>NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (Zinc finger
           C3HC-type protein 1)
          Length = 502

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 25/74 (33%), Positives = 32/74 (43%)
 Frame = +3

Query: 180 AHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAKPKAASSLACSXRGWVNVDMD 359
           A S    G+     PS     +     R+ TF    W  KP   S L C+  GWV V+ D
Sbjct: 54  ATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPPELSPLVCAKYGWVTVECD 113

Query: 360 KIECESCGAHLIFS 401
            ++C SC A L  S
Sbjct: 114 MLKCSSCQAFLCAS 127

>NIPA_HUMAN (Q86WB0) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (hNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 502

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 25/74 (33%), Positives = 32/74 (43%)
 Frame = +3

Query: 180 AHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAKPKAASSLACSXRGWVNVDMD 359
           A S    G+     PS     +     R+ TF    W  KP   S L C+  GWV V+ D
Sbjct: 54  ATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECD 113

Query: 360 KIECESCGAHLIFS 401
            ++C SC A L  S
Sbjct: 114 MLKCSSCQAFLCAS 127

>NIPA_MOUSE (Q80YV2) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (mNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 501

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +3

Query: 261 RLATFKPSTWDAKPKAASSLACSXRGWVNVDMDKIECESCGAHLIFS 401
           R+ TF    W  KP   S L C+  GWV V+ D ++C SC A L  S
Sbjct: 81  RVETFSSLKWAGKPPELSPLICAKYGWVTVECDMLKCSSCQAFLCAS 127

>NIPA_XENLA (Q6P7H4) NIPA-like protein (Zinc finger C3HC-type protein 1-like)|
          Length = 477

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 204 TALDSAPSCRPWE---RGDLLRRLATFKPSTWDAKPKAASSLACSXRGWVNVDMDKIECE 374
           TA +  P    +E   +     R+ +F    W  KP     L C+  GW N++ D ++C 
Sbjct: 52  TAFEDLPGNNSYESTSKDAFFSRVESFSSLKWAGKPPELCPLICAKYGWCNIECDMLKCS 111

Query: 375 SCGAHLIFS 401
           SC A+L  S
Sbjct: 112 SCNAYLCAS 120

>NIPA_XENTR (Q5M8S7) NIPA-like protein (Zinc finger C3HC-type protein 1-like)|
          Length = 478

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 261 RLATFKPSTWDAKPKAASSLACSXRGWVNVDMDKIECESCGAHLIFS 401
           R+ +F    W  KP     L C+  GW N++ D ++C SC A+L  S
Sbjct: 72  RVESFSSLKWAGKPSELCPLICAKYGWSNIECDMLKCSSCNAYLCAS 118

>MK04_RAT (Q63454) Mitogen-activated protein kinase 4 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 4) (ERK-4) (MAP
           kinase isoform p63) (p63-MAPK) (MNK2) (Fragment)
          Length = 274

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 171 YGPAHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAK 299
           +  AH  +     LD+ P  R  ++ +LLR + +F  STW+ K
Sbjct: 203 FAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSSTWEVK 245

>MK04_MOUSE (Q6P5G0) Mitogen-activated protein kinase 4 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 4) (ERK-4)
          Length = 583

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 171 YGPAHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAK 299
           +  AH  +     LD+ P  R  ++ +LLR + +F  STW+ K
Sbjct: 229 FAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSSTWEVK 271

>MK04_HUMAN (P31152) Mitogen-activated protein kinase 4 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 4) (ERK-4) (MAP
           kinase isoform p63) (p63-MAPK)
          Length = 557

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 171 YGPAHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAK 299
           +  AH  +     L++ P  R  ++ +LLR + +F  STW+ K
Sbjct: 229 FAGAHELEQMQLILETIPVIREEDKDELLRVMPSFVSSTWEVK 271

>APPA_BACSU (P42061) Oligopeptide-binding protein appA precursor|
          Length = 543

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = -1

Query: 228 KMVQNPKQFQQHQSYEQAHRHVVQRVMRNQPWKPVCYPAN 109
           K++++ K     + Y + +  + Q++  +QP+  + YP N
Sbjct: 475 KLMKDAKSISDRKQYSKEYEQIYQKIAEDQPYTFLYYPNN 514

>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)|
          Length = 1403

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 246 HAPMVYKMVQNPKQFQQHQSYE-QAHRHVVQRVMRNQPWKPVCYPA 112
           HA  V ++  + +Q QQ Q ++ QAH HVV  V   Q + PV   A
Sbjct: 200 HATSVIRISSSQQQHQQQQQHQQQAHPHVV--VSGGQTFHPVIVDA 243

>MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1|
           (EC 3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 667

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 340 QPL*EQANELAAFGLASQVEGLNVASRRSKSPRSHGLQDGAESKAVP 200
           QPL +     A   LA+ V+G N AS+ S  P+S   Q   +   +P
Sbjct: 134 QPLDQDEGHAAIPVLAAPVQGDNAASQASSHPQSSAQQHNQQQPQLP 180

>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
 Frame = +3

Query: 102  SIDWLGNRQASRVDSSSHVAPHAYGPAHSFDAA--------------GTALDSAPSCRPW 239
            S + LG+ + S   S   + P +  P+ S D A              G   D    CRP 
Sbjct: 2254 SAEGLGSGKESAAHSLWDLTPLSPAPSASLDLAPAPAPAPAPAPGLPGDLGDGTLPCRPE 2313

Query: 240  ERGDLLRRLATFKPSTWDAKPKAASSLACSXRGWVNVDMDKIECES 377
              G+L ++ + F   + D +       + +  G+V    +K E E+
Sbjct: 2314 CTGELTKKPSPFLSPSGDHEANGPGETSLNPPGFVTATAEKEEAEA 2359

>LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp|
          Length = 657

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -1

Query: 270 LPVDEVSLHAPMVYKMVQNPKQFQQH----QSYEQAHRHVVQRVMRNQPWKPV 124
           +P    +LH        Q  +Q+QQH    Q  +  H+H +Q+  +  P  P+
Sbjct: 169 IPPAATTLHQQQQQLQHQQQQQYQQHQQQLQQQQHQHQHYLQQQQQTLPPPPI 221

>F16P2_SPIOL (P14766) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11)|
           (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
           (FBPase)
          Length = 341

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 148 EESTLEACLLPSQSMLTILICIAGDEAPAELATGVGASRSSL 23
           E +TLE  L P ++M+    C+ G      L+TG G +  +L
Sbjct: 148 ETATLEDVLQPGKNMVAAGYCMYGSSCTLVLSTGSGVNGFTL 189

>F16P2_PEA (Q8RW99) Fructose-1,6-bisphosphatase, cytosolic (EC 3.1.3.11)|
           (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
           (FBPase)
          Length = 341

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 148 EESTLEACLLPSQSMLTILICIAGDEAPAELATGVGASRSSL 23
           E +TLE  L P ++M+    C+ G      L+TG G +  +L
Sbjct: 148 ETATLEDVLQPGKNMVAAGYCMYGSSCTLVLSTGSGVNGFTL 189

>CDC20_YEAST (P26309) APC/C activator protein CDC20 (Cell division control|
           protein 20)
          Length = 610

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 9/128 (7%)
 Frame = +3

Query: 9   IPPQEREEREXXXXXXXXXXXXXXXMQINIVSIDWLGN---------RQASRVDSSSHVA 161
           +P   R++                  ++NI+S DW  N         +++S ++  +   
Sbjct: 1   MPESSRDKGNAAISGNRSVLSIASPTKLNILSSDWSRNQGKVSKNSLKRSSSLNIRNSKR 60

Query: 162 PHAYGPAHSFDAAGTALDSAPSCRPWERGDLLRRLATFKPSTWDAKPKAASSLACSXRGW 341
           P     A+S  +       AP         L+RR ++F    +DAK   A+  A S R +
Sbjct: 61  PSLQASANSIYSRPKITIGAPP--------LIRRDSSFFKDEFDAKKDKATFSAYSSRSY 112

Query: 342 VNVDMDKI 365
             +  + +
Sbjct: 113 PTIGSESV 120

>OSKA_DROVI (Q24741) Maternal effect protein oskar|
          Length = 594

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 234 VYKMVQNPKQFQQHQSYEQAHRHVVQR 154
           +++  Q PKQ QQ Q ++  H+H  Q+
Sbjct: 40  LHQQQQQPKQQQQQQQHQSQHQHQQQK 66


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,380,783
Number of Sequences: 219361
Number of extensions: 852919
Number of successful extensions: 2551
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2547
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)