ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baaln12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110061.1| Zea mays CL537_1 mRNA sequence 234 3e-58
2gb|BT016551.1| Zea mays clone Contig384 mRNA sequence 226 6e-56
3dbj|AK069602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 2e-53
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 48 0.033
8gb|AC116515.11| Mus musculus chromosome 7, clone RP24-331B9, com... 44 0.52
9gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosom... 44 0.52
10gb|AE004762.1| Pseudomonas aeruginosa PAO1, section 323 of 529 o... 44 0.52
11emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chr... 44 0.52
12ref|NM_197819.1| Oryza sativa (japonica cultivar-group) putative... 42 2.0
13gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 42 2.0
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
15gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Canc... 42 2.0
16dbj|AK103251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
17gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Canc... 42 2.0
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
19emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chro... 42 2.0
20emb|CR974468.5| Pig DNA sequence from clone PigE-178B21 on chrom... 40 8.1
21gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, co... 40 8.1
22gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, compl... 40 8.1
23dbj|AK135602.1| Mus musculus adult male adrenal gland cDNA, RIKE... 40 8.1
24gb|AC155709.5| Mus musculus 10 BAC RP24-200F4 (Roswell Park Canc... 40 8.1
25gb|AC158636.5| Mus musculus 10 BAC RP23-402A24 (Roswell Park Can... 40 8.1
26gb|AC024084.4|AC024084 Human Chromosome 7 clone RP11-212C18, com... 40 8.1
27dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 40 8.1
28gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, co... 40 8.1
29gb|AY102584.1| Gibberella zeae strain NRRL 28336 trichothecene g... 40 8.1
30gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 8.1
31gb|AC154335.1| Mus musculus BAC clone RP24-499C1 from 13, comple... 40 8.1
32emb|AL844575.4| Mouse DNA sequence from clone RP23-156F1 on chro... 40 8.1
33emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chr... 40 8.1 
>gb|AY110061.1| Zea mays CL537_1 mRNA sequence
          Length = 1098

 Score =  234 bits (118), Expect = 3e-58
 Identities = 395/489 (80%)
 Strand = Plus / Plus

                                                                       
Query: 81  ctcgcagcgaccgttccggttgaggcggttctctttgacatcgatggcactctgtgcgac 140
           ||||| || |||||||||||  |||||||||| || |||||||| || || |||||||||
Sbjct: 23  ctcgcggcaaccgttccggtccaggcggttctgttcgacatcgacgggaccctgtgcgac 82

                                                                       
Query: 141 tcagaccctcttcatcacgtcgctttccaagaaatgcttcttgcgattgggtacaacaac 200
           || || || || || ||||||||||||||||| |||||||| | ||| ||||||||||| 
Sbjct: 83  tcggatcccctccaccacgtcgctttccaagagatgcttctcgagatcgggtacaacaat 142

                                                                       
Query: 201 ggcgtgcccatagacgacgagttcttcataaacaacattgctggaaggagcgatgttgaa 260
           |||||||| |||||||| ||||||||||| || ||||| ||||| ||||| || || |||
Sbjct: 143 ggcgtgccgatagacgaggagttcttcatcaagaacatcgctgggaggagtgacgtcgaa 202

                                                                       
Query: 261 gctgcccagaatttgtttccagactggcctctcgaaaaggggctgaaattcctagaggag 320
           |||||||||||  |||| || ||||||   || || |||||||| |||||||||||||| 
Sbjct: 203 gctgcccagaacctgttcccggactgggagcttgagaaggggctcaaattcctagaggac 262

                                                                       
Query: 321 aaagagatcaaatacagaagtttggcaatggagcgcctagagcctgtaaagggacttggc 380
           || ||    |||||||| ||| ||||||  |||||| | | |||||| || || || |  
Sbjct: 263 aaggaagcaaaatacaggagtctggcaaaagagcgcttggtgcctgtgaaaggcctcgcg 322

                                                                       
Query: 381 aagctggttcagtgggtgaaagatcacggctacaaacgtgctgcagtaaccaatgcccca 440
           ||| |||| |||||||||||||| ||||| ||||| || || || || ||||| |     
Sbjct: 323 aaggtggtccagtgggtgaaagaccacgggtacaagcgcgcggcggtgaccaacgnnnnn 382

                                                                       
Query: 441 aggatcaatgcagagctgatgatcaaacttcttggtctatcagacttcttccaggccgtg 500
           |||||||| || ||||||||||||   || || || || || ||||||||||||||||| 
Sbjct: 383 aggatcaacgcggagctgatgatctcgctcctgggcctctcggacttcttccaggccgtc 442

                                                                       
Query: 501 atagttggaggtgaatgcgagaagccaaagcccgcacccttcccatacctgaaggccctc 560
           || || ||||| || |||||| ||||||||||||| || | ||| ||||| | |||||||
Sbjct: 443 atcgtcggaggcgagtgcgagcagccaaagcccgcgccgtacccttacctcagggccctc 502

                    
Query: 561 aaggagctc 569
           |||||||||
Sbjct: 503 aaggagctc 511
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>gb|BT016551.1| Zea mays clone Contig384 mRNA sequence
          Length = 1157

 Score =  226 bits (114), Expect = 6e-56
 Identities = 397/490 (81%), Gaps = 1/490 (0%)
 Strand = Plus / Plus

                                                                       
Query: 81  ctcgcagcgaccgttccggttgaggcggttctctttgacatcgatggcactctgtgcgac 140
           ||||| || |||||||||||  |||||||||| || |||||||| || || |||||||||
Sbjct: 134 ctcgcggcaaccgttccggtccaggcggttctgttcgacatcgacgggaccctgtgcgac 193

                                                                       
Query: 141 tcagaccctcttcatcacgtcgctttccaagaaatgcttcttgcgattgggtacaacaac 200
           || || || || || ||||||||||||||||| |||||||| | ||| ||||||||||| 
Sbjct: 194 tcggatcccctccaccacgtcgctttccaagagatgcttctcgagatcgggtacaacaat 253

                                                                       
Query: 201 ggcgtgcccatagacgacgagttcttcataaacaacattgctggaaggagcgatgttgaa 260
           |||||||| |||||||| |  || ||||| || ||||| ||||| ||||| || || |||
Sbjct: 254 ggcgtgccgatagacgaggtttttttcatcaagaacatcgctgggaggagtgacgtcgaa 313

                                                                       
Query: 261 gctgcccagaatttgtttccagactggcctctcgaaaaggggctgaaattcctagaggag 320
           |||||||||||  |||| || ||||||   || || |||||||| |||||||||||||| 
Sbjct: 314 gctgcccagaacctgttcccggactgggagcttgagaaggggctcaaattcctagaggac 373

                                                                       
Query: 321 aaagagatcaaatacagaagtttggcaatggagcgcctagagcctgtaaagggacttggc 380
           || ||    |||||||| ||| ||||||  |||||| | | |||||| || || || |  
Sbjct: 374 aaggaagcaaaatacaggagtctggcaaaagagcgcttggtgcctgtgaaaggcctcgcg 433

                                                                       
Query: 381 aagctggttcagtgggtgaaagatcacggctacaaacg-tgctgcagtaaccaatgcccc 439
           ||| |||| |||||||||||||| ||||| ||||| || ||| || || ||||| |||||
Sbjct: 434 aaggtggtccagtgggtgaaagaccacgggtacaagcgctgcggcggtgaccaacgcccc 493

                                                                       
Query: 440 aaggatcaatgcagagctgatgatcaaacttcttggtctatcagacttcttccaggccgt 499
            |||||||| || ||||||||||||   || || || || || |||||||||||||||||
Sbjct: 494 caggatcaacgcggagctgatgatctcgctcctgggcctctcggacttcttccaggccgt 553

                                                                       
Query: 500 gatagttggaggtgaatgcgagaagccaaagcccgcacccttcccatacctgaaggccct 559
            || || ||||| || |||||| ||||||||||||| || | ||| ||||| | ||||||
Sbjct: 554 catcgtcggaggcgagtgcgagcagccaaagcccgcgccgtacccttacctcagggccct 613

                     
Query: 560 caaggagctc 569
           ||||||||||
Sbjct: 614 caaggagctc 623
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>dbj|AK069602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025H03, full
           insert sequence
          Length = 1922

 Score =  218 bits (110), Expect = 2e-53
 Identities = 188/214 (87%)
 Strand = Plus / Plus

                                                                       
Query: 100 ttgaggcggttctctttgacatcgatggcactctgtgcgactcagaccctcttcatcacg 159
           ||||||| ||||| || ||||| ||||| ||  ||||||||||||| ||||||||||| |
Sbjct: 169 ttgaggcagttctgttcgacattgatgggaccttgtgcgactcagatcctcttcatcatg 228

                                                                       
Query: 160 tcgctttccaagaaatgcttcttgcgattgggtacaacaacggcgtgcccatagacgacg 219
           | || ||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| |
Sbjct: 229 tggccttccaagaaatgcttcttgagattgggtataacaacggtgtgccaatagacgagg 288

                                                                       
Query: 220 agttcttcataaacaacattgctggaaggagcgatgttgaagctgcccagaatttgtttc 279
           |||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |
Sbjct: 289 agtttttcataaacaatattgctggaaggagtgatgttgaagctgctcagaatttgttcc 348

                                             
Query: 280 cagactggcctctcgaaaaggggctgaaattcct 313
           | || ||||| || || |||||||||||||||||
Sbjct: 349 ctgattggccccttgagaaggggctgaaattcct 382
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  155 bits (78), Expect = 2e-34
 Identities = 192/230 (83%)
 Strand = Plus / Minus

                                                                            
Query: 339      agtttggcaatggagcgcctagagcctgtaaagggacttggcaagctggttcagtgggtg 398
                |||||||||| ||||||  | || ||||||||||| ||||  ||  ||||||||||||| 
Sbjct: 14333640 agtttggcaaaggagcgtttggaacctgtaaagggccttgctaaagtggttcagtgggtc 14333581

                                                                            
Query: 399      aaagatcacggctacaaacgtgctgcagtaaccaatgccccaaggatcaatgcagagctg 458
                |||||||| || ||||| ||||| || |||||||||||||| ||||| ||| | ||||| 
Sbjct: 14333580 aaagatcatggatacaagcgtgcggctgtaaccaatgcccccaggattaattccgagctc 14333521

                                                                            
Query: 459      atgatcaaacttcttggtctatcagacttcttccaggccgtgatagttggaggtgaatgc 518
                ||||||   |||||||| ||  |||| |||||||||||||| || |||||||| ||||| 
Sbjct: 14333520 atgatctcccttcttggcctcacagatttcttccaggccgtcatcgttggaggcgaatgt 14333461

                                                                  
Query: 519      gagaagccaaagcccgcacccttcccatacctgaaggccctcaaggagct 568
                |||||||| || ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 14333460 gagaagccgaaacccgccccattcccctacctgaaggctctcaaggagct 14333411



 Score =  149 bits (75), Expect = 1e-32
 Identities = 120/135 (88%)
 Strand = Plus / Minus

                                                                            
Query: 185      gattgggtacaacaacggcgtgcccatagacgacgagttcttcataaacaacattgctgg 244
                ||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 14333966 gattgggtataacaacggtgtgccaatagacgaggagtttttcataaacaatattgctgg 14333907

                                                                            
Query: 245      aaggagcgatgttgaagctgcccagaatttgtttccagactggcctctcgaaaaggggct 304
                |||||| |||||||||||||| ||||||||||| || || ||||| || || ||||||||
Sbjct: 14333906 aaggagtgatgttgaagctgctcagaatttgttccctgattggccccttgagaaggggct 14333847

                               
Query: 305      gaaattcctagagga 319
                ||||||||| |||||
Sbjct: 14333846 gaaattcctcgagga 14333832



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 100      ttgaggcggttctctttgacatcgatggcactctgtgcgactcagaccctcttcatcacg 159
                ||||||| ||||| || ||||| ||||| ||  ||||||||||||| ||||||||||| |
Sbjct: 14334124 ttgaggcagttctgttcgacattgatgggaccttgtgcgactcagatcctcttcatcatg 14334065

                                        
Query: 160      tcgctttccaagaaatgcttcttg 183
                | || |||||||||||||||||||
Sbjct: 14334064 tggccttccaagaaatgcttcttg 14334041
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score =  155 bits (78), Expect = 2e-34
 Identities = 192/230 (83%)
 Strand = Plus / Minus

                                                                          
Query: 339    agtttggcaatggagcgcctagagcctgtaaagggacttggcaagctggttcagtgggtg 398
              |||||||||| ||||||  | || ||||||||||| ||||  ||  ||||||||||||| 
Sbjct: 150185 agtttggcaaaggagcgtttggaacctgtaaagggccttgctaaagtggttcagtgggtc 150126

                                                                          
Query: 399    aaagatcacggctacaaacgtgctgcagtaaccaatgccccaaggatcaatgcagagctg 458
              |||||||| || ||||| ||||| || |||||||||||||| ||||| ||| | ||||| 
Sbjct: 150125 aaagatcatggatacaagcgtgcggctgtaaccaatgcccccaggattaattccgagctc 150066

                                                                          
Query: 459    atgatcaaacttcttggtctatcagacttcttccaggccgtgatagttggaggtgaatgc 518
              ||||||   |||||||| ||  |||| |||||||||||||| || |||||||| ||||| 
Sbjct: 150065 atgatctcccttcttggcctcacagatttcttccaggccgtcatcgttggaggcgaatgt 150006

                                                                
Query: 519    gagaagccaaagcccgcacccttcccatacctgaaggccctcaaggagct 568
              |||||||| || ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 150005 gagaagccgaaacccgccccattcccctacctgaaggctctcaaggagct 149956



 Score =  149 bits (75), Expect = 1e-32
 Identities = 120/135 (88%)
 Strand = Plus / Minus

                                                                          
Query: 185    gattgggtacaacaacggcgtgcccatagacgacgagttcttcataaacaacattgctgg 244
              ||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 150511 gattgggtataacaacggtgtgccaatagacgaggagtttttcataaacaatattgctgg 150452

                                                                          
Query: 245    aaggagcgatgttgaagctgcccagaatttgtttccagactggcctctcgaaaaggggct 304
              |||||| |||||||||||||| ||||||||||| || || ||||| || || ||||||||
Sbjct: 150451 aaggagtgatgttgaagctgctcagaatttgttccctgattggccccttgagaaggggct 150392

                             
Query: 305    gaaattcctagagga 319
              ||||||||| |||||
Sbjct: 150391 gaaattcctcgagga 150377



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                          
Query: 100    ttgaggcggttctctttgacatcgatggcactctgtgcgactcagaccctcttcatcacg 159
              ||||||| ||||| || ||||| ||||| ||  ||||||||||||| ||||||||||| |
Sbjct: 150669 ttgaggcagttctgttcgacattgatgggaccttgtgcgactcagatcctcttcatcatg 150610

                                      
Query: 160    tcgctttccaagaaatgcttcttg 183
              | || |||||||||||||||||||
Sbjct: 150609 tggccttccaagaaatgcttcttg 150586
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0465E03
          Length = 151206

 Score =  155 bits (78), Expect = 2e-34
 Identities = 192/230 (83%)
 Strand = Plus / Minus

                                                                         
Query: 339   agtttggcaatggagcgcctagagcctgtaaagggacttggcaagctggttcagtgggtg 398
             |||||||||| ||||||  | || ||||||||||| ||||  ||  ||||||||||||| 
Sbjct: 25443 agtttggcaaaggagcgtttggaacctgtaaagggccttgctaaagtggttcagtgggtc 25384

                                                                         
Query: 399   aaagatcacggctacaaacgtgctgcagtaaccaatgccccaaggatcaatgcagagctg 458
             |||||||| || ||||| ||||| || |||||||||||||| ||||| ||| | ||||| 
Sbjct: 25383 aaagatcatggatacaagcgtgcggctgtaaccaatgcccccaggattaattccgagctc 25324

                                                                         
Query: 459   atgatcaaacttcttggtctatcagacttcttccaggccgtgatagttggaggtgaatgc 518
             ||||||   |||||||| ||  |||| |||||||||||||| || |||||||| ||||| 
Sbjct: 25323 atgatctcccttcttggcctcacagatttcttccaggccgtcatcgttggaggcgaatgt 25264

                                                               
Query: 519   gagaagccaaagcccgcacccttcccatacctgaaggccctcaaggagct 568
             |||||||| || ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 25263 gagaagccgaaacccgccccattcccctacctgaaggctctcaaggagct 25214



 Score =  149 bits (75), Expect = 1e-32
 Identities = 120/135 (88%)
 Strand = Plus / Minus

                                                                         
Query: 185   gattgggtacaacaacggcgtgcccatagacgacgagttcttcataaacaacattgctgg 244
             ||||||||| |||||||| ||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 25769 gattgggtataacaacggtgtgccaatagacgaggagtttttcataaacaatattgctgg 25710

                                                                         
Query: 245   aaggagcgatgttgaagctgcccagaatttgtttccagactggcctctcgaaaaggggct 304
             |||||| |||||||||||||| ||||||||||| || || ||||| || || ||||||||
Sbjct: 25709 aaggagtgatgttgaagctgctcagaatttgttccctgattggccccttgagaaggggct 25650

                            
Query: 305   gaaattcctagagga 319
             ||||||||| |||||
Sbjct: 25649 gaaattcctcgagga 25635



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                         
Query: 100   ttgaggcggttctctttgacatcgatggcactctgtgcgactcagaccctcttcatcacg 159
             ||||||| ||||| || ||||| ||||| ||  ||||||||||||| ||||||||||| |
Sbjct: 25927 ttgaggcagttctgttcgacattgatgggaccttgtgcgactcagatcctcttcatcatg 25868

                                     
Query: 160   tcgctttccaagaaatgcttcttg 183
             | || |||||||||||||||||||
Sbjct: 25867 tggccttccaagaaatgcttcttg 25844
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 103    aggcggttctctttgacatcgatggcac 130
              |||| |||||||||||||||||||||||
Sbjct: 408828 aggccgttctctttgacatcgatggcac 408855
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>gb|AC116515.11| Mus musculus chromosome 7, clone RP24-331B9, complete sequence
          Length = 133179

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 377   tggcaagctggttcagtgggtgaaag 402
             ||||||| ||||||||||||||||||
Sbjct: 60006 tggcaaggtggttcagtgggtgaaag 60031
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>gb|AC161245.2| Mus musculus BAC clone RP24-394N21 from chromosome 9, complete sequence
          Length = 177389

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 259   aagctgcccagaatttgtttcc 280
             ||||||||||||||||||||||
Sbjct: 92637 aagctgcccagaatttgtttcc 92616
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>gb|AE004762.1| Pseudomonas aeruginosa PAO1, section 323 of 529 of the complete
            genome
          Length = 10888

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 117  gacatcgatggcactctgtgcg 138
            ||||||||||||||||||||||
Sbjct: 4283 gacatcgatggcactctgtgcg 4304
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>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete
             sequence
          Length = 187876

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 259   aagctgcccagaatttgtttcc 280
             ||||||||||||||||||||||
Sbjct: 39648 aagctgcccagaatttgtttcc 39627
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>ref|NM_197819.1| Oryza sativa (japonica cultivar-group) putative
           beta-phosphoglucomutase (OSJNBa0095C07.1), mRNA
          Length = 1249

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 114 tttgacatcgatggcactctgtgcgactc 142
           ||||||||||||||||| || ||||||||
Sbjct: 150 tttgacatcgatggcaccctctgcgactc 178
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>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
             sequence
          Length = 187707

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 114   tttgacatcgatggcactctgtgcgactc 142
             ||||||||||||||||| || ||||||||
Sbjct: 41401 tttgacatcgatggcaccctctgcgactc 41429
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 114      tttgacatcgatggcactctgtgcgactc 142
                ||||||||||||||||| || ||||||||
Sbjct: 22036857 tttgacatcgatggcaccctctgcgactc 22036885
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>gb|AC158806.4| Mus musculus 10 BAC RP24-89F13 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 227508

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 379   gcaagctggttcagtgggtgaaaga 403
             ||||| |||||||||||||||||||
Sbjct: 61155 gcaagatggttcagtgggtgaaaga 61131
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>dbj|AK103251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123M19, full
           insert sequence
          Length = 1653

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 114 tttgacatcgatggcactctgtgcgactc 142
           ||||||||||||||||| || ||||||||
Sbjct: 469 tttgacatcgatggcaccctctgcgactc 497
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>gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 223529

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 379  gcaagctggttcagtgggtgaaaga 403
            ||||| |||||||||||||||||||
Sbjct: 2742 gcaagatggttcagtgggtgaaaga 2766
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 114      tttgacatcgatggcactctgtgcgactc 142
                ||||||||||||||||| || ||||||||
Sbjct: 22048520 tttgacatcgatggcaccctctgcgactc 22048548
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>emb|AL928680.5| Mouse DNA sequence from clone RP23-396N6 on chromosome 2, complete
              sequence
          Length = 217726

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 376    ttggcaagctggttcagtgggtgaa 400
              |||||||||||| ||||||||||||
Sbjct: 186421 ttggcaagctggctcagtgggtgaa 186397
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>emb|CR974468.5| Pig DNA sequence from clone PigE-178B21 on chromosome 7, complete
             sequence
          Length = 120695

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   tttccaagaaatgcttcttg 183
             ||||||||||||||||||||
Sbjct: 25139 tttccaagaaatgcttcttg 25158
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>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence
          Length = 199993

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    aagagatcaaatacagaagtttgg 345
              ||||||||||||||||||| ||||
Sbjct: 129281 aagagatcaaatacagaaggttgg 129258
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>gb|AC144428.1| Pan troglodytes BAC clone RP43-2C19 from 7, complete sequence
          Length = 208183

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cctagaggagaaagagatca 330
             ||||||||||||||||||||
Sbjct: 88407 cctagaggagaaagagatca 88388
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>dbj|AK135602.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length
           enriched library, clone:7330401N19 product:hypothetical
           protein, full insert sequence
          Length = 1517

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 379 gcaagctggttcagtgggtgaaag 402
           ||||| ||||||||||||||||||
Sbjct: 184 gcaagatggttcagtgggtgaaag 207
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>gb|AC155709.5| Mus musculus 10 BAC RP24-200F4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 176109

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 377   tggcaagctggttcagtgggtgaa 400
             ||||||| ||||||||||||||||
Sbjct: 85473 tggcaagatggttcagtgggtgaa 85450
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>gb|AC158636.5| Mus musculus 10 BAC RP23-402A24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191887

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 377    tggcaagctggttcagtgggtgaa 400
              ||||||| ||||||||||||||||
Sbjct: 154128 tggcaagatggttcagtgggtgaa 154105
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>gb|AC024084.4|AC024084 Human Chromosome 7 clone RP11-212C18, complete sequence
          Length = 183709

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   cctagaggagaaagagatca 330
             ||||||||||||||||||||
Sbjct: 33773 cctagaggagaaagagatca 33754
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>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    acctgaaggccctcaaggag 566
              ||||||||||||||||||||
Sbjct: 198004 acctgaaggccctcaaggag 198023
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>gb|AC165322.12| Mus musculus chromosome 1, clone RP23-127J15, complete sequence
          Length = 185278

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   agctggttcagtgggtgaaa 401
             ||||||||||||||||||||
Sbjct: 52139 agctggttcagtgggtgaaa 52120
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>gb|AY102584.1| Gibberella zeae strain NRRL 28336 trichothecene gene cluster, partial
            sequence
          Length = 18401

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tagacgacgagttcttcata 230
            ||||||||||||||||||||
Sbjct: 1012 tagacgacgagttcttcata 1031
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    catagacgacgagttcttca 228
              ||||||||||||||||||||
Sbjct: 755414 catagacgacgagttcttca 755433
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>gb|AC154335.1| Mus musculus BAC clone RP24-499C1 from 13, complete sequence
          Length = 177948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 549    ctgaaggccctcaaggagct 568
              ||||||||||||||||||||
Sbjct: 171503 ctgaaggccctcaaggagct 171484
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>emb|AL844575.4| Mouse DNA sequence from clone RP23-156F1 on chromosome 2, complete
              sequence
          Length = 190718

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 379    gcaagctggttcagtgggtgaaag 402
              ||||| ||||||||||||||||||
Sbjct: 130579 gcaagatggttcagtgggtgaaag 130556
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>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete
              sequence
          Length = 224628

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    agctggttcagtgggtgaaa 401
              ||||||||||||||||||||
Sbjct: 198419 agctggttcagtgggtgaaa 198400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,531,311
Number of Sequences: 3902068
Number of extensions: 4531311
Number of successful extensions: 88904
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88731
Number of HSP's gapped (non-prelim): 168
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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