Clone Name | bags9d20 |
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Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 42.4 bits (98), Expect(2) = 6e-08 Identities = 19/22 (86%), Positives = 19/22 (86%) Frame = +3 Query: 12 PRELTYLDLSHNRXRGTVPRXL 77 P ELTYLDLSHNR RGTVPR L Sbjct: 260 PPELTYLDLSHNRIRGTVPRSL 281 Score = 32.3 bits (72), Expect(2) = 6e-08 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +2 Query: 101 TLDLSYNCLCGPLPK 145 TLDLSYN LCGPLP+ Sbjct: 289 TLDLSYNRLCGPLPR 303
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 26.2 bits (56), Expect(2) = 1.6 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +3 Query: 12 PRELTYLDLSHNRXRGTVP 68 P LT LD++HN+ G++P Sbjct: 261 PTSLTSLDINHNKIYGSIP 279 Score = 22.7 bits (47), Expect(2) = 1.6 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +2 Query: 104 LDLSYNCLCGPLP 142 L++SYN LCG +P Sbjct: 290 LNVSYNRLCGQIP 302
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 29.3 bits (64), Expect = 3.1 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 83 RCPPCSTLDLSYNCLCGPLPK 145 +C T+DLS+N L GP+PK Sbjct: 424 KCKSLKTIDLSFNELTGPIPK 444
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 25.8 bits (55), Expect(2) = 3.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 21 LTYLDLSHNRXRGTVPRXLG 80 L LDLSHNR G +P +G Sbjct: 254 LQSLDLSHNRLTGWIPPEIG 273 Score = 21.6 bits (44), Expect(2) = 3.9 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +2 Query: 86 CPPCSTLDLSYNCLCGPLP 142 C +LDLS N + GP P Sbjct: 300 CSWLQSLDLSNNNISGPFP 318
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 24.6 bits (52), Expect(2) = 4.3 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +3 Query: 21 LTYLDLSHNRXRGTVPRXLGGA 86 L LDLSHN G +P L A Sbjct: 305 LVSLDLSHNSLSGRIPDSLSSA 326 Score = 22.7 bits (47), Expect(2) = 4.3 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +2 Query: 104 LDLSYNCLCGPLP 142 LD+S+N LCG +P Sbjct: 332 LDISHNKLCGRIP 344
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 24.3 bits (51), Expect(2) = 6.5 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +2 Query: 86 CPPCSTLDLSYNCLCGPLP 142 C +L LS+N L GPLP Sbjct: 281 CKSLKSLMLSFNSLSGPLP 299 Score = 22.3 bits (46), Expect(2) = 6.5 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = +3 Query: 6 SSPRELTYLDLSHNRXRGTVPRXLG 80 S + L LDLS+N + ++P+ G Sbjct: 231 SKLKHLAKLDLSYNPLKCSIPKSFG 255
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 24.3 bits (51), Expect(2) = 6.5 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = +3 Query: 6 SSPRELTYLDLSHNRXRGTVPRXL 77 S L LDLSHN G +P L Sbjct: 578 SGMTSLEVLDLSHNNLSGNIPPSL 601 Score = 22.3 bits (46), Expect(2) = 6.5 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 Query: 98 STLDLSYNCLCGPLP 142 ST ++YN L GP+P Sbjct: 608 STFSVAYNKLSGPIP 622
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 23.9 bits (50), Expect(2) = 8.4 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Frame = +2 Query: 89 PPCSTL---DLSYNCLCGPLPK 145 PP S L DLSYN L G LP+ Sbjct: 449 PPSSLLISVDLSYNDLTGQLPE 470 Score = 22.3 bits (46), Expect(2) = 8.4 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +3 Query: 3 SSSPRELTYLDLSHNRXRGTVP 68 S+ +T LDLS + +GT+P Sbjct: 401 SNGSSVITKLDLSSSNLKGTIP 422
>FBN1_HUMAN (P35555) Fibrillin-1 precursor| Length = 2871 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%) Frame = +2 Query: 80 RRCPP--CSTLDLSYNCLCGP 136 R+C P C LD SY C+C P Sbjct: 1982 RKCAPGTCQNLDGSYRCICPP 2002
>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)| Length = 2871 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%) Frame = +2 Query: 80 RRCPP--CSTLDLSYNCLCGP 136 R+C P C LD SY C+C P Sbjct: 1982 RKCAPGTCQNLDGSYRCICPP 2002
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 27.7 bits (60), Expect = 9.1 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = +3 Query: 21 LTYLDLSHNRXRGTVPRXLGGAVHPAV 101 + +LDLS+N+ G++P+ LG + ++ Sbjct: 665 MIFLDLSYNKLEGSIPKELGAMYYLSI 691
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 27.7 bits (60), Expect = 9.1 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = +3 Query: 21 LTYLDLSHNRXRGTVPRXLGGAVHPAV 101 + +LDLS+N+ G++P+ LG + ++ Sbjct: 665 MIFLDLSYNKLEGSIPKELGAMYYLSI 691
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 23.9 bits (50), Expect(2) = 9.1 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 12 PRELTYLDLSHNRXRGTVP 68 P+ L LDL+HN G +P Sbjct: 261 PKTLGILDLNHNGITGNIP 279 Score = 22.3 bits (46), Expect(2) = 9.1 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = +2 Query: 92 PCSTLDLSYNCLCGPLP 142 P ++SYN LCG +P Sbjct: 286 PLQFFNVSYNKLCGHIP 302 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.132 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,548,706 Number of Sequences: 219361 Number of extensions: 171433 Number of successful extensions: 643 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 643 length of database: 80,573,946 effective HSP length: 24 effective length of database: 75,309,282 effective search space used: 1807422768 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)