>ref|XM_475642.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1821

 Score =  143 bits (72), Expect = 5e-31
 Identities = 135/156 (86%)
 Strand = Plus / Plus

                                                                       
Query: 253 gaagtggatgtagaaccgatagttgaagtttgcacgggaaaatttggtgactaccagtgc 312
           |||||||| || || || || |||||||| ||||| | ||| ||||||||||||||||||
Sbjct: 124 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtgc 183

                                                                       
Query: 313 aacaatgcaatgggattgtggtcaaaagtaaagggatccgggacaagcttcaaaaacccc 372
           ||||||||||||||||| ||||||| | | || ||||| || ||||| ||||| ||||||
Sbjct: 184 aacaatgcaatgggattatggtcaagaattaaaggatctggaacaagtttcaagaacccc 243

                                               
Query: 373 aatgcaattggacagtcgattgctaagaacctgcct 408
           ||||||||||||||| | ||||| ||||||||||||
Sbjct: 244 aatgcaattggacaggccattgcgaagaacctgcct 279

>dbj|AK066161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052F22, full
           insert sequence
          Length = 2136

 Score =  143 bits (72), Expect = 5e-31
 Identities = 135/156 (86%)
 Strand = Plus / Plus

                                                                       
Query: 253 gaagtggatgtagaaccgatagttgaagtttgcacgggaaaatttggtgactaccagtgc 312
           |||||||| || || || || |||||||| ||||| | ||| ||||||||||||||||||
Sbjct: 297 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtgc 356

                                                                       
Query: 313 aacaatgcaatgggattgtggtcaaaagtaaagggatccgggacaagcttcaaaaacccc 372
           ||||||||||||||||| ||||||| | | || ||||| || ||||| ||||| ||||||
Sbjct: 357 aacaatgcaatgggattatggtcaagaattaaaggatctggaacaagtttcaagaacccc 416

                                               
Query: 373 aatgcaattggacagtcgattgctaagaacctgcct 408
           ||||||||||||||| | ||||| ||||||||||||
Sbjct: 417 aatgcaattggacaggccattgcgaagaacctgcct 452



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 73/83 (87%), Gaps = 3/83 (3%)
 Strand = Plus / Plus

                                                                       
Query: 58  ggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtccacc 117
           |||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |||
Sbjct: 114 ggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---acc 170

                                  
Query: 118 accatgggagacgagacctccac 140
           |||||||| ||||||||||||||
Sbjct: 171 accatgggggacgagacctccac 193

>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                         
Query: 56    taggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtcca 115
             |||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |
Sbjct: 52503 taggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---a 52559

                                      
Query: 116   ccaccatgggagacgagacctccac 140
             |||||||||| ||||||||||||||
Sbjct: 52560 ccaccatgggggacgagacctccac 52584



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 311   gcaacaatgcaatgggattgtggtcaaaagtaaagggatccgggacaagcttcaaaaacc 370
             ||||||||||||||||||| ||||||| | | || ||||| || ||||| ||||| ||||
Sbjct: 52981 gcaacaatgcaatgggattatggtcaagaattaaaggatctggaacaagtttcaagaacc 53040

                              
Query: 371   ccaatgcaattggacag 387
             |||||||||||||||||
Sbjct: 53041 ccaatgcaattggacag 53057



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 253   gaagtggatgtagaaccgatagttgaagtttgcacgggaaaatttggtgactaccagtg 311
             |||||||| || || || || |||||||| ||||| | ||| |||||||||||||||||
Sbjct: 52796 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtg 52854

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                           
Query: 56      taggtcattgtagagcatctcccttcacaaggttaccgaggagtgcctgctacgcgtcca 115
               |||||||||||||||||||| ||| | ||||||  |||||||| ||||||||||||   |
Sbjct: 3630156 taggtcattgtagagcatcttcctccgcaaggtctccgaggagggcctgctacgcg---a 3630212

                                        
Query: 116     ccaccatgggagacgagacctccac 140
               |||||||||| ||||||||||||||
Sbjct: 3630213 ccaccatgggggacgagacctccac 3630237



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                           
Query: 311     gcaacaatgcaatgggattgtggtcaaaagtaaagggatccgggacaagcttcaaaaacc 370
               ||||||||||||||||||| ||||||| | | || ||||| || ||||| ||||| ||||
Sbjct: 3630634 gcaacaatgcaatgggattatggtcaagaattaaaggatctggaacaagtttcaagaacc 3630693

                                
Query: 371     ccaatgcaattggacag 387
               |||||||||||||||||
Sbjct: 3630694 ccaatgcaattggacag 3630710



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                          
Query: 253     gaagtggatgtagaaccgatagttgaagtttgcacgggaaaatttggtgactaccagtg 311
               |||||||| || || || || |||||||| ||||| | ||| |||||||||||||||||
Sbjct: 3630449 gaagtggaagtcgatcctatggttgaagtctgcacagcaaagtttggtgactaccagtg 3630507

>ref|NM_132853.2| Drosophila melanogaster Arginyl-tRNA synthetase CG9020-RA
           (Aats-arg), mRNA
          Length = 2132

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 292 aaatttggtgactaccagtgcaacaatgcaatgggattgt 331
           ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 395 aaattcggcgactatcagtgcaacaatgccatgggattgt 434

>gb|AY070924.1| Drosophila melanogaster RE02962 full length cDNA
          Length = 2141

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 292 aaatttggtgactaccagtgcaacaatgcaatgggattgt 331
           ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 395 aaattcggcgactatcagtgcaacaatgccatgggattgt 434

>gb|AC092401.1|AC092401 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
              BACR25C18, complete sequence
          Length = 185200

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 292    aaatttggtgactaccagtgcaacaatgcaatgggattgt 331
              ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 155158 aaattcggcgactatcagtgcaacaatgccatgggattgt 155119

>gb|AC013431.9|AC013431 Drosophila melanogaster, chromosome X, region 13E-13F, BAC clone
              BACR22H11, complete sequence
          Length = 191558

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 292    aaatttggtgactaccagtgcaacaatgcaatgggattgt 331
              ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 133888 aaattcggcgactatcagtgcaacaatgccatgggattgt 133849

>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete
              sequence
          Length = 303344

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 292    aaatttggtgactaccagtgcaacaatgcaatgggattgt 331
              ||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 137878 aaattcggcgactatcagtgcaacaatgccatgggattgt 137839

>ref|XM_816031.1| Trypanosoma cruzi strain CL Brener arginyl-tRNA synthetase
           (Tc00.1047053508355.320) partial mRNA
          Length = 2079

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 304 taccagtgcaacaatgcaatgggatt 329
           ||||||||||||||||| ||||||||
Sbjct: 130 taccagtgcaacaatgcgatgggatt 155

>ref|XM_776166.1| PREDICTED: Strongylocentrotus purpuratus similar to arginyl-tRNA
           synthetase (LOC575790), mRNA
          Length = 1998

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 295 tttggtgactaccagtgcaacaatgcaatg 324
           ||||| |||||||||||||||| |||||||
Sbjct: 340 tttggagactaccagtgcaacagtgcaatg 369

>gb|AC097382.3| Homo sapiens BAC clone RP11-367J11 from 4, complete sequence
          Length = 210515

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 136    tccacttctgcctcaggctcgg 157
              ||||||||||||||||||||||
Sbjct: 201470 tccacttctgcctcaggctcgg 201449

>ref|XM_509080.1| PREDICTED: Pan troglodytes similar to keratin 1; Keratin-1;
           cytokeratin 1; hair alpha protein (LOC451920), mRNA
          Length = 1676

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 198 tgtcaagcagcagatctccaacttg 222
           ||||||| |||||||||||||||||
Sbjct: 440 tgtcaagaagcagatctccaacttg 464

>gb|BC028294.1| Homo sapiens mRNA similar to keratin 1 (epidermolytic hyperkeratosis)
            (cDNA clone IMAGE:4779138)
          Length = 3114

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 198  tgtcaagcagcagatctccaacttg 222
            ||||||| |||||||||||||||||
Sbjct: 1913 tgtcaagaagcagatctccaacttg 1937

>gb|BC070893.1| Rattus norvegicus SH3-domain GRB2-like 1, mRNA (cDNA clone
          MGC:91401 IMAGE:7099223), complete cds
          Length = 2035

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gtggcggcgcctacccccgcg 49
          |||||||||||||||||||||
Sbjct: 39 gtggcggcgcctacccccgcg 59

>ref|NM_006121.2| Homo sapiens keratin 1 (epidermolytic hyperkeratosis) (KRT1), mRNA
          Length = 2507

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 198  tgtcaagcagcagatctccaacttg 222
            ||||||| |||||||||||||||||
Sbjct: 1289 tgtcaagaagcagatctccaacttg 1313

>ref|NM_031239.2| Rattus norvegicus SH3-domain GRB2-like 1 (Sh3gl1), mRNA
          Length = 2010

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gtggcggcgcctacccccgcg 49
          |||||||||||||||||||||
Sbjct: 43 gtggcggcgcctacccccgcg 63

>emb|BX119986.8| Mouse DNA sequence from clone RP23-440J5 on chromosome X, complete
             sequence
          Length = 196937

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 393   tgctaagaacctgcctgcctg 413
             |||||||||||||||||||||
Sbjct: 20770 tgctaagaacctgcctgcctg 20790

>gb|AF009602.1|AF009602 Rattus norvegicus SH3p8 mRNA, complete cds
          Length = 1546

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gtggcggcgcctacccccgcg 49
          |||||||||||||||||||||
Sbjct: 28 gtggcggcgcctacccccgcg 48

>gb|BC063697.1| Homo sapiens keratin 1 (epidermolytic hyperkeratosis), mRNA (cDNA
            clone MGC:75449 IMAGE:4746001), complete cds
          Length = 2470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 198  tgtcaagcagcagatctccaacttg 222
            ||||||| |||||||||||||||||
Sbjct: 1283 tgtcaagaagcagatctccaacttg 1307

>gb|M10938.1|HUMKTEP2A Human epidermal 67-kDa type II keratin mRNA
          Length = 1924

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 198 tgtcaagcagcagatctccaacttg 222
           ||||||| |||||||||||||||||
Sbjct: 789 tgtcaagaagcagatctccaacttg 813

>dbj|AB008161.1| Rattus norvegicus mRNA for SH3P8, complete cds
          Length = 2010

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gtggcggcgcctacccccgcg 49
          |||||||||||||||||||||
Sbjct: 43 gtggcggcgcctacccccgcg 63

>ref|NM_105324.1| Arabidopsis thaliana ATP binding / arginine-tRNA ligase/ tRNA
           ligase AT1G66530 mRNA, complete cds
          Length = 1991

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 292 aaatttggtgactaccagtgcaacaatgcaatggga 327
           |||||||| || ||||| || |||||||||||||||
Sbjct: 195 aaatttggagattaccaatgtaacaatgcaatggga 230

>gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete sequence
          Length = 170684

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 5     gcggccgcagcagcaactgcagtagtggcggc 36
             ||||||||||||||| |||||| || ||||||
Sbjct: 33998 gcggccgcagcagcagctgcagcagcggcggc 33967

>gb|AY358115.1| Homo sapiens clone DNA183018 DAAT9248 (UNQ9248) mRNA, complete
          cds
          Length = 2609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 3  tcgcggccgcagcagcaactgcag 26
          ||||||||||||||||||| ||||
Sbjct: 2  tcgcggccgcagcagcaacagcag 25

>gb|AC015914.8| Homo sapiens chromosome 15, clone RP11-111E14, complete sequence
          Length = 170078

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     gcagcagcaactgcagtagt 30
              ||||||||||||||||||||
Sbjct: 104930 gcagcagcaactgcagtagt 104911

>gb|AY093956.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, complete cds
          Length = 1773

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 292 aaatttggtgactaccagtgcaacaatgcaatggga 327
           |||||||| || ||||| || |||||||||||||||
Sbjct: 130 aaatttggagattaccaatgtaacaatgcaatggga 165

>ref|NM_165841.1| Drosophila melanogaster engrailed CG9015-RB, transcript variant B
           (en), mRNA
          Length = 2794

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 5   gcggccgcagcagcaactgcagtagtggcggc 36
           ||||||||||||||| |||||| || ||||||
Sbjct: 782 gcggccgcagcagcagctgcagcagcggcggc 751

>ref|NM_078976.3| Drosophila melanogaster engrailed CG9015-RA, transcript variant A
           (en), mRNA
          Length = 2467

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 5   gcggccgcagcagcaactgcagtagtggcggc 36
           ||||||||||||||| |||||| || ||||||
Sbjct: 455 gcggccgcagcagcagctgcagcagcggcggc 424

>gb|AF375433.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, complete cds
          Length = 1991

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 292 aaatttggtgactaccagtgcaacaatgcaatggga 327
           |||||||| || ||||| || |||||||||||||||
Sbjct: 195 aaatttggagattaccaatgtaacaatgcaatggga 230

>gb|AY069448.1| Drosophila melanogaster LD16125 full length cDNA
          Length = 2458

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 5   gcggccgcagcagcaactgcagtagtggcggc 36
           ||||||||||||||| |||||| || ||||||
Sbjct: 435 gcggccgcagcagcagctgcagcagcggcggc 404

>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence
          Length = 220183

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ccaccaccatgggagacgag 132
             ||||||||||||||||||||
Sbjct: 59257 ccaccaccatgggagacgag 59276

>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete
             sequence
          Length = 261690

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 5     gcggccgcagcagcaactgcagtagtggcggc 36
             ||||||||||||||| |||||| || ||||||
Sbjct: 62124 gcggccgcagcagcagctgcagcagcggcggc 62155

>emb|AL954180.6| Zebrafish DNA sequence from clone CH211-222A10, complete sequence
          Length = 225504

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 208   cagatctccaacttggtggctctgtcac 235
             ||||||||||| |||||| |||||||||
Sbjct: 72491 cagatctccaatttggtgcctctgtcac 72464

>ref|NM_001004432.1| Homo sapiens leucine rich repeat neuronal 6D (LRRN6D), mRNA
          Length = 2609

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 3  tcgcggccgcagcagcaactgcag 26
          ||||||||||||||||||| ||||
Sbjct: 2  tcgcggccgcagcagcaacagcag 25

>gb|M10017.1|DROENGM Drosophila melanogaster engrailed protein (en) mRNA, complete cds
          Length = 2412

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 5   gcggccgcagcagcaactgcagtagtggcggc 36
           ||||||||||||||| |||||| || ||||||
Sbjct: 410 gcggccgcagcagcagctgcagcagcggcggc 379


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,258,339
Number of Sequences: 3902068
Number of extensions: 3258339
Number of successful extensions: 61308
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61232
Number of HSP's gapped (non-prelim): 73
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)