ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl42c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474123.1| Oryza sativa (japonica cultivar-group), predic... 224 2e-55
2dbj|AK103112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
4emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 133 6e-28
5emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 133 6e-28
6emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4,... 133 6e-28
7emb|AL591430.8| Mouse DNA sequence from clone RP23-41B20 on chro... 44 0.41
8gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome ... 42 1.6
9gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence 42 1.6
10gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, comp... 42 1.6
11gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A... 42 1.6
12gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complet... 42 1.6
13emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 42 1.6
14emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 42 1.6
15gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, com... 40 6.4
16gb|AC140274.2| Mus musculus BAC clone RP23-455O6 from chromosome... 40 6.4
17gb|AC147613.2| Mus musculus BAC clone RP23-381J20 from chromosom... 40 6.4
18gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, co... 40 6.4
19emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on ch... 40 6.4
20emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chr... 40 6.4
21emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on ch... 40 6.4
22gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, comp... 40 6.4
23gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, com... 40 6.4
24gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, com... 40 6.4
25gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complet... 40 6.4
26gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 6.4 
>ref|XM_474123.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2751

 Score =  224 bits (113), Expect = 2e-55
 Identities = 276/330 (83%), Gaps = 9/330 (2%)
 Strand = Plus / Plus

                                                                       
Query: 150 ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
           |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 8   ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 67

                                                                       
Query: 210 ccaat------gataaggaacatgag---gagaagattgcacggctagagagatcactgc 260
           |||||      || | |||||| |||   ||||||||||||||| ||||||||||  |||
Sbjct: 68  ccaatatatcagagagggaacaggagaaagagaagattgcacggttagagagatccttgc 127

                                                                       
Query: 261 aaggcttaaatgaacaactttcatttgctcatgctgaatgcttcgagaaggatgctattc 320
           || |||||||||||||  ||||||||||||| ||||||||| | ||||||||||||||| 
Sbjct: 128 aatgcttaaatgaacagatttcatttgctcaagctgaatgcgtggagaaggatgctattt 187

                                                                       
Query: 321 tatccaagcaagcaaaagtagctgaagaagccatactaggctgggagaaagcagaggctg 380
           || | |||||||||||||| || |||||||| ||| |||| ||||||||||| || | ||
Sbjct: 188 tagctaagcaagcaaaagtggcagaagaagcaatattaggttgggagaaagctgaaggtg 247

                                                                       
Query: 381 aagctatagctatcaagacagaacttgatgatactctacatgagaaagccatggttgagc 440
           |||| |||||||| |||||| ||||||||||||||||| || ||||||||    ||||||
Sbjct: 248 aagcaatagctattaagacacaacttgatgatactctagatcagaaagccgcaattgagc 307

                                         
Query: 441 aaaggattcggcagcttgatgaggctctaa 470
           |||||||| | || ||||||||||||||||
Sbjct: 308 aaaggatttgccatcttgatgaggctctaa 337
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>dbj|AK103112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119E14, full
           insert sequence
          Length = 3116

 Score =  224 bits (113), Expect = 2e-55
 Identities = 276/330 (83%), Gaps = 9/330 (2%)
 Strand = Plus / Plus

                                                                       
Query: 150 ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
           |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 113 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 172

                                                                       
Query: 210 ccaat------gataaggaacatgag---gagaagattgcacggctagagagatcactgc 260
           |||||      || | |||||| |||   ||||||||||||||| ||||||||||  |||
Sbjct: 173 ccaatatatcagagagggaacaggagaaagagaagattgcacggttagagagatccttgc 232

                                                                       
Query: 261 aaggcttaaatgaacaactttcatttgctcatgctgaatgcttcgagaaggatgctattc 320
           || |||||||||||||  ||||||||||||| ||||||||| | ||||||||||||||| 
Sbjct: 233 aatgcttaaatgaacagatttcatttgctcaagctgaatgcgtggagaaggatgctattt 292

                                                                       
Query: 321 tatccaagcaagcaaaagtagctgaagaagccatactaggctgggagaaagcagaggctg 380
           || | |||||||||||||| || |||||||| ||| |||| ||||||||||| || | ||
Sbjct: 293 tagctaagcaagcaaaagtggcagaagaagcaatattaggttgggagaaagctgaaggtg 352

                                                                       
Query: 381 aagctatagctatcaagacagaacttgatgatactctacatgagaaagccatggttgagc 440
           |||| |||||||| |||||| ||||||||||||||||| || ||||||||    ||||||
Sbjct: 353 aagcaatagctattaagacacaacttgatgatactctagatcagaaagccgcaattgagc 412

                                         
Query: 441 aaaggattcggcagcttgatgaggctctaa 470
           |||||||| | || ||||||||||||||||
Sbjct: 413 aaaggatttgccatcttgatgaggctctaa 442
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  133 bits (67), Expect = 6e-28
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 230      gagaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgct 289
                ||||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||
Sbjct: 33116671 gagaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgct 33116730

                                                                            
Query: 290      catgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaa 349
                || ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||
Sbjct: 33116731 caagctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaa 33116790

                           
Query: 350      gccatactagg 360
                || ||| ||||
Sbjct: 33116791 gcaatattagg 33116801



 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                            
Query: 356      ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 415
                ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 33116977 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 33117036

                                                                       
Query: 416      ctacatgagaaagccatggttgagcaaaggattcggcagcttgatgaggctctaa 470
                ||| || ||||||||    |||||||||||||| | || ||||||||||||||||
Sbjct: 33117037 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaa 33117091



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 150      ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
                |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 33116493 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 33116552

                     
Query: 210      ccaat 214
                |||||
Sbjct: 33116553 ccaat 33116557
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>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
            sequence
          Length = 118971

 Score =  133 bits (67), Expect = 6e-28
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                        
Query: 230  gagaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgct 289
            ||||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||
Sbjct: 7502 gagaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgct 7561

                                                                        
Query: 290  catgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaa 349
            || ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||
Sbjct: 7562 caagctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcggaagaa 7621

                       
Query: 350  gccatactagg 360
            || ||| ||||
Sbjct: 7622 gcaatattagg 7632



 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                        
Query: 356  ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 415
            ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 7808 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 7867

                                                                   
Query: 416  ctacatgagaaagccatggttgagcaaaggattcggcagcttgatgaggctctaa 470
            ||| || ||||||||    |||||||||||||| | || ||||||||||||||||
Sbjct: 7868 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaa 7922



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 150  ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
            |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 7324 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 7383

                 
Query: 210  ccaat 214
            |||||
Sbjct: 7384 ccaat 7388
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>emb|AL732335.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0721B11, complete
             sequence
          Length = 43586

 Score =  133 bits (67), Expect = 6e-28
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 230   gagaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgct 289
             ||||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||
Sbjct: 41328 gagaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgct 41387

                                                                         
Query: 290   catgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaa 349
             || ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||
Sbjct: 41388 caagctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcggaagaa 41447

                        
Query: 350   gccatactagg 360
             || ||| ||||
Sbjct: 41448 gcaatattagg 41458



 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                         
Query: 356   ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 415
             ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 41634 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 41693

                                                                    
Query: 416   ctacatgagaaagccatggttgagcaaaggattcggcagcttgatgaggctctaa 470
             ||| || ||||||||    |||||||||||||| | || ||||||||||||||||
Sbjct: 41694 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaa 41748



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 150   ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
             |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 41150 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 41209

                  
Query: 210   ccaat 214
             |||||
Sbjct: 41210 ccaat 41214
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>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21,
              complete sequence
          Length = 140626

 Score =  133 bits (67), Expect = 6e-28
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                          
Query: 230    gagaagattgcacggctagagagatcactgcaaggcttaaatgaacaactttcatttgct 289
              ||||||||||||||| ||||||||||  ||||| |||||||||||||  |||||||||||
Sbjct: 126252 gagaagattgcacggttagagagatccttgcaatgcttaaatgaacagatttcatttgct 126311

                                                                          
Query: 290    catgctgaatgcttcgagaaggatgctattctatccaagcaagcaaaagtagctgaagaa 349
              || ||||||||| | ||||||||||||||| || | |||||||||||||| || ||||||
Sbjct: 126312 caagctgaatgcgtggagaaggatgctattttagctaagcaagcaaaagtggcagaagaa 126371

                         
Query: 350    gccatactagg 360
              || ||| ||||
Sbjct: 126372 gcaatattagg 126382



 Score =  101 bits (51), Expect = 2e-18
 Identities = 99/115 (86%)
 Strand = Plus / Plus

                                                                          
Query: 356    ctaggctgggagaaagcagaggctgaagctatagctatcaagacagaacttgatgatact 415
              ||||| ||||||||||| || | |||||| |||||||| |||||| ||||||||||||||
Sbjct: 126558 ctaggttgggagaaagctgaaggtgaagcaatagctattaagacacaacttgatgatact 126617

                                                                     
Query: 416    ctacatgagaaagccatggttgagcaaaggattcggcagcttgatgaggctctaa 470
              ||| || ||||||||    |||||||||||||| | || ||||||||||||||||
Sbjct: 126618 ctagatcagaaagccgcaattgagcaaaggatttgccatcttgatgaggctctaa 126672



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                          
Query: 150    ataaaacatggctttggagaaagaaagcatcggaaagggcagtttcagtaaagaacaaac 209
              |||||||||||||||||||||| ||| | || |||||| || |||||   ||||||||| 
Sbjct: 126074 ataaaacatggctttggagaaaaaaatcctcagaaaggacaatttcaacgaagaacaaag 126133

                   
Query: 210    ccaat 214
              |||||
Sbjct: 126134 ccaat 126138
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>emb|AL591430.8| Mouse DNA sequence from clone RP23-41B20 on chromosome 2 Contains the
             5' end of the Cdh22 gene for cadherin 22, the Ovcov1 gene
             for ovarian cancer overexpressed 1, the Elmo2 gene for
             engulfment and cell motility 2, ced-12 homolog (C.
             elegans), the 3' end of a putative novel zinc finger
             protein and three CpG islands, complete sequence
          Length = 144243

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 4     cacagagtcacaggtgagtgac 25
             ||||||||||||||||||||||
Sbjct: 83802 cacagagtcacaggtgagtgac 83823
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>gb|AC123067.4| Mus musculus BAC clone RP23-20M6 from chromosome 12, complete sequence
          Length = 200251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 153    aaacatggctttggagaaagaaagc 177
              ||||||||||||||| |||||||||
Sbjct: 162456 aaacatggctttggaaaaagaaagc 162480
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>gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence
          Length = 183671

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 426    aagccatggttgagcaaagga 446
              |||||||||||||||||||||
Sbjct: 137163 aagccatggttgagcaaagga 137143
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>gb|AC008875.9| Homo sapiens chromosome 5 clone CTD-2201E18, complete sequence
          Length = 167100

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 366    agaaagcagaggctgaagcta 386
              |||||||||||||||||||||
Sbjct: 128738 agaaagcagaggctgaagcta 128758
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>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence
          Length = 193254

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 366   agaaagcagaggctgaagcta 386
             |||||||||||||||||||||
Sbjct: 15352 agaaagcagaggctgaagcta 15372
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>gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complete sequence
          Length = 167941

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 210   ccaatgataaggaacatgaggagaa 234
             |||||||||||||| ||||||||||
Sbjct: 10118 ccaatgataaggaaaatgaggagaa 10142
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 327     agcaagcaaaagtagctgaag 347
               |||||||||||||||||||||
Sbjct: 1127473 agcaagcaaaagtagctgaag 1127493
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 327     agcaagcaaaagtagctgaag 347
               |||||||||||||||||||||
Sbjct: 1304251 agcaagcaaaagtagctgaag 1304231
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>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence
          Length = 161504

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     ggcagagccactgccattca 76
              ||||||||||||||||||||
Sbjct: 124178 ggcagagccactgccattca 124159
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>gb|AC140274.2| Mus musculus BAC clone RP23-455O6 from chromosome 7, complete sequence
          Length = 186562

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    taaatgaacaactttcattt 286
              ||||||||||||||||||||
Sbjct: 136922 taaatgaacaactttcattt 136903
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>gb|AC147613.2| Mus musculus BAC clone RP23-381J20 from chromosome 7, complete sequence
          Length = 188914

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    taaatgaacaactttcattt 286
              ||||||||||||||||||||
Sbjct: 142527 taaatgaacaactttcattt 142546
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>gb|AC112675.12| Mus musculus chromosome 1, clone RP23-138J12, complete sequence
          Length = 278715

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    gctttggagaaagaaagcat 179
              ||||||||||||||||||||
Sbjct: 219645 gctttggagaaagaaagcat 219626
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>emb|AL359956.10| Human DNA sequence from clone RP11-438H17 on chromosome X, complete
            sequence
          Length = 62570

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  ggagaaagcagaggctgaag 383
            ||||||||||||||||||||
Sbjct: 6339 ggagaaagcagaggctgaag 6320
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>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the
             TRIP7 gene for thyroid hormone receptor interactor 7, a
             ribosomal protein S18 (RPS18) pseudogene and part of a
             novel gene, complete sequence
          Length = 152086

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   cttaaatgaacaactttcat 284
             ||||||||||||||||||||
Sbjct: 25664 cttaaatgaacaactttcat 25683
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>emb|AL353691.12| Human DNA sequence from clone RP5-1174J21 on chromosome Xp11.3-21.2
             Contains part of the CASK gene for
             calcium/calmodulin-dependent serine protein kinase (MAGUK
             family) and a ribosomal protein S15a (RPS15A) pseudogene,
             complete sequence
          Length = 106605

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   ctttggagaaagaaagcatc 180
             ||||||||||||||||||||
Sbjct: 34902 ctttggagaaagaaagcatc 34921
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>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   atgatactctacatgagaaa 427
             ||||||||||||||||||||
Sbjct: 51723 atgatactctacatgagaaa 51704
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>gb|AC013652.8| Homo sapiens chromosome 15, clone RP11-462P6, complete sequence
          Length = 189761

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 218   aaggaacatgaggagaagattgca 241
             |||||||||||||||| |||||||
Sbjct: 28376 aaggaacatgaggagatgattgca 28399
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>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence
          Length = 163976

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   aaggaacatgaggagaagattgca 241
             |||||||||||||||| |||||||
Sbjct: 20371 aaggaacatgaggagatgattgca 20348
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>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence
          Length = 74521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    ggcagagccactgccattca 76
             ||||||||||||||||||||
Sbjct: 18112 ggcagagccactgccattca 18131
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 408     atgatactctacatgagaaa 427
               ||||||||||||||||||||
Sbjct: 1144346 atgatactctacatgagaaa 1144327


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,869,213
Number of Sequences: 3902068
Number of extensions: 4869213
Number of successful extensions: 94829
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94705
Number of HSP's gapped (non-prelim): 118
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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