ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 42 6e-08
2PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg... 26 1.6
3BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 29 3.1
4BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 26 3.9
5DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 25 4.3
6EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 24 6.5
7PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11... 24 6.5
8NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.1... 24 8.4
9FBN1_HUMAN (P35555) Fibrillin-1 precursor 28 9.1
10FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340) 28 9.1
11BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11... 28 9.1
12BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precurso... 28 9.1
13PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor (Po... 24 9.1

>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score = 42.4 bits (98), Expect(2) = 6e-08
 Identities = 19/22 (86%), Positives = 19/22 (86%)
 Frame = +3

Query: 12  PRELTYLDLSHNRXRGTVPRXL 77
           P ELTYLDLSHNR RGTVPR L
Sbjct: 260 PPELTYLDLSHNRIRGTVPRSL 281



 Score = 32.3 bits (72), Expect(2) = 6e-08
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 101 TLDLSYNCLCGPLPK 145
           TLDLSYN LCGPLP+
Sbjct: 289 TLDLSYNRLCGPLPR 303



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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 26.2 bits (56), Expect(2) = 1.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 12  PRELTYLDLSHNRXRGTVP 68
           P  LT LD++HN+  G++P
Sbjct: 261 PTSLTSLDINHNKIYGSIP 279



 Score = 22.7 bits (47), Expect(2) = 1.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 104 LDLSYNCLCGPLP 142
           L++SYN LCG +P
Sbjct: 290 LNVSYNRLCGQIP 302



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 83  RCPPCSTLDLSYNCLCGPLPK 145
           +C    T+DLS+N L GP+PK
Sbjct: 424 KCKSLKTIDLSFNELTGPIPK 444



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 25.8 bits (55), Expect(2) = 3.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 21  LTYLDLSHNRXRGTVPRXLG 80
           L  LDLSHNR  G +P  +G
Sbjct: 254 LQSLDLSHNRLTGWIPPEIG 273



 Score = 21.6 bits (44), Expect(2) = 3.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 86  CPPCSTLDLSYNCLCGPLP 142
           C    +LDLS N + GP P
Sbjct: 300 CSWLQSLDLSNNNISGPFP 318



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 24.6 bits (52), Expect(2) = 4.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 21  LTYLDLSHNRXRGTVPRXLGGA 86
           L  LDLSHN   G +P  L  A
Sbjct: 305 LVSLDLSHNSLSGRIPDSLSSA 326



 Score = 22.7 bits (47), Expect(2) = 4.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 104 LDLSYNCLCGPLP 142
           LD+S+N LCG +P
Sbjct: 332 LDISHNKLCGRIP 344



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 24.3 bits (51), Expect(2) = 6.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 86  CPPCSTLDLSYNCLCGPLP 142
           C    +L LS+N L GPLP
Sbjct: 281 CKSLKSLMLSFNSLSGPLP 299



 Score = 22.3 bits (46), Expect(2) = 6.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 6   SSPRELTYLDLSHNRXRGTVPRXLG 80
           S  + L  LDLS+N  + ++P+  G
Sbjct: 231 SKLKHLAKLDLSYNPLKCSIPKSFG 255



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>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 24.3 bits (51), Expect(2) = 6.5
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 6   SSPRELTYLDLSHNRXRGTVPRXL 77
           S    L  LDLSHN   G +P  L
Sbjct: 578 SGMTSLEVLDLSHNNLSGNIPPSL 601



 Score = 22.3 bits (46), Expect(2) = 6.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 98  STLDLSYNCLCGPLP 142
           ST  ++YN L GP+P
Sbjct: 608 STFSVAYNKLSGPIP 622



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>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 23.9 bits (50), Expect(2) = 8.4
 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = +2

Query: 89  PPCSTL---DLSYNCLCGPLPK 145
           PP S L   DLSYN L G LP+
Sbjct: 449 PPSSLLISVDLSYNDLTGQLPE 470



 Score = 22.3 bits (46), Expect(2) = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 3   SSSPRELTYLDLSHNRXRGTVP 68
           S+    +T LDLS +  +GT+P
Sbjct: 401 SNGSSVITKLDLSSSNLKGTIP 422



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>FBN1_HUMAN (P35555) Fibrillin-1 precursor|
          Length = 2871

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = +2

Query: 80   RRCPP--CSTLDLSYNCLCGP 136
            R+C P  C  LD SY C+C P
Sbjct: 1982 RKCAPGTCQNLDGSYRCICPP 2002



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>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)|
          Length = 2871

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = +2

Query: 80   RRCPP--CSTLDLSYNCLCGP 136
            R+C P  C  LD SY C+C P
Sbjct: 1982 RKCAPGTCQNLDGSYRCICPP 2002



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>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)|
           (Brassinosteroid LRR receptor kinase)
          Length = 1207

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 21  LTYLDLSHNRXRGTVPRXLGGAVHPAV 101
           + +LDLS+N+  G++P+ LG   + ++
Sbjct: 665 MIFLDLSYNKLEGSIPKELGAMYYLSI 691



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>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC|
           2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1)
           (Systemin receptor SR160)
          Length = 1207

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +3

Query: 21  LTYLDLSHNRXRGTVPRXLGGAVHPAV 101
           + +LDLS+N+  G++P+ LG   + ++
Sbjct: 665 MIFLDLSYNKLEGSIPKELGAMYYLSI 691



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>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 330

 Score = 23.9 bits (50), Expect(2) = 9.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 12  PRELTYLDLSHNRXRGTVP 68
           P+ L  LDL+HN   G +P
Sbjct: 261 PKTLGILDLNHNGITGNIP 279



 Score = 22.3 bits (46), Expect(2) = 9.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 92  PCSTLDLSYNCLCGPLP 142
           P    ++SYN LCG +P
Sbjct: 286 PLQFFNVSYNKLCGHIP 302


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.132    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,548,706
Number of Sequences: 219361
Number of extensions: 171433
Number of successful extensions: 643
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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