ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl42e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 Score = 157 bits (79), Expect = 3e-35 Identities = 104/111 (93%), Gaps = 6/111 (5%) Strand = Plus / Plus Query: 231 atggcttccaaaggtgcaggaggcggcggcggc---catgaggagcctcctcagcggccg 287 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 404 atggcttccaaaggtgcaggaggcggcggcggcggccatgaggagcctc---agcggccg 460 Query: 288 aagcagcagctgccgcgcgactcccgtggctcgctcgaggtcttcaacccc 338 |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 461 aagcagcagctgccgcgcgactcccgcggctcgctcgaggtcttcaacccc 511
>gb|AF033097.1|AF033097 Avena sativa nonphototropic hypocotyl 1 (NPH1-2) mRNA, complete cds Length = 3422 Score = 117 bits (59), Expect = 3e-23 Identities = 62/63 (98%) Strand = Plus / Plus Query: 276 cctcagcggccgaagcagcagctgccgcgcgactcccgtggctcgctcgaggtcttcaac 335 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 392 cctcagcggccgaagcagcagctgccgcgcgactcccgcggctcgctcgaggtcttcaac 451 Query: 336 ccc 338 ||| Sbjct: 452 ccc 454 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 242 aggtgcaggaggcggcggcggc 263 |||||||||||||||||||||| Sbjct: 349 aggtgcaggaggcggcggcggc 370 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 atggcttccaaaggtgcagg 250 |||||||||||||||||||| Sbjct: 332 atggcttccaaaggtgcagg 351
>gb|AC116146.14| Mus musculus chromosome 7, clone RP24-168I21, complete sequence Length = 130931 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||||||||||||||| Sbjct: 48931 gaggaagaagaggagggaaggaggag 48906
>gb|AC104868.8| Mus musculus chromosome 1, clone RP24-532K6, complete sequence Length = 182376 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 ||||||||||||||||||||||||| Sbjct: 56574 gaggaagaagaggagggaaggagga 56550 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||| ||||||||||||| Sbjct: 56703 gaggaagaagagaagggaaggaggag 56678
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggagga 197 ||||||||||||||||||||||||| Sbjct: 11415 gaggaagaagaggagggaaggagga 11439
>gb|DQ286293.1| Rattus norvegicus HS1 binding protein gene, complete cds Length = 3686 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 93 taaataaataaaatatgaggaga 115 ||||||||||||||||||||||| Sbjct: 1927 taaataaataaaatatgaggaga 1905
>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0044A08 map near S6115, complete sequence Length = 158583 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gcaggaggcggcggcggccatg 267 |||||||||||||||||||||| Sbjct: 39078 gcaggaggcggcggcggccatg 39057
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062O09 map near S6115, complete sequence Length = 148654 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 gcaggaggcggcggcggccatg 267 |||||||||||||||||||||| Sbjct: 132781 gcaggaggcggcggcggccatg 132760
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||| ||||||||||| Sbjct: 25619 gaggaagaagaggaaggaaggaggag 25594
>gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 10, complete sequence Length = 219653 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||| ||||||||||| Sbjct: 11261 gaggaagaagaggaaggaaggaggag 11286
>gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, complete sequence Length = 176055 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaagga 194 |||||||||||||||||||||| Sbjct: 58908 gaggaagaagaggagggaagga 58929
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 aagaagaggagggaaggaggag 198 |||||||||||||||||||||| Sbjct: 178152 aagaagaggagggaaggaggag 178131
>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete sequence Length = 169973 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 aagaagaggagggaaggaggag 198 |||||||||||||||||||||| Sbjct: 126127 aagaagaggagggaaggaggag 126148
>gb|AC116180.4| Mus musculus BAC clone RP24-167M11 from chromosome 9, complete sequence Length = 149442 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gaagaagaggagggaaggagga 197 |||||||||||||||||||||| Sbjct: 5856 gaagaagaggagggaaggagga 5835
>gb|AC010091.2| Homo sapiens BAC clone RP11-295A1 from 7, complete sequence Length = 56864 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaagga 194 |||||||||||||||||||||| Sbjct: 6929 gaggaagaagaggagggaagga 6950
>gb|AC161195.4| Mus musculus chromosome 15, clone RP23-313M10, complete sequence Length = 166637 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 aaataaaatatgaggagatgaa 119 |||||||||||||||||||||| Sbjct: 33650 aaataaaatatgaggagatgaa 33671
>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4 Contains the 5'end of the SYN1 gene for synapsin I, the PFC gene for properdin P factor (complement), the ELK1 member of the ETS oncogene family, the UTX gene for ubiquitously-expressed transcript, an SMS (spermine synthase) pseudogene, a novel gene (LOC286403) and three CpG islands, complete sequence Length = 156601 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||| ||||||||||| Sbjct: 78906 gaggaagaagaggaaggaaggaggag 78881
>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence Length = 209458 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaagga 194 |||||||||||||||||||||| Sbjct: 128854 gaggaagaagaggagggaagga 128833
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 ||||||||||||| |||||||||||| Sbjct: 181551 gaggaagaagaggggggaaggaggag 181526
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 44.1 bits (22), Expect = 0.35 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 173 gaggaagaagaggagg-gaaggaggagtgc 201 |||||||||||||||| ||||||||||||| Sbjct: 118864 gaggaagaagaggaggagaaggaggagtgc 118893
>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the genes for two novel 7 transmembrane receptor (rhodopsin family) domain-containing proteins, a high mobility group box 1 (Hmgb1) pseudogene, the Cias1 gene for cold autoinflammatory syndrome 1 homolog (human), a novel gene (4933439C10Rik), the gene for a novel protein (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene, an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the gene for a novel zinc finger domain-containing protein, the 3' end of the gene for a novel protein and one CpG island, complete sequence Length = 157300 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggaggag 198 ||||||||||||||||||| |||||| Sbjct: 33512 gaggaagaagaggagggaaagaggag 33537
>emb|AL845255.2| Mouse DNA sequence from clone RP23-298K19 on chromosome 4 Contains a K+ channel tetramerisation domain protein pseudogene and a novel gene, complete sequence Length = 199040 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggaggag 198 ||||| |||||||||||||||||||| Sbjct: 10722 gaggaggaagaggagggaaggaggag 10747
>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete sequence Length = 400029 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||| ||||||||||| Sbjct: 41383 gaggaagaagaggaaggaaggaggag 41358
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 gcaggaggcggcggcggccatg 267 |||||||||||||||||||||| Sbjct: 12507054 gcaggaggcggcggcggccatg 12507075
>gb|AC159292.3| Mus musculus BAC clone RP23-290D9 from chromosome 10, complete sequence Length = 224627 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggaggag 198 |||||||||||||| ||||||||||| Sbjct: 188686 gaggaagaagaggaaggaaggaggag 188711
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 aaataaaatatgaggagatgaa 119 |||||||||||||||||||||| Sbjct: 120953 aaataaaatatgaggagatgaa 120974
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 gcaggaggcggcggcggccatg 267 |||||||||||||||||||||| Sbjct: 12586361 gcaggaggcggcggcggccatg 12586382
>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete sequence Length = 229171 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gaagaagaggagggaaggagga 197 |||||||||||||||||||||| Sbjct: 173968 gaagaagaggagggaaggagga 173989
>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence Length = 166132 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gaagaagaggagggaaggagga 197 |||||||||||||||||||||| Sbjct: 148872 gaagaagaggagggaaggagga 148851
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4332439 gcaacccttcttcctcttcct 4332459
>gb|AC159290.2| Mus musculus BAC clone RP23-291I2 from chromosome 13, complete sequence Length = 231853 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 agaagaggagggaaggaggag 198 ||||||||||||||||||||| Sbjct: 209205 agaagaggagggaaggaggag 209225
>ref|XM_479630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3312 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 77 gaggaagaagaggagggaagg 57
>gb|AY523572.1| Zea mays brassinosteroid biosynthesis-like protein (DWF1) mRNA, complete cds Length = 2005 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 aggtgcaggaggcggcggcggccat 266 ||||||||||||||| ||||||||| Sbjct: 1757 aggtgcaggaggcggaggcggccat 1781
>ref|XM_418479.1| PREDICTED: Gallus gallus similar to cell division cycle 25A isoform a; dual specificity phosphatase CDC25A; M-phase inducer phosphatase 1 (LOC420375), mRNA Length = 2040 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 aggtgcaggaggcggcggcgg 262 ||||||||||||||||||||| Sbjct: 290 aggtgcaggaggcggcggcgg 270
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 |||||| |||||||||||||||||| Sbjct: 131091 gaggaaaaagaggagggaaggagga 131067 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gaagaagaggagggaaggag 195 |||||||||||||||||||| Sbjct: 168610 gaagaagaggagggaaggag 168591
>gb|AC074225.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-78M3, complete sequence Length = 197412 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tgaggagatgaagagctgagg 128 ||||||||||||||||||||| Sbjct: 137078 tgaggagatgaagagctgagg 137058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gtgcaggaggcggcggcggcc 264 ||||||||||||||||||||| Sbjct: 9269907 gtgcaggaggcggcggcggcc 9269887 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 aagaagaggagggaaggagg 196 |||||||||||||||||||| Sbjct: 9382431 aagaagaggagggaaggagg 9382412
>gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome 13, complete sequence Length = 199585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 agaagaggagggaaggaggag 198 ||||||||||||||||||||| Sbjct: 25481 agaagaggagggaaggaggag 25501
>gb|AC121950.2| Mus musculus BAC clone RP24-216M19 from 6, complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 162555 gaggaagaagaggagggaagg 162575
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4789373 gcaacccttcttcctcttcct 4789353
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4506262 gcaacccttcttcctcttcct 4506242
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4255366 gcaacccttcttcctcttcct 4255346
>gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8 minutes Length = 176195 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 122585 gcaacccttcttcctcttcct 122565
>gb|AC164289.3| Mus musculus BAC clone RP23-380L19 from chromosome 6, complete sequence Length = 212908 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tgaggagatgaagagctgagg 128 ||||||||||||||||||||| Sbjct: 129769 tgaggagatgaagagctgagg 129789
>emb|AJ009972.1|ANI9972 Aspergillus niger pyc gene Length = 6513 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 aggaagaagaggagggaaggaggag 198 |||||||||||| |||||||||||| Sbjct: 1448 aggaagaagaggggggaaggaggag 1424
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 aaaatatgaggagatgaagag 122 ||||||||||||||||||||| Sbjct: 50254 aaaatatgaggagatgaagag 50234
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4260933 gcaacccttcttcctcttcct 4260913
>gb|AC019026.12| Mus musculus chromosome 6 clone RP23-188E5 strain C57BL6/J, complete sequence Length = 157996 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 86342 gaggaagaagaggagggaagg 86362
>gb|AC095055.3| Homo sapiens BAC clone RP11-372K14 from 4, complete sequence Length = 183478 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 taaataaataaaatatgagga 113 ||||||||||||||||||||| Sbjct: 10437 taaataaataaaatatgagga 10457
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggcc 264 ||||||||||||||||||||| Sbjct: 16484 gtgcaggaggcggcggcggcc 16504
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 ggaggcggcggcggccatgaggagc 273 |||||||||||||||| |||||||| Sbjct: 64537 ggaggcggcggcggccttgaggagc 64561
>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete sequence Length = 216718 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggaggag 198 ||||||||||||| ||||||||||| Sbjct: 172269 aggaagaagaggaaggaaggaggag 172293
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 ||||||||||||||||| ||||||| Sbjct: 44654 gaggaagaagaggaggggaggagga 44630
>dbj|AK037681.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130036O06 product:unclassifiable, full insert sequence Length = 2376 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 ||||||||||||||||| ||||||| Sbjct: 255 gaggaagaagaggaggggaggagga 231
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 29563202 gaggaagaagaggagggaagg 29563182 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 28204910 aggaggcggcggcggccatg 28204891
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gtgcaggaggcggcggcggcc 264 ||||||||||||||||||||| Sbjct: 9267740 gtgcaggaggcggcggcggcc 9267720 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 aagaagaggagggaaggagg 196 |||||||||||||||||||| Sbjct: 9380552 aagaagaggagggaaggagg 9380533
>gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, complete sequence Length = 175490 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaagga 194 ||||||||||||||||||||| Sbjct: 65492 aggaagaagaggagggaagga 65512
>gb|AF330636.1|AF330636 Plant DNA excision vector pX6-GFP, complete sequence Length = 14103 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 560 gcaacccttcttcctcttcct 540
>gb|AF309825.2|AF309825 Plant expression vector pER8, complete plasmid sequence Length = 11522 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 519 gcaacccttcttcctcttcct 499
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 3439191 gcaacccttcttcctcttcct 3439171
>gb|AF228714.1|AF228714 Ictalurus punctatus alpha actin gene, complete cds Length = 4746 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 242 aggtgcaggaggcggcggcggccat 266 ||||| ||||||||||||||||||| Sbjct: 2783 aggtggaggaggcggcggcggccat 2759
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggtgcaggaggcggcggcggc 263 ||||||||||||||||||||| Sbjct: 28113 ggtgcaggaggcggcggcggc 28133
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggcc 264 ||||||||||||||||||||| Sbjct: 86346 gtgcaggaggcggcggcggcc 86366
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 89874 gaggaagaagaggagggaagg 89854
>gb|AC157091.6| Mus musculus 6 BAC RP24-359O2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206538 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 94545 gaggaagaagaggagggaagg 94565
>ref|XM_313443.2| Anopheles gambiae str. PEST ENSANGP00000022425 (ENSANGG00000017740), partial mRNA Length = 2487 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggtgcaggaggcggcggcggc 263 ||||||||||||||||||||| Sbjct: 1186 ggtgcaggaggcggcggcggc 1206
>ref|XM_313441.2| Anopheles gambiae str. PEST ENSANGP00000020229 (ENSANGG00000017740), partial mRNA Length = 4690 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggtgcaggaggcggcggcggc 263 ||||||||||||||||||||| Sbjct: 1186 ggtgcaggaggcggcggcggc 1206
>ref|XM_313440.2| Anopheles gambiae str. PEST ENSANGP00000025242 (ENSANGG00000017740), mRNA Length = 1732 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 ggtgcaggaggcggcggcggc 263 ||||||||||||||||||||| Sbjct: 431 ggtgcaggaggcggcggcggc 451
>dbj|AK066112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051N02, full insert sequence Length = 3312 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaagg 193 ||||||||||||||||||||| Sbjct: 77 gaggaagaagaggagggaagg 57
>gb|AY104065.1| Zea mays PCO076650 mRNA sequence Length = 1990 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 242 aggtgcaggaggcggcggcggccat 266 ||||||||||||||| ||||||||| Sbjct: 1729 aggtgcaggaggcggaggcggccat 1753
>emb|CT030172.10| Mouse DNA sequence from clone RP23-313L22 on chromosome 13, complete sequence Length = 228833 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 agaagaggagggaaggaggag 198 ||||||||||||||||||||| Sbjct: 52639 agaagaggagggaaggaggag 52619
>emb|CT485608.3| Mouse DNA sequence from clone RP23-427F9 on chromosome 14, complete sequence Length = 182099 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggaagaagaggagggaaggag 195 ||||||||||||||||||||| Sbjct: 138020 ggaagaagaggagggaaggag 138000
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 5140511 gcaacccttcttcctcttcct 5140491
>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence Length = 187115 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 ||||||||||||||||| ||||||| Sbjct: 147414 gaggaagaagaggaggggaggagga 147390
>gb|AC127288.4| Mus musculus BAC clone RP23-358J11 from 8, complete sequence Length = 210710 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagga 197 ||||| ||||||||||||||||||| Sbjct: 103828 gaggaggaagaggagggaaggagga 103804
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 145601 gcaacccttcttcctcttcct 145581
>gb|U89960.1|UCU89960 Cloning vector pEG202 (pLexA), complete sequence Length = 10166 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 1766 gcaacccttcttcctcttcct 1746
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 5110525 gcaacccttcttcctcttcct 5110505
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4238838 gcaacccttcttcctcttcct 4238858
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4116316 gcaacccttcttcctcttcct 4116336
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 4481766 gcaacccttcttcctcttcct 4481746
>gb|J01643.1|ECOLEXA E.coli lexA gene coding for SOS function regulatory protein Length = 952 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcaacccttcttcctcttcct 70 ||||||||||||||||||||| Sbjct: 330 gcaacccttcttcctcttcct 310
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaagg 193 |||||||||||||||||||| Sbjct: 58577 aggaagaagaggagggaagg 58596
>gb|AC153899.3| Mus musculus BAC RP23-128C4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164582 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 27271 cttcttcctcttcctcgtag 27252
>gb|AC154786.2| Mus musculus BAC clone RP24-468B14 from chromosome 16, complete sequence Length = 148053 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggagga 197 |||| ||||||||||||||||||| Sbjct: 146158 aggaggaagaggagggaaggagga 146181
>gb|AC139064.13| Mus musculus chromosome 1, clone RP23-76C20, complete sequence Length = 242463 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aagaagaggagggaaggagg 196 |||||||||||||||||||| Sbjct: 137716 aagaagaggagggaaggagg 137735
>ref|XM_638785.1| Dictyostelium discoideum hypothetical protein (DDB0167934), partial mRNA Length = 3942 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 361 cttcttcctcttcctcgtag 342
>ref|XM_519917.1| PREDICTED: Pan troglodytes similar to A5D3 protein (LOC464347), mRNA Length = 747 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 235 gtgcaggaggcggcggcggc 254
>ref|NM_197753.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0089A17.6), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 847 ggaggcggcggcggccatga 866
>ref|XM_479445.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 72 aggaggcggcggcggccatg 53
>gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, complete sequence Length = 201596 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 agtaaataaataaaatatgaggag 114 ||||||||||||||| |||||||| Sbjct: 120701 agtaaataaataaaaaatgaggag 120724
>ref|NM_172495.3| Mus musculus nuclear receptor coactivator 7 (Ncoa7), mRNA Length = 4194 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 2480 cttcttcctcttcctcgtag 2461
>ref|XM_590665.2| PREDICTED: Bos taurus similar to Myb-binding protein 1A (LOC513045), mRNA Length = 5292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gcaggaggcggcggcggcca 265 |||||||||||||||||||| Sbjct: 3447 gcaggaggcggcggcggcca 3466
>ref|XM_419095.1| PREDICTED: Gallus gallus similar to Hypothetical protein D230016L03 (LOC421009), mRNA Length = 6174 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 3142 aggaggcggcggcggccatg 3123
>ref|XM_957707.1| Neurospora crassa OR74A hypothetical protein (NCU07625.1) partial mRNA Length = 2034 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tgctgcctcagctgctctgc 35 |||||||||||||||||||| Sbjct: 1337 tgctgcctcagctgctctgc 1318
>ref|XM_598917.2| PREDICTED: Bos taurus similar to family with sequence similarity 62 (C2 domain containing), member A (LOC520669), mRNA Length = 4276 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cagcagctgccgcgcgactc 310 |||||||||||||||||||| Sbjct: 339 cagcagctgccgcgcgactc 320
>ref|XM_328330.1| Neurospora crassa OR74A hypothetical protein (NCU07625.1) partial mRNA Length = 2034 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tgctgcctcagctgctctgc 35 |||||||||||||||||||| Sbjct: 1337 tgctgcctcagctgctctgc 1318
>ref|XM_676986.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8809.2), mRNA Length = 2361 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 aaggtgcaggaggcggcggc 260 |||||||||||||||||||| Sbjct: 2191 aaggtgcaggaggcggcggc 2210
>gb|AY286122.1| Cyanidioschyzon merolae DBV201 chromosome 1, complete sequence Length = 422021 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gctgctctgctttcgacctc 45 |||||||||||||||||||| Sbjct: 281606 gctgctctgctttcgacctc 281625
>gb|AC121301.8| Mus musculus chromosome 7, clone RP23-432H1, complete sequence Length = 205639 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 aaggtgcaggaggcggcggcggcc 264 |||||| ||||||||||||||||| Sbjct: 83192 aaggtgaaggaggcggcggcggcc 83169
>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence Length = 219359 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 cccagtaaataaataaaatatgaggaga 115 |||||||||||||||| | ||||||||| Sbjct: 212471 cccagtaaataaataacacatgaggaga 212444
>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence Length = 222892 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 ||||||||| |||||||||||||| Sbjct: 105916 gaggaagaaaaggagggaaggagg 105893
>gb|AC165081.3| Mus musculus BAC clone RP24-63B10 from chromosome 7, complete sequence Length = 182457 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 ||||||||| |||||||||||||| Sbjct: 56763 gaggaagaaaaggagggaaggagg 56740
>ref|XM_979045.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6890 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 556 gagcccgaggaagaagagga 575
>ref|XM_001002785.1| PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA Length = 6891 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 556 gagcccgaggaagaagagga 575
>gb|AC023818.5| Homo sapiens chromosome 16 clone CTD-2600H12, complete sequence Length = 173304 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcggcggccatgaggag 272 |||||||||||||||||||| Sbjct: 44101 gcggcggcggccatgaggag 44082
>gb|BT011080.1| Drosophila melanogaster SD01785 full insert cDNA Length = 4038 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 539 ggaggcggcggcggccatga 520
>emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggagga 197 |||||||||||||||| ||||||| Sbjct: 37426 aggaagaagaggaggggaggagga 37449
>emb|CT009525.6| Mouse DNA sequence from clone RP23-65F10 on chromosome 14, complete sequence Length = 183993 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 cagcaacccttcttcctcttcctc 71 |||||||||||| ||||||||||| Sbjct: 83944 cagcaacccttcctcctcttcctc 83921
>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete sequence Length = 187926 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gaagaggagggaaggaggag 198 |||||||||||||||||||| Sbjct: 35025 gaagaggagggaaggaggag 35006
>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence Length = 170292 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaagaagaggagggaaggag 195 |||||||||||||||||||| Sbjct: 134682 gaagaagaggagggaaggag 134701
>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete sequence Length = 207318 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 aagaagaggagggaaggagg 196 |||||||||||||||||||| Sbjct: 83067 aagaagaggagggaaggagg 83048
>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence Length = 192584 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggagga 197 |||| ||||||||||||||||||| Sbjct: 16769 aggaggaagaggagggaaggagga 16792
>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence Length = 178530 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||||||||| ||||||||| Sbjct: 147688 gaggaagaagaggatggaaggagg 147711
>ref|XM_812743.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509233.200) partial mRNA Length = 2349 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 caggaggcggcggcggccat 266 |||||||||||||||||||| Sbjct: 125 caggaggcggcggcggccat 144
>emb|BX927185.15| Zebrafish DNA sequence from clone CH211-198G1 in linkage group 8, complete sequence Length = 123568 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cccagtaaataaataaaata 107 |||||||||||||||||||| Sbjct: 83122 cccagtaaataaataaaata 83141
>emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 in linkage group 8, complete sequence Length = 151455 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cccagtaaataaataaaata 107 |||||||||||||||||||| Sbjct: 128973 cccagtaaataaataaaata 128992
>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence Length = 194372 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gaagaggagggaaggaggag 198 |||||||||||||||||||| Sbjct: 179274 gaagaggagggaaggaggag 179255
>ref|XM_546959.2| PREDICTED: Canis familiaris similar to paired immunoglobulin-like type 2 receptor alpha isoform 2 precursor (LOC489841), mRNA Length = 690 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ttgctgctgcctcagctgct 31 |||||||||||||||||||| Sbjct: 13 ttgctgctgcctcagctgct 32
>gb|AC112680.12| Mus musculus chromosome 9, clone RP23-203D1, complete sequence Length = 226883 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 aggaagaagaggagggaaggagga 197 |||||||||||||||| ||||||| Sbjct: 47381 aggaagaagaggaggggaggagga 47358
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||||||||||||| ||||| Sbjct: 96494 gaggaagaagaggagggagggagg 96517
>gb|AC006945.17| Mus musculus strain 129/Sv clone ct7-453l13 map 6, complete sequence Length = 120311 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 80532 gagcccgaggaagaagagga 80513
>gb|AC133425.3| Rattus norvegicus 7 BAC CH230-333I12 (Children's Hospital Oakland Research Institute) complete sequence Length = 64809 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 36688 gaggaagaagaggagggaag 36707
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the 3' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for X-linked small muscle protein and a CpG island, complete sequence Length = 124186 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 51107 gagcccgaggaagaagagga 51088
>gb|BC094359.1| Mus musculus zinc finger protein 499, mRNA (cDNA clone MGC:106784 IMAGE:6828341), complete cds Length = 2167 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 aaggtgcaggaggcggcggcggcc 264 |||||| ||||||||||||||||| Sbjct: 787 aaggtgaaggaggcggcggcggcc 810
>emb|AL390723.21| Human DNA sequence from clone RP11-19G1 on chromosome 9 Contains part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 94643 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaggagggaaggaggagtg 200 |||||||||||||||||||| Sbjct: 94333 agaggagggaaggaggagtg 94352
>gb|AC091542.3| Felis catus clone RP86-141L11, complete sequence Length = 142451 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gcccgaggaagaagaggagg 188 |||||||||||||||||||| Sbjct: 50347 gcccgaggaagaagaggagg 50366
>emb|AL159995.8| Human DNA sequence from clone RP11-2G13 on chromosome 9p21.1-21.3, complete sequence Length = 165049 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 agtaaataaataaaatatga 110 |||||||||||||||||||| Sbjct: 142856 agtaaataaataaaatatga 142837
>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene, complete cds Length = 309626 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 |||||| ||||||||||||||||| Sbjct: 277794 gaggaaaaagaggagggaaggagg 277771
>emb|AL031586.2|HS324C6 Human DNA sequence from clone RP3-324C6 on chromosome Xq26.1-27.3, complete sequence Length = 116392 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agtaaataaataaaatatga 110 |||||||||||||||||||| Sbjct: 5908 agtaaataaataaaatatga 5927
>ref|XM_971190.1| PREDICTED: Tribolium castaneum hypothetical protein LOC658418 (LOC658418), mRNA Length = 477 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ggcggcggcggccatgagga 271 |||||||||||||||||||| Sbjct: 76 ggcggcggcggccatgagga 95
>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence Length = 211119 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||||||||||||| ||||| Sbjct: 615 gaggaagaagaggagggagggagg 638
>gb|AC158238.2| Mus musculus BAC clone RP23-106F10 from chromosome 9, complete sequence Length = 242356 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggagga 197 |||||||||||||||| ||||||| Sbjct: 29291 aggaagaagaggaggggaggagga 29314
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cagtaaataaataaaatatg 109 |||||||||||||||||||| Sbjct: 177991 cagtaaataaataaaatatg 178010
>emb|AJ400626.1|HSA400626 Homo sapiens SIAH1 gene, exons 1-2 Length = 31705 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcggcggccatgaggag 272 |||||||||||||||||||| Sbjct: 5307 gcggcggcggccatgaggag 5288
>gb|AC120746.5| Rattus norvegicus BAC CH230-25H1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 234610 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 48563 gaggaagaagaggagggaag 48544 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 48519 gaggaagaagaggagggaag 48500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 48384 gaggaagaagaggagggaag 48365
>emb|AJ306557.1|HAN306557 Helianthus annuus hsp20.5 gene for 20.5 kDa heat-shock protein and hsp17.6 gene for 17.6 kDa heat-shock protein Length = 9589 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gaagaggagggaaggaggag 198 |||||||||||||||||||| Sbjct: 5613 gaagaggagggaaggaggag 5594
>emb|AJ238697.1|HVU238697 Hordeum vulgare mRNA for GPX12Hv, cultivar Haisa Length = 1026 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 315 aggaggcggcggcggccatg 296
>emb|BX950186.10| Zebrafish DNA sequence from clone CH211-103O18 in linkage group 15, complete sequence Length = 140307 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ataaataaaatatgaggaga 115 |||||||||||||||||||| Sbjct: 18528 ataaataaaatatgaggaga 18509
>gb|AC107375.5| Homo sapiens chromosome 8, clone CTA-204B4, complete sequence Length = 115626 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||| ||||||||||||||| Sbjct: 110930 gaggaagaggaggagggaaggagg 110907
>ref|NM_001025357.1| Homo sapiens AARD protein (LOC441376), mRNA Length = 751 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 235 gtgcaggaggcggcggcggc 254
>gb|AC100849.3| Homo sapiens chromosome 8, clone RP11-1080G15, complete sequence Length = 176814 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 20919 gaggaagaagaggagggaag 20900
>gb|AC087350.3| Homo sapiens chromosome 8, clone RP11-367C15, complete sequence Length = 193364 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 27108 gtgcaggaggcggcggcggc 27089
>gb|AC010331.8| Homo sapiens chromosome 19 clone CTD-3001H11, complete sequence Length = 114491 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 gaagaggagggaaggaggag 198 |||||||||||||||||||| Sbjct: 60101 gaagaggagggaaggaggag 60082
>gb|AY118654.1| Drosophila melanogaster SD06902 full insert cDNA Length = 3861 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 946 ggaggcggcggcggccatga 927
>dbj|AK128935.1| Mus musculus cDNA fis, clone TRACH3004652, weakly similar to Homo sapiens oxidation protection protein (OXR1) Length = 4186 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 2472 cttcttcctcttcctcgtag 2453
>dbj|AK092279.1| Homo sapiens cDNA FLJ34960 fis, clone NTONG2003515 Length = 2840 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 1479 gagcccgaggaagaagagga 1498
>gb|AC104391.5| Homo sapiens chromosome 8, clone CTD-3071K10, complete sequence Length = 148386 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 63849 gtgcaggaggcggcggcggc 63830
>ref|NM_170522.2| Drosophila melanogaster Zn finger homeodomain 1 CG1322-RC, transcript variant C (zfh1), mRNA Length = 3857 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 960 ggaggcggcggcggccatga 941
>gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, complete sequence Length = 193404 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 taaataaataaaatatgagg 112 |||||||||||||||||||| Sbjct: 108909 taaataaataaaatatgagg 108890
>ref|NM_057502.2| Drosophila melanogaster Zn finger homeodomain 1 CG1322-RB, transcript variant B (zfh1), mRNA Length = 5803 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 982 ggaggcggcggcggccatga 963
>gb|AC069029.9| Homo sapiens chromosome 15, clone RP11-654A16, complete sequence Length = 191018 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaaggagg 196 |||||| ||||||||||||||||| Sbjct: 58836 gaggaaaaagaggagggaaggagg 58859
>dbj|AK154877.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110H02 product:hypothetical Zn-finger, C2H2 type/BTB/POZ/Proline-rich region profile containing protein, full insert sequence Length = 2173 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 aaggtgcaggaggcggcggcggcc 264 |||||| ||||||||||||||||| Sbjct: 863 aaggtgaaggaggcggcggcggcc 886
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 aagaagaggagggaaggagg 196 |||||||||||||||||||| Sbjct: 79831 aagaagaggagggaaggagg 79812
>gb|AC068880.6| Homo sapiens chromosome 8, clone RP11-618M23, complete sequence Length = 189810 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 2949 gaggaagaagaggagggaag 2968
>gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, complete sequence Length = 155949 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||| ||||||||||||||| Sbjct: 14407 gaggaagaggaggagggaaggagg 14384
>dbj|AK165098.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330008L03 product:hypothetical TLDc containing protein, full insert sequence Length = 2192 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 267 cttcttcctcttcctcgtag 248
>dbj|AK166382.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930005C20 product:hypothetical Zn-finger, C2H2 type/BTB/POZ/Proline-rich region profile containing protein, full insert sequence Length = 2724 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 aaggtgcaggaggcggcggcggcc 264 |||||| ||||||||||||||||| Sbjct: 856 aaggtgaaggaggcggcggcggcc 879
>dbj|AK171679.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830003K21 product:similar to DJ187J11.3 (Novel protein similar to Drosophila L82 and predicted worm proteins) (Fragment) [Homo sapiens], full insert sequence Length = 2595 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 216 cttcttcctcttcctcgtag 197
>gb|AC026720.6| Homo sapiens chromosome 5 clone CTD-2193G21, complete sequence Length = 151090 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 133539 gaggaagaagaggagggaag 133558
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence Length = 203568 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 106961 gaggaagaagaggagggaag 106980
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 80329 ggaggcggcggcggccatga 80310
>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence Length = 192701 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 |||||||||||||||||| ||||| Sbjct: 26528 gaggaagaagaggagggagggagg 26505
>dbj|AK042369.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630085G14 product:weakly similar to LETHAL (3) 82FD PROTEIN [Drosophila melanogaster], full insert sequence Length = 2256 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 268 cttcttcctcttcctcgtag 249
>gb|BC080742.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:30462228) Length = 3889 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 1404 cttcttcctcttcctcgtag 1385
>dbj|AK033503.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030406N13 product:DJ187J11.3 (NOVEL PROTEIN SIMILAR TO DROSOPHILA L82 AND PREDICTED WORM PROTEINS) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 1318 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 212 cttcttcctcttcctcgtag 193
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8, complete sequence Length = 168607 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 caggaggcggcggcggccat 266 |||||||||||||||||||| Sbjct: 69720 caggaggcggcggcggccat 69739
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 21648425 ggaggcggcggcggccatga 21648406
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcccgaggaagaagaggagg 188 |||||||||||||||||||| Sbjct: 19640760 gcccgaggaagaagaggagg 19640741
>dbj|AB181519.1| Homo sapiens mRNA for AARD protein, complete cds, novel gene containing alanine and arginine rich domain Length = 751 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 235 gtgcaggaggcggcggcggc 254
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 87055 ggaggcggcggcggccatga 87036
>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence Length = 171452 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cagtaaataaataaaatatg 109 |||||||||||||||||||| Sbjct: 36996 cagtaaataaataaaatatg 36977
>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence Length = 159324 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaaggagg 196 ||||| |||||||||||||||||| Sbjct: 63378 gaggaggaagaggagggaaggagg 63355
>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence Length = 145512 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 gaagaggagggaaggaggag 198 |||||||||||||||||||| Sbjct: 81884 gaagaggagggaaggaggag 81903
>gb|AC037423.16|AC037423 Homo sapiens chromosome 9 clone RP11-287F15, complete sequence Length = 171029 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaggagggaaggaggagtg 200 |||||||||||||||||||| Sbjct: 64993 agaggagggaaggaggagtg 65012
>gb|AC009107.11| Homo sapiens chromosome 16 clone RP11-459F6, complete sequence Length = 208220 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaggagggaaggaggagtg 200 |||||||||||||||||||| Sbjct: 149498 agaggagggaaggaggagtg 149517
>gb|AC016751.7| Homo sapiens BAC clone RP11-504O20 from 2, complete sequence Length = 176379 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctcagctgctctgctttcga 41 |||||||||||||||||||| Sbjct: 131848 ctcagctgctctgctttcga 131829
>gb|AC009156.10| Homo sapiens chromosome 16 clone RP11-5G20, complete sequence Length = 184884 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cctagttagattgctgctgc 21 |||||||||||||||||||| Sbjct: 128996 cctagttagattgctgctgc 128977
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 319802 cttcttcctcttcctcgtag 319821
>gb|M63449.1|DROZFH1 Drosophila melanogaster zinc-finger homeodomain protein 1 (zfh-1) gene, complete cds Length = 5823 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 981 ggaggcggcggcggccatga 962
>dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E04 Length = 146710 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gcccgaggaagaagaggagg 188 |||||||||||||||||||| Sbjct: 109212 gcccgaggaagaagaggagg 109193
>gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, complete sequence Length = 102564 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaaggagga 197 |||| ||||||||||||||||||| Sbjct: 67424 aggaggaagaggagggaaggagga 67447
>gb|AC096654.1| Homo sapiens BAC clone RP11-17I18 from 2, complete sequence Length = 153396 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ataaataaaatatgaggagatgaa 119 |||||||||| ||||||||||||| Sbjct: 46145 ataaataaaacatgaggagatgaa 46122
>gb|AC060813.12| Homo sapiens chromosome 8, clone RP11-809N7, complete sequence Length = 144872 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 40902 gaggaagaagaggagggaag 40921
>ref|NM_001024699.1| Mus musculus zinc finger protein 499 (Zfp499), mRNA Length = 2167 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 aaggtgcaggaggcggcggcggcc 264 |||||| ||||||||||||||||| Sbjct: 787 aaggtgaaggaggcggcggcggcc 810
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence Length = 212426 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ggaagaagaggagggaaggaggag 198 |||||||| ||||||||||||||| Sbjct: 176750 ggaagaaggggagggaaggaggag 176773
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aaatatgaggagatgaagag 122 |||||||||||||||||||| Sbjct: 340039 aaatatgaggagatgaagag 340020
>gb|BC076623.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:30637138), partial cds Length = 4735 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 2255 cttcttcctcttcctcgtag 2236
>gb|BC058572.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:6487554), complete cds Length = 1343 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 220 cttcttcctcttcctcgtag 201
>gb|BC049997.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:6439580), complete cds Length = 1371 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 248 cttcttcctcttcctcgtag 229
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 60455 aggaggcggcggcggccatg 60436
>gb|BC080670.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:5061755), complete cds Length = 1240 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 222 cttcttcctcttcctcgtag 203
>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18, complete sequence Length = 184543 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 caggaggcggcggcggccat 266 |||||||||||||||||||| Sbjct: 91101 caggaggcggcggcggccat 91120 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 caggaggcggcggcggccat 266 |||||||||||||||||||| Sbjct: 91071 caggaggcggcggcggccat 91090
>gb|BC042791.1| Mus musculus nuclear receptor coactivator 7, mRNA (cDNA clone IMAGE:4975173), partial cds Length = 2808 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 729 cttcttcctcttcctcgtag 710
>emb|AL672090.5| Mouse DNA sequence from clone RP23-322K21 on chromosome X, complete sequence Length = 211450 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaataaataaaatatgagga 113 |||||||||||||||||||| Sbjct: 435 aaataaataaaatatgagga 416
>dbj|AK106294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B09, full insert sequence Length = 1804 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 688 ggaggcggcggcggccatga 707
>dbj|AK099431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012F23, full insert sequence Length = 528 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 aggaggcggcggcggccatg 267 |||||||||||||||||||| Sbjct: 72 aggaggcggcggcggccatg 53
>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete sequence Length = 238441 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 agtaaataaataaaatatgaggag 114 ||||||||||||||| |||||||| Sbjct: 73310 agtaaataaataaaaaatgaggag 73333
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 103710 ggaggcggcggcggccatga 103691
>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete sequence Length = 202607 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 taaataaataaaatatgagg 112 |||||||||||||||||||| Sbjct: 56108 taaataaataaaatatgagg 56127
>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence Length = 278172 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ggaagaagaggagggaagga 194 |||||||||||||||||||| Sbjct: 159033 ggaagaagaggagggaagga 159052
>gb|BC088711.1| Xenopus laevis hypothetical LOC496243, mRNA (cDNA clone IMAGE:7201876), partial cds Length = 2113 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 atatgaggagatgaagagct 124 |||||||||||||||||||| Sbjct: 1696 atatgaggagatgaagagct 1677
>emb|AL773597.29| Mouse DNA sequence from clone RP23-80A13 on chromosome 4, complete sequence Length = 252286 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggaagaagaggagggaagga 194 |||||||||||||||||||| Sbjct: 143616 ggaagaagaggagggaagga 143597
>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete sequence Length = 205184 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggaagaagaggagggaag 192 |||||||||||||||||||| Sbjct: 116902 gaggaagaagaggagggaag 116883
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ggaggcggcggcggccatga 268 |||||||||||||||||||| Sbjct: 21660088 ggaggcggcggcggccatga 21660069
>gb|BC109031.1| Homo sapiens hypothetical protein LOC257240, mRNA (cDNA clone MGC:125650 IMAGE:40027951), complete cds Length = 2638 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 1448 gagcccgaggaagaagagga 1467
>gb|AC134987.5| Mus musculus BAC clone RP23-117E24 from 14, complete sequence Length = 196751 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 cagcaacccttcttcctcttcctc 71 |||||||||||| ||||||||||| Sbjct: 168193 cagcaacccttcctcctcttcctc 168216
>emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 aggaagaagaggagggaaggagga 197 |||||||||||||||| ||||||| Sbjct: 8726 aggaagaagaggaggggaggagga 8703
>gb|U43323.1|ATU43323 Arabidopsis thaliana profilin 2 and profilin 3 genes, complete cds Length = 5329 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cagtaaataaataaaatatg 109 |||||||||||||||||||| Sbjct: 3805 cagtaaataaataaaatatg 3824
>gb|AC153971.3| Mus musculus 10 BAC RP24-254O21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cttcttcctcttcctcgtag 75 |||||||||||||||||||| Sbjct: 41364 cttcttcctcttcctcgtag 41383
>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete sequence Length = 157222 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaataaataaaatatgagga 113 |||||||||||||||||||| Sbjct: 156677 aaataaataaaatatgagga 156658
>emb|AL672293.14| Mouse DNA sequence from clone RP23-180D16 on chromosome X, complete sequence Length = 177087 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 taaataaataaaatatgagg 112 |||||||||||||||||||| Sbjct: 144628 taaataaataaaatatgagg 144609
>ref|NM_153270.1| Homo sapiens hypothetical protein LOC257240 (RP11-450P7.3), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcccgaggaagaagagga 186 |||||||||||||||||||| Sbjct: 1479 gagcccgaggaagaagagga 1498
>emb|AL732565.9| Mouse DNA sequence from clone RP23-318A9 on chromosome 4, complete sequence Length = 203128 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agtaaataaataaaatatga 110 |||||||||||||||||||| Sbjct: 142221 agtaaataaataaaatatga 142240
>emb|AL732528.12| Mouse DNA sequence from clone RP23-218B17 on chromosome 2, complete sequence Length = 166465 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aggaagaagaggagggaagg 193 |||||||||||||||||||| Sbjct: 139714 aggaagaagaggagggaagg 139733
>emb|AL732403.9| Mouse DNA sequence from clone RP23-119L20 on chromosome 2, complete sequence Length = 211892 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 ccgaggaagaagaggagggaagga 194 |||| ||||||||||||||||||| Sbjct: 63483 ccgatgaagaagaggagggaagga 63506
>emb|X53423.1|DSCHOS18 D. subobscura s18, s15, s19 and s16 chorion protein genes Length = 6957 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 cagcggccgaagcagcagctgccg 302 ||||||||||||||||||| |||| Sbjct: 2988 cagcggccgaagcagcagcagccg 2965
>dbj|AP004074.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1266F9, complete sequence Length = 156441 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gtgcaggaggcggcggcggc 263 |||||||||||||||||||| Sbjct: 93334 gtgcaggaggcggcggcggc 93353
>dbj|AB072970.1| Homo sapiens Siah-1 gene, promoter region and exon 1 Length = 3550 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcggcggccatgaggag 272 |||||||||||||||||||| Sbjct: 3287 gcggcggcggccatgaggag 3268
>dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-760N9, complete sequences Length = 150638 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cccagtaaataaataaaata 107 |||||||||||||||||||| Sbjct: 131895 cccagtaaataaataaaata 131914 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,446,037 Number of Sequences: 3902068 Number of extensions: 6446037 Number of successful extensions: 326101 Number of sequences better than 10.0: 220 Number of HSP's better than 10.0 without gapping: 219 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 324010 Number of HSP's gapped (non-prelim): 2091 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
