Clone Name | baalk11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 Score = 680 bits (343), Expect = 0.0 Identities = 530/590 (89%), Gaps = 2/590 (0%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagaggatgtcgagtttgtggatgtg 60 ||||||||| |||||||||||| | |||||||||| |||||||| ||||||||| ||||| Sbjct: 415 agcaagcggagcggtggggtgctg-agcttcaccaggaggatgttgagtttgtgaatgtg 473 Query: 61 aagagcagaccgtttgttattcgtagcagcgaccgagtaggtgaaatgtcatagtgtaat 120 ||||||||||||||||||||||||||||| || || | |||||||||| ||||||||||| Sbjct: 474 aagagcagaccgtttgttattcgtagcagtgatcgtg-aggtgaaatgccatagtgtaat 532 Query: 121 cattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaattttggag 180 |||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 533 cattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggag 592 Query: 181 cagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagggtcaagt 240 ||||||||||| |||||||||||||||||||||||||| || || | ||||||||||| Sbjct: 593 tagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagt 652 Query: 241 tcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttgacaaaata 300 |||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 653 tcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaata 712 Query: 301 tgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaagctatgca 360 ||| | || ||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 713 tgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgca 772 Query: 361 ggaccggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacat 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 773 ggaccggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacat 832 Query: 421 ttcaatacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcag 480 ||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| Sbjct: 833 ttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaa 892 Query: 481 ttgaggagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatggg 540 ||| ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 893 ctgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggc 952 Query: 541 atagggcatactccaaatagtcagctgctagaaggtcaaattgaacttga 590 ||||| || |||||||| |||||| || || ||||||||||||| ||||| Sbjct: 953 ataggacacactccaaacagtcagttgttacaaggtcaaattgatcttga 1002
>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 Score = 418 bits (211), Expect = e-114 Identities = 329/366 (89%), Gaps = 2/366 (0%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagaggatgtcgagtttgtggatgtg 60 ||||||||| |||||||||||| | |||||||||| |||||||| ||||||||| ||||| Sbjct: 388 agcaagcggagcggtggggtgctg-agcttcaccaggaggatgttgagtttgtgaatgtg 446 Query: 61 aagagcagaccgtttgttattcgtagcagcgaccgagtaggtgaaatgtcatagtgtaat 120 ||||||||||||||||||||||||||||| || || | |||||||||| ||||||||||| Sbjct: 447 aagagcagaccgtttgttattcgtagcagtgatcgtg-aggtgaaatgccatagtgtaat 505 Query: 121 cattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaattttggag 180 |||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||| Sbjct: 506 cattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggag 565 Query: 181 cagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagggtcaagt 240 ||||||||||| |||||||||||||||||||||||||| || || | ||||||||||| Sbjct: 566 tagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagt 625 Query: 241 tcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttgacaaaata 300 |||||| || ||||||||||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 626 tcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaata 685 Query: 301 tgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaagctatgca 360 ||| | || ||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 686 tgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgca 745 Query: 361 ggaccg 366 |||||| Sbjct: 746 ggaccg 751 Score = 218 bits (110), Expect = 2e-53 Identities = 179/202 (88%) Strand = Plus / Plus Query: 389 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 448 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 810 Query: 449 gcaataccaaaggacagatgtccggtattcagttgaggagaatcgatactggagaggaaa 508 ||||| ||||||| |||||||| |||||||| ||| ||||| ||| || ||||||||| Sbjct: 811 gcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaat 870 Query: 509 aagttcttgaagtgaaaggtctattttatgggatagggcatactccaaatagtcagctgc 568 ||||||||| |||||||||||||| ||||| ||||| || |||||||| |||||| || Sbjct: 871 cagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgt 930 Query: 569 tagaaggtcaaattgaacttga 590 || ||||||||||||| ||||| Sbjct: 931 tacaaggtcaaattgatcttga 952
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 321 bits (162), Expect = 1e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 99 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 158 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 27642273 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 27642332 Query: 159 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 218 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27642333 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 27642392 Query: 219 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 278 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 27642393 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 27642452 Query: 279 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 338 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 27642453 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 27642512 Query: 339 tacgagcatccaaagctatgcaggaccggt 368 |||||||||||||||||||||||||||||| Sbjct: 27642513 tacgagcatccaaagctatgcaggaccggt 27642542 Score = 264 bits (133), Expect = 3e-67 Identities = 202/225 (89%) Strand = Plus / Plus Query: 366 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27643177 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 27643236 Query: 426 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 485 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 27643237 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 27643296 Query: 486 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 545 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 27643297 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 27643356 Query: 546 gcatactccaaatagtcagctgctagaaggtcaaattgaacttga 590 || |||||||| |||||| || || ||||||||||||| ||||| Sbjct: 27643357 acacactccaaacagtcagttgttacaaggtcaaattgatcttga 27643401 Score = 123 bits (62), Expect = 7e-25 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagaggatgtcgagtttgtggatgtg 60 ||||||||| |||||||||||| | |||||||||| |||||||| ||||||||| ||||| Sbjct: 27641746 agcaagcggagcggtggggtgctg-agcttcaccaggaggatgttgagtttgtgaatgtg 27641804 Query: 61 aagagcagaccgtttgttattcgtagcag 89 ||||||||||||||||||||||||||||| Sbjct: 27641805 aagagcagaccgtttgttattcgtagcag 27641833
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 321 bits (162), Expect = 1e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 99 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 158 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 99266 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 99325 Query: 159 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 218 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 99326 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 99385 Query: 219 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 278 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 99386 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 99445 Query: 279 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 338 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 99446 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 99505 Query: 339 tacgagcatccaaagctatgcaggaccggt 368 |||||||||||||||||||||||||||||| Sbjct: 99506 tacgagcatccaaagctatgcaggaccggt 99535 Score = 264 bits (133), Expect = 3e-67 Identities = 202/225 (89%) Strand = Plus / Plus Query: 366 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 100170 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 100229 Query: 426 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 485 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 100230 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 100289 Query: 486 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 545 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 100290 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 100349 Query: 546 gcatactccaaatagtcagctgctagaaggtcaaattgaacttga 590 || |||||||| |||||| || || ||||||||||||| ||||| Sbjct: 100350 acacactccaaacagtcagttgttacaaggtcaaattgatcttga 100394 Score = 123 bits (62), Expect = 7e-25 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagaggatgtcgagtttgtggatgtg 60 ||||||||| |||||||||||| | |||||||||| |||||||| ||||||||| ||||| Sbjct: 98739 agcaagcggagcggtggggtgctg-agcttcaccaggaggatgttgagtttgtgaatgtg 98797 Query: 61 aagagcagaccgtttgttattcgtagcag 89 ||||||||||||||||||||||||||||| Sbjct: 98798 aagagcagaccgtttgttattcgtagcag 98826
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 321 bits (162), Expect = 1e-84 Identities = 243/270 (90%) Strand = Plus / Plus Query: 99 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 158 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 21375 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 21434 Query: 159 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 218 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 21435 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 21494 Query: 219 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 278 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 21495 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 21554 Query: 279 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 338 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 21555 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 21614 Query: 339 tacgagcatccaaagctatgcaggaccggt 368 |||||||||||||||||||||||||||||| Sbjct: 21615 tacgagcatccaaagctatgcaggaccggt 21644 Score = 264 bits (133), Expect = 3e-67 Identities = 202/225 (89%) Strand = Plus / Plus Query: 366 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 425 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22279 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 22338 Query: 426 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtccggtattcagttgag 485 |||||||||||||||||||||| ||||| ||||||| |||||||| |||||||| ||| Sbjct: 22339 tacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaa 22398 Query: 486 gagaatcgatactggagaggaaaaagttcttgaagtgaaaggtctattttatgggatagg 545 ||||| ||| || ||||||||| ||||||||| |||||||||||||| ||||| ||||| Sbjct: 22399 gagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcatagg 22458 Query: 546 gcatactccaaatagtcagctgctagaaggtcaaattgaacttga 590 || |||||||| |||||| || || ||||||||||||| ||||| Sbjct: 22459 acacactccaaacagtcagttgttacaaggtcaaattgatcttga 22503 Score = 123 bits (62), Expect = 7e-25 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 1 agcaagcggngcggtggggtgcagnagcttcaccaagaggatgtcgagtttgtggatgtg 60 ||||||||| |||||||||||| | |||||||||| |||||||| ||||||||| ||||| Sbjct: 20848 agcaagcggagcggtggggtgctg-agcttcaccaggaggatgttgagtttgtgaatgtg 20906 Query: 61 aagagcagaccgtttgttattcgtagcag 89 ||||||||||||||||||||||||||||| Sbjct: 20907 aagagcagaccgtttgttattcgtagcag 20935
>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680; T32G6.20) mRNA, complete cds Length = 1802 Score = 111 bits (56), Expect = 3e-21 Identities = 251/316 (79%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 617 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 676 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 677 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 736 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 334 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| || || Sbjct: 737 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 796 Query: 335 caactacgagcatccaaagctatgcaggaccggttgattatggcgaatgtttcagagtac 394 || | |||| ||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 797 cagttgagagcttccaaggctatgcaagataggttggttatggcgaatgtttcagagtga 856 Query: 395 tcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcggcaata 454 ||||||| || ||||| ||||| |||| ||| || ||| | ||||| || | |||| | Sbjct: 857 tcaacaatccaaacatcacagtgcattacaacacggaaaccgtggacgtattgagcaaca 916 Query: 455 ccaaaggacagatgtc 470 |||| ||||||||||| Sbjct: 917 ccaagggacagatgtc 932
>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/ oxidoreductase/ thioredoxin-disulfide reductase AT2G41680 mRNA, complete cds Length = 1800 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 623 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 682 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 683 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 742 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 743 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 795
>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680/T32G6.20) mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 607 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 666 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 667 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 726 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 727 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 779
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 79032 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 78973 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 78972 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 78913 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 78912 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 78860 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 366 ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 425 ||||| ||||||||||||||||||||| ||||||| || ||||| ||||| |||| ||| Sbjct: 78480 ggttggttatggcgaatgtttcagagtgatcaacaatccaaacatcacagtgcattacaa 78421 Query: 426 tacagaagctgtggatgttgtcggcaataccaaaggacagatgtc 470 || ||| | ||||| || | |||| ||||| ||||||||||| Sbjct: 78420 cacggaaaccgtggacgtattgagcaacaccaagggacagatgtc 78376
>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds Length = 1783 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 620 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 679 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 680 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 739 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 740 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 792
>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 613 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 672 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 673 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 732 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 733 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 785
>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 250 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 309 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 310 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 369 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 370 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 422
>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 155 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 214 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 624 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 683 Query: 215 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 274 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 684 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 743 Query: 275 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 327 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 744 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 796
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 185 ggtatcagcgcatgtgcaatatgtgatgg 213 ||||| ||||||||||||||||||||||| Sbjct: 1148142 ggtattagcgcatgtgcaatatgtgatgg 1148170
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 570 agaaggtcaaattgaacttgat 591 |||||||||||||||||||||| Sbjct: 122482 agaaggtcaaattgaacttgat 122503
>dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete genome Length = 17388 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 actcaacaaccccaacataaca 414 |||||||||||||||||||||| Sbjct: 13569 actcaacaaccccaacataaca 13590
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 570 agaaggtcaaattgaacttgat 591 |||||||||||||||||||||| Sbjct: 1837648 agaaggtcaaattgaacttgat 1837669
>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete sequence Length = 204167 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gatatatttgacaaaatatgc 303 ||||||||||||||||||||| Sbjct: 52265 gatatatttgacaaaatatgc 52285
>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence Length = 143758 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 aaggtctattttatgggatag 544 ||||||||||||||||||||| Sbjct: 126788 aaggtctattttatgggatag 126808
>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete sequence Length = 202803 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 aaggtctattttatgggatag 544 ||||||||||||||||||||| Sbjct: 104962 aaggtctattttatgggatag 104982
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5 Length = 341050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gttggaggtggagatacagct 271 ||||||||||||||||||||| Sbjct: 249327 gttggaggtggagatacagct 249347
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 caaccccaacataacagtaca 419 ||||||||||||||||||||| Sbjct: 50963 caaccccaacataacagtaca 50983
>gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase gene, complete cds Length = 1377 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gttggaggtggagatacagct 271 ||||||||||||||||||||| Sbjct: 1122 gttggaggtggagatacagct 1142
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 aaagttcttgaagtgaaagg 527 |||||||||||||||||||| Sbjct: 103759 aaagttcttgaagtgaaagg 103740
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 caagaggatgtcgagtttgt 53 |||||||||||||||||||| Sbjct: 962574 caagaggatgtcgagtttgt 962555
>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence Length = 234041 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 atatatttgacaaaatatgc 303 |||||||||||||||||||| Sbjct: 154499 atatatttgacaaaatatgc 154480
>gb|AC073316.6| Homo sapiens BAC clone RP11-191P7 from 7, complete sequence Length = 148930 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 atcgatactggagaggaaaa 509 |||||||||||||||||||| Sbjct: 134712 atcgatactggagaggaaaa 134731
>gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B5 genomic sequence Length = 35254 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tgtgcaatatgtgatggagc 216 |||||||||||||||||||| Sbjct: 17891 tgtgcaatatgtgatggagc 17872
>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete sequence Length = 185850 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 162 gtgaagaagaattttggagcagaggtat 189 ||||||||||| ||||||| |||||||| Sbjct: 104313 gtgaagaagaaatttggagaagaggtat 104340
>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence Length = 158314 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 agtttgtggatgtgaagagc 66 |||||||||||||||||||| Sbjct: 109722 agtttgtggatgtgaagagc 109741
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 aaaagttcttgaagtgaaag 526 |||||||||||||||||||| Sbjct: 108519 aaaagttcttgaagtgaaag 108500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,590,350 Number of Sequences: 3902068 Number of extensions: 4590350 Number of successful extensions: 81524 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81380 Number of HSP's gapped (non-prelim): 134 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)