Clone Name | bags9e16 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural pro... | 31 | 3.0 | 2 | ERC2_HUMAN (O15083) ERC protein 2 | 31 | 3.0 | 3 | CD19_MOUSE (P25918) B-lymphocyte antigen CD19 precursor (B-lymph... | 30 | 5.2 | 4 | BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231) | 30 | 6.7 | 5 | EFTS_SYNEL (Q8DIA3) Elongation factor Ts (EF-Ts) | 30 | 6.7 | 6 | IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2 | 30 | 8.8 | 7 | VU47_HHV6Z (P52549) Glycoprotein U47 precursor | 30 | 8.8 |
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>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1)| (CAST1) Length = 957 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/45 (28%), Positives = 29/45 (64%) Frame = +2 Query: 263 LPKLKI*SSHPRASKTRLERLKQHLSKNQPLILCQRLRLTSIPFQ 397 + ++++ SH + KT++++LKQ LSK + +L + +L ++ Q Sbjct: 419 IKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQ 463
>ERC2_HUMAN (O15083) ERC protein 2| Length = 957 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/45 (28%), Positives = 29/45 (64%) Frame = +2 Query: 263 LPKLKI*SSHPRASKTRLERLKQHLSKNQPLILCQRLRLTSIPFQ 397 + ++++ SH + KT++++LKQ LSK + +L + +L ++ Q Sbjct: 419 IKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQ 463
>CD19_MOUSE (P25918) B-lymphocyte antigen CD19 precursor (B-lymphocyte surface| antigen B4) (Leu-12) (Differentiation antigen CD19) Length = 547 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = -3 Query: 320 VPILSWMLEGENSISSAWVDGTLLLSDEHPGPSDDTFFILGELCNNSSLASEICVVERSS 141 V +LS L GE+ + WV G+LLL + + T++ L N ++ + V+ RS+ Sbjct: 221 VSLLSLSLGGEHPVREMWVWGSLLLLPQATALDEGTYYCLR---GNLTIERHVKVIARSA 277
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 259 PSTQAEDIEFSPSSIQDKIGTAEATSFQEPTPDPLPAAEADKHP 390 PS+ +E FSP K+G F TP P PA++ + P Sbjct: 1481 PSSPSESPTFSPG----KMGPRATAEFSTQTPSPAPASDMPRSP 1520
>EFTS_SYNEL (Q8DIA3) Elongation factor Ts (EF-Ts)| Length = 297 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 322 AEATSFQEPTPDPLPAAEADKHPISTSEPEIVDKSXXXXXXXXXXXXKNPG 474 A A + +EPTP+P+ AAE P+S E+V++ K+ G Sbjct: 242 AAAVTAEEPTPEPVAAAEQPAEPVS----ELVEQPGAESKGFGAATKKSGG 288
>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2| Length = 945 Score = 29.6 bits (65), Expect = 8.8 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 13/107 (12%) Frame = +1 Query: 130 KEDAELLSTTQISEAREELLQSSPRMKNVXXXXXXXXXXXXNVPSTQAED---------I 282 K+ +E+ +T S R +Q R K V ++ S Q E+ I Sbjct: 68 KQTSEIRATD--SSGRARTVQVEVRKKRVFMKRDEVSAETGSLESAQIEEETAGLPMGEI 125 Query: 283 EFSPS--SIQDKIGTA--EATSFQEPTPDPLPAAEADKHPISTSEPE 411 E +P +I + + A E +EP P+P P E + P EPE Sbjct: 126 EPTPEPENIVEPVAEAIPEPEPVREPEPEPEPIVEPEPEPEPEPEPE 172
>VU47_HHV6Z (P52549) Glycoprotein U47 precursor| Length = 738 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/77 (23%), Positives = 31/77 (40%) Frame = +1 Query: 145 LLSTTQISEAREELLQSSPRMKNVXXXXXXXXXXXXNVPSTQAEDIEFSPSSIQDKIGTA 324 L +TT + ++ + SP+ NV ++ +T +PSS I + Sbjct: 199 LYNTTSCIRSNDQYFEHSPKPINVTTSFGRAIVNFHSILTTTPSS---TPSSTSASITSP 255 Query: 325 EATSFQEPTPDPLPAAE 375 S PTP+P P + Sbjct: 256 HIPSTNTPTPEPSPVTK 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,138,729 Number of Sequences: 219361 Number of extensions: 1864102 Number of successful extensions: 5152 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5084 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)