ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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Clone |
Length |
Accession No. |
nt | uniprot | TIGR-ORF | RAP-ORF | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | full/ not_full | definition | hit | |||
| bags9f24 | 552 | AV833453 | not_full | ref|XM_478412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1747 | 37 | not_full | Y872_HAEIN (Q57491) Hypothetical sugar transferase HI0872 (EC 2.-.-.-) Length = 471 | 10 | -- | --- | - | -- | --- | - |
| bags9f23 | 628 | AV915002 | not_full | emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 Length = 833 | 97 | not_full | ABP20_PRUPE (O04011) Auxin-binding protein ABP20 precursor Length = 214 | 101 | -- | --- | - | -- | --- | - |
| bags9f22 | 638 | AV915001 | not_full | gb|AY103915.1| Zea mays PCO106165 mRNA sequence Length = 978 | 208 | not_full | R10AA_ARATH (Q8VZB9) 60S ribosomal protein L10a-1 Length = 216 | 59 | -- | --- | - | -- | --- | - |
| bags9f21 | 31 | AV833452 | not_full | gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 | 27 | -- | --- | 0 | -- | --- | - | -- | --- | - |
| bags9f20 | 553 | AV915000 | not_full | ref|XM_483857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1163 | 77 | not_full | YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I Length = 219 | 54 | -- | --- | - | -- | --- | - |
| bags9f19 | 293 | AV833451 | not_full | dbj|AK066934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A09, full insert sequence Length = 2372 | 14 | not_full | ACO32_ARATH (Q9LMI7) Putative acyl-coenzyme A oxidase 3.2, peroxisomal precursor (EC 1.3.3.6) Length = 675 | 39 | -- | --- | - | -- | --- | - |
| bags9f17 | 596 | AV914999 | not_full | ref|XM_480163.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 | 114 | not_full | CHL1_ARATH (Q05085) Nitrate/chlorate transporter Length = 590 | 14 | -- | --- | - | -- | --- | - |
| bags9f16 | 653 | AV914998 | not_full | gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 | 128 | not_full | PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 | 77 | -- | --- | - | -- | --- | - |
| bags9f15 | 679 | AV914997 | not_full | ref|NM_188328.1| Oryza sativa (japonica cultivar-group), Ozsa8079 predicted mRNA Length = 2127 | 53 | full | DPOD3_MOUSE (Q9EQ28) DNA polymerase delta subunit 3 (DNA polymerase delta subunit p66) Length = 462 | 16 | -- | --- | - | -- | --- | - |
| bags9f11 | 625 | AV914996 | not_full | ref|XM_479287.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1863 | 95 | not_full | ANM3_HUMAN (O60678) Protein arginine N-methyltransferase 3 (EC 2.1.1.-) (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 3) Length = 531 | 331 | -- | --- | - | -- | --- | - |
| bags9f10 | 241 | AV914995 | not_full | dbj|AB055152.1| Triticum aestivum mrpl11 mRNA for mitochondrial ribosomal protein L11, complete cds Length = 956 | 16 | not_full | RM11_RECAM (O21234) Mitochondrial 60S ribosomal protein L11 Length = 145 | 232 | -- | --- | - | -- | --- | - |
| bags9f08 | 588 | AV914994 | not_full | emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA Length = 724 | 500 | not_full | NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP Cw-18) (PKG2316) Length = 115 | 77 | -- | --- | - | -- | --- | - |
| bags9f07 | 579 | AV914993 | not_full | dbj|AK100680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113J17, full insert sequence Length = 3348 | 38 | not_full | MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non muscle) Length = 2116 | 341 | -- | --- | - | -- | --- | - |
| bags9f06 | 523 | AV833450 | full | ref|XM_472569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1881 | 50 | not_full | Y1875_PYRHO (O59545) Hypothetical UPF0004 protein PH1875 Length = 425 | 58 | -- | --- | - | -- | --- | - |
| bags9f05 | 646 | AV914992 | not_full | dbj|AK105673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A09, full insert sequence Length = 1721 | 68 | not_full | YAA1_SCHPO (Q09795) Probable peptidase C22G7.01c (EC 3.4.-.-) Length = 598 | 31 | -- | --- | - | -- | --- | - |
| bags9f04 | 617 | AV914991 | not_full | gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 | 111 | not_full | RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 | 88 | -- | --- | - | -- | --- | - |
| bags9f03 | 621 | AV914990 | not_full | ref|XM_470874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2029 | 71 | not_full | PRP17_MOUSE (Q9DC48) Pre-mRNA-splicing factor PRP17 (Cell division cycle 40 homolog) Length = 579 | 427 | -- | --- | - | -- | --- | - |
| bags9f02 | 551 | AV914989 | full | emb|X80023.1|TTADPATP T.turgidum mRNA for ADP/ATP carrier Length = 1035 | 500 | full | ADT_ORYSA (P31691) ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP translocase) (Adenine nucleotide translocator) (ANT) Length = 382 | 146 | -- | --- | - | -- | --- | - |
| bags9f01 | 436 | AV914988 | not_full | ref|NM_188250.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 | 66 | not_full | C90D2_ORYSA (Q94IW5) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) Length = 490 | 500 | -- | --- | - | -- | --- | - |
| bags9e24 | 545 | AV833449 | not_full | dbj|AK064983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C13, full insert sequence Length = 2881 | 24 | not_full | EXOC5_ARATH (Q8RVQ5) Exocyst complex component 5 (Exocyst complex component Sec10) Length = 829 | 8 | -- | --- | - | -- | --- | - |
| bags9e23 | 466 | AV914987 | not_full | ref|XM_506873.1| PREDICTED Oryza sativa (japonica cultivar-group), B1215B07.34 mRNA Length = 1334 | 148 | not_full | ADK1_ARATH (Q9SF85) Adenosine kinase 1 (EC 2.7.1.20) (AK 1) (Adenosine 5NULL-phosphotransferase 1) Length = 344 | 56 | -- | --- | - | -- | --- | - |
| bags9e22 | 405 | AV833448 | not_full | ref|NM_191138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2295 | 61 | not_full | E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC3)-beta-glucan endohydrolase)3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 | 50 | -- | --- | - | -- | --- | - |
| bags9e21 | 472 | AV914986 | not_full | gb|AF494084.1| Nicotiana benthamiana SKP1 mRNA, complete cds Length = 462 | 28 | not_full | SKP1B_ARATH (Q9FHW7) SKP1-like protein 1B (SKP1-like 2) (UFO-binding protein 2) Length = 171 | 14 | -- | --- | - | -- | --- | - |
| bags9e20 | 556 | AV914985 | not_full | ref|XM_506873.1| PREDICTED Oryza sativa (japonica cultivar-group), B1215B07.34 mRNA Length = 1334 | 94 | not_full | ADK2_ARATH (Q9LZG0) Adenosine kinase 2 (EC 2.7.1.20) (AK 2) (Adenosine 5NULL-phosphotransferase 2) Length = 345 | 37 | -- | --- | - | -- | --- | - |
| bags9e19 | 568 | AV914984 | not_full | gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds Length = 820 | 283 | not_full | RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein) Length = 261 | 52 | -- | --- | - | -- | --- | - |
| bags9e16 | 679 | AV914983 | not_full | dbj|AK103570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132M15, full insert sequence Length = 1621 | 59 | not_full | ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1) (CAST1) Length = 957 | 7 | -- | --- | - | -- | --- | - |
| bags9e15 | 617 | AV914982 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 268 | not_full | L_VSVJH (P13615) Large structural protein (L protein) (Transcriptase) (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2109 | 1 | -- | --- | - | -- | --- | - |
| bags9e14 | 589 | AV914981 | not_full | gb|U83414.1|HVU83414 Hordeum vulgare cytosolic triosephosphate isomerase mRNA, complete cds Length = 1028 | 368 | full | TPIS_HORVU (P34937) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase) Length = 252 | 241 | -- | --- | - | -- | --- | - |
| bags9e12 | 625 | AV914980 | not_full | dbj|AK100596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106P10, full insert sequence Length = 2093 | 39 | not_full | C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-) Length = 576 | 398 | -- | --- | - | -- | --- | - |
| bags9e11 | 601 | AV833447 | not_full | dbj|AK070608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D15, full insert sequence Length = 2410 | 60 | not_full | CPSF2_ARATH (Q9LKF9) Cleavage and polyadenylation specificity factor, 100 kDa subunit (CPSF 100 kDa subunit) Length = 739 | 18 | -- | --- | - | -- | --- | - |
| bags9e08 | 557 | AV833446 | not_full | gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA, complete cds Length = 2105 | 58 | not_full | BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 | 24 | -- | --- | - | -- | --- | - |
| bags9e07 | 570 | AV914979 | not_full | gb|AY364467.1| Triticum monococcum cytosolic glutathione reductase (grc1) mRNA, complete cds Length = 1806 | 61 | not_full | GSHRC_ORYSA (P48642) Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase) Length = 496 | 173 | -- | --- | - | -- | --- | - |
| bags9e06 | 551 | AV914978 | not_full | gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 | 500 | not_full | PEAM1_ARATH (Q9FR44) Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1) Length = 491 | 79 | -- | --- | - | -- | --- | - |
| bags9e05 | 104 | AV914977 | not_full | gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA sequence Length = 1023 | 15 | not_full | MYRA_SINAL (P29736) Myrosinase MA1 (EC 3.2.1.147) (Sinigrinase) (Thioglucosidase) Length = 501 | 17 | -- | --- | - | -- | --- | - |
| bags9e03 | 508 | AV914976 | not_full | dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 | 88 | not_full | SPY_ARATH (Q96301) Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) Length = 914 | 35 | -- | --- | - | -- | --- | - |
| bags9e02 | 523 | AV914975 | not_full | emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate dehydrogenase Length = 1365 | 500 | not_full | G3PX_HORVU (P26517) Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12) Length = 337 | 262 | -- | --- | - | -- | --- | - |
| bags9e01 | 597 | AV914974 | not_full | gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 | 500 | not_full | H4_SILLA (Q76H85) Histone H4 Length = 102 | 135 | -- | --- | - | -- | --- | - |
| bags9d24 | 642 | AV914973 | not_full | gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 | 37 | not_full | OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol 3-O-methyltransferase 1) Length = 368 | 43 | -- | --- | - | -- | --- | - |
| bags9d23 | 600 | AV914972 | not_full | ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 | 82 | not_full | UMP3_ARATH (Q9LEV3) Protein At5g10860, mitochondrial precursor Length = 206 | 77 | -- | --- | - | -- | --- | - |
| bags9d22 | 475 | AV914971 | not_full | emb|Z21510.1|TATRINF4A T.aestivum translation initiation factor 4A Length = 1715 | 500 | not_full | IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-) (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 | 500 | -- | --- | - | -- | --- | - |
| bags9d21 | 669 | AV914970 | not_full | gb|AY108613.1| Zea mays PCO091786 mRNA sequence Length = 597 | 500 | not_full | VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) Length = 605 | 7 | -- | --- | - | -- | --- | - |
| bags9d20 | 147 | AV833445 | not_full | ref|XM_478753.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 | 148 | not_full | PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 | 13 | -- | --- | - | -- | --- | - |
| bags9d19 | 549 | AV833444 | not_full | ref|XM_470591.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 | 44 | not_full | RBBP5_HUMAN (Q15291) Retinoblastoma-binding protein 5 (RBBP-5) (Retinoblastoma-binding protein RBQ-3) Length = 538 | 49 | -- | --- | - | -- | --- | - |
| bags9d18 | 557 | AV914969 | not_full | dbj|AK104375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G04, full insert sequence Length = 1133 | 30 | not_full | CLPP2_SYNEL (Q8DJZ9) ATP-dependent Clp protease proteolytic subunit 2 (EC 3.4.21.92) (Endopeptidase Clp 2) Length = 198 | 349 | -- | --- | - | -- | --- | - |
| bags9d17 | 662 | AV914968 | not_full | gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 | 88 | not_full | CIR1A_MOUSE (Q8R2N2) Cirhin (Testis-expressed gene 292 protein) Length = 686 | 22 | -- | --- | - | -- | --- | - |
| bags9d16 | 523 | AV914967 | not_full | emb|X94193.1|PGHSP179 P.glaucum mRNA for heat shock protein, HSP 17.9 Length = 807 | 500 | not_full | HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3 Length = 161 | 115 | -- | --- | - | -- | --- | - |
| bags9d15 | 536 | AV914966 | not_full | gb|AF475122.1| Triticum aestivum ribosomal protein mRNA, partial cds Length = 366 | 500 | not_full | RL11_MEDSA (P46287) 60S ribosomal protein L11 (L5) Length = 181 | 233 | -- | --- | - | -- | --- | - |
| bags9d12 | 645 | AV914965 | not_full | gb|AF093505.1|AF093505 Saccharum hybrid cultivar H32-8560 polyubiquitin (ubi9) gene, complete cds Length = 5174 | 500 | not_full | UBIQ_WHEAT (P69326) Ubiquitin Length = 76 | 170 | -- | --- | - | -- | --- | - |
| bags9d11 | 655 | AV914964 | not_full | gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18, complete sequence Length = 172281 | 50 | not_full | CAS1_ARATH (P38605) Cycloartenol synthase (EC 5.4.99.8) (2,3-epoxysqualene--cycloartenol cyclase) Length = 759 | 12 | -- | --- | - | -- | --- | - |
| bags9d10 | 617 | AV914963 | not_full | ref|XM_476885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2259 | 500 | not_full | ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase domain 19) (Meltrin beta) (Metalloprotease and disintegrin dentritic antigen marker) (MADDAM) Length = 956 | 2 | -- | --- | - | -- | --- | - |
