| Sbjct: 364 atccagcaacggaacggcaggaagacactgactactgttcagggc 408
>ref|NM_180861.1| Arabidopsis thaliana translation initiation factor AT5G54940 transcript variant AT5G54940.1 mRNA, complete cds Length = 617 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 298 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 357 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 358 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 417 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 418 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 477 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 478 agaaggatcagatcaagatccacggtttctaa 509
>ref|NM_124876.3| Arabidopsis thaliana translation initiation factor AT5G54940 transcript variant AT5G54940.2 mRNA, complete cds Length = 592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 232 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 291 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 292 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 351 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 352 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 411 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 412 agaaggatcagatcaagatccacggtttctaa 443
>gb|AY133677.1| Arabidopsis thaliana AT5g54940/MBG8_21 mRNA, complete cds Length = 339 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 128 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 187 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 188 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 247 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 248 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 307 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 308 agaaggatcagatcaagatccacggtttctaa 339
>gb|AF385736.1|AF385736 Arabidopsis thaliana AT5g54940/MBG8_21 mRNA, complete cds Length = 591 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 233 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 292 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 293 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 352 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 353 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 412 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 413 agaaggatcagatcaagatccacggtttctaa 444
>emb|BX833097.1|CNS0A21C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 545 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 184 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 243 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 244 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 303 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 304 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 363 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 364 agaaggatcagatcaagatccacggtttctaa 395
>emb|BX831257.1|CNS0A0P2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 184 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 243 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 244 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 303 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 304 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 363 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 364 agaaggatcagatcaagatccacggtttctaa 395
>gb|AY087132.1| Arabidopsis thaliana clone 32071 mRNA, complete sequence Length = 585 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Plus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 233 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 292 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 293 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 352 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 353 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 412 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 413 agaaggatcagatcaagatccacggtttctaa 444
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 56.0 bits (28), Expect = 1e-04 Identities = 166/212 (78%) Strand = Plus / Minus Query: 255 tgactactgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctca 314 |||| |||||||| || || |||||||||| ||||||| | | ||| ||||||||| | | Sbjct: 67634 tgacgactgttcaagggcttaagaaagagtacagctacgagaggattctcaaggatttga 67575 Query: 315 agaaggaattctgctgcaatggcacagtagtccaggatcccgagctaggccaggtcattc 374 |||| || ||||||||||| || | || || ||||| || |||||| || |||| | Sbjct: 67574 agaaagatttctgctgcaacggtaacgttgtgcaggacaaagaactaggcaagatcatcc 67515 Query: 375 agcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctgggattgcga 434 ||||||| |||||||| | ||||| || || ||| | ||||| |||||||||| | Sbjct: 67514 agcttcaaggtgatcaaaggaagaaagtgtctcagttcttggtccaaactgggattgcta 67455 Query: 435 agaaggagctcatcaagatccacggcttctaa 466 ||||||| | |||||||||||||| |||||| Sbjct: 67454 agaaggatcagatcaagatccacggtttctaa 67423
>gb|AF091857.1|AF091857 Pimpinella brachycarpa protein translation factor SUI1 homolog mRNA, complete cds Length = 533 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgttgctactttcctagtccaggctg 425 |||||||||| ||||| || |||||||| ||||| || | |||||| | |||||||||| Sbjct: 289 aggtcattcaacttcaaggcgatcagcgcaagaacgtctccactttcattgtccaggctg 348 Query: 426 ggattgcgaagaagga 441 |||||| |||||||| Sbjct: 349 ggattgtcaagaagga 364
>gb|AY617076.1| Bassia scoparia putative translation initiation factor mRNA, partial cds Length = 207 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 260 actgttcagggcctaaagaaagagttcagctacaacaagatcctcaaggatctcaagaag 319 |||||||| || || ||||| || ||||||||| | ||||| ||||| || ||||| ||| Sbjct: 1 actgttcaaggtctgaagaaggatttcagctacgagaagatactcaaagacctcaaaaag 60 Query: 320 gaattctgctgcaatggca 338 || ||||||||||| |||| Sbjct: 61 gagttctgctgcaacggca 79
>gb|BC088954.1| Xenopus laevis cDNA clone MGC:85057 IMAGE:6327089, complete cds Length = 4170 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||| | ||||||||||||| ||| |||||||| |||||| Sbjct: 2942 atccagcagaggaacggcaggaagactctcactactgtacagggc 2986
>gb|DQ215825.1| Taeniopygia guttata clone 0065P0009C06 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 645 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215824.1| Taeniopygia guttata clone 0061P0020D08 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 649 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 221 atccagcagcgcaacggcaggaaga 245
>gb|DQ215823.1| Taeniopygia guttata clone 0058P0020F02 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 649 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215822.1| Taeniopygia guttata clone 0058P0015F08 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 645 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215821.1| Taeniopygia guttata clone 0058P0003H09 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 650 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215820.1| Taeniopygia guttata clone 0063P0027C07 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 645 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215819.1| Taeniopygia guttata clone 0065P0015F12 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 650 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215818.1| Taeniopygia guttata clone 0058P0009H05 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 504 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 75 atccagcagcgcaacggcaggaaga 99
>gb|DQ215817.1| Taeniopygia guttata clone 0058P0003G09 eukaryotic translation initiation factor 1 variant 3-like mRNA, complete sequence Length = 650 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 220 atccagcagcgcaacggcaggaaga 244
>gb|DQ215816.1| Taeniopygia guttata clone 0058P0060A05 eukaryotic translation initiation factor 1 variant 2-like mRNA, complete sequence Length = 1127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 185 atccagcagcgcaacggcaggaaga 209
>gb|DQ215815.1| Taeniopygia guttata clone 0061P0014G02 eukaryotic translation initiation factor 1 variant 1-like mRNA, complete sequence Length = 954 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||||||||||||||||| Sbjct: 529 atccagcagcgcaacggcaggaaga 553
>ref|XM_516381.1| PREDICTED: Pan troglodytes similar to translation factor sui1 homolog (LOC460285), mRNA Length = 599 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 360 atccagcaacggaacggcagaaagacactgactactgttcagggc 404
>gb|BC059790.1| Xenopus laevis hypothetical protein MGC68655, mRNA (cDNA clone MGC:68655 IMAGE:4032709), complete cds Length = 1007 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||| | ||||||||||||| ||| |||||||| |||||| Sbjct: 187 atccagcagaggaacggcaggaagactctcactactgtacagggc 231
>ref|NM_005875.2| Homo sapiens eukaryotic translation initiation factor 1B (EIF1B), mRNA Length = 1014 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 363 atccagcaacggaacggcagaaagacactgactactgttcagggc 407
>gb|BC006996.1| Homo sapiens eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:12271 IMAGE:4044439), complete cds Length = 1023 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 347 atccagcaacggaacggcagaaagacactgactactgttcagggc 391
>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence Length = 186317 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 20511 atccagcaacggaacggcagaaagacactgactactgttcagggc 20555
>emb|CR610118.1| full-length cDNA clone CS0DI083YG09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 869 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 241 atccagcaacggaacggcagaaagacactgactactgttcagggc 285
>emb|CR601510.1| full-length cDNA clone CS0DI009YF18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 706 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 160 atccagcaacggaacggcagaaagacactgactactgttcagggc 204
>emb|CR600400.1| full-length cDNA clone CS0DN002YE04 of Adult brain of Homo sapiens (human) Length = 790 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 162 atccagcaacggaacggcagaaagacactgactactgttcagggc 206
>emb|CR542223.1| Homo sapiens full open reading frame cDNA clone RZPDo834C1025D for gene GC20, translation factor sui1 homolog; complete cds, without stopcodon Length = 339 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 103 atccagcaacggaacggcagaaagacactgactactgttcagggc 147
>dbj|AB169765.1| Macaca fascicularis brain cDNA, clone: QtrA-11743, similar to human translation factor sui1 homolog (GC20), mRNA, RefSeq: NM_005875.1 Length = 1019 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 363 atccagcaacggaacggcagaaagacactgactactgttcagggc 407
>dbj|AK223448.1| Homo sapiens mRNA for translation factor sui1 homolog, clone: FCC113D06 Length = 929 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 358 atccagcaacggaacggcagaaagacactgactactgttcagggc 402
>ref|XM_217294.3| PREDICTED: Rattus norvegicus similar to translation factor sui1 homolog (predicted) (LOC301068), mRNA Length = 1005 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||||| ||||||||||||| ||||| ||||| |||||| Sbjct: 377 atccagcagcggaacggcaggaagacgctgaccactgtgcagggc 421
>gb|AF263452.1|AF263452 Homo sapiens translational factor eIF-1 mRNA, complete cds Length = 945 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 336 atccagcaacggaacggcagaaagacactgactactgttcagggc 380
>gb|AF077052.1| Homo sapiens protein translation factor sui1 homolog mRNA, complete cds Length = 992 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 344 atccagcaacggaacggcagaaagacactgactactgttcagggc 388
>gb|AY894036.1| Synthetic construct Homo sapiens clone FLH131152.01L translation factor sui1-like (GC20) mRNA, partial cds Length = 342 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| |||||||||||||||||| Sbjct: 103 atccagcaacggaacggcagaaagacactgactactgttcagggc 147
>gb|M96818.1|EUPTBPA Euplotes crassus macronuclear 51 kDa telomere-binding protein gene, complete cds Length = 1634 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 296 aagatcctcaaggatctcaagaag 319 |||||||||||||||||||||||| Sbjct: 676 aagatcctcaaggatctcaagaag 699
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgttg 404 |||||||||||||| | || |||||| |||||||||||| Sbjct: 111839 aggtcattcagctttaaggcgatcagtgtaagaatgttg 111877 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 208 agattatgtgcatgtgcgcatccagca 234 |||||||||||||||| |||||||||| Sbjct: 111620 agattatgtgcatgtgtgcatccagca 111646
>ref|XM_421398.1| PREDICTED: Gallus gallus similar to mKIAA0284 protein (LOC423494), mRNA Length = 6033 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 ggtcattcagcttcagggtgat 388 |||||||||||||||||||||| Sbjct: 1408 ggtcattcagcttcagggtgat 1387
>gb|BT009033.1| Triticum aestivum clone wdk4c.pk005.f24:fis, full insert mRNA sequence Length = 3257 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 tcctcaaggatctcaagaagga 321 |||||||||||||||||||||| Sbjct: 541 tcctcaaggatctcaagaagga 562
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgtt 403 ||||||||||| |||| |||||||| ||||| |||||| Sbjct: 27585 aggtcattcagattcaaggtgatcaacgtaaaaatgtt 27622
>dbj|AK101048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009H10, full insert sequence Length = 2452 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcgtaagaatgtt 403 ||||||||||| |||| |||||||| ||||| |||||| Sbjct: 2343 aggtcattcagattcaaggtgatcaacgtaaaaatgtt 2380
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ttgctgaggcaaatgctgagg 182 ||||||||||||||||||||| Sbjct: 38737 ttgctgaggcaaatgctgagg 38757
>ref|XM_418159.1| PREDICTED: Gallus gallus similar to Eukaryotic translation initiation factor 1 (eIF1) (Protein translation factor SUI1 homolog) (Sui1iso1) (LOC420037), mRNA Length = 1823 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||| ||||||||||||| Sbjct: 859 atccagcagcggaacggcaggaaga 883
>ref|XM_534229.2| PREDICTED: Canis familiaris similar to translation factor sui1 homolog (LOC477030), mRNA Length = 1027 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||||| |||| ||||||||||| |||||| Sbjct: 375 atccagcaacggaacggcagaaagacactgactactgtccagggc 419
>emb|AL606828.4| Human DNA sequence from clone RP11-20J6 on chromosome 6, complete sequence Length = 33887 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 590 ttgtgttgtcacctgattattatgc 614 ||||||||| ||||||||||||||| Sbjct: 19949 ttgtgttgttacctgattattatgc 19973
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 593 tgttgtcacctgattattatgctgc 617 |||||||||||||||||| |||||| Sbjct: 44612 tgttgtcacctgattattctgctgc 44636
>gb|DQ363457.1| Ictalurus punctatus clone C139CH01 translation factor sui1-like mRNA, complete cds Length = 685 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 ||||||||| | ||||||||||||| |||||| || || |||||| Sbjct: 211 atccagcagaggaacggcaggaagactctgaccacagtgcagggc 255
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ttgctgaggcaaatgctgagg 182 ||||||||||||||||||||| Sbjct: 28079604 ttgctgaggcaaatgctgagg 28079624 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ttgctgaggcaaatgctgag 181 |||||||||||||||||||| Sbjct: 21437476 ttgctgaggcaaatgctgag 21437457
>emb|BX537270.4| Zebrafish DNA sequence from clone DKEY-278E24 in linkage group 4, complete sequence Length = 175518 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gtgcgctccaccagcaaagct 46 ||||||||||||||||||||| Sbjct: 104455 gtgcgctccaccagcaaagct 104435
>emb|BX510652.6| Zebrafish DNA sequence from clone CH211-107N23 in linkage group 4, complete sequence Length = 165746 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 gtgcgctccaccagcaaagct 46 ||||||||||||||||||||| Sbjct: 48551 gtgcgctccaccagcaaagct 48531
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 ttgctgaggcaaatgctgagg 182 ||||||||||||||||||||| Sbjct: 28064482 ttgctgaggcaaatgctgagg 28064502 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ttgctgaggcaaatgctgag 181 |||||||||||||||||||| Sbjct: 21747675 ttgctgaggcaaatgctgag 21747656
>gb|AF064607.1|AF064607 Homo sapiens GC20 protein mRNA, complete cds Length = 812 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaagagtctgactactgttcagggc 271 |||||||| || |||||| | |||| |||||||||||||||||| Sbjct: 173 atccagcaacggaacggcggaaagacactgactactgttcagggc 217
>gb|U25125.1|GGU25125 Gallus gallus preprogastrin gene, complete cds Length = 6418 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 atccagcagcgcaacggcaggaaga 251 ||||||||||| ||||||||||||| Sbjct: 3 atccagcagcggaacggcaggaaga 27
>gb|AC005361.1| Homo sapiens chromosome 16, cosmid clone 352F10 (LANL), complete sequence Length = 35677 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 368 gtcattcagcttcagggtgatcagcgtaagaa 399 ||||||||||| |||||||| ||||| ||||| Sbjct: 16957 gtcattcagctacagggtgaccagcgcaagaa 16988
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 gcgcatccagcagcgcaacggcag 246 |||||||||||||||| ||||||| Sbjct: 2172289 gcgcatccagcagcgccacggcag 2172266
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ttgctgaggcaaatgctgag 181 |||||||||||||||||||| Sbjct: 95226 ttgctgaggcaaatgctgag 95207
>emb|AL049594.4|HSDJ860P4 Human DNA sequence from clone RP5-860P4 on chromosome 20 Contains the 3' end of the C20orf39 gene for chromosome 20 open reading frame 39, a novel gene and a CpG island, complete sequence Length = 156791 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgctgaggatgctggtgcag 194 |||||||||||||||||||| Sbjct: 124988 tgctgaggatgctggtgcag 124969
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 caaggccaccgccaccaccg 488 |||||||||||||||||||| Sbjct: 2000243 caaggccaccgccaccaccg 2000262
>gb|AC015844.12| Homo sapiens chromosome 17, clone RP11-283E7, complete sequence Length = 172478 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agaatgttgctactttccta 415 |||||||||||||||||||| Sbjct: 3065 agaatgttgctactttccta 3046
>emb|BX649555.9| Zebrafish DNA sequence from clone CH211-117C13 in linkage group 16, complete sequence Length = 163314 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 gtcacctgattattatgctg 616 |||||||||||||||||||| Sbjct: 145307 gtcacctgattattatgctg 145288
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gaaagagttcagctacaaca 296 |||||||||||||||||||| Sbjct: 2038163 gaaagagttcagctacaaca 2038144
>gb|AC099476.6| Rattus norvegicus BAC CH230-159G8 (Children's Hospital Oakland Research Institute) complete sequence Length = 208229 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 591 tgtgttgtcacctgattatt 610 |||||||||||||||||||| Sbjct: 180082 tgtgttgtcacctgattatt 180101
>gb|AC128966.4| Rattus norvegicus BAC CH230-194D11 (Children's Hospital Oakland Research Institute) complete sequence Length = 214096 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 tgtgttgtcacctgattatt 610 |||||||||||||||||||| Sbjct: 191799 tgtgttgtcacctgattatt 191780
>gb|AC093101.1| Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR06I01, complete sequence Length = 175167 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tgccagtcaaacctcaacaa 109 |||||||||||||||||||| Sbjct: 127504 tgccagtcaaacctcaacaa 127523
>emb|BX248115.12| Zebrafish DNA sequence from clone CH211-208K15 in linkage group 16, complete sequence Length = 211852 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 gtcacctgattattatgctg 616 |||||||||||||||||||| Sbjct: 56296 gtcacctgattattatgctg 56277
>gb|DQ163916.1| Bacteriophage M6, complete genome Length = 59446 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 223 gcgcatccagcagcgcaacggcaggaag 250 |||||||||| ||||||||||| ||||| Sbjct: 42074 gcgcatccaggagcgcaacggcgggaag 42101
>gb|BC041506.1| Xenopus laevis suppressor of initiator codon mutations, related sequence 1 (S. cerevisiae), mRNA (cDNA clone MGC:52987 IMAGE:4930819), complete cds Length = 977 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 366 aggtcattcagcttcagggtgatcagcg 393 |||| |||||||||||||| |||||||| Sbjct: 339 aggtgattcagcttcagggagatcagcg 366
>gb|AE003646.3| Drosophila melanogaster chromosome 2L, section 55 of 83 of the complete sequence Length = 265413 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tgccagtcaaacctcaacaa 109 |||||||||||||||||||| Sbjct: 172557 tgccagtcaaacctcaacaa 172576
>dbj|AP002500.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2240G15, complete sequences Length = 49000 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 tttgctgaggcaaatgctgaggat 184 |||||||| ||||||||||||||| Sbjct: 27398 tttgctgaagcaaatgctgaggat 27421
>gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.235_I_10, complete sequence Length = 140677 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agaatgttgctactttccta 415 |||||||||||||||||||| Sbjct: 138523 agaatgttgctactttccta 138504
>dbj|AK114444.1| Ciona intestinalis cDNA, clone:cieg002h13, full insert sequence Length = 3409 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 tccttttgctgaggcaaatg 176 |||||||||||||||||||| Sbjct: 560 tccttttgctgaggcaaatg 579
>gb|U78042.1|BTU78042 Bos taurus hormone sensitive lipase (bHSL) mRNA, partial cds Length = 429 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ccaggtcattcagcttcagg 383 |||||||||||||||||||| Sbjct: 67 ccaggtcattcagcttcagg 48 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,412,493 Number of Sequences: 3902068 Number of extensions: 5412493 Number of successful extensions: 117740 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116970 Number of HSP's gapped (non-prelim): 760 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)