ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bastl42g04 | 418 | BY857239 | not_full | gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 | 196 | full | LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) Length = 877 | 38 | -- | --- | 0 | -- | --- | 0 |
| bastl42g02 | 330 | BY857238 | not_full | gb|AC154041.1| Drosophila melanogaster clone BACR43N11, complete sequence Length = 157286 | 500 | not_full | SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) Length = 699 | 16 | -- | --- | 0 | -- | --- | 0 |
| bastl42g01 | 466 | BY857237 | not_full | ref|NM_192804.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2061 | 43 | not_full | NARGL_HUMAN (Q6N069) NMDA receptor-regulated 1-like protein (NARG1-like protein) Length = 864 | 33 | -- | --- | 0 | -- | --- | 0 |
| bastl42f12 | 339 | BY857236 | not_full | gb|AF305912.1|AF305912 Hordeum vulgare EDR1 (EDR1) mRNA, complete cds Length = 3338 | 500 | not_full | DP2L_HALSA (Q9HMX8) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II) [Contains: Hsp-NRC1 polC intein (Hsp-NRC1 pol2 intein)] Length = 1370 | 7 | -- | --- | 0 | -- | --- | 0 |
| bastl42f11 | 384 | BY857235 | not_full | ref|XM_482187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 | 500 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl42f10 | 162 | BY857234 | not_full | dbj|AB031298.1| Siganus guttatus mRNA for growth hormone, complete cds Length = 860 | 6 | not_full | YLB8_CAEEL (P46582) Hypothetical protein C34E10.8 Length = 1024 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl42f09 | 479 | BY857233 | not_full | dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 | 20 | not_full | Y537_MYCPN (P75241) Hypothetical protein MG360 homolog (G12_orf412) Length = 412 | 1 | -- | --- | 0 | -- | --- | 0 |
| bastl42f08 | 447 | BY857232 | full | ref|NM_192819.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2100 | 207 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl42f07 | 413 | BY857231 | not_full | ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3549 | 35 | not_full | SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100 co-activator) (100 kDa coactivator) Length = 910 | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl42f06 | 446 | BY857230 | not_full | gb|AC112230.5| Homo sapiens BAC clone RP11-85D18 from 2, complete sequence Length = 196480 | 21 | not_full | RPA1_TRYBB (P16355) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6) Length = 1744 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl42f05 | 411 | BY857229 | not_full | ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3534 | 139 | not_full | SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS) Length = 1108 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl42f04 | 391 | BY857228 | not_full | dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 | 51 | not_full | MMPL3_MYCTU (O53657) Putative membrane protein mmpL3 Length = 944 | 14 | -- | --- | 0 | -- | --- | 0 |
| bastl42f03 | 407 | BY857227 | not_full | ref|XM_463327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3279 | 103 | not_full | CARB_SYNY3 (Q55756) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain) Length = 1081 | 170 | -- | --- | 0 | -- | --- | 0 |
| bastl42f02 | 425 | BY857226 | full | gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA, complete cds Length = 2923 | 50 | not_full | MCM2_DROME (P49735) DNA replication licensing factor Mcm2 (Minichromosome maintenance 2 protein) (DmMCM2) Length = 887 | 432 | -- | --- | 0 | -- | --- | 0 |
| bastl42f01 | 405 | BY857225 | not_full | dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 | 20 | not_full | NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting partner of anaplastic lymphoma kinase) (Zinc finger C3HC-type protein 1) Length = 502 | 17 | -- | --- | 0 | -- | --- | 0 |
| bastl42e12 | 431 | BY857224 | not_full | ref|NM_193331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2550 | 76 | not_full | RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta) Length = 533 | 62 | -- | --- | 0 | -- | --- | 0 |
| bastl42e11 | 409 | BY857223 | not_full | gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 | 220 | not_full | PHOT1_ARATH (O48963) Phototropin-1 (EC 2.7.11.1) (Non-phototropic hypocotyl protein 1) (Root phototropism protein 1) Length = 996 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl42e10 | 455 | BY857222 | not_full | ref|NM_187173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2688 | 82 | not_full | Y2081_MYCTU (Q10689) Hypothetical protein Rv2081c/MT2143 Length = 146 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl42e09 | 359 | BY857221 | not_full | gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 | 68 | not_full | BT1_MAIZE (P29518) Protein brittle-1, chloroplast precursor Length = 436 | 74 | -- | --- | 0 | -- | --- | 0 |
| bastl42e08 | 461 | BY857220 | not_full | dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 | 32 | not_full | YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III Length = 776 | 500 | -- | --- | 0 | -- | --- | 0 |
| bastl42e07 | 457 | BY857219 | not_full | ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3549 | 35 | not_full | SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100 co-activator) (100 kDa coactivator) Length = 910 | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl42e05 | 459 | BY857218 | not_full | dbj|AK102482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094L12, full insert sequence Length = 2770 | 195 | full | YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III Length = 958 | 24 | -- | --- | 0 | -- | --- | 0 |
| bastl42e04 | 364 | BY857217 | full | gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 | 70 | not_full | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 Length = 1051 | 19 | -- | --- | 0 | -- | --- | 0 |
| bastl42e03 | 416 | BY857216 | full | gb|DQ019632.1| Triticum aestivum nuclear transportin (TRN-SR) mRNA, complete cds Length = 3319 | 16 | full | TNPO3_MOUSE (Q6P2B1) Transportin 3 Length = 923 | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl42e02 | 468 | BY857215 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 77 | not_full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 27 | -- | --- | 0 | -- | --- | 0 |
| bastl42e01 | 307 | BY857214 | not_full | dbj|AB168794.1| Macaca fascicularis testis cDNA, clone: QtsA-14815, similar to human zinc finger protein 451 (ZNF451), mRNA, RefSeq: NM_015555.1 Length = 2330 | 18 | not_full | REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein) Length = 619 | 44 | -- | --- | 0 | -- | --- | 0 |
| bastl42d12 | 425 | BY857213 | not_full | ref|XM_475642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1821 | 36 | not_full | SYR_DROME (Q9VXN4) Probable arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS) Length = 665 | 23 | -- | --- | 0 | -- | --- | 0 |
| bastl42d11 | 462 | BY857212 | not_full | dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 | 26 | not_full | XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-) Length = 915 | 12 | -- | --- | 0 | -- | --- | 0 |
| bastl42d10 | 444 | BY857211 | not_full | dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 | 31 | not_full | ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding factor) (AT-binding transcription factor 1) Length = 3726 | 55 | -- | --- | 0 | -- | --- | 0 |
| bastl42d09 | 417 | BY857210 | full | gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 | 90 | not_full | LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) Length = 862 | 39 | -- | --- | 0 | -- | --- | 0 |
| bastl42d08 | 456 | BY857209 | not_full | gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 | 36 | not_full | CN104_MOUSE (Q8BPI1) Protein C14orf104 homolog Length = 328 | 6 | -- | --- | 0 | -- | --- | 0 |
| bastl42d07 | 433 | BY857208 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 38 | not_full | VG28_BPMU (Q9T1W6) Protein gp28 Length = 551 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl42d06 | 402 | BY857207 | not_full | gb|BT009347.1| Triticum aestivum clone wlm96.pk0001.b7:fis, full insert mRNA sequence Length = 2214 | 187 | not_full | AP2B1_RAT (P62944) AP-2 complex subunit beta-1 (Adapter-related protein complex 2 beta-1 subunit) (Beta-adaptin) (Plasma membrane adaptor HA2/AP2 adaptin beta subunit) (Clathrin assembly protein complex 2 beta large chain) (AP105B) Length = 937 | 51 | -- | --- | 0 | -- | --- | 0 |
| bastl42d05 | 323 | BY857206 | not_full | emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 | 62 | not_full | PATL2_ARATH (Q56ZI2) Patellin-2 Length = 683 | 11 | -- | --- | 0 | -- | --- | 0 |
| bastl42d04 | 374 | BY857205 | not_full | dbj|AK121315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113A21, full insert sequence Length = 3386 | 500 | not_full | DNBI_HCMVA (P17147) Major DNA-binding protein (MDBP) Length = 1235 | 13 | -- | --- | 0 | -- | --- | 0 |
| bastl42d03 | 259 | BY857204 | not_full | gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence Length = 226187 | 122 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl42d02 | 308 | BY857203 | not_full | dbj|AK101026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E15, full insert sequence Length = 3313 | 36 | not_full | IF2_DESVH (Q72ER1) Translation initiation factor IF-2 Length = 1079 | 69 | -- | --- | 0 | -- | --- | 0 |
| bastl42d01 | 400 | BY857202 | not_full | dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 | 143 | not_full | PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9 Length = 736 | 21 | -- | --- | 0 | -- | --- | 0 |
| bastl42c12 | 325 | BY857201 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 25 | -- | --- | 0 | -- | --- | 0 | -- | --- | 0 |
| bastl42c11 | 129 | BY857200 | not_full | emb|CR974457.17| Mouse DNA sequence from clone RP23-319E15 on chromosome 17, complete sequence Length = 124639 | 10 | not_full | C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7 precursor Length = 289 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl42c10 | 464 | BY857199 | not_full | gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 | 166 | not_full | YB1C_SCHPO (P87177) Hypothetical WD-repeat protein C3D6.12 in chromosome II Length = 922 | 312 | -- | --- | 0 | -- | --- | 0 |
| bastl42c09 | 482 | BY857198 | not_full | gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0079H11, complete sequence Length = 143925 | 75 | not_full | R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2 Length = 847 | 24 | -- | --- | 0 | -- | --- | 0 |
| bastl42c08 | 492 | BY857197 | not_full | ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 | 176 | full | AMPN_HAEIN (P45274) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) Length = 869 | 2 | -- | --- | 0 | -- | --- | 0 |
| bastl42c07 | 468 | BY857196 | not_full | ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3111 | 32 | not_full | COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP) Length = 953 | 29 | -- | --- | 0 | -- | --- | 0 |
| bastl42c06 | 486 | BY857195 | full | emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase Length = 2667 | 116 | not_full | SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 1) Length = 807 | 67 | -- | --- | 0 | -- | --- | 0 |
| bastl42c05 | 312 | BY857194 | full | gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 | 122 | not_full | IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34 (eIF-(iso)4F p82-34) Length = 788 | 9 | -- | --- | 0 | -- | --- | 0 |
| bastl42c04 | 473 | BY857193 | full | ref|XM_474123.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2751 | 26 | not_full | KINH_SYNRA (O43093) Kinesin heavy chain (Synkin) Length = 935 | 16 | -- | --- | 0 | -- | --- | 0 |
| bastl42c03 | 258 | BY857192 | not_full | gb|AC121810.3| Mus musculus BAC clone RP23-453G13 from chromosome 1, complete sequence Length = 208102 | 3 | not_full | PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Cadherin-19) (Fibroblast cadherin 1) Length = 3298 | 8 | -- | --- | 0 | -- | --- | 0 |
| bastl42c02 | 229 | BY857191 | full | gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 | 4 | not_full | PDE2A_HUMAN (O00408) cGMP-dependent 3NULL,5NULL-cyclic phosphodiesterase (EC 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) Length = 941 | 5 | -- | --- | 0 | -- | --- | 0 |
| bastl42c01 | 429 | BY857190 | full | ref|XM_476019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3273 | 76 | not_full | DDB1A_ARATH (Q9M0V3) DNA damage binding protein 1a (UV-damaged DNA-binding protein 1a) (DDB1a) Length = 1088 | 30 | -- | --- | 0 | -- | --- | 0 |
