Clone Name | baalm15 |
---|---|
Clone Library Name | barley_pub |
>gb|AF067732.1|AF067732 Hordeum vulgare ribosomal protein S12 (rps12) mRNA, complete cds Length = 760 Score = 1114 bits (562), Expect = 0.0 Identities = 562/562 (100%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 239 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 299 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 359 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 419 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 479 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctcaatagttgagaatg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtctcaatagttgagaatg 539 Query: 361 tttcatcatgcaaaacttgtgttgggcattttggtccttggtttaattatgcttttgttc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 tttcatcatgcaaaacttgtgttgggcattttggtccttggtttaattatgcttttgttc 599 Query: 421 ttgggcttatactgttacaagtttcaagtgtgagcctagcagatattgttgatttggaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 ttgggcttatactgttacaagtttcaagtgtgagcctagcagatattgttgatttggaca 659 Query: 481 tttgagcctttgtttatcaggcagctgctgcctttagcgtaaatcatcaagagctgataa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 tttgagcctttgtttatcaggcagctgctgcctttagcgtaaatcatcaagagctgataa 719 Query: 541 tataattctctttgcaatatta 562 |||||||||||||||||||||| Sbjct: 720 tataattctctttgcaatatta 741
>ref|XM_476648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 730 Score = 398 bits (201), Expect = e-108 Identities = 306/341 (89%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 163 actgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtctc 222 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 223 cgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgaggac 282 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || ||||| |||||||| || ||| | |||||||| || || ||||||||||| |||||| Sbjct: 283 tgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttcac 342 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| ||| Sbjct: 343 cttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattgac 402 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||| Sbjct: 403 tctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatggt 462 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 ||||| || |||||||||||||| |||||| | |||||||| Sbjct: 463 gaagagtctgagggccttaacatagtgcaggactatgtcaa 503
>dbj|AK121635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C16, full insert sequence Length = 734 Score = 398 bits (201), Expect = e-108 Identities = 306/341 (89%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 167 actgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtctc 226 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 227 cgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgaggac 286 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || ||||| |||||||| || ||| | |||||||| || || ||||||||||| |||||| Sbjct: 287 tgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttcac 346 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| ||| Sbjct: 347 cttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattgac 406 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||| Sbjct: 407 tctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatggt 466 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 ||||| || |||||||||||||| |||||| | |||||||| Sbjct: 467 gaagagtctgagggccttaacatagtgcaggactatgtcaa 507
>dbj|AK058680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A01, full insert sequence Length = 730 Score = 398 bits (201), Expect = e-108 Identities = 306/341 (89%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 163 actgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtctc 222 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 223 cgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgaggac 282 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || ||||| |||||||| || ||| | |||||||| || || ||||||||||| |||||| Sbjct: 283 tgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttcac 342 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||| ||||| || ||||||||||||||||||||||| ||| Sbjct: 343 cttgttaccgtgcctagtgctaagactcttggcgagtgggcagggctttgcaagattgac 402 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||| Sbjct: 403 tctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgttgtcaaggactatggt 462 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 ||||| || |||||||||||||| |||||| | |||||||| Sbjct: 463 gaagagtctgagggccttaacatagtgcaggactatgtcaa 503
>ref|XM_477173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 373 bits (188), Expect = e-100 Identities = 305/344 (88%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 186 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 245 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 246 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 305 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 306 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 365 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 366 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattgat 425 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||| Sbjct: 426 tctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcggt 485 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 344 ||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 486 gaagagtcagagggcctcaacatagtccaggactatgtcaagtc 529
>dbj|AK121720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080B09, full insert sequence Length = 754 Score = 373 bits (188), Expect = e-100 Identities = 305/344 (88%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 183 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 242 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 243 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 302 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 303 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 362 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 363 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattgat 422 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||| Sbjct: 423 tctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcggt 482 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 344 ||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 483 gaagagtcagagggcctcaacatagtccaggactatgtcaagtc 526
>dbj|AK059090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B10, full insert sequence Length = 751 Score = 373 bits (188), Expect = e-100 Identities = 305/344 (88%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 186 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 245 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 246 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 305 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 306 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 365 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || ||||| ||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct: 366 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcagggctttgcaagattgat 425 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||| ||| Sbjct: 426 tctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgttgtcaaggacttcggt 485 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 344 ||||| || |||||||| ||||| || ||| | ||||||||||| Sbjct: 486 gaagagtcagagggcctcaacatagtccaggactatgtcaagtc 529
>gb|BT017926.1| Zea mays clone EL01N0519G01.c mRNA sequence Length = 580 Score = 371 bits (187), Expect = 2e-99 Identities = 298/335 (88%) Strand = Plus / Plus Query: 10 cagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctccgtgaggct 69 ||||| || ||||||||||||||||||||||| || ||||||||||| |||||||||||| Sbjct: 10 cagctcgtgatgaagaagtcaagtgctcatgacggacttgtgaagggtctccgtgaggct 69 Query: 70 gccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccag 129 |||||| |||| |||||||| || ||||||||||| ||||| |||||||| ||||||||| Sbjct: 70 gccaaggccatcgagaagcacgccgctcagctttgcgtgcttgctgaggactgtgaccag 129 Query: 130 cctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttact 189 || |||||||| ||||| || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 130 ccagattacgtcaagctggtgaaggcactctgcgctgagcacaatgttcacctggtcact 189 Query: 190 gtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggc 249 || || ||||| ||||| || |||||||| |||||||||||||| ||| |||||||| Sbjct: 190 gttcctgccgctaagactcttggcgagtgggctgggctttgcaagattgactctgagggc 249 Query: 250 aaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaagaatcc 309 |||||||||||||||||||||||||| ||| | || ||||||||||| ||||||||||| Sbjct: 250 aaggcaaggaaggttgtaggctgctcctgcgtcgtcgtcaaggactacggtgaagaatct 309 Query: 310 gagggccttaacatcgtgcagcagtatgtcaagtc 344 |||||||||||||| |||||| ||||||||||||| Sbjct: 310 gagggccttaacatagtgcaggagtatgtcaagtc 344
>gb|AY104036.1| Zea mays PCO068483 mRNA sequence Length = 845 Score = 359 bits (181), Expect = 7e-96 Identities = 301/341 (88%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 ||||| || ||||| ||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 231 actgccctgcagctcgtcatgaagaagtcaggtgctcatgatggccttgtgaagggtctt 290 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||||||||| |||| ||||||||||| |||||||| || ||||| || ||||| Sbjct: 291 cgtgaggctgccaaagccatcgagaagcatgccgctcagctctgcgtgcttgccgaggac 350 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || |||||||||||||| || ||||| || ||||| || ||||||||||||||||| ||| Sbjct: 351 tgcgaccagcctgattatgtcaagctggtgaaggctctctgcgctgagcacaatgtccac 410 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 |||||||||||||| || || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 411 ctggttactgtgcctagcgccaaaactcttggagagtgggctgggctttgcaagatcgac 470 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| |||||||||||||||||||| || |||||||||||||||| || Sbjct: 471 tctgagggcaaggcgaggaaggttgtaggctgctcctgtgttgttgtcaaggactacggc 530 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 |||||||| || ||||||||||| |||||| |||| ||||| Sbjct: 531 gaagaatctgaaggccttaacatagtgcaggagtacgtcaa 571
>gb|AY109069.1| Zea mays PCO128954 mRNA sequence Length = 755 Score = 341 bits (172), Expect = 2e-90 Identities = 301/344 (87%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 ||||| || ||||| || |||||||||||||||||||||||||| ||||||||||| || Sbjct: 201 actgcgctgcagctggtgatgaagaagtcaagtgctcatgatggacttgtgaagggtctt 260 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 || |||||||||||| |||||||||||||||||||||||||||| || || |||||||| Sbjct: 261 cgcgaggctgccaaggccattgagaagcatgctgctcagctttgcgttcttgctgaggac 320 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||| ||||| || ||||| || ||||| || || ||||| |||||||||||| Sbjct: 321 tgtgaccagccagattatgtcaagctggtgaaggcgctctgtgctgaacacaatgttcac 380 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 || || ||||| || |||||| ||||| || |||||||| |||||||||||||| ||| Sbjct: 381 cttgtcactgttcctgctgctaagactcttggcgagtgggctgggctttgcaagattgac 440 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 | |||||||||||||||||||||||||||||||| || | |||||||||||||| ||| Sbjct: 441 tccgagggcaaggcaaggaaggttgtaggctgctcctgtgtcgttgtcaaggactacggt 500 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 344 |||||||| |||||||||||||| |||||| ||||||||||||| Sbjct: 501 gaagaatctgagggccttaacatagtgcaggagtatgtcaagtc 544
>gb|BT017581.1| Zea mays clone EL01N0429E05.c mRNA sequence Length = 747 Score = 335 bits (169), Expect = 9e-89 Identities = 298/341 (87%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 ||||| || ||||| ||||||||||||||| | | | ||||||||||||||||||| || Sbjct: 138 actgccctgcagctcgtcatgaagaagtcagggggtgatgatggccttgtgaagggtctt 197 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||||||||| |||| ||||||||||| |||||||| || ||||| || ||||| Sbjct: 198 cgtgaggctgccaaagccatcgagaagcatgccgctcagctctgcgtgcttgccgaggac 257 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || |||||||||||||| || ||||| || ||||| || ||||||||||||||||| ||| Sbjct: 258 tgcgaccagcctgattatgtcaagctggtgaaggctctctgcgctgagcacaatgtccac 317 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 |||||||||||||| || || |||||||| ||||||||||| |||||||||||||||||| Sbjct: 318 ctggttactgtgcctagcgccaaaactcttggagagtgggctgggctttgcaagatcgac 377 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| |||||||||||||||||||| || |||||||||||||||| || Sbjct: 378 tctgagggcaaggcgaggaaggttgtaggctgctcctgtgttgttgtcaaggactacggc 437 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 |||||||| || ||||||||||| |||||| |||| ||||| Sbjct: 438 gaagaatctgaaggccttaacatagtgcaggagtacgtcaa 478
>gb|BT018309.1| Zea mays clone EL01T0206H08.c mRNA sequence Length = 608 Score = 333 bits (168), Expect = 4e-88 Identities = 300/344 (87%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct: 151 actgctctgcagcttgtcatgaagaagtcgggtgctcatgatggccttgttaagggtctt 210 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||||||||| | |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 211 cgtgaggctgccaaagcaattgagaagcatgctgctcagctttgcgtgcttgcggaggac 270 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||||| || ||||| || ||| |||||||||| |||||| Sbjct: 271 tgtgaccagcctgattatgtcaagctggtgaaggctctttgctctgagcacaacgttcac 330 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcagggctttgcaagatcgac 240 |||||||||||||| || ||||||||||| || || ||| | |||||||||||||| || Sbjct: 331 ctggttactgtgcctagcgctaaaactcttggcgaatggtctgggctttgcaagattgat 390 Query: 241 actgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggt 300 ||||||||||||| ||||||||||| || ||||| || |||| |||||||||||||| Sbjct: 391 tctgagggcaaggcgaggaaggttgtgggttgctcctgtgttgtcgtcaaggactatggc 450 Query: 301 gaagaatccgagggccttaacatcgtgcagcagtatgtcaagtc 344 |||||||| |||||||||||||| || ||| |||| |||||||| Sbjct: 451 gaagaatctgagggccttaacatagttcaggagtacgtcaagtc 494
>ref|XM_477174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 1115 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 1174 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1175 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 1234 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 1235 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 1294 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1295 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 1339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 285 tgtcaagg 292 |||||||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Minus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 7266232 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 7266173 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 7266172 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 7266113 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 7266112 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 7266053 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 7266052 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 7266008 Score = 256 bits (129), Expect = 7e-65 Identities = 201/225 (89%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 2647174 actgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtctc 2647233 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2647234 cgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgaggac 2647293 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || ||||| |||||||| || ||| | |||||||| || || ||||||||||| |||||| Sbjct: 2647294 tgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttcac 2647353 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 2647354 cttgttaccgtgcctagtgctaagactcttggcgagtgggcaggg 2647398 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 2648042 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 2648101 Query: 285 tgtcaagg 292 |||||||| Sbjct: 2648102 tgtcaagg 2648109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 7265747 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 7265688 Query: 285 tgtcaagg 292 |||||||| Sbjct: 7265687 tgtcaagg 7265680 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 290 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 2648197 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 2648248
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Minus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 106716 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 106657 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 106656 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 106597 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 106596 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 106537 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 106536 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 106492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 106231 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 106172 Query: 285 tgtcaagg 292 |||||||| Sbjct: 106171 tgtcaagg 106164
>dbj|AK071026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K20, full insert sequence Length = 2015 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 1115 actgctctgcagcttgtgatgaagaagtcaagcgctcatgatgggctcgtgaaggggctc 1174 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 |||||||| |||||| |||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1175 cgtgaggcggccaaggccattgagaagcatgccgctcagctttgcgtgcttgctgaggac 1234 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 ||||||||||||||||| || ||| | || |||||||| ||||||||||||||||||||| Sbjct: 1235 tgtgaccagcctgattatgtcaagttggtcaaggcactctgcgctgagcacaatgttcac 1294 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 1295 ctcgttaccgtgcctagtgctaaaactcttggcgagtgggcaggg 1339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| || ||||||||||||| |||||||| ||||||||||| ||| | || Sbjct: 1600 gctttgcaagattgattctgagggcaaggcgaggaaggtcgtaggctgctcctgcgtcgt 1659 Query: 285 tgtcaagg 292 |||||||| Sbjct: 1660 tgtcaagg 1667
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 256 bits (129), Expect = 7e-65 Identities = 201/225 (89%) Strand = Plus / Plus Query: 1 actgctctacagcttgtcatgaagaagtcaagtgctcatgatggccttgtgaaggggctc 60 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 72892 actgctctgcagcttgtgatgaagaagtcaagtgctcatgatgggcttgtgaagggtctc 72951 Query: 61 cgtgaggctgccaagtccattgagaagcatgctgctcagctttgtgtgctggctgaggat 120 ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 72952 cgtgaggctgccaaggccatcgagaagcatgctgctcagctttgtgtgcttgctgaggac 73011 Query: 121 tgtgaccagcctgattacgtgaagcttgttaaggcactatgcgctgagcacaatgttcac 180 || ||||| |||||||| || ||| | |||||||| || || ||||||||||| |||||| Sbjct: 73012 tgcgaccaacctgattatgtcaagttggttaaggctctgtgtgctgagcacaacgttcac 73071 Query: 181 ctggttactgtgccaagtgctaaaactctcggagagtgggcaggg 225 || ||||| ||||| |||||||| ||||| || |||||||||||| Sbjct: 73072 cttgttaccgtgcctagtgctaagactcttggcgagtgggcaggg 73116 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgt 284 |||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | || Sbjct: 73760 gctttgcaagattgactctgagggcaaggcaaggaaggttgtgggctgctcctgcgtcgt 73819 Query: 285 tgtcaagg 292 |||||||| Sbjct: 73820 tgtcaagg 73827 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 290 aggactatggtgaagaatccgagggccttaacatcgtgcagcagtatgtcaa 341 |||||||||||||||| || |||||||||||||| |||||| | |||||||| Sbjct: 73915 aggactatggtgaagagtctgagggccttaacatagtgcaggactatgtcaa 73966
>emb|BX819283.1|CNS0A9Q1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 113 bits (57), Expect = 6e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 220 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 279 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 |||||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 280 gtgaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 339 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 340 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 399 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 400 aaggttgttggatgctc 416
>ref|NM_179850.1| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.3 mRNA, complete cds Length = 694 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 239 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 298 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 299 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 358 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 359 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 418 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 419 aaggttgttggatgctc 435
>ref|NM_128766.4| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.1 mRNA, complete cds Length = 759 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>ref|NM_179849.2| Arabidopsis thaliana structural constituent of ribosome AT2G32060 transcript variant AT2G32060.2 mRNA, complete cds Length = 723 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY133636.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 435 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 163 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 222 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 223 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 282 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 283 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 342 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 343 aaggttgttggatgctc 359
>gb|AY050324.1| Arabidopsis thaliana At2g32060/F22D22.19 mRNA, complete cds Length = 696 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 241 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 300 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 301 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 360 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 361 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 420 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 421 aaggttgttggatgctc 437
>gb|AY085161.1| Arabidopsis thaliana clone 13453 mRNA, complete sequence Length = 732 Score = 105 bits (53), Expect = 2e-19 Identities = 161/197 (81%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 277 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 336 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgttcacctggttactgtgccaagt 198 || ||||||||||| || || |||||||| |||| | | || ||||||| |||||| Sbjct: 337 gtcaagcttgttaaagctctttgcgctgaccacagcatcaaattgcttactgttccaagt 396 Query: 199 gctaaaactctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaagg 258 || ||||| ||||| || ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 397 gccaaaacactcggcgaatgggctggtctttgcaagattgattctgagggcaatgcaagg 456 Query: 259 aaggttgtaggctgctc 275 |||||||| || ||||| Sbjct: 457 aaggttgttggatgctc 473
>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence Length = 112428 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 82 gagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattacgt 140 |||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| Sbjct: 54496 gagaagcatgctgcacagctctgtgttcttgctgaggattgtgaccaacctgattacgt 54438
>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE Length = 89977 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 ||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||| Sbjct: 44250 attgagaagcatgctgcacagctttgtgttctagctgaagattgtgaccaacctgattat 44191 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgtt 177 || || | || || || || ||||| |||||||||||| Sbjct: 44190 gtcaaattggtgaaagccctctgcgcagagcacaatgtt 44152
>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete sequence Length = 103194 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 |||||||||| | ||||||||| ||||| |||||||| ||||| |||| |||||||| Sbjct: 49702 attgagaagcgtaatgctcagctctgtgtcctggctgaagattgcaaccaacctgattat 49761 Query: 139 gtgaagcttgttaaggcactatgcgctgagcaca 172 || ||||||||||| || || |||||||| |||| Sbjct: 49762 gtcaagcttgttaaagctctttgcgctgaccaca 49795 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 225 gctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctc 275 |||||||||||| || |||||||||| |||||||||||||| || ||||| Sbjct: 49936 gctttgcaagattgattctgagggcaatgcaaggaaggttgttggatgctc 49986
>gb|AF154659.1| Nicotiana tabacum clone PR50 mRNA sequence Length = 708 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgaccagcctgattac 138 ||||||||||||||||| |||||||||||||| || ||||| || |||||||| || || Sbjct: 479 attgagaagcatgctgcgcagctttgtgtgctagcagaggactgcgaccagccagactat 420 Query: 139 gtgaagcttgttaaggcactatgcgctgagcacaatgt 176 || ||||| || || || || || ||||| |||||||| Sbjct: 419 gtcaagctggtcaaagctctttgtgctgatcacaatgt 382
>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence Length = 93881 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 97 cagctttgtgtgctggctgaggattgtgaccagcctgattacgtgaagcttgttaaggca 156 ||||||||||| || || || ||||||||||||||||| || || || ||||| ||||| Sbjct: 18473 cagctttgtgttcttgcagaagattgtgaccagcctgactatgttaaacttgtcaaggct 18414 Query: 157 ctatgcgctgagcacaatgtt 177 || || ||||||||||||||| Sbjct: 18413 ctttgtgctgagcacaatgtt 18393
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 33 tgctcatgatggccttgtgaaggggctccgtgaggct 69 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 32274991 tgctcatgatgaccttgtcaagggtctccgtgaggct 32275027
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 33 tgctcatgatggccttgtgaaggggctccgtgaggct 69 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 8760 tgctcatgatgaccttgtcaagggtctccgtgaggct 8796
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 33 tgctcatgatggccttgtgaaggggctccgtgaggct 69 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 126665 tgctcatgatgaccttgtcaagggtctccgtgaggct 126701
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 33 tgctcatgatggccttgtgaaggggctccgtgaggct 69 ||||||||||| |||||| ||||| |||||||||||| Sbjct: 32365503 tgctcatgatgaccttgtcaagggtctccgtgaggct 32365539
>dbj|AB180426.1| Plutella xylostella mRNA for Ribosomal protein S21, complete cds Length = 494 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 ctcggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgta 267 ||||| |||||||| || || ||||||||||||| || |||||||| |||||| |||| Sbjct: 294 ctcggtgagtgggccggtctgtgcaagatcgacaaggacggcaaggctaggaagattgtt 353 Query: 268 ggctgctc 275 || ||||| Sbjct: 354 ggatgctc 361
>ref|NM_101461.3| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.1 mRNA, complete cds Length = 861 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 289 aaggact 295 ||||||| Sbjct: 556 aaggact 562
>ref|NM_179342.1| Arabidopsis thaliana structural constituent of ribosome AT1G15930 transcript variant AT1G15930.2 mRNA, complete cds Length = 758 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 289 aaggact 295 ||||||| Sbjct: 453 aaggact 459
>gb|AY099330.1| Periplaneta americana ribosomal protein S12 mRNA, partial cds Length = 512 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 ggcaaggcaaggaaggttgtaggctgctcttgcattgttgtcaaggactatggtgaaga 305 |||||||| ||||| ||||| || ||||| || ||||||| ||||| ||||||||||| Sbjct: 307 ggcaaggctaggaaagttgtcggttgctcctgtgttgttgttaaggattatggtgaaga 365
>gb|AY054130.1| Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 435 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 313 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 372 Query: 289 aaggact 295 ||||||| Sbjct: 373 aaggact 379
>gb|AF380626.1|AF380626 Arabidopsis thaliana At1g15930/T24D18_3 mRNA, complete cds Length = 692 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 393 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 452 Query: 289 aaggact 295 ||||||| Sbjct: 453 aaggact 459
>emb|BX813855.1|CNS0AEMV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 635 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 372 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 431 Query: 289 aaggact 295 ||||||| Sbjct: 432 aaggact 438
>emb|BX815848.1|CNS0ABMM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 369 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 428 Query: 289 aaggact 295 ||||||| Sbjct: 429 aaggact 435
>emb|BX818653.1|CNS0AB7K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 687 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 358 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 417 Query: 289 aaggact 295 ||||||| Sbjct: 418 aaggact 424
>gb|AY084613.1| Arabidopsis thaliana clone 11328 mRNA, complete sequence Length = 782 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 496 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 555 Query: 289 aaggact 295 ||||||| Sbjct: 556 aaggact 562
>gb|BT012865.1| Lycopersicon esculentum clone 113957F, mRNA sequence Length = 749 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 79 attgagaagcatgctgctcagctttgtgtgctggctgaggattgtgacca 128 ||||||||||||||||| || ||||| || |||| ||||| |||||||| Sbjct: 223 attgagaagcatgctgcccaactttgcgttttggcagaggactgtgacca 272
>ref|XM_988289.1| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1, transcript variant 3 (Ptprz1), mRNA Length = 6857 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 ttttggtccttggtttaattat 410 |||||||||||||||||||||| Sbjct: 5110 ttttggtccttggtttaattat 5131
>ref|XM_620293.3| PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1, transcript variant 1 (Ptprz1), mRNA Length = 7098 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 ttttggtccttggtttaattat 410 |||||||||||||||||||||| Sbjct: 5351 ttttggtccttggtttaattat 5372
>emb|AJ133130.1|MMU133130 Mus musculus mRNA for DSD-1-proteoglycan Length = 6887 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 ttttggtccttggtttaattat 410 |||||||||||||||||||||| Sbjct: 5131 ttttggtccttggtttaattat 5152
>dbj|AK141126.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230061O04 product:protein tyrosine phosphatase, receptor type Z, polypeptide 1, full insert sequence Length = 3428 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 ttttggtccttggtttaattat 410 |||||||||||||||||||||| Sbjct: 2900 ttttggtccttggtttaattat 2921
>gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, complete sequence Length = 185830 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 ttttggtccttggtttaattat 410 |||||||||||||||||||||| Sbjct: 81993 ttttggtccttggtttaattat 82014
>gb|AY769327.1| Bombyx mori ribosomal protein S12 (RpS12) mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 211 ggagagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggc 270 ||||| ||||| || || |||||||| |||| || |||||||||||||| |||| ||| Sbjct: 307 ggagaatgggctggtctctgcaagattgacaaggatggcaaggcaaggaaaattgtcggc 366 Query: 271 tgctc 275 ||||| Sbjct: 367 tgctc 371
>gb|AC108946.4| Mus musculus BAC clone RP23-134N13 from 3, complete sequence Length = 183446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 ttttggtccttggtttaatta 409 ||||||||||||||||||||| Sbjct: 128149 ttttggtccttggtttaatta 128129
>gb|AC107367.13| Mus musculus chromosome 3, clone RP23-331D18, complete sequence Length = 204398 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 cttggtttaattatgcttttgttct 421 ||||||| ||||||||||||||||| Sbjct: 122257 cttggttaaattatgcttttgttct 122233
>gb|AF125446.1| Caenorhabditis elegans cosmid R05C11, complete sequence Length = 45770 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaaggactatggtgaagaat 307 ||||||||||||||||||||| Sbjct: 42319 tcaaggactatggtgaagaat 42339
>gb|DQ066262.1| Ixodes scapularis isolate ISN-L-128 ribosomal protein S12 mRNA, complete cds Length = 399 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 214 gagtgggcagggctttgcaagatcgacactgagggcaaggc 254 |||||||| || || ||||||||||||| ||||||||||| Sbjct: 256 gagtgggcgggcctgtgcaagatcgacaaagagggcaaggc 296
>ref|NM_067760.2| Caenorhabditis elegans R05C11.3 (ATPase) mRNA, complete cds Length = 4001 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaaggactatggtgaagaat 307 ||||||||||||||||||||| Sbjct: 2673 tcaaggactatggtgaagaat 2693
>gb|AC116337.2| Homo sapiens chromosome 5 clone CTD-2503O16, complete sequence Length = 122363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 tgcttttgttcttgggcttat 430 ||||||||||||||||||||| Sbjct: 59204 tgcttttgttcttgggcttat 59224
>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence Length = 178176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ggttactgtgccaagtgctaa 203 ||||||||||||||||||||| Sbjct: 102535 ggttactgtgccaagtgctaa 102555
>emb|AJ010708.1|CEL010708 Caenorhabditis elegans mRNA for calcium ATPase, isoform 2 Length = 4023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaaggactatggtgaagaat 307 ||||||||||||||||||||| Sbjct: 2695 tcaaggactatggtgaagaat 2715
>gb|AC021573.10| Homo sapiens chromosome 11, clone RP11-411D10, complete sequence Length = 144656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 atgtcaagtctcaatagttga 355 ||||||||||||||||||||| Sbjct: 35134 atgtcaagtctcaatagttga 35114
>gb|AC121533.6| Mus musculus chromosome 9, clone RP24-555P22, complete sequence Length = 175009 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 cttggtttaattatgcttttgttc 420 ||||||||| |||||||||||||| Sbjct: 129394 cttggtttatttatgcttttgttc 129371
>ref|XM_752372.1| Ustilago maydis 521 hypothetical protein (UM01318.1) partial mRNA Length = 438 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 259 aaggttgtaggctgctcttgcattgttgtcaaggactatggtga 302 ||||| || |||||||||||| | || ||||||||||| ||||| Sbjct: 346 aaggtggtcggctgctcttgcgtcgtcgtcaaggactacggtga 389
>gb|AC132684.3| Mus musculus BAC clone RP23-277L20 from 9, complete sequence Length = 182976 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cttggtttaattatgcttttgttc 420 ||||||||| |||||||||||||| Sbjct: 63956 cttggtttatttatgcttttgttc 63979
>emb|Z95330.11|HS73E16 Human DNA sequence from clone RP1-73E16 on chromosome 20q12-13.3 Contains ESTs, STSs and GSSs, complete sequence Length = 43922 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 taggctgctcttgcattgtt 285 |||||||||||||||||||| Sbjct: 23710 taggctgctcttgcattgtt 23691
>emb|AL359382.23| Human DNA sequence from clone RP11-631F7 on chromosome 6 Contains the 3' part of a novel gene, a novel gene and a CpG island, complete sequence Length = 183935 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ggacatttgagcctttgttt 495 |||||||||||||||||||| Sbjct: 109721 ggacatttgagcctttgttt 109702
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel Leucine Rich Repeat domain-containing protein (4930449E07Rik), the Atpaf2 gene for ATP synthase mitochondrial F1 complex assembly factor 2, the gene for a novel protein (4933439F18Rik), an acid phosphatase 1 soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for developmentally regulated GTP binding protein 2, the 5' end of the Myo15 gene for myosin XV and four CpG islands, complete sequence Length = 207440 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 tccgtgaggctgccaagtccattg 82 |||||||||||| ||||||||||| Sbjct: 5077 tccgtgaggctgacaagtccattg 5054
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 agatattgttgatttggaca 480 |||||||||||||||||||| Sbjct: 718599 agatattgttgatttggaca 718618
>emb|BX537263.17| Zebrafish DNA sequence from clone DKEY-208G1 in linkage group 14, complete sequence Length = 166940 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cttgtgttgggcattttggt 395 |||||||||||||||||||| Sbjct: 148309 cttgtgttgggcattttggt 148328
>gb|AC113609.3| Homo sapiens BAC clone RP11-174B22 from 4, complete sequence Length = 83881 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 taattctctttgcaatatta 562 |||||||||||||||||||| Sbjct: 35091 taattctctttgcaatatta 35072
>gb|AC025062.6| Homo sapiens chromosome 8, clone RP11-685B14, complete sequence Length = 190459 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 taggctgctcttgcattgtt 285 |||||||||||||||||||| Sbjct: 166836 taggctgctcttgcattgtt 166855
>gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete sequence Length = 45675 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ataattctctttgcaatatt 561 |||||||||||||||||||| Sbjct: 32906 ataattctctttgcaatatt 32925
>gb|AY245452.1| Dermacentor variabilis 40S ribosomal protein S12 mRNA, complete cds Length = 607 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 214 gagtgggcagggctttgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgc 273 |||||||| || || ||||||||||||| || |||||||| ||||| || || |||||| Sbjct: 325 gagtgggccggcctctgcaagatcgacaaggaaggcaaggcgaggaaagtggtcggctgc 384
>ref|NM_071954.2| Caenorhabditis elegans Prion-like-(Q/N-rich)-domain-bearing protein family member (pqn-51) (pqn-51) mRNA, complete cds Length = 1683 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 ataattctctttgcaatatt 561 |||||||||||||||||||| Sbjct: 1536 ataattctctttgcaatatt 1555
>gb|AC141273.2| Homo sapiens chromosome 16 clone RP11-143N13, complete sequence Length = 101561 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 taggctgctcttgcattgtt 285 |||||||||||||||||||| Sbjct: 85590 taggctgctcttgcattgtt 85571
>gb|AC141053.2| Homo sapiens chromosome 16 clone CTD-3076M17, complete sequence Length = 98702 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 taggctgctcttgcattgtt 285 |||||||||||||||||||| Sbjct: 3511 taggctgctcttgcattgtt 3492
>gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, complete sequence Length = 200827 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 taggctgctcttgcattgtt 285 |||||||||||||||||||| Sbjct: 170746 taggctgctcttgcattgtt 170727
>gb|AC096624.23| Mus musculus strain C57BL/6J chromosome 11 clone rp23-326m22, complete sequence Length = 227682 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 tccgtgaggctgccaagtccattg 82 |||||||||||| ||||||||||| Sbjct: 10557 tccgtgaggctgacaagtccattg 10580
>emb|AJ011717.1|CPA011717 Cyanophora paradoxa mRNA for 40s ribosomal protein S12 Length = 560 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 208 ctcggagagtgggcagggctttgcaagatcgacactgagggcaa 251 ||||| ||||||| || |||||||||||||||| |||||||| Sbjct: 310 ctcggcgagtgggtcggcctttgcaagatcgacaaggagggcaa 353
>dbj|AK111197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-D10, full insert sequence Length = 2992 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 gctgctgcctttagcgtaaa 523 |||||||||||||||||||| Sbjct: 972 gctgctgcctttagcgtaaa 953
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 40.1 bits (20), Expect = 7.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 229 tgcaagatcgacactgagggcaaggcaaggaaggttgtaggctgctcttgcattgttgtc 288 |||||||| || ||||||| || || ||||||||||| || ||||| || |||||||| Sbjct: 7774 tgcaagattgattctgagggtaatgccaggaaggttgttggatgctcatgtcttgttgtc 7833 Query: 289 aagg 292 |||| Sbjct: 7834 aagg 7837 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,289,573 Number of Sequences: 3902068 Number of extensions: 5289573 Number of successful extensions: 96721 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96460 Number of HSP's gapped (non-prelim): 260 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)