ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
2dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
3dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
4dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
6emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 103 5e-19
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
8dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
9dbj|AK063736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
10dbj|D85517.1| Mesocricetus auratus gene for chymase 1, complete cds 44 0.37
11gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson U... 42 1.5
12gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson U... 42 1.5
13ref|NM_020248.2| Homo sapiens catenin, beta interacting protein ... 42 1.5
14ref|NM_001012329.1| Homo sapiens catenin, beta interacting prote... 42 1.5
15emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chr... 42 1.5
16emb|X79328.1|RNCABP1 R.norvegicus (Wistar) CaBP1 mRNA 42 1.5
17emb|CR606136.1| full-length cDNA clone CS0DD003YG21 of Neuroblas... 42 1.5
18ref|NM_001039430.1| Tribolium castaneum abdominal-B (abd-B), mRNA 42 1.5
19ref|XM_576132.1| PREDICTED: Rattus norvegicus thioredoxin domain... 42 1.5
20gb|AF227923.1|AF227923 Tribolium castaneum abdominal-B mRNA, com... 42 1.5
21gb|BC082063.1| Rattus norvegicus protein disulfide isomerase ass... 42 1.5
22ref|NM_001004442.1| Rattus norvegicus protein disulfide isomeras... 42 1.5
23dbj|AB021262.1| Homo sapiens mRNA for beta-catenin-interacting p... 42 1.5
24ref|XM_550264.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
25ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa827... 40 5.8
26gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosom... 40 5.8
27gb|BT018681.1| Zea mays clone EL01N0511F02.d mRNA sequence 40 5.8
28gb|AY022736.1| Oryza sativa microsatellite MRG5061 containing (C... 40 5.8
29gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.8
30ref|XM_414581.1| PREDICTED: Gallus gallus similar to ring finger... 40 5.8
31emb|AL160396.33| Human DNA sequence from clone RP11-569D9 on chr... 40 5.8
32emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chr... 40 5.8
33gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, com... 40 5.8
34gb|AC040904.4| Homo sapiens chromosome 17, clone RP11-619I22, co... 40 5.8
35gb|AC100860.2| Homo sapiens chromosome 8, clone RP11-128L5, comp... 40 5.8
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
38dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                            
Query: 132      ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
                |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 21695378 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 21695437

                                                                            
Query: 192      cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
                ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 21695438 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 21695497

                            
Query: 252      gtattcaagagt 263
                ||||||||||||
Sbjct: 21695498 gtattcaagagt 21695509



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 368      tgtcagcagcagctgttgagactgatgtt 396
                ||||||||||| |||||| ||||||||||
Sbjct: 21695605 tgtcagcagcaactgttgggactgatgtt 21695633



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>dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A08, full
           insert sequence
          Length = 2554

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 132 ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
           |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 245 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 304

                                                                       
Query: 192 cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
           ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 305 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 364

                       
Query: 252 gtattcaagagt 263
           ||||||||||||
Sbjct: 365 gtattcaagagt 376



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 368 tgtcagcagcagctgttgagactgatgtt 396
           ||||||||||| |||||| ||||||||||
Sbjct: 472 tgtcagcagcaactgttgggactgatgtt 500



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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
           insert sequence
          Length = 3861

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 132 ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
           |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 238 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 297

                                                                       
Query: 192 cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
           ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 298 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 357

                       
Query: 252 gtattcaagagt 263
           ||||||||||||
Sbjct: 358 gtattcaagagt 369



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 368 tgtcagcagcagctgttgagactgatgtt 396
           ||||||||||| |||||| ||||||||||
Sbjct: 465 tgtcagcagcaactgttgggactgatgtt 493



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>dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037H04, full
           insert sequence
          Length = 2068

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                       
Query: 132 ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
           |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 245 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 304

                                                                       
Query: 192 cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
           ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 305 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 364

                       
Query: 252 gtattcaagagt 263
           ||||||||||||
Sbjct: 365 gtattcaagagt 376



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 368 tgtcagcagcagctgttgagactgatgtt 396
           ||||||||||| |||||| ||||||||||
Sbjct: 472 tgtcagcagcaactgttgggactgatgtt 500



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Plus

                                                                            
Query: 132      ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
                |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 21623723 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 21623782

                                                                            
Query: 192      cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
                ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 21623783 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 21623842

                            
Query: 252      gtattcaagagt 263
                ||||||||||||
Sbjct: 21623843 gtattcaagagt 21623854



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 368      tgtcagcagcagctgttgagactgatgtt 396
                ||||||||||| |||||| ||||||||||
Sbjct: 21623950 tgtcagcagcaactgttgggactgatgtt 21623978



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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  103 bits (52), Expect = 5e-19
 Identities = 112/132 (84%)
 Strand = Plus / Minus

                                                                          
Query: 132    ccctgaattcagcatgacgccggtggttcattgctctgttggcaccatcagcctgttcca 191
              |||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||
Sbjct: 117173 ccctaaattcaaaatgaccccggtggttcattgctctgttggcaatatcagcctgttcca 117114

                                                                          
Query: 192    cataggcagcctcaggcccggccgagaaatacagataagaaggttccgtggttcagagag 251
              ||| |||||  |||||||  |||  ||||| || ||||| ||||||||  |  |||||||
Sbjct: 117113 catcggcagtttcaggccaagccatgaaatccaaataaggaggttccgcagcacagagag 117054

                          
Query: 252    gtattcaagagt 263
              ||||||||||||
Sbjct: 117053 gtattcaagagt 117042



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 368    tgtcagcagcagctgttgagactgatgtt 396
              ||||||||||| |||||| ||||||||||
Sbjct: 116946 tgtcagcagcaactgttgggactgatgtt 116918



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 70       ccgcgggagctcgccgtcgccc 91
                ||||||||||||||||||||||
Sbjct: 16855236 ccgcgggagctcgccgtcgccc 16855257



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>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 70    ccgcgggagctcgccgtcgccc 91
             ||||||||||||||||||||||
Sbjct: 52927 ccgcgggagctcgccgtcgccc 52948



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>dbj|AK063736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F03, full
           insert sequence
          Length = 535

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 70  ccgcgggagctcgccgtcgccc 91
           ||||||||||||||||||||||
Sbjct: 127 ccgcgggagctcgccgtcgccc 148



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>dbj|D85517.1| Mesocricetus auratus gene for chymase 1, complete cds
          Length = 3888

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 284  ggctgctgcagccacagacacc 305
            ||||||||||||||||||||||
Sbjct: 3865 ggctgctgcagccacagacacc 3844



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>gb|AC153488.1| Tribolium castaneum  BAC T.cast_C24H10 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 40580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    cccagcgacccctccgcctcctcct 42
             |||||||||||||||| ||||||||
Sbjct: 25930 cccagcgacccctccgtctcctcct 25954



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>gb|AC152927.1| Tribolium castaneum  BAC T.cast_C19N19 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 137018

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    cccagcgacccctccgcctcctcct 42
             |||||||||||||||| ||||||||
Sbjct: 27876 cccagcgacccctccgtctcctcct 27852



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>ref|NM_020248.2| Homo sapiens catenin, beta interacting protein 1 (CTNNBIP1),
            transcript variant 1, mRNA
          Length = 2995

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  tggcaccatcagcctgttcca 191
            |||||||||||||||||||||
Sbjct: 2405 tggcaccatcagcctgttcca 2425



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>ref|NM_001012329.1| Homo sapiens catenin, beta interacting protein 1 (CTNNBIP1),
            transcript variant 2, mRNA
          Length = 2961

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  tggcaccatcagcctgttcca 191
            |||||||||||||||||||||
Sbjct: 2371 tggcaccatcagcctgttcca 2391



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>emb|AL357140.33| Human DNA sequence from clone RP11-84A14 on chromosome 1 Contains the
             5' end of the CLSTN1 gene for calsyntenin 1, the CTNNBIP1
             gene for catenin, beta interacting protein 1, two novel
             genes, the LZIC gene for leucine zipper and CTNNBIP1
             domain containing, the 5' end of the NMNAT1 gene for
             nicotinamide nucleotide adenylyltransferase 1 and a CpG
             island, complete sequence
          Length = 177470

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   tggcaccatcagcctgttcca 191
             |||||||||||||||||||||
Sbjct: 53733 tggcaccatcagcctgttcca 53713



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>emb|X79328.1|RNCABP1 R.norvegicus (Wistar) CaBP1 mRNA
          Length = 1296

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 atgggctgctgcagccacaga 301
           |||||||||||||||||||||
Sbjct: 570 atgggctgctgcagccacaga 590



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>emb|CR606136.1| full-length cDNA clone CS0DD003YG21 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 946

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 tggcaccatcagcctgttcca 191
           |||||||||||||||||||||
Sbjct: 376 tggcaccatcagcctgttcca 396



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>ref|NM_001039430.1| Tribolium castaneum abdominal-B (abd-B), mRNA
          Length = 2683

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 18  cccagcgacccctccgcctcctcct 42
           |||||||||||||||| ||||||||
Sbjct: 539 cccagcgacccctccgtctcctcct 563



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>ref|XM_576132.1| PREDICTED: Rattus norvegicus thioredoxin domain containing 7
           (Txndc7), mRNA
          Length = 2122

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 atgggctgctgcagccacaga 301
           |||||||||||||||||||||
Sbjct: 641 atgggctgctgcagccacaga 661



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>gb|AF227923.1|AF227923 Tribolium castaneum abdominal-B mRNA, complete cds
          Length = 2683

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 18  cccagcgacccctccgcctcctcct 42
           |||||||||||||||| ||||||||
Sbjct: 539 cccagcgacccctccgtctcctcct 563



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>gb|BC082063.1| Rattus norvegicus protein disulfide isomerase associated 6, mRNA
           (cDNA clone MGC:95222 IMAGE:7132589), complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 atgggctgctgcagccacaga 301
           |||||||||||||||||||||
Sbjct: 630 atgggctgctgcagccacaga 650



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>ref|NM_001004442.1| Rattus norvegicus protein disulfide isomerase associated 6 (Pdia6),
           mRNA
          Length = 1744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 atgggctgctgcagccacaga 301
           |||||||||||||||||||||
Sbjct: 630 atgggctgctgcagccacaga 650



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>dbj|AB021262.1| Homo sapiens mRNA for beta-catenin-interacting protein ICAT, complete
            cds
          Length = 2980

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  tggcaccatcagcctgttcca 191
            |||||||||||||||||||||
Sbjct: 2371 tggcaccatcagcctgttcca 2391



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>ref|XM_550264.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 20  cagcgacccctccgcctcctcctc 43
           ||||||||||||| ||||||||||
Sbjct: 207 cagcgacccctcctcctcctcctc 184



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>ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa8272 predicted mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 20  cagcgacccctccgcctcctcctc 43
           ||||||||||||| ||||||||||
Sbjct: 538 cagcgacccctcctcctcctcctc 515



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>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete
             sequence
          Length = 212576

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   ccacagacaccattccacct 314
             ||||||||||||||||||||
Sbjct: 66073 ccacagacaccattccacct 66092



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>gb|BT018681.1| Zea mays clone EL01N0511F02.d mRNA sequence
          Length = 1696

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 26 cccctccgcctcctcctcagcgctccct 53
          ||||||| ||||||||||| ||||||||
Sbjct: 57 cccctcctcctcctcctcatcgctccct 30



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>gb|AY022736.1| Oryza sativa microsatellite MRG5061 containing (CCT)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 20  cagcgacccctccgcctcctcctc 43
           ||||||||||||| ||||||||||
Sbjct: 93  cagcgacccctcctcctcctcctc 116



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      gcgggagctcgccgtcgccc 91
               ||||||||||||||||||||
Sbjct: 1694630 gcgggagctcgccgtcgccc 1694611



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>ref|XM_414581.1| PREDICTED: Gallus gallus similar to ring finger protein 127
            (LOC416263), mRNA
          Length = 3615

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   cagcgacccctccgcctcctcctc 43
            |||||||||||||||||| |||||
Sbjct: 1797 cagcgacccctccgcctcatcctc 1820



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>emb|AL160396.33| Human DNA sequence from clone RP11-569D9 on chromosome 13 Contains the
             CDC16 gene for CDC16 cell division cycle 16 homolog (S.
             cerevisiae), the gene for similar to yeast Upf3, variant A
             (UPF3A, HUPF3A, RENT3A), a Charot-Leyden crystal protein
             (CLC) pseudogene,  the 5' end of the gene for a novel
             protein (KIAA1802) and 6 CpG islands, complete sequence
          Length = 172437

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gctccctctcctcaccacgg 66
             ||||||||||||||||||||
Sbjct: 19612 gctccctctcctcaccacgg 19631



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>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3'
              end of the PDCD4 gene for programmed cell death 4
              (neoplastic transformation inhibitor)(H731, MGC33046,
              MGC33047), a novel gene (LOC92482), the SHOC2 gene for
              soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8,
              SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a
              pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic,
              alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR,
              ZNF32, ADRA2R) and two CpG islands, complete sequence
          Length = 204908

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    caaaagaagctggtcctctgccaa 350
              |||||||| |||||||||||||||
Sbjct: 135791 caaaagaatctggtcctctgccaa 135768



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>gb|AC040970.7| Homo sapiens chromosome 8, clone RP11-809O17, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   cagccacagacaccattcca 311
             ||||||||||||||||||||
Sbjct: 19300 cagccacagacaccattcca 19281



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>gb|AC040904.4| Homo sapiens chromosome 17, clone RP11-619I22, complete sequence
          Length = 173651

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     ccctccgcctcctcctcagc 46
              ||||||||||||||||||||
Sbjct: 123299 ccctccgcctcctcctcagc 123280



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>gb|AC100860.2| Homo sapiens chromosome 8, clone RP11-128L5, complete sequence
          Length = 181610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   cagccacagacaccattcca 311
             ||||||||||||||||||||
Sbjct: 34638 cagccacagacaccattcca 34657



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 20      cagcgacccctccgcctcctcctc 43
               ||||||||||||| ||||||||||
Sbjct: 7526435 cagcgacccctcctcctcctcctc 7526458



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      cagcgacccctccgcctcctcctc 43
               ||||||||||||| ||||||||||
Sbjct: 3574225 cagcgacccctcctcctcctcctc 3574202



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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    cagcgacccctccgcctcctcctc 43
             ||||||||||||| ||||||||||
Sbjct: 75227 cagcgacccctcctcctcctcctc 75250



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>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1276_B06
          Length = 175174

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     cagcgacccctccgcctcctcctc 43
              ||||||||||||| ||||||||||
Sbjct: 142293 cagcgacccctcctcctcctcctc 142270


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,084,949
Number of Sequences: 3902068
Number of extensions: 4084949
Number of successful extensions: 86659
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86300
Number of HSP's gapped (non-prelim): 359
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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