ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42g04 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 155 bits (391), Expect = 5e-38 Identities = 76/95 (80%), Positives = 82/95 (86%) Frame = +1 Query: 133 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPF 312 M + G DRLTG+NKEAWKEG+IRGTAVLVK DVL LGDFHASLLDGVH ILG +GV F Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 313 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTA 417 RLVSATA DP NG RGK+GKPAHLEE+VVTMKSTA Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTA 95
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 88.2 bits (217), Expect = 7e-18 Identities = 47/93 (50%), Positives = 65/93 (69%) Frame = +1 Query: 133 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPF 312 MLL GL+D LTG NK A +++GT VL++ +VLDL DF A+++DG+ + LGK GV Sbjct: 1 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGK--GVTC 54 Query: 313 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKS 411 +L+S+TA D NG RGKVG A LE+ V ++ S Sbjct: 55 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPS 87
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 80.9 bits (198), Expect = 1e-15 Identities = 40/89 (44%), Positives = 65/89 (73%) Frame = +1 Query: 136 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFR 315 +L G++D +TG +K++ +++GT VL++ +VLDL DF A+++DG+ + LGK GV + Sbjct: 1 MLGGIIDTITGSSKQS----RLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGK--GVTCQ 54 Query: 316 LVSATAPDPQNGSRGKVGKPAHLEEMVVT 402 L+S+TA DP NG+RGKVG A LE+ + + Sbjct: 55 LISSTAVDPNNGNRGKVGAEASLEQWLTS 83
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 79.0 bits (193), Expect = 4e-15 Identities = 42/88 (47%), Positives = 58/88 (65%) Frame = +1 Query: 148 LVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFRLVSA 327 L D LTG E + K++GT VL+K +VLD DF+AS LD +H+ LG + RLVS+ Sbjct: 5 LRDLLTGGGNETTTK-KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNK--ITLRLVSS 61 Query: 328 TAPDPQNGSRGKVGKPAHLEEMVVTMKS 411 D +NGS+GK+GK AHLE+ + T+ S Sbjct: 62 DVTDSENGSKGKLGKAAHLEDWITTITS 89
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/92 (38%), Positives = 61/92 (66%) Frame = +1 Query: 136 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFR 315 +L G++ LTG K +++G+ VL++ + LD+ DF A+++DG+ + LG+ GV + Sbjct: 1 MLGGIIGGLTGN-----KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGR--GVTCQ 53 Query: 316 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKS 411 LVS++ DP NG+RG+VG A LE+ + ++ S Sbjct: 54 LVSSSLVDPNNGNRGRVGTEASLEQWLTSLPS 85
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 69.7 bits (169), Expect = 3e-12 Identities = 42/94 (44%), Positives = 57/94 (60%) Frame = +1 Query: 136 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFR 315 +L GL D+LTGKN KI+G AVL+ +LD DF ASLLD VH++ G + + + Sbjct: 1 MLGGLKDKLTGKNGN-----KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG--NSITCQ 53 Query: 316 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTA 417 LVSAT D N RG VG A+LE+ + + S + Sbjct: 54 LVSATVADQNNEGRGIVGSEANLEQGLTDLPSVS 87
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 58.5 bits (140), Expect = 6e-09 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +1 Query: 136 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFR 315 +L LV L G + ++ K++GT V++K + LD D SL D + + LG+ V F+ Sbjct: 1 MLGQLVGGLIGGHHDS---KKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQK--VSFQ 55 Query: 316 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTA 417 L+S+ DP NG +GK PA+LE ++T+ A Sbjct: 56 LISSVQSDPANGLQGKHSNPAYLENFLLTLTPLA 89
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/70 (38%), Positives = 42/70 (60%) Frame = +1 Query: 196 KIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFRLVSATAPDPQNGSRGKVGKP 375 K++GT V++ +VLD D SL + +LG+ V F+L+S+ DP NG +GK P Sbjct: 18 KVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQK--VSFQLISSVQGDPTNGLQGKHSNP 75 Query: 376 AHLEEMVVTM 405 A+LE + T+ Sbjct: 76 AYLENSLFTL 85
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 49.7 bits (117), Expect = 3e-06 Identities = 30/85 (35%), Positives = 50/85 (58%) Frame = +1 Query: 133 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPF 312 M L G+VD + GK+ K++G +L+K +VLD + AS++DG+ +LG+ V Sbjct: 1 MSLGGIVDAILGKDDRP----KVKGRVILMKKNVLDFINIGASVVDGISDLLGQK--VSI 54 Query: 313 RLVSATAPDPQNGSRGKVGKPAHLE 387 +L+S + +G GK+ PA+LE Sbjct: 55 QLISGSV--NYDGLEGKLSNPAYLE 77
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 41.2 bits (95), Expect = 0.001 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 18/91 (19%) Frame = +1 Query: 187 KEGKIRGTAVLVKSDVLDL--------GDFH----------ASLLDGVHKILGKDDGVPF 312 K KIRGT VL++ +VLD G+ H S LDG+ LG+ V Sbjct: 11 KGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGR--SVSL 68 Query: 313 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTM 405 +L+SAT D NG +GKVGK LE ++ ++ Sbjct: 69 QLISATKSD-ANG-KGKVGKDTFLEGVLASL 97
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 40.0 bits (92), Expect = 0.002 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 13/83 (15%) Frame = +1 Query: 196 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILGKDDGVPFRLVSATAP 336 KI+GT VL++ +VLD+ D S +D + LG+ V +L+SAT P Sbjct: 14 KIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGR--SVSLQLISATKP 71 Query: 337 DPQNGSRGKVGKPAHLEEMVVTM 405 D +GK+GK LE ++ ++ Sbjct: 72 DAT--GKGKLGKATFLEGIISSL 92
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 37.0 bits (84), Expect = 0.018 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 18/88 (20%) Frame = +1 Query: 196 KIRGTAVLVKSDVLDLGDFH------------------ASLLDGVHKILGKDDGVPFRLV 321 KI+GT VL++ +VLD S LD + LG+ V +L+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRS--VALQLI 75 Query: 322 SATAPDPQNGSRGKVGKPAHLEEMVVTM 405 SAT P NG +GKVGK LE ++V++ Sbjct: 76 SATKP-LANG-KGKVGKDTFLEGIIVSL 101
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 35.8 bits (81), Expect = 0.041 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 20/90 (22%) Frame = +1 Query: 196 KIRGTAVLVKSDVLDL--------------------GDFHASLLDGVHKILGKDDGVPFR 315 K++GT +L++ +VLD+ G S++D LG+ V R Sbjct: 11 KLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGR--SVRLR 68 Query: 316 LVSATAPDPQNGSRGKVGKPAHLEEMVVTM 405 L+SAT D +GKV K A LE ++ ++ Sbjct: 69 LISATVADA--SGKGKVSKEAFLEGLLTSI 96
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 35.4 bits (80), Expect = 0.054 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 13/83 (15%) Frame = +1 Query: 196 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILGKDDGVPFRLVSATAP 336 KI+GT VL++ +VL + D S LD + LG+ V +L+SAT Sbjct: 11 KIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRP--VSLQLISATKA 68 Query: 337 DPQNGSRGKVGKPAHLEEMVVTM 405 D NG +GK+GK LE ++ ++ Sbjct: 69 DA-NG-KGKLGKATFLEGIITSL 89
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 32.0 bits (71), Expect = 0.59 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 20/93 (21%) Frame = +1 Query: 187 KEGKIRGTAVLVKSDVLDLGDF----HASLLDGVHKILGK----------------DDGV 306 K KI+GT VL+ +VLD ++D ILG+ + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 307 PFRLVSATAPDPQNGSRGKVGKPAHLEEMVVTM 405 +L+SAT D GKVGK +LE+ + T+ Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKHLPTL 97
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 31.2 bits (69), Expect = 1.0 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 10/76 (13%) Frame = +1 Query: 187 KEGKIRGTAVLVKSDVLDLGDFHA--SLLD-GVHKILGKDDGVPF-------RLVSATAP 336 K KI+GT V+++ +VLD+ + ++D G+ I D + F +L+SAT Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAATKISIQLISATKA 66 Query: 337 DPQNGSRGKVGKPAHL 384 D G +GK+GK +L Sbjct: 67 D---GGKGKIGKSTNL 79
>OXAA_SALTY (Q8ZKY4) Inner membrane protein oxaA| Length = 548 Score = 30.8 bits (68), Expect = 1.3 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%) Frame = +1 Query: 202 RGTAVLVKSDVLDL------GDFHASLLDGVHKILGKDDGVPFRLVSATAP---DPQNGS 354 +G + VK+DVLDL GD +LL K LG ++ PF+L+ T Q+G Sbjct: 57 QGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE--PFQLLETTPQFIYQAQSGL 114 Query: 355 RGKVG 369 G+ G Sbjct: 115 TGRDG 119
>OXAA_SALTI (Q8Z2N7) Inner membrane protein oxaA| Length = 548 Score = 30.8 bits (68), Expect = 1.3 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%) Frame = +1 Query: 202 RGTAVLVKSDVLDL------GDFHASLLDGVHKILGKDDGVPFRLVSATAP---DPQNGS 354 +G + VK+DVLDL GD +LL K LG ++ PF+L+ T Q+G Sbjct: 57 QGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE--PFQLLETTPQFIYQAQSGL 114 Query: 355 RGKVG 369 G+ G Sbjct: 115 TGRDG 119
>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)| Length = 504 Score = 30.4 bits (67), Expect = 1.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 13 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 144 H CP CAKC ++ + TH R + PC C +R ++ H Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416
>AT132_MOUSE (Q9CTG6) Probable cation-transporting ATPase 13A2 (EC 3.6.3.-)| Length = 1169 Score = 30.4 bits (67), Expect = 1.7 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%) Frame = -3 Query: 416 AVDFIVTTISS-----RCAGFPTLPRLPFCG---SGAVALTRRKGTPSSLPRIL 279 A++F+ T S+ + G+PT+P FC SG+ RK P LP++L Sbjct: 781 ALEFLPTESSAVMNGAKATGYPTVPEPQFCHLALSGSTFAVLRKHFPKLLPKVL 834
>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN| domain-containing protein 19) Length = 518 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +1 Query: 13 HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 144 H CP C KC S+ TG R+ S C C R R ++ H Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369
>IF2P_ARCFU (O29490) Probable translation initiation factor IF-2| Length = 595 Score = 29.6 bits (65), Expect = 2.9 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Frame = +1 Query: 133 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLG-DFHASLLDGVHK------ILG 291 ++L GL R KN EGK RGT + VK + LG A L DG K I G Sbjct: 215 LILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEE-RGLGVTCDAILYDGTLKVGDRIAIAG 273 Query: 292 KDDGVPFRLVSATAPDP 342 KD+ + + + P P Sbjct: 274 KDEVIVTNVKAILKPPP 290
>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)| Length = 512 Score = 29.3 bits (64), Expect = 3.8 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 13 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 144 H CP C+KC ++ + TH R + PC C +R ++ H Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424
>TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 258 Score = 29.3 bits (64), Expect = 3.8 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 2/113 (1%) Frame = +1 Query: 4 PYHHHCPPCAKCISKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLHG--LVDRLTGKNK 177 PY H + + GTH S CSA + R R R E+ G L R G Sbjct: 134 PYSLHISAMNEALRLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKADGPMLEFRFVG--- 190 Query: 178 EAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVPFRLVSATAP 336 G + ++ VL++G S D + KD RL TAP Sbjct: 191 ----SGFLYNMVRIIVGTVLEIGQGKRSPADISTLLAAKDR----RLAGPTAP 235
>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)| Length = 482 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +1 Query: 19 CPPCAKCISKGTGTHRLCSSCSALPCLRCR 108 CP C CI K G C+ + C RCR Sbjct: 287 CPQCHSCIEKAGG-------CNHIQCTRCR 309
>UVRA_BRUSU (Q8G0I9) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 66 PVGACPLADALGTRRAV 16 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUME (Q8YHC4) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 66 PVGACPLADALGTRRAV 16 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUAB (P0C0Z2) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 66 PVGACPLADALGTRRAV 16 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>UVRA_BRUA2 (Q2YPX5) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 974 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 66 PVGACPLADALGTRRAV 16 P GACP D LGT++A+ Sbjct: 294 PFGACPTCDGLGTQQAI 310
>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa| helicase (EC 3.6.1.-) Length = 2142 Score = 28.1 bits (61), Expect = 8.6 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +1 Query: 100 RCRTREQRRGEMLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVH 279 R R RE+ RG L ++ +L E +EG+ RG+ K D D G A + GV Sbjct: 348 RQRIREKMRGNSALAKILRQLDTGKSEDQEEGEARGSK-RGKGDAEDGGAAAAGQVAGVR 406 Query: 280 KIL 288 ++L Sbjct: 407 QLL 409
>SUHW_DROVI (Q08876) Protein suppressor of hairy wing| Length = 899 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Frame = +1 Query: 10 HHHCPPCAKCISKGTGTHRLCS-----SCSALPCLRCRTREQRRGEMLLHGLVDRLTGK 171 H +CP C K T R SC+ PC C + + + LH +L GK Sbjct: 287 HINCPDCPKSFKTQTSYERHIFITHSWSCNDYPCSICNAKLRSGALLKLHEQQHQLRGK 345
>MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)| [Contains: Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)] Length = 58 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = +1 Query: 19 CPPCAKCISKGTGTHR-LCSSCSALPCLRC 105 CPPC KC S+ T + CS + PC C Sbjct: 28 CPPCDKCSSECKCTSKEECSKTCSKPCSCC 57
>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Salt-inducible kinase 2) Length = 931 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = +3 Query: 9 PPPLPSLCQVHQQGDRHPP 65 PPPLPS Q HQQ PP Sbjct: 811 PPPLPSQLQQHQQPPPPPP 829
>UVRA_RHILO (Q98M36) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 973 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 66 PVGACPLADALGTRRAV 16 P GACP D LG++RA+ Sbjct: 293 PFGACPTCDGLGSQRAI 309
>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)| (UbcM4-interacting protein 48) Length = 492 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%) Frame = +1 Query: 19 CPPCAKCISKGTG-THRLCSSCSALPCLRC 105 CP C CI K G H CS C C C Sbjct: 296 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325
>ADA22_XENLA (O42596) ADAM 22 precursor (A disintegrin and metalloproteinase| domain 22) (Metalloprotease-disintegrin MDC11b) (MDC11.2) Length = 935 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 5/44 (11%) Frame = +1 Query: 277 HKILGKDDGVPFRLVSATAPDPQN-----GSRGKVGKPAHLEEM 393 + +LG +D VP RL+ + D Q +R + G P H +++ Sbjct: 42 NSVLGMEDTVPLRLIFSNEEDNQTTQGLLSTRVRAGSPQHQDQL 85
>PML_MOUSE (Q60953) Probable transcription factor PML| Length = 808 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%) Frame = +1 Query: 19 CPPC---AKCISKGTGTHRLCSSCSALPCLRC 105 CP C AKC H LCS C P L+C Sbjct: 31 CPSCQAQAKCPKLLPCLHTLCSGCLEAPGLQC 62
>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)| Length = 493 Score = 28.1 bits (61), Expect = 8.6 Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%) Frame = +1 Query: 19 CPPCAKCISKGTG-THRLCSSCSALPCLRC 105 CP C CI K G H CS C C C Sbjct: 297 CPKCNICIEKNGGCNHMQCSKCKHDFCWMC 326 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,983,853 Number of Sequences: 219361 Number of extensions: 813088 Number of successful extensions: 3797 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3783 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
