ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baalk18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mR... 167 5e-38
2dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
4dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
5dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
6gb|AY105478.1| Zea mays PCO081228 mRNA sequence 125 2e-25
7ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group... 72 2e-09
8ref|XM_482186.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mR... 72 2e-09
11dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
13dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
14ref|XM_799968.1| Trypanosoma cruzi strain CL Brener trans-sialid... 42 2.1
15ref|XM_800850.1| Trypanosoma cruzi strain CL Brener trans-sialid... 42 2.1
16emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chr... 42 2.1
17gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 8.5
18gb|AY545229.1| Brassica rapa putative beta-carotene hydroxylase ... 40 8.5
19gb|DQ156907.1| Brassica rapa beta-carotene hydroxylase gene, com... 40 8.5
20emb|AL391297.6| Human DNA sequence from clone RP4-598G3 on chrom... 40 8.5
21emb|AL133347.28| Human DNA sequence from clone RP1-274L14 on chr... 40 8.5
22dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 8.5
23gb|AC012195.9| Homo sapiens chromosome 15, clone RP11-44F11, com... 40 8.5
24emb|BX663611.13| Zebrafish DNA sequence from clone DKEY-148N20 i... 40 8.5
25gb|AC011114.5|AC011114 Homo sapiens, clone RP11-115A23, complete... 40 8.5
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
27gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complet... 40 8.5
28dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
29dbj|AB085793.1| Squash leaf curl Philippines virus DNA-A, comple... 40 8.5
30emb|AL133238.3|CNS01DUB Human chromosome 14 DNA sequence BAC C-2... 40 8.5
31gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.5
32gb|AC147262.4| Mus musculus BAC clone RP24-211P15 from 3, comple... 40 8.5
33gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complet... 40 8.5
34emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on ch... 40 8.5
35emb|AL137785.6|CNS01DWN Human chromosome 14 DNA sequence BAC R-1... 40 8.5 
>dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mRNA for BRI1-KD
           interacting protein 103, complete cds
          Length = 2366

 Score =  167 bits (84), Expect = 5e-38
 Identities = 306/378 (80%), Gaps = 4/378 (1%)
 Strand = Plus / Plus

                                                                       
Query: 85  acatgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatg 144
           |||||||||||||||| || ||| |||| |||||||||||| ||||||||||| ||||||
Sbjct: 94  acatgggaatggaggttgttggaactgaggctgcaccagcagaggttaaagtaactgatg 153

                                                                       
Query: 145 aggaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaa 204
             ||||||  |||||||||||| || | ||||| |||| ||||| | ||| |||||||| 
Sbjct: 154 gagaagtgaaccttttccaagagaatg-aaagtaaagcaactgccaaggaacgtgaggag 212

                                                                       
Query: 205 gcagctgtttttggttcagacaatggcaaagctgcggcaaat---gccccaaatggctct 261
           || | | ||||||||||||| ||  ||| |||| | ||||||   ||| |||||||| ||
Sbjct: 213 gcggttctttttggttcagataacagcacagctacagcaaatggagccgcaaatggcgct 272

                                                                       
Query: 262 gacatggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacaca 321
           ||  ||||||| ||||||||||||| ||| || ||||||||  | | | ||||  | |  
Sbjct: 273 gatttggcacccccaaaggatgcagaggaggactggcctgaagctaggaaaacacatagc 332

                                                                       
Query: 322 ttctactttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcag 381
           |||| |||||||||| |||||| | |||||||||||||||||| |   ||  |||| |||
Sbjct: 333 ttcttctttgtcaagatccgcttacttgaggaccctaagctgaaaatgaagattgatcag 392

                                                                       
Query: 382 gctgagaaggacttccaaaataagatccaagctcggtccaagattattgaggctataaaa 441
           || || ||||||||||| || ||||| |||||||| ||  | ||| ||||||||||||||
Sbjct: 393 gcagaaaaggacttccagaagaagattcaagctcgttctcaaatttttgaggctataaaa 452

                             
Query: 442 gctaagaagactgagcgc 459
           || ||||||| |||||||
Sbjct: 453 gccaagaagaatgagcgc 470



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                       
Query: 492 tgctgagaacaggcaatataatgaagcctttaatgagaagttggaggagatgaagccttt 551
           ||||||||||| |||||| || |||||| | | |||||||||| ||| |||  | ||| |
Sbjct: 503 tgctgagaacaagcaatacaacgaagccgtaagtgagaagttgaaggcgatagaacctct 562

                                                                       
Query: 552 cagaaaccgtttaggcaagttccgtgacgaaaataacgctatgcgggcggagagtgcagg 611
            |||||||||||||| |||||||| || ||||| || ||||| |||||  || |||||||
Sbjct: 563 tagaaaccgtttaggaaagttccgcgatgaaaacaatgctatccgggcacagggtgcagg 622

            
Query: 612 c 612
           |
Sbjct: 623 c 623
to top
>dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101D09, full
           insert sequence
          Length = 2295

 Score =  167 bits (84), Expect = 5e-38
 Identities = 306/378 (80%), Gaps = 4/378 (1%)
 Strand = Plus / Plus

                                                                       
Query: 85  acatgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatg 144
           |||||||||||||||| || ||| |||| |||||||||||| ||||||||||| ||||||
Sbjct: 96  acatgggaatggaggttgttggaactgaggctgcaccagcagaggttaaagtaactgatg 155

                                                                       
Query: 145 aggaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaa 204
             ||||||  |||||||||||| || | ||||| |||| ||||| | ||| |||||||| 
Sbjct: 156 gagaagtgaaccttttccaagagaatg-aaagtaaagcaactgccaaggaacgtgaggag 214

                                                                       
Query: 205 gcagctgtttttggttcagacaatggcaaagctgcggcaaat---gccccaaatggctct 261
           || | | ||||||||||||| ||  ||| |||| | ||||||   ||| |||||||| ||
Sbjct: 215 gcggttctttttggttcagataacagcacagctacagcaaatggagccgcaaatggcgct 274

                                                                       
Query: 262 gacatggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacaca 321
           ||  ||||||| ||||||||||||| ||| || ||||||||  | | | ||||  | |  
Sbjct: 275 gatttggcacccccaaaggatgcagaggaggactggcctgaagctaggaaaacacatagc 334

                                                                       
Query: 322 ttctactttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcag 381
           |||| |||||||||| |||||| | |||||||||||||||||| |   ||  |||| |||
Sbjct: 335 ttcttctttgtcaagatccgcttacttgaggaccctaagctgaaaatgaagattgatcag 394

                                                                       
Query: 382 gctgagaaggacttccaaaataagatccaagctcggtccaagattattgaggctataaaa 441
           || || ||||||||||| || ||||| |||||||| ||  | ||| ||||||||||||||
Sbjct: 395 gcagaaaaggacttccagaagaagattcaagctcgttctcaaatttttgaggctataaaa 454

                             
Query: 442 gctaagaagactgagcgc 459
           || ||||||| |||||||
Sbjct: 455 gccaagaagaatgagcgc 472



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                       
Query: 492 tgctgagaacaggcaatataatgaagcctttaatgagaagttggaggagatgaagccttt 551
           ||||||||||| |||||| || |||||| | | |||||||||| ||| |||  | ||| |
Sbjct: 505 tgctgagaacaagcaatacaacgaagccgtaagtgagaagttgaaggcgatagaacctct 564

                                                                       
Query: 552 cagaaaccgtttaggcaagttccgtgacgaaaataacgctatgcgggcggagagtgcagg 611
            |||||||||||||| |||||||| || ||||| || ||||| |||||  || |||||||
Sbjct: 565 tagaaaccgtttaggaaagttccgcgatgaaaacaatgctatccgggcacagggtgcagg 624

            
Query: 612 c 612
           |
Sbjct: 625 c 625
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  157 bits (79), Expect = 5e-35
 Identities = 298/369 (80%), Gaps = 4/369 (1%)
 Strand = Plus / Plus

                                                                            
Query: 85       acatgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatg 144
                |||||||||||||||| || ||| |||| |||||||||||| ||||||||||| ||||||
Sbjct: 10786777 acatgggaatggaggttgttggaactgaggctgcaccagcagaggttaaagtaactgatg 10786836

                                                                            
Query: 145      aggaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaa 204
                  ||||||  |||||||||||| || | ||||| |||| ||||| | ||| |||||||| 
Sbjct: 10786837 gagaagtgaaccttttccaagagaatg-aaagtaaagcaactgccaaggaacgtgaggag 10786895

                                                                            
Query: 205      gcagctgtttttggttcagacaatggcaaagctgcggcaaat---gccccaaatggctct 261
                || | | ||||||||||||| ||  ||| |||| | ||||||   ||| |||||||| ||
Sbjct: 10786896 gcggttctttttggttcagataacagcacagctacagcaaatggagccgcaaatggcgct 10786955

                                                                            
Query: 262      gacatggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacaca 321
                ||  ||||||| ||||||||||||| ||| || ||||||||  | | | ||||  | |  
Sbjct: 10786956 gatttggcacccccaaaggatgcagaggaggactggcctgaagctaggaaaacacatagc 10787015

                                                                            
Query: 322      ttctactttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcag 381
                |||| |||||||||| |||||| | |||||||||||||||||| |   ||  |||| |||
Sbjct: 10787016 ttcttctttgtcaagatccgcttacttgaggaccctaagctgaaaatgaagattgatcag 10787075

                                                                            
Query: 382      gctgagaaggacttccaaaataagatccaagctcggtccaagattattgaggctataaaa 441
                || || ||||||||||| || ||||| |||||||| ||  | ||| ||||||||||||||
Sbjct: 10787076 gcagaaaaggacttccagaagaagattcaagctcgttctcaaatttttgaggctataaaa 10787135

                         
Query: 442      gctaagaag 450
                || ||||||
Sbjct: 10787136 gccaagaag 10787144



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                            
Query: 492      tgctgagaacaggcaatataatgaagcctttaatgagaagttggaggagatgaagccttt 551
                ||||||||||| |||||| || |||||| | | |||||||||| ||| |||  | ||| |
Sbjct: 10787394 tgctgagaacaagcaatacaacgaagccgtaagtgagaagttgaaggcgatagaacctct 10787453

                                                                            
Query: 552      cagaaaccgtttaggcaagttccgtgacgaaaataacgctatgcgggcggagagtgcagg 611
                 |||||||||||||| |||||||| || ||||| || ||||| |||||  || |||||||
Sbjct: 10787454 tagaaaccgtttaggaaagttccgcgatgaaaacaatgctatccgggcacagggtgcagg 10787513

                 
Query: 612      c 612
                |
Sbjct: 10787514 c 10787514
to top
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score =  157 bits (79), Expect = 5e-35
 Identities = 298/369 (80%), Gaps = 4/369 (1%)
 Strand = Plus / Plus

                                                                         
Query: 85    acatgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatg 144
             |||||||||||||||| || ||| |||| |||||||||||| ||||||||||| ||||||
Sbjct: 10500 acatgggaatggaggttgttggaactgaggctgcaccagcagaggttaaagtaactgatg 10559

                                                                         
Query: 145   aggaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaa 204
               ||||||  |||||||||||| || | ||||| |||| ||||| | ||| |||||||| 
Sbjct: 10560 gagaagtgaaccttttccaagagaatg-aaagtaaagcaactgccaaggaacgtgaggag 10618

                                                                         
Query: 205   gcagctgtttttggttcagacaatggcaaagctgcggcaaat---gccccaaatggctct 261
             || | | ||||||||||||| ||  ||| |||| | ||||||   ||| |||||||| ||
Sbjct: 10619 gcggttctttttggttcagataacagcacagctacagcaaatggagccgcaaatggcgct 10678

                                                                         
Query: 262   gacatggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacaca 321
             ||  ||||||| ||||||||||||| ||| || ||||||||  | | | ||||  | |  
Sbjct: 10679 gatttggcacccccaaaggatgcagaggaggactggcctgaagctaggaaaacacatagc 10738

                                                                         
Query: 322   ttctactttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcag 381
             |||| |||||||||| |||||| | |||||||||||||||||| |   ||  |||| |||
Sbjct: 10739 ttcttctttgtcaagatccgcttacttgaggaccctaagctgaaaatgaagattgatcag 10798

                                                                         
Query: 382   gctgagaaggacttccaaaataagatccaagctcggtccaagattattgaggctataaaa 441
             || || ||||||||||| || ||||| |||||||| ||  | ||| ||||||||||||||
Sbjct: 10799 gcagaaaaggacttccagaagaagattcaagctcgttctcaaatttttgaggctataaaa 10858

                      
Query: 442   gctaagaag 450
             || ||||||
Sbjct: 10859 gccaagaag 10867



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                         
Query: 492   tgctgagaacaggcaatataatgaagcctttaatgagaagttggaggagatgaagccttt 551
             ||||||||||| |||||| || |||||| | | |||||||||| ||| |||  | ||| |
Sbjct: 11117 tgctgagaacaagcaatacaacgaagccgtaagtgagaagttgaaggcgatagaacctct 11176

                                                                         
Query: 552   cagaaaccgtttaggcaagttccgtgacgaaaataacgctatgcgggcggagagtgcagg 611
              |||||||||||||| |||||||| || ||||| || ||||| |||||  || |||||||
Sbjct: 11177 tagaaaccgtttaggaaagttccgcgatgaaaacaatgctatccgggcacagggtgcagg 11236

              
Query: 612   c 612
             |
Sbjct: 11237 c 11237
to top
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score =  157 bits (79), Expect = 5e-35
 Identities = 298/369 (80%), Gaps = 4/369 (1%)
 Strand = Plus / Plus

                                                                          
Query: 85     acatgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatg 144
              |||||||||||||||| || ||| |||| |||||||||||| ||||||||||| ||||||
Sbjct: 123395 acatgggaatggaggttgttggaactgaggctgcaccagcagaggttaaagtaactgatg 123454

                                                                          
Query: 145    aggaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaa 204
                ||||||  |||||||||||| || | ||||| |||| ||||| | ||| |||||||| 
Sbjct: 123455 gagaagtgaaccttttccaagagaatg-aaagtaaagcaactgccaaggaacgtgaggag 123513

                                                                          
Query: 205    gcagctgtttttggttcagacaatggcaaagctgcggcaaat---gccccaaatggctct 261
              || | | ||||||||||||| ||  ||| |||| | ||||||   ||| |||||||| ||
Sbjct: 123514 gcggttctttttggttcagataacagcacagctacagcaaatggagccgcaaatggcgct 123573

                                                                          
Query: 262    gacatggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacaca 321
              ||  ||||||| ||||||||||||| ||| || ||||||||  | | | ||||  | |  
Sbjct: 123574 gatttggcacccccaaaggatgcagaggaggactggcctgaagctaggaaaacacatagc 123633

                                                                          
Query: 322    ttctactttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcag 381
              |||| |||||||||| |||||| | |||||||||||||||||| |   ||  |||| |||
Sbjct: 123634 ttcttctttgtcaagatccgcttacttgaggaccctaagctgaaaatgaagattgatcag 123693

                                                                          
Query: 382    gctgagaaggacttccaaaataagatccaagctcggtccaagattattgaggctataaaa 441
              || || ||||||||||| || ||||| |||||||| ||  | ||| ||||||||||||||
Sbjct: 123694 gcagaaaaggacttccagaagaagattcaagctcgttctcaaatttttgaggctataaaa 123753

                       
Query: 442    gctaagaag 450
              || ||||||
Sbjct: 123754 gccaagaag 123762



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                          
Query: 492    tgctgagaacaggcaatataatgaagcctttaatgagaagttggaggagatgaagccttt 551
              ||||||||||| |||||| || |||||| | | |||||||||| ||| |||  | ||| |
Sbjct: 124012 tgctgagaacaagcaatacaacgaagccgtaagtgagaagttgaaggcgatagaacctct 124071

                                                                          
Query: 552    cagaaaccgtttaggcaagttccgtgacgaaaataacgctatgcgggcggagagtgcagg 611
               |||||||||||||| |||||||| || ||||| || ||||| |||||  || |||||||
Sbjct: 124072 tagaaaccgtttaggaaagttccgcgatgaaaacaatgctatccgggcacagggtgcagg 124131

               
Query: 612    c 612
              |
Sbjct: 124132 c 124132
to top
>gb|AY105478.1| Zea mays PCO081228 mRNA sequence
          Length = 732

 Score =  125 bits (63), Expect = 2e-25
 Identities = 129/151 (85%)
 Strand = Plus / Plus

                                                                       
Query: 266 tggcacctccaaaggatgcagcggatgagtggcctgagccgaagcaaacttacacattct 325
           |||||||||||| |||||    ||||||||||||||| || |||||||||||  | ||||
Sbjct: 335 tggcacctccaacggatgtgaaggatgagtggcctgaacctaagcaaacttatgccttct 394

                                                                       
Query: 326 actttgtcaaggtccgctcatttgaggaccctaagctgagagcaaaacttgagcaggctg 385
           ||||  |||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||
Sbjct: 395 acttcatcaaggtccgctcatttgaggatcctaaactgagggcaaaactcgagcaagctg 454

                                          
Query: 386 agaaggacttccaaaataagatccaagctcg 416
           | || || ||||| || ||||||||||||||
Sbjct: 455 acaaagaattccagaagaagatccaagctcg 485



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/138 (81%), Gaps = 4/138 (2%)
 Strand = Plus / Plus

                                                                       
Query: 87  atgggaatggaggtcgtcggagctgaagctgcaccagcacaggttaaagtagctgatgag 146
           ||||||||||||||||| || |||||||| ||||||||| || | |||||| |||||   
Sbjct: 178 atgggaatggaggtcgttggtgctgaagcagcaccagcagagatcaaagtatctgat--- 234

                                                                       
Query: 147 gaagtggcccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagc 206
           || |||   || |||||||| |||| ||||  |||| ||||| |  || |||||||| ||
Sbjct: 235 gatgtgaatctattccaagagaagg-aaagcaaagcaactgctaaagaacgtgaggaggc 293

                             
Query: 207 agctgtttttggttcaga 224
           ||||||||||||||||||
Sbjct: 294 agctgtttttggttcaga 311
to top
>ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group), P0671F11.9 mRNA
          Length = 2293

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 288 ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
           ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 307 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 366

                                                                       
Query: 348 tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
           |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 367 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 426

                                       
Query: 408 ccaagctcggtccaagattattgaggct 435
            |||||||||||| | ||| ||||||||
Sbjct: 427 tcaagctcggtcccatatttttgaggct 454



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
           |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 175 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 233

                 
Query: 215 ttggtt 220
           ||||||
Sbjct: 234 ttggtt 239
to top
>ref|XM_482186.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 288 ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
           ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 342 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 401

                                                                       
Query: 348 tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
           |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 402 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 461

                                       
Query: 408 ccaagctcggtccaagattattgaggct 435
            |||||||||||| | ||| ||||||||
Sbjct: 462 tcaagctcggtcccatatttttgaggct 489



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
           |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 210 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 268

                 
Query: 215 ttggtt 220
           ||||||
Sbjct: 269 ttggtt 274
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                            
Query: 288      ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
                ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 18470507 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 18470566

                                                                            
Query: 348      tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
                |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 18470567 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 18470626

                                            
Query: 408      ccaagctcggtccaagattattgaggct 435
                 |||||||||||| | ||| ||||||||
Sbjct: 18470627 tcaagctcggtcccatatttttgaggct 18470654



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                            
Query: 155      ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
                |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 18470375 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 18470433

                      
Query: 215      ttggtt 220
                ||||||
Sbjct: 18470434 ttggtt 18470439
to top
>dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mRNA for BRI1-KD
           interacting protein 131, complete cds
          Length = 2275

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 288 ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
           ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 313 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 372

                                                                       
Query: 348 tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
           |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 373 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 432

                                       
Query: 408 ccaagctcggtccaagattattgaggct 435
            |||||||||||| | ||| ||||||||
Sbjct: 433 tcaagctcggtcccatatttttgaggct 460



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
           |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 181 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 239

                 
Query: 215 ttggtt 220
           ||||||
Sbjct: 240 ttggtt 245
to top
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 288   ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
             ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 52530 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 52589

                                                                         
Query: 348   tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
             |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 52590 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 52649

                                         
Query: 408   ccaagctcggtccaagattattgaggct 435
              |||||||||||| | ||| ||||||||
Sbjct: 52650 tcaagctcggtcccatatttttgaggct 52677



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                         
Query: 155   ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
             |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 52398 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 52456

                   
Query: 215   ttggtt 220
             ||||||
Sbjct: 52457 ttggtt 52462
to top
>dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113F23, full
           insert sequence
          Length = 2281

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 288 ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
           ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 342 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 401

                                                                       
Query: 348 tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
           |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 402 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 461

                                       
Query: 408 ccaagctcggtccaagattattgaggct 435
            |||||||||||| | ||| ||||||||
Sbjct: 462 tcaagctcggtcccatatttttgaggct 489



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
           |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 210 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 268

                 
Query: 215 ttggtt 220
           ||||||
Sbjct: 269 ttggtt 274
to top
>dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G07, full
           insert sequence
          Length = 2293

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 120/148 (81%)
 Strand = Plus / Plus

                                                                       
Query: 288 ggatgagtggcctgagccgaagcaaacttacacattctactttgtcaaggtccgctcatt 347
           ||||||||||||||| || ||||||||| |||| |||| |||||| |   || | |||| 
Sbjct: 307 ggatgagtggcctgaacctaagcaaactcacacgttcttctttgttagaatctgttcata 366

                                                                       
Query: 348 tgaggaccctaagctgagagcaaaacttgagcaggctgagaaggacttccaaaataagat 407
           |||||| ||||  ||||  ||||||||||| || ||||| ||||| | ||| || |||||
Sbjct: 367 tgaggatcctagcctgaaggcaaaacttgaacaagctgacaaggagtgccagaagaagat 426

                                       
Query: 408 ccaagctcggtccaagattattgaggct 435
            |||||||||||| | ||| ||||||||
Sbjct: 427 tcaagctcggtcccatatttttgaggct 454



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                       
Query: 155 ccttttccaagacaaggnaaagtcaagcgactgcaagggagcgtgaggaagcagctgttt 214
           |||||||||||| |||| |||||   || ||||| | |||||||| ||| ||||||||||
Sbjct: 175 ccttttccaagataagg-aaagtagggctactgccaaggagcgtggggaggcagctgttt 233

                 
Query: 215 ttggtt 220
           ||||||
Sbjct: 234 ttggtt 239
to top
>ref|XM_799968.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053509629.10) partial mRNA
          Length = 2763

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  gagaagttggaggagatgaag 546
            |||||||||||||||||||||
Sbjct: 1276 gagaagttggaggagatgaag 1296
to top
>ref|XM_800850.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053510331.10) partial mRNA
          Length = 2952

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 526  gagaagttggaggagatgaag 546
            |||||||||||||||||||||
Sbjct: 1276 gagaagttggaggagatgaag 1296
to top
>emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chromosome 16, complete
              sequence
          Length = 193062

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 460    gctgctgttcttgctgagcta 480
              |||||||||||||||||||||
Sbjct: 150235 gctgctgttcttgctgagcta 150255
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cggagctgaagctgcaccag 123
              ||||||||||||||||||||
Sbjct: 298929 cggagctgaagctgcaccag 298948
to top
>gb|AY545229.1| Brassica rapa putative beta-carotene hydroxylase (BCH) mRNA,
           complete cds
          Length = 1073

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 527 agaagttggaggagatgaag 546
           ||||||||||||||||||||
Sbjct: 846 agaagttggaggagatgaag 865
to top
>gb|DQ156907.1| Brassica rapa beta-carotene hydroxylase gene, complete cds
          Length = 3603

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 527  agaagttggaggagatgaag 546
            ||||||||||||||||||||
Sbjct: 3401 agaagttggaggagatgaag 3420
to top
>emb|AL391297.6| Human DNA sequence from clone RP4-598G3 on chromosome 1p31.1-31.3
             Contains a novel gene, complete sequence
          Length = 113041

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 430   gaggctataaaagctaagaa 449
             ||||||||||||||||||||
Sbjct: 50211 gaggctataaaagctaagaa 50230
to top
>emb|AL133347.28| Human DNA sequence from clone RP1-274L14 on chromosome 6q25.2-26
             Contains part of a novel gene, a signal recognition
             particle 72kD (SRP72) pseudogene and three CpG islands,
             complete sequence
          Length = 100732

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   aagcctttcagaaaccgttt 563
             ||||||||||||||||||||
Sbjct: 74447 aagcctttcagaaaccgttt 74466
to top
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 527     agaagttggaggagatgaag 546
               ||||||||||||||||||||
Sbjct: 1621301 agaagttggaggagatgaag 1621320
to top
>gb|AC012195.9| Homo sapiens chromosome 15, clone RP11-44F11, complete sequence
          Length = 106057

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   ccgctgagtgctgagaacag 503
             ||||||||||||||||||||
Sbjct: 51465 ccgctgagtgctgagaacag 51484
to top
>emb|BX663611.13| Zebrafish DNA sequence from clone DKEY-148N20 in linkage group 14,
             complete sequence
          Length = 213131

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   tataaaagctaagaagactg 454
             ||||||||||||||||||||
Sbjct: 72251 tataaaagctaagaagactg 72232
to top
>gb|AC011114.5|AC011114 Homo sapiens, clone RP11-115A23, complete sequence
          Length = 101971

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ccgctgagtgctgagaacag 503
             ||||||||||||||||||||
Sbjct: 74566 ccgctgagtgctgagaacag 74547
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       tggccgctgccccgccgcca 36
                ||||||||||||||||||||
Sbjct: 30511570 tggccgctgccccgccgcca 30511551
to top
>gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complete sequence
          Length = 212104

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    caaacttacacattctactt 329
              ||||||||||||||||||||
Sbjct: 116380 caaacttacacattctactt 116399
to top
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435H01
          Length = 160141

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tggccgctgccccgccgcca 36
              ||||||||||||||||||||
Sbjct: 139833 tggccgctgccccgccgcca 139814
to top
>dbj|AB085793.1| Squash leaf curl Philippines virus DNA-A, complete sequence
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  ctgacatggcacctccaaag 279
            ||||||||||||||||||||
Sbjct: 2588 ctgacatggcacctccaaag 2569
to top
>emb|AL133238.3|CNS01DUB Human chromosome 14 DNA sequence BAC C-2510G9 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185132

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 185   ctgcaagggagcgtgaggaagcag 208
             |||||||||||| |||||||||||
Sbjct: 10723 ctgcaagggagcctgaggaagcag 10746
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     ctgagcgcgctgctgttcttgctg 475
               ||||||||||||||||||| ||||
Sbjct: 3242036 ctgagcgcgctgctgttctggctg 3242013
to top
>gb|AC147262.4| Mus musculus BAC clone RP24-211P15 from 3, complete sequence
          Length = 168562

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 358  aagctgagagcaaaacttga 377
            ||||||||||||||||||||
Sbjct: 2789 aagctgagagcaaaacttga 2770
to top
>gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complete sequence
          Length = 173988

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  aagctgagagcaaaacttga 377
            ||||||||||||||||||||
Sbjct: 6240 aagctgagagcaaaacttga 6259
to top
>emb|AL773540.18| Mouse DNA sequence from clone RP23-177L19 on chromosome 2, complete
             sequence
          Length = 217148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   ctgcaccagcacaggttaaagtag 138
             |||| |||||||||||||||||||
Sbjct: 94156 ctgctccagcacaggttaaagtag 94133
to top
>emb|AL137785.6|CNS01DWN Human chromosome 14 DNA sequence BAC R-151G14 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155729

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 185  ctgcaagggagcgtgaggaagcag 208
            |||||||||||| |||||||||||
Sbjct: 6591 ctgcaagggagcctgaggaagcag 6568


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,805,950
Number of Sequences: 3902068
Number of extensions: 4805950
Number of successful extensions: 97628
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97385
Number of HSP's gapped (non-prelim): 220
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top